Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0011654

Physical Location & Seq

Genomic Coordinates Reverse (-)

11706207 .. 11709007

Gene Structure 2801 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGCAAGTAACAAGAAATGGATATAGGCAGAAAATGTCAATCTATGATTTACTGCCTGGTGATATTGTGCATCTTTCTATTGGAGACCAGGTGCCAGCAGATGGGCTATTCGTATCAGGATTCTCCGTGTTGATTGACGAATCAAGCTTAACTGGTGAGAGTGAGCCAATAATGGTAACTGCTGAAAACCCTTTTCTTCTTTCCGGCACTAAGGTCCAAGACGGATCATGCAAGATGATGGTTACAACAGTTGGGATGAGAACCCAATGGGGTAAATTGATGGCGACTCTGAGCGAAGGAGGAGATGATGAAACCCCATTGCAGGTGAAGTTGAATGGAGTGGCAACCATTATTGGAAAGATAGGACTTTTCTTCGCCGTCGTGACTTTTGCAGTTATGATGCAAGGATTGTTTAGTCGAAAACTGGCTGAGGGGACACACTGGAGATGGAATGGAGATGATGCAAAGCAGATGTTGGAATTCTTTGCTATTGCAGTAACAATTGTTGTTGTTGCTGTCCCGGAGGGGCTGCCGCTGTCTGTGACATTGAGCCTTGCCTTTGCCATGAAGAAGATGATGAACGATAAAGCACTCGTTCGTCATCTCGCAGCTTGTGAGACTATGGGATCAGCCACAAACATTTGCAGTGACAAAACCGGGACACTAACAACCAACCGCATGACCGTTGTGAAATCTTGCATTTGCATGAATGTCAAGGAGGTGAGTAAACCCAATGAGGCCTCTAGCTTGTTCTCTGATCTTCCGGAGTCTGCTAGGAAACTTTTGGTACAATCGATCTTTAACAACACCGGTGGAGAAGTTGTGGTTAACAAAGCCGGAAAGCATGAGCTATTGGGAACACCTACAGATACTGCTTTGTTGGAATTTGGATTGTCAATTGGTGGAAATTTCCAAGCAGAGAGACAAGCTTCTAAACTTGTTAAAGTTGAGCCATTCAACTCAACGAAGAAACGGATGGGGGTAATCTTGGAGCTTCCTGAAGGAGGTTTGATAGCGCACACCAAAGGTGCCTCCGAAGTAGTTCTGGCCAGCTGCGAAAAGGTGATCAACTCAAATGGTGAAATTGTTCCCCTTGATGAAGCATCCCTCAACCATCTCAAAGTTACTATTGAGCAGTTTGCTTGCGAGGCTCTTCGAACTCTATGTCTTGCGTATACAGAACTAGGTACTGGTTTCTCTCCTGAGAATCCCATTCCTGTTTCTGGTTATACCTGTATAGGAATTGTGGGAATTAAGGATCCTGTTCGTCCCGGTGTCAAGGAGTCTGTTGCAATCTGCCGTTCAGCGGGCATCACAGTAAGAATGGTCACCGGAGACAATATAAATACTGCAAAGGCTATCGCAAGGGAATGTGGGATTCTTACCGATGATGGCATAGCCATTGAAGGTCCGGAGTTCAGGGAGAAGAATCAGGAAGAATTGCTTTCTCTGATTCCTAAAATTCAGGTGATGGCTCGATCTTCACCTCTGGACAAGCATACACTGGTGAAGCACTTGCGGACCACATTTGATGAAGTTGTTGCTGTAACCGGTGATGGAACAAATGATGCCCCAGCGCTTCATGAGGCAGATATTGGACTAGCCATGGGGATTGCTGGAACTGAGGTGGCTAAAGAGAGTGCTGATGTTATAATTCTGGACGATAATTTCTCAACAATCGTGACAGTGGCAAAATGGGGACGCTCGGTTTACATCAACATTCAAAAATTTGTGCAGTTCCAGCTGACTGTCAATATCGTTGCATTGATCGTGAACTTCTCCTCGGCTTGCTTGACAGGGAGTGCTCCTCTCACAGCTGTGCAGCTATTGTGGGTCAACATGATCATGGACACGTTAGGCGCCCTTGCACTTGCAACTGAGCCTCCGAATAATGACCTAATGAAGCATCCGCCGGTTGGAAAGAGACAGAATTTTATCAACAATGTAATGTGGAGGAACATTTTAGGGCAGTCTTTATATCAGTTTACGGTGATTTGGTTCCTTCAGGCAAAAGGAGAAGCAATGTTTGGTCTATACGGACCAGATTCTCATGTGATCCTCAACACTCTGATTTTCAACACATTTGTGTTTTGTCAGGTTTTCAACGAGATTAGCTCGCGCAACATGGAGGAAATAGATGTCTTCAAGGGCATATTGGATAACTATGTCTTCGTCGGAGTCCTCAGTTCCACAGTTGTGTTCCAAATCGTTATTATCGAGTTCCTGGGAAAATTTGCAAGCACAGCACCGCTCACCTTGACACAATGGTTTGCCACTGTATTCATCGGATTTTTAGGGATGCCGATTGCTGCTGGTTTAAAGATGTTTCCTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0008150 GO:0008324 GO:0009555 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042175 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

779

Amino Acids

84.22

Weight (kDa)

5.44

Isoelectric Point (pI)

33.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	2 - 96	3e-21	P-type ATPase actuator domain
Cation_ATPase	PF13246	267 - 424	8.5e-33	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	411 - 531	1.2e-11	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	602 - 776	1.5e-42	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22950 AT4G37640
fragaria_vesca	FvH4_1g17620
malus_domestica	MD02G1185000.v1.1 MD15G1296400.v1.1
prunus_persica	Prupe.6G221800_v2.0.a1 Prupe.6G221800_v2.0.a1
pyrus_communis	pycom02g14990 pycom15g25970
rosa_chinensis	RchiOBHm_Chr2g0107911
rosa_laevigata	RLG00000017627
rosa_multiflora	Rmu_sc0001484.1_g000032
rosa_roxburghii	Rroxscaffold_2G00135800
rosa_rugosa	Rorug02G0148700 Rorug02G0148800 Rorug02G0148800
rosa_samantha	Rh2BG210900 Rh2CG202700
rosa_wichuraiana	Rw2G015710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1652
AarI	CACCTGC	1 cut(s)	313
Acc36I	ACCTGC	1 cut(s)	313
AccB1I	GGYRCC	3 cut(s)	91, 1028, 1859
AccB7I	CCANNNNNTGG	1 cut(s)	101
AccBSI	CCGCTC	1 cut(s)	2251
AccI	GTMKAC	1 cut(s)	1175
AccII	CGCG	1 cut(s)	2119
AccIII	TCCGGA	2 cut(s)	763, 1411
AciI	CCGC	6 cut(s)	533, 676, 1307, 1519, 1910, 2249
AclWI	GGATC	5 cut(s)	232, 634, 1253, 1266, 2050
AcoI	YGGCCR	1 cut(s)	1047
AcsI	RAATTY	7 cut(s)	479, 884, 907, 1461, 1727, 1930, 2231
AcuI	CTGAAG	2 cut(s)	1020, 1988
AcyI	GRCGYC	1 cut(s)	1860
