Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001484.1

Orthogroup ID

OG0011654

Physical Location & Seq

Genomic Coordinates Forward (+)

139824 .. 144906

Gene Structure 5083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001484.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3660 bp

atggagagttatttgcaagagaactttggggaagtgaaggctaagggctcgtctgaagaaacgttgcagaaatggaggaagctctgtggagttgtcaagaacccgaaaagaaggtttcggttcactgctaatctttccaagcgtacagaggctgcggctatgcgccgtaccaatcaggagaaattgaggattgcagttttggtttctaaagctgcatttcaatttattcaaggtgtacagccaagtgactatgttctacctcaggaagttaaagcggcaggttttggtatctgtgctgatgaattgggatccattgtggaaggccatgatgtaaagaagctaaaatttcatggaggggtaactggcctttcagaaaagctctccacatctataaatgatgggcttaataccgaaactgatttgcacactcgaagacaagagatttatggcattaataagtttacagagagcgaacagcgtgggggggttcataatttcatgcttagtcaaaatttctggtgtggtgcaggtgtacagccaagtgactatgttctacctcaggaagttaaagcggcaggttttggtatctgtgctgatgaattgggatccattgtggaaggccatgatgtaaagaagctaaaatttcatggaggggtaactggcctttcagaaaagctctccacatctataaatgatgggctcaataccgaaactgatttgcacactcgaagacaagagatttatggcattaataagtttacagagagcgaacagcgtggtttctttgtatttgtttgggaagcccttcaggacatgactcttatgatcctaggagtgtgtgcttttgtgtcattgatcgttggactagcaatggaagggtggccagcaggagctcatgatgggcttggaattgttgcgagtattatgctggttgtgtttgtcacggcaacaagtgattatcggcaatcactacagttcagggacttggacaaggagaagaagaagattgctaataccgaaactgatttgcacacgcgaagacaagagatttatggcattaataagtttacagagagcgaacagcgtggtttctttgtatttgtttgggaagcccttcaggacatgactcttatgatcctaggagtgtgtgcttttgtgtcattgatcgttggactagcaatggaagggtggccagcaggagctcatgatgggcttggaattgttgcgagtattatgctggttgtgtttgtcacggcaacaagtgattatcggcaatcactacagttcagggacttggacaaggagaagaagaagattgctatgcaagtaacaagaaatggatataggcagaaaatgtctatttatgaattactacctggtgatattgtacacctttctattggagaccaagtacctgcagatggtctatttgtttctggtttttctgtcttaattgatgaatccagtttaactggtgagagtgagcctattatggtaactcttgaaaatccctttcttctttctggaactaaggttcaagatggatcatgcaagatgatggttaccacagtcgggatgagaactcaatggggaaaattgatggctacactaagtgaaggtggagatgatgaaaccccattgcaggtcaagttgaatggagtggcaaccattattggtaagataggacttttctttgctgttgtgacttttgctgttatggtgcaaggactgtttagtcgaaaactgcaagaagggacacactggagctggaatggagatgatgcaatgcaattgttagagttctttgctgttgcagttacgattgttgttgttgctgtccctgaggggctgccactggctgtgacattgagtcttgcatttgccatgaagaaaatgatgaatgataaggcgcttgttcgccatctggcagcttgcgaaactatgggatcagccacgaacatttgcagtgacaaaactgggacactgacaaccaacaaaatgactgttgtgaagtcatgcatttgcatgaatgtcaaagatgtgagcaacctcagtgattcttcaagcctgttctctgatcttccggaatctgtgaagaaggttttgctgcaatcaatatttaacaacactggtggagaagttgtggttagcaaaggtggtaagactgagatgttgggaacacctaccgacactgctttgttggcgtttggcttggcacttggtggagattttcaagcagaaagaaaagcttctaaacttgtgaaagttgagcctttcaactcaacgaagaaaagaatgggggtcgtcttggagcttcctgaaggaggaggtttcagagcacatactaaaggtgcttcagaaatcattttggccaactgtgacaaggtgatcaattcaaagggtgaaactgttcctcttgatgaagcatccattaagcatctccaagctactatcaatgattttgcttgtgaggctcttcgaactatctgccttggctatatggaattagaaaaaggattctctgctgaggatcccattccaacttctggatatacttgcataggaattgttggcattaaagatcctgttcgtcccggtgtcaaggagtctgttgcagtttgccgttcagctggtatcacagtaagaatggttacaggagacaatattaacactgcaaaggccatagcaagggaatgtgggattctcactgacgatggattagccattgaaggtccggagttcagggagaagaatcaagaagaattgctttcactgatacctaaaattcaggttatggcgcgatcatcgcctctagacaagcataccctggtaaagcacttgaggaccacatttgatgaagtcgttgctgtaactggtgatggaacaaatgatgccccagcacttcatgaggcagatattggactagccatgggcattgccggaactgaggtggctaaggagagtgctgatgttctaattctggatgataatttctccacaattgtgacagtggcaaaatggggacgttcggtttacatcaatatccaaaaatttgtgcagttccagctgactgttaatattgttgcattgattgttaacttctcctcggcctgtctgacagggagtgctcccctcactgctgttcagctattgtgggtgaacatgattatggacacactgggagcacttgcacttgcaactgagcctccaaataatgacttaatgaagcgtccgccggttggaaagaggcaaaatttcatcagtaatgtaatgtggaggaatattttagggcagtctttctatcaatttacagtgttatggcttcttcaggctaaaggagaatcaatatttcgtcttaatggaccagattctaacttggtcctgaacacactcattttcaatacattcgtcttctgtcaggtgtttaacgaaataagctcgcgtgaaatggaagaaatagatgttttcaagggcatattggataattacgttttcgttgcagtcctcagtgccacagttgtgttccaaatcattattatcgagtttctggggaagtttgctagcacagcacctctcacctttgttcaatggtttgttacagtattcattggctttttagggatgccaattgctgctggtttgaagaagattcctgtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0008150 GO:0008324 GO:0009555 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042175 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

