Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011654

Physical Location & Seq

Genomic Coordinates Reverse (-)

19492797 .. 19496680

Gene Structure 3884 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48190

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2916 bp

ATGAATTGTAAGTTCTGCCATCCAACTACTCTACTTATTTACAGATTACCTTGTCACTTACATTTTGCAGGAGAAATTGAGGATTGCAGTTTTGGTGTGCAGCCAAGTGACTATGTTCTACCTCAGGAAGTTAAAGCGGCAGGTTTTGGTATCTGTGCTGATGAATTGGGATCCATTGTGGAAGGCCATGACGTAAAGAAGCTAAAATTTCATGGAGGGGTAACTGGTCTTTCAGAAAAGCTCTCCACATCTATGAATGATGGGCTCAATACCGAAACTGATTTGCACACGCGAAGACAAGAGATTTATGGCATTAATAAGTTTACAGAGAGCGAACAGCGTGGTTTCTTTGTATTTGTTTGGGAAGCCCTTCAGGACATGACTCTTATGATCCTCGGAGTGTGTGCTTTTGTGTCATTGATCGTTGGACTAGCAATGGAAGGATGGCCAGCAGGAGCTCATGATGGGCTTGGAATTGTTGCGAGTATTATGCTGGTTGTGTTTGTCACGGCAACAAGTGATTATCGGCAATCACTACAGTTCAGGGACTTGGACAAGGAGAAGAAGAAGATTGCTATGCAAGTAACAAGAAATGGATATAGGCAGAAAATGTCTATTTATGAATTACTACCTGGTGATATTGTACACCTTTCTATTGGAGACCAAGTACCTGCAGATGGTCTATTTGTTTCCGGTTTTTCTGTCTTAATTGATGAATCCAGTTTAACTGGTGAGAGTGAGCCGATTATGGTAACTCTTGAAAATCCCTTTCTTCTTTCTGGAACTAAGGTTCAAGATGGATCATGCAAGATGATGGTTACCACAGTCGGGATGAGAACTCAATGGGGCAAATTGATGGCTACACTAAGTGAAGGTGGAGATGATGAAACCCCATTGCAGGTCAAGTTGAATGGAGTGGCAACCATTATTGGTAAGATAGGACTTTTCTTTGCTGTTGTGACTTTTGCTGTTATGGTGCAAGGACTGTTTAGTCGAAAACTGCAAGAAGGGACACACTGGAGCTGGAATGGAGATGATGCAATGCAATTGTTAGAGTTCTTTGCTGTTGCAGTTACGATTGTTGTTGTTGCTGTCCCTGAGGGGCTGCCACTGGCTGTGACATTGAGTCTTGCATTTGCCATGAAGAAAATGATGAATGATAAGGCGCTTGTTCGCCATCTGGCAGCTTGCGAAACTATGGGATCAGCCACGAACATTTGCAGTGACAAAACTGGGACACTGACAACCAACAAAATGACTGTTGTGAAGTCATGCATTTGCATGAATGTCAAAGATGTGAGCAACCTCAGTGATGCTTCAAGCCTGTTCTCTGATCTTCCGGAATCTGTTAAGAAGGTTTTGCTGCAATCAATATTTAACAACACTGGTGGAGAAGTTGTGGTTAGCAAAGGTGGTAAGAATGAGATGTTGGGAACACCTACCGACACTGCTTTGTTGGCGTTTGGCTTGGCACTTGGTGGAGATTTTCAAGCAGAAAGAAAAGCTTCTAAACTTGTGAAAGTTGAGCCTTTCAACTCAACGAAGAAAAAAATGGGGGTAGTGTTGGAGCTTCCTGAAGGAGGAGGTTTCAGAGCACACACTAAAGGTGCTTCAGAAATCATTTTGGCCAACTGTGACAAGGTGATCAATTCAAAGGGTGAAACTGTTCCTCTTGATGAAGCATCCATTAAGCATCTCCAAGCTACTATCAATGATTTTGCTTGTGAGGCTCTTCGAACTATCTGCCTTGGCTATATGGAATTAGAAAAAGGATTCTCTGCTGAGGATCCCATTCCAACTTCTGGATATACTTGCATAGGAATTGTTGGCATTAAAGATCCTGTTCGTCCTGGTGTCAAGGAGTCTGTTGCAGTTTGCCGCTCAGCTGGTATCACAGTAAGAATGGTTACAGGAGACAATATTAACACTGCAAAGGCCATAGCAAGGGAATGTGGGATTCTCACTGATGATGGATTAGCCATTGAAGGTCCGGAATTCAGGGAGAAGAATCAAGAAGAATTGCTTTCACTGATACCTAAAATTCAGGTTATGGCGCGATCATCGCCTCTAGACAAGCATACCCTGGTAAAGCACTTGAGGACCACATTTGATGAAGTCGTTGCTGTAACTGGTGATGGAACAAATGATGCCCCAGCACTTCATGAGGCAGATATTGGACTAGCCATGGGCATTGCCGGAACTGAGGTGGCTAAGGAGAGTGCTGATGTTCTAATTCTGGATGATAATTTCTCCACAATTGTGACAGTGGCAAAATGGGGACGTTCGGTTTACATCAATATCCAAAAATTTGTGCAGTTCCAGCTGACTGTTAATATTGTTGCATTGATTGTTAACTTCTCCTCGGCCTGTTTGACAGGGAGTGCTCCCCTCACTGCTGTTCAGCTATTGTGGGTGAACATGATTATGGACACACTGGGAGCACTTGCACTTGCAACTGAGCCTCCAAATAATGACTTAATGAAGCGTCCGCCAGTTGGAAAGAGGCAAAATTTCATCAGTAATGTAATGTGGAGGAATATTTTAGGGCAGTCTTTCTATCAATTTACAGTGTTATGGCTTCTTCAGGCTAAAGGAGAATCAATATTTCGTCTTAATGGACCAGATTCTAACTTGGTCCTGAACACACTCATTTTCAATACATTCGTCTTCTGTCAGGTGTTCAACGAAATAAGCTCGCGTGAGATGGAAGAAATAGATGTTTTCAAGGGCATATTGGATAATTACGTTTTCGTTGCAGTCCTCAGTGCCACAGTTGTGTTCCAAATCATTATTATCGAGTTTCTGGGGAAGTTTGCTAGCACAGCACCTCTTACCTTTGTTCAATGGTTTGTTACTGTATTCATTGGCTTTTTAGGGATGCCAATTGCTGCTGGTTTGAAGAAGATTCCTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0008150 GO:0008324 GO:0009555 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042175 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