AfaI	GTAC	2 cut(s)	789, 1189
AfeI	AGCGCT	1 cut(s)	1578
AfiI	CCNNNNNNNGG	6 cut(s)	101, 322, 1004, 1223, 1306, 1916
AflIII	ACRYGT	1 cut(s)	1851
AgeI	ACCGGT	2 cut(s)	809, 1550
AgsI	TTSAA	7 cut(s)	334, 958, 1406, 1724, 2077, 2104, 2146
AjnI	CCWGG	3 cut(s)	55, 87, 2223
AjuI	GAANNNNNNNTTGG	2 cut(s)	2010, 2042
AleI	CACNNNNGTG	3 cut(s)	1817, 2084, 2195
Alw21I	GWGCWC	1 cut(s)	1807
Alw26I	GTCTC	5 cut(s)	78, 611, 916, 1329, 1918
AlwI	GGATC	5 cut(s)	232, 634, 1253, 1266, 2050
AlwNI	CAGNNNCTG	1 cut(s)	872
Aor13HI	TCCGGA	2 cut(s)	763, 1411
Aor51HI	AGCGCT	1 cut(s)	1578
AoxI	GGCC	2 cut(s)	738, 1047
ApeKI	GCWGC	5 cut(s)	529, 608, 1053, 1822, 2309
ApoI	RAATTY	7 cut(s)	479, 884, 907, 1461, 1727, 1930, 2231
ArsI	GACNNNNNNTTYG	2 cut(s)	1150, 1182
AsiGI	ACCGGT	2 cut(s)	809, 1550
Asp700I	GAANNNNTTC	2 cut(s)	1041, 1086
AspLEI	GCGC	4 cut(s)	1018, 1579, 1862, 2121
AspS9I	GGNCC	4 cut(s)	214, 1409, 1521, 2039
AsuC2I	CCSGG	3 cut(s)	521, 658, 1272
AsuII	TTCGAA	1 cut(s)	1156
AvaII	GGWCC	4 cut(s)	214, 1409, 1521, 2039
BalI	TGGCCA	1 cut(s)	1049
BamHI	GGATCC	1 cut(s)	1258
BanI	GGYRCC	3 cut(s)	91, 1028, 1859
BbsI	GAAGAC	2 cut(s)	2134, 2161
Bbv12I	GWGCWC	1 cut(s)	1807
BbvCI	CCTCAGC	1 cut(s)	429
BbvI	GCAGC	5 cut(s)	516, 620, 1040, 1834, 2296
BccI	CCATC	9 cut(s)	95, 232, 274, 441, 970, 1122, 1385, 1465, 1550
BceAI	ACGGC	2 cut(s)	362, 1284
BciT130I	CCWGG	3 cut(s)	57, 89, 2225
BclI	TGATCA	2 cut(s)	1065, 1842
BcnI	CCSGG	3 cut(s)	521, 658, 1272
BcoDI	GTCTC	5 cut(s)	78, 611, 916, 1329, 1918
BfaI	CTAG	4 cut(s)	744, 774, 1184, 1601
BfmI	CTRYAG	1 cut(s)	864
BfoI	RGCGCY	2 cut(s)	1580, 1863
BfuAI	ACCTGC	1 cut(s)	313
BisI	GCNGC	6 cut(s)	530, 533, 609, 1054, 1823, 2310
BlsI	GCNGC	6 cut(s)	531, 534, 610, 1055, 1824, 2311
Bme1390I	CCNGG	6 cut(s)	57, 89, 521, 658, 1272, 2225
Bme18I	GGWCC	4 cut(s)	214, 1409, 1521, 2039
BmgT120I	GGNCC	4 cut(s)	214, 1409, 1521, 2039
BmiI	GGNNCC	5 cut(s)	93, 1030, 1260, 1861, 2000
BmrFI	CCNGG	6 cut(s)	57, 89, 521, 658, 1272, 2225
BmsI	GCATC	8 cut(s)	79, 390, 451, 1112, 1320, 1558, 1915, 2289
BpiI	GAAGAC	2 cut(s)	2134, 2161
BplI	GAGNNNNNCTC	4 cut(s)	1792, 1824, 2099, 2131