1219

Amino Acids

133.17

Weight (kDa)

5.75

Isoelectric Point (pI)

35.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22950 AT4G37640
fragaria_vesca	FvH4_1g17620
malus_domestica	MD02G1185000.v1.1 MD15G1296400.v1.1
prunus_persica	Prupe.6G221800_v2.0.a1 Prupe.6G221800_v2.0.a1
pyrus_communis	pycom02g14990 pycom15g25970
rosa_chinensis	RchiOBHm_Chr2g0107911
rosa_laevigata	RLG00000017627
rosa_multiflora	Rmu_sc0001484.1_g000032
rosa_roxburghii	Rroxscaffold_2G00135800
rosa_rugosa	Rorug02G0148700 Rorug02G0148800 Rorug02G0148800
rosa_samantha	Rh2BG210900 Rh2CG202700
rosa_wichuraiana	Rw2G015710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	518
AasI	GACNNNNNNGTC	1 cut(s)	1734
Acc36I	ACCTGC	5 cut(s)	269, 518, 566, 1423, 1633
AccB7I	CCANNNNNTGG	1 cut(s)	2546
AccII	CGCG	3 cut(s)	1036, 2800, 3442
AccIII	TCCGGA	2 cut(s)	2083, 2734
AciI	CCGC	4 cut(s)	155, 275, 572, 3233
AclI	AACGTT	1 cut(s)	62
AcoI	YGGCCR	3 cut(s)	881, 1190, 2370
AcsI	RAATTY	6 cut(s)	344, 511, 641, 2784, 3050, 3253
AcuI	CTGAAG	6 cut(s)	75, 791, 1100, 2340, 2340, 3311
AdeI	CACNNNGTG	2 cut(s)	1613, 2222
AfaI	GTAC	6 cut(s)	145, 169, 237, 534, 1389, 1413
AfiI	CCNNNNNNNGG	7 cut(s)	1421, 1572, 1642, 2324, 2546, 2688, 3239
AhdI	GACNNNNNGTC	1 cut(s)	1869
AjnI	CCWGG	2 cut(s)	1375, 2826
AleI	CACNNNNGTG	2 cut(s)	3002, 3518
AloI	GAACNNNNNNTCC	2 cut(s)	1518, 1550
Alw21I	GWGCWC	5 cut(s)	895, 1204, 2341, 3130, 3187
Alw26I	GTCTC	2 cut(s)	1398, 2652
AlwNI	CAGNNNCTG	1 cut(s)	152
Aor13HI	TCCGGA	2 cut(s)	2083, 2734
AoxI	GGCC	9 cut(s)	322, 364, 619, 661, 881, 1190, 2370, 2679, 3108
ApeKI	GCWGC	6 cut(s)	152, 212, 1849, 1928, 2107, 3632
ApoI	RAATTY	6 cut(s)	344, 511, 641, 2784, 3050, 3253
AseI	ATTAAT	3 cut(s)	453, 750, 1059
Asp700I	GAANNNNTTC	4 cut(s)	804, 1113, 2248, 2409
AspA2I	CCTAGG	2 cut(s)	829, 1138
AspLEI	GCGC	3 cut(s)	165, 1912, 2800
AspS9I	GGNCC	4 cut(s)	2732, 2844, 3362, 3379
AsuC2I	CCSGG	1 cut(s)	2595
AsuHPI	GGTGA	7 cut(s)	1391, 1487, 2398, 2414, 2888, 3169, 3568
AsuII	TTCGAA	1 cut(s)	2479