971

Amino Acids

105.45

Weight (kDa)

5.38

Isoelectric Point (pI)

34.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	71 - 139	7.2e-10	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	192 - 288	4e-21	P-type ATPase actuator domain
Cation_ATPase	PF13246	469 - 617	2.8e-32	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	590 - 724	2.1e-11	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	795 - 968	3.1e-42	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22950 AT4G37640
fragaria_vesca	FvH4_1g17620
malus_domestica	MD02G1185000.v1.1 MD15G1296400.v1.1
prunus_persica	Prupe.6G221800_v2.0.a1 Prupe.6G221800_v2.0.a1
pyrus_communis	pycom02g14990 pycom15g25970
rosa_chinensis	RchiOBHm_Chr2g0107911
rosa_laevigata	RLG00000017627
rosa_multiflora	Rmu_sc0001484.1_g000032
rosa_roxburghii	Rroxscaffold_2G00135800
rosa_rugosa	Rorug02G0148700 Rorug02G0148800 Rorug02G0148800
rosa_samantha	Rh2BG210900 Rh2CG202700
rosa_wichuraiana	Rw2G015710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	990
Acc36I	ACCTGC	3 cut(s)	131, 679, 889
AccB7I	CCANNNNNTGG	1 cut(s)	1802
AccBSI	CCGCTC	1 cut(s)	1881
AccII	CGCG	3 cut(s)	292, 2056, 2698
AccIII	TCCGGA	2 cut(s)	1339, 1990
AciI	CCGC	3 cut(s)	137, 1879, 2489
AclWI	GGATC	8 cut(s)	165, 178, 385, 808, 1210, 1781, 1794, 1832
AcoI	YGGCCR	2 cut(s)	446, 1626
AcsI	RAATTY	5 cut(s)	206, 1994, 2040, 2306, 2509
AcuI	CTGAAG	4 cut(s)	356, 1596, 1596, 2567
AdeI	CACNNNGTG	2 cut(s)	869, 1478
AfaI	GTAC	2 cut(s)	645, 669
AfiI	CCNNNNNNNGG	7 cut(s)	677, 828, 898, 1580, 1802, 1944, 2495
AhdI	GACNNNNNGTC	1 cut(s)	1125
AjnI	CCWGG	3 cut(s)	631, 1849, 2082
AjuI	GAANNNNNNNTTGG	2 cut(s)	1412, 1444
AleI	CACNNNNGTG	2 cut(s)	2258, 2774
AloI	GAACNNNNNNTCC	2 cut(s)	774, 806
Alw21I	GWGCWC	4 cut(s)	460, 1597, 2386, 2443
Alw26I	GTCTC	2 cut(s)	654, 1908
AlwI	GGATC	8 cut(s)	165, 178, 385, 808, 1210, 1781, 1794, 1832
Aor13HI	TCCGGA	2 cut(s)	1339, 1990
AoxI	GGCC	5 cut(s)	184, 446, 1626, 1935, 2364
ApeKI	GCWGC	5 cut(s)	100, 1105, 1184, 1363, 2888
ApoI	RAATTY	5 cut(s)	206, 1994, 2040, 2306, 2509
AseI	ATTAAT	1 cut(s)	315
Asp700I	GAANNNNTTC	3 cut(s)	369, 1504, 1665
AspLEI	GCGC	2 cut(s)	1168, 2056
AspS9I	GGNCC	4 cut(s)	1988, 2100, 2618, 2635
AsuHPI	GGTGA	6 cut(s)	647, 743, 1654, 1670, 2144, 2425
AsuII	TTCGAA	1 cut(s)	1735
AsuNHI	GCTAGC	1 cut(s)	2816
AvaII	GGWCC	4 cut(s)	1988, 2100, 2618, 2635
AxyI	CCTNAGG	2 cut(s)	123, 1098
BalI	TGGCCA	2 cut(s)	448, 1628
BamHI	GGATCC	2 cut(s)	170, 1786
BanII	GRGCYC	2 cut(s)	267, 460
BbsI	GAAGAC	2 cut(s)	301, 2659
Bbv12I	GWGCWC	4 cut(s)	460, 1597, 2386, 2443
BbvCI	CCTCAGC	1 cut(s)	1782