BpmI	CTGGAG	1 cut(s)	463
Bpu10I	CCTNAGC	1 cut(s)	429
Bpu14I	TTCGAA	1 cut(s)	1156
BpuMI	CCSGG	3 cut(s)	521, 658, 1272
Bsa29I	ATCGAT	1 cut(s)	794
BsaHI	GRCGYC	1 cut(s)	1860
BsaI	GGTCTC	1 cut(s)	78
BsaJI	CCNNGG	3 cut(s)	1605, 1782, 2224
BsaWI	WCCGGW	5 cut(s)	763, 809, 1331, 1411, 1550
BsaXI	ACNNNNNCTCC	6 cut(s)	75, 105, 807, 837, 1867, 1897
Bsc4I	CCNNNNNNNGG	6 cut(s)	101, 322, 1004, 1223, 1306, 1916
Bse118I	RCCGGY	3 cut(s)	809, 1550, 1912
Bse1I	ACTGG	5 cut(s)	157, 429, 446, 1195, 1509
Bse3DI	GCAATG	2 cut(s)	317, 2028
BseAI	TCCGGA	2 cut(s)	763, 1411
BseBI	CCWGG	3 cut(s)	57, 89, 2225
BseCI	ATCGAT	1 cut(s)	794
BseDI	CCNNGG	3 cut(s)	1605, 1782, 2224
BseGI	GGATG	5 cut(s)	261, 981, 1103, 1906, 2304
BseLI	CCNNNNNNNGG	6 cut(s)	101, 322, 1004, 1223, 1306, 1916
BseMI	GCAATG	2 cut(s)	317, 2028
BseMII	CTCAG	6 cut(s)	281, 420, 1194, 1614, 1869, 2197
BseNI	ACTGG	5 cut(s)	157, 429, 446, 1195, 1509
BseRI	GAGGAG	3 cut(s)	315, 1771, 1797
BseXI	GCAGC	5 cut(s)	516, 620, 1040, 1834, 2296
BseYI	CCCAGC	1 cut(s)	1573
BsgI	GTGCAG	2 cut(s)	1754, 1841
Bsh1236I	CGCG	1 cut(s)	2119
BshFI	GGCC	2 cut(s)	740, 1049
BshNI	GGYRCC	3 cut(s)	91, 1028, 1859
BshTI	ACCGGT	2 cut(s)	809, 1550
BshVI	ATCGAT	1 cut(s)	794
BsiHKAI	GWGCWC	1 cut(s)	1807
BslFI	GGGAC	5 cut(s)	448, 503, 673, 1254, 1713
BslI	CCNNNNNNNGG	6 cut(s)	101, 322, 1004, 1223, 1306, 1916
BsmAI	GTCTC	5 cut(s)	78, 611, 916, 1329, 1918
BsmFI	GGGAC	5 cut(s)	448, 503, 673, 1254, 1713
BsnI	GGCC	2 cut(s)	740, 1049
Bso31I	GGTCTC	1 cut(s)	78
Bsp119I	TTCGAA	1 cut(s)	1156
Bsp1286I	GDGCHC	1 cut(s)	1807
Bsp13I	TCCGGA	2 cut(s)	763, 1411
Bsp19I	CCATGG	1 cut(s)	1605
BspACI	CCGC	6 cut(s)	533, 676, 1307, 1519, 1910, 2249
BspANI	GGCC	2 cut(s)	740, 1049
BspCNI	CTCAG	6 cut(s)	282, 421, 1195, 1615, 1870, 2196
BspDI	ATCGAT	1 cut(s)	794
BspEI	TCCGGA	2 cut(s)	763, 1411
BspFNI	CGCG	1 cut(s)	2119
BspHI	TCATGA	1 cut(s)	1582
BspLI	GGNNCC	5 cut(s)	93, 1030, 1260, 1861, 2000
BspMI	ACCTGC	1 cut(s)	313
BspPI	GGATC	5 cut(s)	232, 634, 1253, 1266, 2050
BspQI	GCTCTTC	1 cut(s)	1158
BspT104I	TTCGAA	1 cut(s)	1156
BspT107I	GGYRCC	3 cut(s)	91, 1028, 1859
BspTNI	GGTCTC	1 cut(s)	78