AsuNHI	GCTAGC	1 cut(s)	3560
AvaII	GGWCC	4 cut(s)	2732, 2844, 3362, 3379
AvrII	CCTAGG	2 cut(s)	829, 1138
AxyI	CCTNAGG	3 cut(s)	261, 558, 1842
BalI	TGGCCA	3 cut(s)	883, 1192, 2372
BamHI	GGATCC	3 cut(s)	308, 605, 2530
BanII	GRGCYC	4 cut(s)	50, 702, 895, 1204
BbsI	GAAGAC	4 cut(s)	439, 736, 1045, 3403
Bbv12I	GWGCWC	5 cut(s)	895, 1204, 2341, 3130, 3187
BbvCI	CCTCAGC	1 cut(s)	2526
BbvI	GCAGC	6 cut(s)	139, 199, 1836, 1940, 2094, 3619
BceAI	ACGGC	4 cut(s)	150, 960, 1269, 2607
BcgI	CGANNNNNNTGC	6 cut(s)	907, 941, 1216, 1250, 2469, 2503
BciT130I	CCWGG	2 cut(s)	1377, 2828
BclI	TGATCA	1 cut(s)	2388
BcnI	CCSGG	1 cut(s)	2595
BcoDI	GTCTC	2 cut(s)	1398, 2652
BfaI	CTAG	7 cut(s)	830, 866, 1139, 1175, 2813, 2924, 3561
BfmI	CTRYAG	3 cut(s)	971, 1280, 1416
BfoI	RGCGCY	1 cut(s)	1913
BfuAI	ACCTGC	5 cut(s)	269, 518, 566, 1423, 1633
BisI	GCNGC	9 cut(s)	153, 156, 213, 276, 573, 1850, 1929, 2108, 3633
BlnI	CCTAGG	2 cut(s)	829, 1138
BlsI	GCNGC	9 cut(s)	154, 157, 214, 277, 574, 1851, 1930, 2109, 3634
Bme1390I	CCNGG	3 cut(s)	1377, 2595, 2828
Bme18I	GGWCC	4 cut(s)	2732, 2844, 3362, 3379
BmeRI	GACNNNNNGTC	1 cut(s)	1869
BmgT120I	GGNCC	4 cut(s)	2732, 2844, 3362, 3379
BmiI	GGNNCC	3 cut(s)	310, 607, 2532
BmrFI	CCNGG	3 cut(s)	1377, 2595, 2828
BmrI	ACTGGG	2 cut(s)	1986, 3188
BmsI	GCATC	5 cut(s)	1771, 2435, 2446, 2881, 3612
BmtI	GCTAGC	1 cut(s)	3564
BmuI	ACTGGG	2 cut(s)	1986, 3188
BpiI	GAAGAC	4 cut(s)	439, 736, 1045, 3403
BpmI	CTGGAG	1 cut(s)	1783
Bpu10I	CCTNAGC	3 cut(s)	42, 2526, 2955
Bpu14I	TTCGAA	1 cut(s)	2479
BpuEI	CTTGAG	1 cut(s)	2860
BpuMI	CCSGG	1 cut(s)	2595
BsaI	GGTCTC	1 cut(s)	1398
BsaJI	CCNNGG	6 cut(s)	829, 1138, 2491, 2826, 2928, 3105
BsaWI	WCCGGW	2 cut(s)	2083, 2734
BsaXI	ACNNNNNCTCC	6 cut(s)	1395, 1425, 2127, 2157, 3190, 3220
Bsc4I	CCNNNNNNNGG	7 cut(s)	1421, 1572, 1642, 2324, 2546, 2688, 3239
Bse118I	RCCGGY	1 cut(s)	3235
Bse21I	CCTNAGG	3 cut(s)	261, 558, 1842
Bse3DI	GCAATG	5 cut(s)	876, 1185, 1637, 1791, 2934
BseAI	TCCGGA	2 cut(s)	2083, 2734
BseBI	CCWGG	2 cut(s)	1377, 2828
BseDI	CCNNGG	6 cut(s)	829, 1138, 2491, 2826, 2928, 3105
BseGI	GGATG	4 cut(s)	1581, 2426, 2989, 3627
BseLI	CCNNNNNNNGG	7 cut(s)	1421, 1572, 1642, 2324, 2546, 2688, 3239
BseMI	GCAATG	5 cut(s)	876, 1185, 1637, 1791, 2934
BseMII	CTCAG	9 cut(s)	275, 572, 1833, 2065, 2157, 2517, 2937, 3192, 3520
BseRI	GAGGAG	2 cut(s)	2340, 3094
BseXI	GCAGC	6 cut(s)	139, 199, 1836, 1940, 2094, 3619
BseYI	CCCAGC	1 cut(s)	2896
BsgI	GTGCAG	2 cut(s)	546, 3077
Bsh1236I	CGCG	3 cut(s)	1036, 2800, 3442
BshFI	GGCC	9 cut(s)	324, 366, 621, 663, 883, 1192, 2372, 2681, 3110
BsiHKAI	GWGCWC	5 cut(s)	895, 1204, 2341, 3130, 3187
BsiSI	CCGG	5 cut(s)	2084, 2595, 2735, 2940, 3236
BslFI	GGGAC	7 cut(s)	995, 1304, 1768, 1823, 1993, 2577, 3036
BslI	CCNNNNNNNGG	7 cut(s)	1421, 1572, 1642, 2324, 2546, 2688, 3239
BsmAI	GTCTC	2 cut(s)	1398, 2652
BsmFI	GGGAC	7 cut(s)	995, 1304, 1768, 1823, 1993, 2577, 3036
BsnI	GGCC	9 cut(s)	324, 366, 621, 663, 883, 1192, 2372, 2681, 3110
Bso31I	GGTCTC	1 cut(s)	1398
Bsp119I	TTCGAA	1 cut(s)	2479
Bsp1286I	GDGCHC	7 cut(s)	50, 702, 895, 1204, 2341, 3130, 3187
Bsp13I	TCCGGA	2 cut(s)	2083, 2734
Bsp1407I	TGTACA	3 cut(s)	235, 532, 1387
Bsp19I	CCATGG	1 cut(s)	2928
BspACI	CCGC	4 cut(s)	155, 275, 572, 3233
BspANI	GGCC	9 cut(s)	324, 366, 621, 663, 883, 1192, 2372, 2681, 3110
BspCNI	CTCAG	9 cut(s)	274, 571, 1834, 2064, 2158, 2518, 2938, 3193, 3519
BspEI	TCCGGA	2 cut(s)	2083, 2734
BspFNI	CGCG	3 cut(s)	1036, 2800, 3442
BspHI	TCATGA	3 cut(s)	895, 1204, 2905
BspLI	GGNNCC	3 cut(s)	310, 607, 2532
BspMAI	CTGCAG	1 cut(s)	1420
BspMI	ACCTGC	5 cut(s)	269, 518, 566, 1423, 1633
BspOI	GCTAGC	1 cut(s)	3564
BspQI	GCTCTTC	1 cut(s)	2481
BspT104I	TTCGAA	1 cut(s)	2479
BspTNI	GGTCTC	1 cut(s)	1398
BsrDI	GCAATG	5 cut(s)	876, 1185, 1637, 1791, 2934
BsrFI	RCCGGY	1 cut(s)	3235
BsrGI	TGTACA	3 cut(s)	235, 532, 1387
BssAI	RCCGGY	1 cut(s)	3235
BssECI	CCNNGG	6 cut(s)	829, 1138, 2491, 2826, 2928, 3105
BssT1I	CCWWGG	4 cut(s)	829, 1138, 2491, 2928
Bst2UI	CCWGG	2 cut(s)	1377, 2828
Bst6I	CTCTTC	1 cut(s)	2481
BstAUI	TGTACA	3 cut(s)	235, 532, 1387