BsrBI	CCGCTC	1 cut(s)	2251
BsrDI	GCAATG	2 cut(s)	317, 2028
BsrFI	RCCGGY	3 cut(s)	809, 1550, 1912
BsrI	ACTGG	5 cut(s)	157, 429, 446, 1195, 1509
BssAI	RCCGGY	3 cut(s)	809, 1550, 1912
BssECI	CCNNGG	3 cut(s)	1605, 1782, 2224
BssNAI	GTATAC	1 cut(s)	1176
BssNI	GRCGYC	1 cut(s)	1860
BssT1I	CCWWGG	1 cut(s)	1605
Bst1107I	GTATAC	1 cut(s)	1176
Bst2UI	CCWGG	3 cut(s)	57, 89, 2225
Bst4CI	ACNGT	8 cut(s)	250, 685, 1318, 1687, 1750, 1990, 2194, 2278
Bst6I	CTCTTC	1 cut(s)	1158
BstACI	GRCGYC	1 cut(s)	1860
BstBI	TTCGAA	1 cut(s)	1156
BstC8I	GCNNGC	7 cut(s)	96, 1051, 1144, 1309, 1789, 2117, 2239
BstDEI	CTNAG	7 cut(s)	210, 290, 429, 1203, 1623, 1878, 2183
BstDSI	CCRYGG	1 cut(s)	1605
BstEII	GGTNACC	1 cut(s)	1327
BstENI	CCTNNNNNAGG	1 cut(s)	1002
BstF5I	GGATG	5 cut(s)	261, 981, 1103, 1906, 2304
BstFNI	CGCG	1 cut(s)	2119
BstH2I	RGCGCY	2 cut(s)	1580, 1863
BstHHI	GCGC	4 cut(s)	1018, 1579, 1862, 2121
BstMAI	GTCTC	5 cut(s)	78, 611, 916, 1329, 1918
BstMWI	GCNNNNNNNGC	3 cut(s)	1148, 1741, 2243
BstNI	CCWGG	3 cut(s)	57, 89, 2225
BstPI	GGTNACC	1 cut(s)	1327
BstSCI	CCNGG	6 cut(s)	55, 87, 519, 656, 1270, 2223
BstSFI	CTRYAG	1 cut(s)	864
BstUI	CGCG	1 cut(s)	2119
BstV1I	GCAGC	5 cut(s)	516, 620, 1040, 1834, 2296
BstV2I	GAAGAC	2 cut(s)	2134, 2161
BstX2I	RGATCY	1 cut(s)	1258
BstYI	RGATCY	1 cut(s)	1258
BstZ17I	GTATAC	1 cut(s)	1176
Bsu15I	ATCGAT	1 cut(s)	794
BsuRI	GGCC	2 cut(s)	740, 1049
BsuTUI	ATCGAT	1 cut(s)	794
BtgI	CCRYGG	1 cut(s)	1605
BtsCI	GGATG	5 cut(s)	261, 981, 1103, 1906, 2304
BtsI	GCAGTG	1 cut(s)	652
BtsIMutI	CAGTG	5 cut(s)	439, 652, 1502, 1692, 2274
BveI	ACCTGC	1 cut(s)	313
Cac8I	GCNNGC	7 cut(s)	96, 1051, 1144, 1309, 1789, 2117, 2239
CaiI	CAGNNNCTG	1 cut(s)	872
CciI	TCATGA	1 cut(s)	1582
CfoI	GCGC	4 cut(s)	1018, 1579, 1862, 2121
Cfr10I	RCCGGY	3 cut(s)	809, 1550, 1912
Cfr13I	GGNCC	4 cut(s)	214, 1409, 1521, 2039
ClaI	ATCGAT	1 cut(s)	794
CseI	GACGC	1 cut(s)	1710
CsiI	ACCWGGT	1 cut(s)	87
Csp6I	GTAC	2 cut(s)	788, 1188
CspAI	ACCGGT	2 cut(s)	809, 1550
CspCI	CAANNNNNGTGG	2 cut(s)	793, 828
CviQI	GTAC	2 cut(s)	788, 1188
DdeI	CTNAG	7 cut(s)	210, 290, 429, 1203, 1623, 1878, 2183
DinI	GGCGCC	1 cut(s)	1861
DraI	TTTAAA	1 cut(s)	2319
EaeI	YGGCCR	1 cut(s)	1047
Eam1104I	CTCTTC	1 cut(s)	1158
EarI	CTCTTC	1 cut(s)	1158
EciI	GGCGGA	1 cut(s)	1899
Eco130I	CCWWGG	1 cut(s)	1605
Eco147I	AGGCCT	1 cut(s)	740
Eco31I	GGTCTC	1 cut(s)	78
Eco47I	GGWCC	4 cut(s)	214, 1409, 1521, 2039
Eco47III	AGCGCT	1 cut(s)	1578
Eco57I	CTGAAG	2 cut(s)	1020, 1988
Eco91I	GGTNACC	1 cut(s)	1327
EcoNI	CCTNNNNNAGG	1 cut(s)	1002
EcoO65I	GGTNACC	1 cut(s)	1327
EcoRI	GAATTC	1 cut(s)	479
EcoRII	CCWGG	3 cut(s)	55, 87, 2223
EcoT14I	CCWWGG	1 cut(s)	1605
EgeI	GGCGCC	1 cut(s)	1861
EheI	GGCGCC	1 cut(s)	1861
ErhI	CCWWGG	1 cut(s)	1605
FalI	AAGNNNNNCTT	2 cut(s)	1428, 1460
FaqI	GGGAC	5 cut(s)	448, 503, 673, 1254, 1713
FauI	CCCGC	1 cut(s)	1300
FbaI	TGATCA	2 cut(s)	1065, 1842
FblI	GTMKAC	1 cut(s)	1175
Fnu4HI	GCNGC	6 cut(s)	530, 533, 609, 1054, 1823, 2310
FokI	GGATG	5 cut(s)	268, 988, 1090, 1893, 2311
Fsp4HI	GCNGC	6 cut(s)	530, 533, 609, 1054, 1823, 2310
FspBI	CTAG	4 cut(s)	744, 774, 1184, 1601
GlaI	GCGC	4 cut(s)	1017, 1578, 1861, 2120
GluI	GCNGC	6 cut(s)	530, 533, 609, 1054, 1823, 2310
GsaI	CCCAGC	1 cut(s)	1577
GsuI	CTGGAG	1 cut(s)	463
HaeII	RGCGCY	2 cut(s)	1580, 1863
HaeIII	GGCC	2 cut(s)	740, 1049
HgaI	GACGC	1 cut(s)	1710
HhaI	GCGC	4 cut(s)	1018, 1579, 1862, 2121
Hin1I	GRCGYC	1 cut(s)	1860
Hin6I	GCGC	4 cut(s)	1016, 1577, 1860, 2119
HinP1I	GCGC	4 cut(s)	1016, 1577, 1860, 2119
HincII	GTYRAC	2 cut(s)	829, 1837
HindII	GTYRAC	2 cut(s)	829, 1837
HindIII	AAGCTT	2 cut(s)	145, 927
HpaI	GTTAAC	1 cut(s)	829
Hpy166II	GTNNAC	7 cut(s)	728, 829, 1176, 1711, 1774, 1837, 1986
Hpy188I	TCNGA	8 cut(s)	291, 757, 1036, 1452, 1887, 2070, 2177, 2288
Hpy8I	GTNNAC	7 cut(s)	728, 829, 1176, 1711, 1774, 1837, 1986
Hpy99I	CGWCG	2 cut(s)	383, 2177
HpyAV	CCTTC	4 cut(s)	290, 995, 1400, 2012
HpyCH4III	ACNGT	8 cut(s)	250, 685, 1318, 1687, 1750, 1990, 2194, 2278
HpyCH4IV	ACGT	1 cut(s)	1853
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1148, 1741, 2243
HpyF3I	CTNAG	7 cut(s)	210, 290, 429, 1203, 1623, 1878, 2183
HpySE526I	ACGT	1 cut(s)	1853
Hsp92I	GRCGYC	1 cut(s)	1860
HspAI	GCGC	4 cut(s)	1016, 1577, 1860, 2119