BstBI	TTCGAA	1 cut(s)	2479
BstC8I	GCNNGC	5 cut(s)	885, 1194, 1933, 3440, 3562
BstDSI	CCRYGG	1 cut(s)	2928
BstEII	GGTNACC	1 cut(s)	1561
BstENI	CCTNNNNNAGG	1 cut(s)	2322
BstF5I	GGATG	4 cut(s)	1581, 2426, 2989, 3627
BstFNI	CGCG	3 cut(s)	1036, 2800, 3442
BstH2I	RGCGCY	1 cut(s)	1913
BstHHI	GCGC	3 cut(s)	165, 1912, 2800
BstMAI	GTCTC	2 cut(s)	1398, 2652
BstMWI	GCNNNNNNNGC	5 cut(s)	2201, 2471, 2806, 3064, 3566
BstNI	CCWGG	2 cut(s)	1377, 2828
BstPI	GGTNACC	1 cut(s)	1561
BstSCI	CCNGG	3 cut(s)	1375, 2593, 2826
BstSFI	CTRYAG	3 cut(s)	971, 1280, 1416
BstUI	CGCG	3 cut(s)	1036, 2800, 3442
BstV1I	GCAGC	6 cut(s)	139, 199, 1836, 1940, 2094, 3619
BstV2I	GAAGAC	4 cut(s)	439, 736, 1045, 3403
BstX2I	RGATCY	4 cut(s)	308, 605, 2530, 2581
BstYI	RGATCY	4 cut(s)	308, 605, 2530, 2581
Bsu36I	CCTNAGG	3 cut(s)	261, 558, 1842
BsuRI	GGCC	9 cut(s)	324, 366, 621, 663, 883, 1192, 2372, 2681, 3110
BtgI	CCRYGG	1 cut(s)	2928
BtgZI	GCGATG	1 cut(s)	2790
BtsCI	GGATG	4 cut(s)	1581, 2426, 2989, 3627
BtsI	GCAGTG	5 cut(s)	123, 1972, 2190, 2670, 3135
BveI	ACCTGC	5 cut(s)	269, 518, 566, 1423, 1633
Cac8I	GCNNGC	5 cut(s)	885, 1194, 1933, 3440, 3562
CaiI	CAGNNNCTG	1 cut(s)	152
CciI	TCATGA	3 cut(s)	895, 1204, 2905
CfoI	GCGC	3 cut(s)	165, 1912, 2800
Cfr10I	RCCGGY	1 cut(s)	3235
Cfr13I	GGNCC	4 cut(s)	2732, 2844, 3362, 3379
CseI	GACGC	1 cut(s)	3218
CsiI	ACCWGGT	1 cut(s)	1375
Csp6I	GTAC	6 cut(s)	144, 168, 236, 533, 1388, 1412
CspCI	CAANNNNNGTGG	2 cut(s)	2113, 2148
CviQI	GTAC	6 cut(s)	144, 168, 236, 533, 1388, 1412
DraIII	CACNNNGTG	2 cut(s)	1613, 2222
DrdI	GACNNNNNNGTC	1 cut(s)	1734
DriI	GACNNNNNGTC	1 cut(s)	1869
DseDI	GACNNNNNNGTC	1 cut(s)	1734
EaeI	YGGCCR	3 cut(s)	881, 1190, 2370
Eam1104I	CTCTTC	1 cut(s)	2481
Eam1105I	GACNNNNNGTC	1 cut(s)	1869
EarI	CTCTTC	1 cut(s)	2481
EciI	GGCGGA	1 cut(s)	3222
Ecl136II	GAGCTC	2 cut(s)	893, 1202
Eco130I	CCWWGG	4 cut(s)	829, 1138, 2491, 2928
Eco24I	GRGCYC	4 cut(s)	50, 702, 895, 1204
Eco31I	GGTCTC	1 cut(s)	1398
Eco47I	GGWCC	4 cut(s)	2732, 2844, 3362, 3379
Eco53kI	GAGCTC	2 cut(s)	893, 1202
Eco57I	CTGAAG	6 cut(s)	75, 791, 1100, 2340, 2340, 3311
Eco81I	CCTNAGG	3 cut(s)	261, 558, 1842
Eco91I	GGTNACC	1 cut(s)	1561
EcoICRI	GAGCTC	2 cut(s)	893, 1202
EcoNI	CCTNNNNNAGG	1 cut(s)	2322
EcoO65I	GGTNACC	1 cut(s)	1561
EcoRII	CCWGG	2 cut(s)	1375, 2826
EcoT14I	CCWWGG	4 cut(s)	829, 1138, 2491, 2928
EcoT22I	ATGCAT	1 cut(s)	2021
EcoT38I	GRGCYC	4 cut(s)	50, 702, 895, 1204
ErhI	CCWWGG	4 cut(s)	829, 1138, 2491, 2928
FalI	AAGNNNNNCTT	4 cut(s)	2233, 2265, 2751, 2783
FaqI	GGGAC	7 cut(s)	995, 1304, 1768, 1823, 1993, 2577, 3036
FbaI	TGATCA	1 cut(s)	2388
Fnu4HI	GCNGC	9 cut(s)	153, 156, 213, 276, 573, 1850, 1929, 2108, 3633
FokI	GGATG	4 cut(s)	1588, 2413, 2996, 3634
FriOI	GRGCYC	4 cut(s)	50, 702, 895, 1204
Fsp4HI	GCNGC	9 cut(s)	153, 156, 213, 276, 573, 1850, 1929, 2108, 3633
FspBI	CTAG	7 cut(s)	830, 866, 1139, 1175, 2813, 2924, 3561
GlaI	GCGC	3 cut(s)	164, 1911, 2799
GluI	GCNGC	9 cut(s)	153, 156, 213, 276, 573, 1850, 1929, 2108, 3633
GsaI	CCCAGC	1 cut(s)	2900
GsuI	CTGGAG	1 cut(s)	1783
HaeII	RGCGCY	1 cut(s)	1913
HaeIII	GGCC	9 cut(s)	324, 366, 621, 663, 883, 1192, 2372, 2681, 3110
HapII	CCGG	5 cut(s)	2084, 2595, 2735, 2940, 3236
HgaI	GACGC	1 cut(s)	3218
HhaI	GCGC	3 cut(s)	165, 1912, 2800
Hin6I	GCGC	3 cut(s)	163, 1910, 2798
HinP1I	GCGC	3 cut(s)	163, 1910, 2798
HincII	GTYRAC	1 cut(s)	3097
HindII	GTYRAC	1 cut(s)	3097
HindIII	AAGCTT	1 cut(s)	2247
HpaI	GTTAAC	1 cut(s)	3097
HpaII	CCGG	5 cut(s)	2084, 2595, 2735, 2940, 3236
HphI	GGTGA	7 cut(s)	1391, 1487, 2398, 2414, 2888, 3169, 3568
Hpy188I	TCNGA	7 cut(s)	55, 373, 670, 2077, 2336, 2359, 3117
HpyCH4IV	ACGT	3 cut(s)	62, 3025, 3489
HpyF10VI	GCNNNNNNNGC	5 cut(s)	2201, 2471, 2806, 3064, 3566
HpySE526I	ACGT	3 cut(s)	62, 3025, 3489
HspAI	GCGC	3 cut(s)	163, 1910, 2798
Kpn2I	TCCGGA	2 cut(s)	2083, 2734
Ksp22I	TGATCA	1 cut(s)	2388
KspAI	GTTAAC	1 cut(s)	3097
LguI	GCTCTTC	1 cut(s)	2481
LmnI	GCTCC	6 cut(s)	890, 1199, 1764, 2311, 3133, 3182
Lsp1109I	GCAGC	6 cut(s)	139, 199, 1836, 1940, 2094, 3619
LweI	GCATC	5 cut(s)	1771, 2435, 2446, 2881, 3612