KasI	GGCGCC	1 cut(s)	1859
Kpn2I	TCCGGA	2 cut(s)	763, 1411
Ksp22I	TGATCA	2 cut(s)	1065, 1842
KspAI	GTTAAC	1 cut(s)	829
LguI	GCTCTTC	1 cut(s)	1158
LmnI	GCTCC	2 cut(s)	991, 1810
Lsp1109I	GCAGC	5 cut(s)	516, 620, 1040, 1834, 2296
LweI	GCATC	8 cut(s)	79, 390, 451, 1112, 1320, 1558, 1915, 2289
MabI	ACCWGGT	1 cut(s)	87
MaeI	CTAG	4 cut(s)	744, 774, 1184, 1601
MaeII	ACGT	1 cut(s)	1853
MbiI	CCGCTC	1 cut(s)	2251
MfeI	CAATTG	2 cut(s)	501, 897
MflI	RGATCY	1 cut(s)	1258
MhlI	GDGCHC	1 cut(s)	1807
MlsI	TGGCCA	1 cut(s)	1049
MluNI	TGGCCA	1 cut(s)	1049
Mly113I	GGCGCC	1 cut(s)	1860
MlyI	GAGTC	4 cut(s)	280, 776, 1292, 2187
MmeI	TCCRAC	4 cut(s)	456, 861, 1897, 2155
Mox20I	TGGCCA	1 cut(s)	1049
MroI	TCCGGA	2 cut(s)	763, 1411
MroXI	GAANNNNTTC	2 cut(s)	1041, 1086
MscI	TGGCCA	1 cut(s)	1049
MseI	TTAA	6 cut(s)	149, 801, 828, 942, 1254, 2318
MslI	CAYNNNNRTG	5 cut(s)	704, 1817, 1844, 2084, 2195
Msp20I	TGGCCA	1 cut(s)	1049
MspA1I	CMGCKG	5 cut(s)	535, 1053, 1307, 1744, 1817
MspR9I	CCNGG	6 cut(s)	57, 89, 521, 658, 1272, 2225
MunI	CAATTG	2 cut(s)	501, 897
MvaI	CCWGG	3 cut(s)	57, 89, 2225
MvnI	CGCG	1 cut(s)	2119
MwoI	GCNNNNNNNGC	3 cut(s)	1148, 1741, 2243
NarI	GGCGCC	1 cut(s)	1860
NciI	CCSGG	3 cut(s)	521, 658, 1272
NcoI	CCATGG	1 cut(s)	1605
NlaIV	GGNNCC	5 cut(s)	93, 1030, 1260, 1861, 2000
NmeAIII	GCCGAG	1 cut(s)	1763
NmuCI	GTSAC	5 cut(s)	382, 541, 647, 1327, 1681
NspV	TTCGAA	1 cut(s)	1156
OliI	CACNNNNGTG	3 cut(s)	1817, 2084, 2195
PagI	TCATGA	1 cut(s)	1582
PaqCI	CACCTGC	1 cut(s)	313
PceI	AGGCCT	1 cut(s)	740
PciSI	GCTCTTC	1 cut(s)	1158
PcsI	WCGNNNNNNNCGW	1 cut(s)	2214
PdmI	GAANNNNTTC	2 cut(s)	1041, 1086
PfeI	GAWTC	7 cut(s)	120, 140, 1207, 1378, 1429, 1453, 2045
PflMI	CCANNNNNTGG	1 cut(s)	101
PfoI	TCCNGGA	1 cut(s)	519
PinAI	ACCGGT	2 cut(s)	809, 1550
PkrI	GCNGC	6 cut(s)	531, 534, 610, 1055, 1824, 2311
PleI	GAGTC	4 cut(s)	280, 775, 1291, 2186
PluTI	GGCGCC	1 cut(s)	1863
PpsI	GAGTC	4 cut(s)	280, 775, 1291, 2186
PsiI	TTATAA	1 cut(s)	1652
Psp6I	CCWGG	3 cut(s)	55, 87, 2223
PspEI	GGTNACC	1 cut(s)	1327
PspFI	CCCAGC	1 cut(s)	1573
PspGI	CCWGG	3 cut(s)	55, 87, 2223
PspN4I	GGNNCC	5 cut(s)	93, 1030, 1260, 1861, 2000
PspPI	GGNCC	4 cut(s)	214, 1409, 1521, 2039
PstNI	CAGNNNCTG	1 cut(s)	872
PsuI	RGATCY	1 cut(s)	1258
PvuII	CAGCTG	3 cut(s)	1053, 1744, 1817
RsaI	GTAC	2 cut(s)	789, 1189
RsaNI	GTAC	2 cut(s)	788, 1188
RseI	CAYNNNNRTG	5 cut(s)	704, 1817, 1844, 2084, 2195
SapI	GCTCTTC	1 cut(s)	1158
SaqAI	TTAA	6 cut(s)	149, 801, 828, 942, 1254, 2318
SatI	GCNGC	6 cut(s)	530, 533, 609, 1054, 1823, 2310
Sau96I	GGNCC	4 cut(s)	214, 1409, 1521, 2039
SchI	GAGTC	4 cut(s)	280, 776, 1292, 2187
ScrFI	CCNGG	6 cut(s)	57, 89, 521, 658, 1272, 2225
SduI	GDGCHC	1 cut(s)	1807
SexAI	ACCWGGT	1 cut(s)	87
SfaNI	GCATC	8 cut(s)	79, 390, 451, 1112, 1320, 1558, 1915, 2289
SfcI	CTRYAG	1 cut(s)	864
SfoI	GGCGCC	1 cut(s)	1861
SfuI	TTCGAA	1 cut(s)	1156
SgrAI	CRCCGGYG	1 cut(s)	809
SinI	GGWCC	4 cut(s)	214, 1409, 1521, 2039
SmiMI	CAYNNNNRTG	5 cut(s)	704, 1817, 1844, 2084, 2195
SseBI	AGGCCT	1 cut(s)	740
SsiI	CCGC	6 cut(s)	533, 676, 1307, 1519, 1910, 2249
SspDI	GGCGCC	1 cut(s)	1859
SspMI	CTAG	4 cut(s)	744, 774, 1184, 1601
StuI	AGGCCT	1 cut(s)	740
StyD4I	CCNGG	6 cut(s)	55, 87, 519, 656, 1270, 2223
StyI	CCWWGG	1 cut(s)	1605
TaaI	ACNGT	8 cut(s)	250, 685, 1318, 1687, 1750, 1990, 2194, 2278
TaiI	ACGT	1 cut(s)	1856
TaqI	TCGA	5 cut(s)	418, 794, 1156, 1477, 2217
TauI	GCSGC	1 cut(s)	535
TfiI	GAWTC	7 cut(s)	120, 140, 1207, 1378, 1429, 1453, 2045
Tru1I	TTAA	6 cut(s)	149, 801, 828, 942, 1254, 2318
Tru9I	TTAA	6 cut(s)	149, 801, 828, 942, 1254, 2318
TscAI	CASTG	5 cut(s)	446, 652, 1509, 1692, 2281
TseFI	GTSAC	5 cut(s)	382, 541, 647, 1327, 1681
TseI	GCWGC	5 cut(s)	529, 608, 1053, 1822, 2309
Tsp45I	GTSAC	5 cut(s)	382, 541, 647, 1327, 1681
TspDTI	ATGAA	9 cut(s)	324, 581, 593, 722, 1113, 1548, 1571, 1916, 2272
TspGWI	ACGGA	4 cut(s)	115, 237, 988, 2052
TspRI	CASTG	5 cut(s)	446, 652, 1509, 1692, 2281
Van91I	CCANNNNNTGG	1 cut(s)	101
VpaK11BI	GGWCC	4 cut(s)	214, 1409, 1521, 2039
XagI	CCTNNNNNAGG	1 cut(s)	1002
XapI	RAATTY	7 cut(s)	479, 884, 907, 1461, 1727, 1930, 2231
XmiI	GTMKAC	1 cut(s)	1175
XmnI	GAANNNNTTC	2 cut(s)	1041, 1086
XspI	CTAG	4 cut(s)	744, 774, 1184, 1601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.