MabI	ACCWGGT	1 cut(s)	1375
MaeI	CTAG	7 cut(s)	830, 866, 1139, 1175, 2813, 2924, 3561
MaeII	ACGT	3 cut(s)	62, 3025, 3489
MfeI	CAATTG	3 cut(s)	1790, 3000, 3627
MflI	RGATCY	4 cut(s)	308, 605, 2530, 2581
MhlI	GDGCHC	7 cut(s)	50, 702, 895, 1204, 2341, 3130, 3187
MlsI	TGGCCA	3 cut(s)	883, 1192, 2372
MluNI	TGGCCA	3 cut(s)	883, 1192, 2372
MlyI	GAGTC	4 cut(s)	811, 1120, 1879, 2615
MmeI	TCCRAC	4 cut(s)	841, 1150, 2564, 3220
Mox20I	TGGCCA	3 cut(s)	883, 1192, 2372
Mph1103I	ATGCAT	1 cut(s)	2021
MroI	TCCGGA	2 cut(s)	2083, 2734
MroXI	GAANNNNTTC	4 cut(s)	804, 1113, 2248, 2409
MscI	TGGCCA	3 cut(s)	883, 1192, 2372
MslI	CAYNNNNRTG	4 cut(s)	2024, 3002, 3167, 3518
Msp20I	TGGCCA	3 cut(s)	883, 1192, 2372
MspA1I	CMGCKG	2 cut(s)	2630, 3067
MspI	CCGG	5 cut(s)	2084, 2595, 2735, 2940, 3236
MspR9I	CCNGG	3 cut(s)	1377, 2595, 2828
MunI	CAATTG	3 cut(s)	1790, 3000, 3627
MvaI	CCWGG	2 cut(s)	1377, 2828
MvnI	CGCG	3 cut(s)	1036, 2800, 3442
MwoI	GCNNNNNNNGC	5 cut(s)	2201, 2471, 2806, 3064, 3566
NciI	CCSGG	1 cut(s)	2595
NcoI	CCATGG	1 cut(s)	2928
NheI	GCTAGC	1 cut(s)	3560
NlaIV	GGNNCC	3 cut(s)	310, 607, 2532
NmeAIII	GCCGAG	1 cut(s)	3086
NmuCI	GTSAC	9 cut(s)	245, 542, 940, 1249, 1702, 1861, 1967, 2378, 3004
NsiI	ATGCAT	1 cut(s)	2021
NspV	TTCGAA	1 cut(s)	2479
OliI	CACNNNNGTG	2 cut(s)	3002, 3518
PagI	TCATGA	3 cut(s)	895, 1204, 2905
PaqCI	CACCTGC	1 cut(s)	518
PciSI	GCTCTTC	1 cut(s)	2481
PdmI	GAANNNNTTC	4 cut(s)	804, 1113, 2248, 2409
PfeI	GAWTC	9 cut(s)	1460, 2057, 2087, 2517, 2701, 2752, 3341, 3368, 3649
PflMI	CCANNNNNTGG	1 cut(s)	2546
PkrI	GCNGC	9 cut(s)	154, 157, 214, 277, 574, 1851, 1930, 2109, 3634
PleI	GAGTC	4 cut(s)	811, 1120, 1878, 2614
PpsI	GAGTC	4 cut(s)	811, 1120, 1878, 2614
PshBI	ATTAAT	3 cut(s)	453, 750, 1059
Psp124BI	GAGCTC	2 cut(s)	895, 1204
Psp1406I	AACGTT	1 cut(s)	62
Psp6I	CCWGG	2 cut(s)	1375, 2826
PspEI	GGTNACC	1 cut(s)	1561
PspFI	CCCAGC	1 cut(s)	2896
PspGI	CCWGG	2 cut(s)	1375, 2826
PspN4I	GGNNCC	3 cut(s)	310, 607, 2532
PspPI	GGNCC	4 cut(s)	2732, 2844, 3362, 3379
PstI	CTGCAG	1 cut(s)	1420
PstNI	CAGNNNCTG	1 cut(s)	152
PsuI	RGATCY	4 cut(s)	308, 605, 2530, 2581
PvuII	CAGCTG	2 cut(s)	2630, 3067
RsaI	GTAC	6 cut(s)	145, 169, 237, 534, 1389, 1413
RsaNI	GTAC	6 cut(s)	144, 168, 236, 533, 1388, 1412
RseI	CAYNNNNRTG	4 cut(s)	2024, 3002, 3167, 3518
SacI	GAGCTC	2 cut(s)	895, 1204
SapI	GCTCTTC	1 cut(s)	2481
SatI	GCNGC	9 cut(s)	153, 156, 213, 276, 573, 1850, 1929, 2108, 3633
Sau96I	GGNCC	4 cut(s)	2732, 2844, 3362, 3379
SchI	GAGTC	4 cut(s)	811, 1120, 1879, 2615
ScrFI	CCNGG	3 cut(s)	1377, 2595, 2828
SduI	GDGCHC	7 cut(s)	50, 702, 895, 1204, 2341, 3130, 3187
SexAI	ACCWGGT	1 cut(s)	1375
SfaNI	GCATC	5 cut(s)	1771, 2435, 2446, 2881, 3612
SfcI	CTRYAG	3 cut(s)	971, 1280, 1416
SfuI	TTCGAA	1 cut(s)	2479
SinI	GGWCC	4 cut(s)	2732, 2844, 3362, 3379
SmiMI	CAYNNNNRTG	4 cut(s)	2024, 3002, 3167, 3518
SmlI	CTYRAG	1 cut(s)	2839
SmoI	CTYRAG	1 cut(s)	2839
SsiI	CCGC	4 cut(s)	155, 275, 572, 3233
SspI	AATATT	5 cut(s)	2118, 2665, 3079, 3283, 3348
SspMI	CTAG	7 cut(s)	830, 866, 1139, 1175, 2813, 2924, 3561
SstI	GAGCTC	2 cut(s)	895, 1204
StyD4I	CCNGG	3 cut(s)	1375, 2593, 2826
StyI	CCWWGG	4 cut(s)	829, 1138, 2491, 2928
TaiI	ACGT	3 cut(s)	65, 3028, 3492
TaqI	TCGA	5 cut(s)	430, 727, 1738, 2479, 3540
TatI	WGTACW	3 cut(s)	235, 532, 1387
TauI	GCSGC	3 cut(s)	158, 278, 575
TfiI	GAWTC	9 cut(s)	1460, 2057, 2087, 2517, 2701, 2752, 3341, 3368, 3649
TseFI	GTSAC	9 cut(s)	245, 542, 940, 1249, 1702, 1861, 1967, 2378, 3004
TseI	GCWGC	6 cut(s)	152, 212, 1849, 1928, 2107, 3632
Tsp45I	GTSAC	9 cut(s)	245, 542, 940, 1249, 1702, 1861, 1967, 2378, 3004
Van91I	CCANNNNNTGG	1 cut(s)	2546
VpaK11BI	GGWCC	4 cut(s)	2732, 2844, 3362, 3379
VspI	ATTAAT	3 cut(s)	453, 750, 1059
XagI	CCTNNNNNAGG	1 cut(s)	2322
XapI	RAATTY	6 cut(s)	344, 511, 641, 2784, 3050, 3253
XbaI	TCTAGA	1 cut(s)	2812
XmaJI	CCTAGG	2 cut(s)	829, 1138
XmnI	GAANNNNTTC	4 cut(s)	804, 1113, 2248, 2409
XspI	CTAG	7 cut(s)	830, 866, 1139, 1175, 2813, 2924, 3561
Zsp2I	ATGCAT	1 cut(s)	2021

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.