BbvI	GCAGC	5 cut(s)	112, 1092, 1196, 1350, 2875
BceAI	ACGGC	1 cut(s)	525
BcgI	CGANNNNNNTGC	4 cut(s)	472, 506, 1725, 1759
BciT130I	CCWGG	3 cut(s)	633, 1851, 2084
BclI	TGATCA	1 cut(s)	1644
BcoDI	GTCTC	2 cut(s)	654, 1908
BfaI	CTAG	4 cut(s)	431, 2069, 2180, 2817
BfmI	CTRYAG	2 cut(s)	536, 672
BfoI	RGCGCY	1 cut(s)	1169
BfuAI	ACCTGC	3 cut(s)	131, 679, 889
BisI	GCNGC	7 cut(s)	101, 138, 1106, 1185, 1364, 1879, 2889
BlpI	GCTNAGC	1 cut(s)	1882
BlsI	GCNGC	7 cut(s)	102, 139, 1107, 1186, 1365, 1880, 2890
Bme1390I	CCNGG	3 cut(s)	633, 1851, 2084
Bme18I	GGWCC	4 cut(s)	1988, 2100, 2618, 2635
BmeRI	GACNNNNNGTC	1 cut(s)	1125
BmgT120I	GGNCC	4 cut(s)	1988, 2100, 2618, 2635
BmiI	GGNNCC	2 cut(s)	172, 1788
BmrFI	CCNGG	3 cut(s)	633, 1851, 2084
BmrI	ACTGGG	2 cut(s)	1242, 2444
BmsI	GCATC	6 cut(s)	1027, 1303, 1691, 1702, 2137, 2868
BmtI	GCTAGC	1 cut(s)	2820
BmuI	ACTGGG	2 cut(s)	1242, 2444
BpiI	GAAGAC	2 cut(s)	301, 2659
BpmI	CTGGAG	1 cut(s)	1039
Bpu10I	CCTNAGC	2 cut(s)	1782, 2211
Bpu1102I	GCTNAGC	1 cut(s)	1882
Bpu14I	TTCGAA	1 cut(s)	1735
BpuEI	CTTGAG	1 cut(s)	2116
BsaI	GGTCTC	1 cut(s)	654
BsaJI	CCNNGG	5 cut(s)	394, 1747, 2082, 2184, 2361
BsaWI	WCCGGW	3 cut(s)	692, 1339, 1990
BsaXI	ACNNNNNCTCC	6 cut(s)	651, 681, 1383, 1413, 2446, 2476
Bsc4I	CCNNNNNNNGG	7 cut(s)	677, 828, 898, 1580, 1802, 1944, 2495
Bse21I	CCTNAGG	2 cut(s)	123, 1098
Bse3DI	GCAATG	4 cut(s)	441, 893, 1047, 2190
BseAI	TCCGGA	2 cut(s)	1339, 1990
BseBI	CCWGG	3 cut(s)	633, 1851, 2084
BseDI	CCNNGG	5 cut(s)	394, 1747, 2082, 2184, 2361
BseGI	GGATG	6 cut(s)	19, 449, 837, 1682, 2245, 2883
BseLI	CCNNNNNNNGG	7 cut(s)	677, 828, 898, 1580, 1802, 1944, 2495
BseMI	GCAATG	4 cut(s)	441, 893, 1047, 2190
BseMII	CTCAG	8 cut(s)	137, 1089, 1321, 1773, 1896, 2193, 2448, 2776
BseRI	GAGGAG	2 cut(s)	1596, 2350
BseXI	GCAGC	5 cut(s)	112, 1092, 1196, 1350, 2875
BseYI	CCCAGC	1 cut(s)	2152
BsgI	GTGCAG	2 cut(s)	119, 2333
Bsh1236I	CGCG	3 cut(s)	292, 2056, 2698
BshFI	GGCC	5 cut(s)	186, 448, 1628, 1937, 2366
BsiHKAI	GWGCWC	4 cut(s)	460, 1597, 2386, 2443
BsiSI	CCGG	4 cut(s)	693, 1340, 1991, 2196
BslFI	GGGAC	5 cut(s)	560, 1024, 1079, 1249, 2292
BslI	CCNNNNNNNGG	7 cut(s)	677, 828, 898, 1580, 1802, 1944, 2495
BsmAI	GTCTC	2 cut(s)	654, 1908
BsmFI	GGGAC	5 cut(s)	560, 1024, 1079, 1249, 2292
BsnI	GGCC	5 cut(s)	186, 448, 1628, 1937, 2366
Bso31I	GGTCTC	1 cut(s)	654
Bsp119I	TTCGAA	1 cut(s)	1735
Bsp1286I	GDGCHC	5 cut(s)	267, 460, 1597, 2386, 2443
Bsp13I	TCCGGA	2 cut(s)	1339, 1990
Bsp1407I	TGTACA	1 cut(s)	643
Bsp1720I	GCTNAGC	1 cut(s)	1882
Bsp19I	CCATGG	1 cut(s)	2184
BspACI	CCGC	3 cut(s)	137, 1879, 2489
BspANI	GGCC	5 cut(s)	186, 448, 1628, 1937, 2366
BspCNI	CTCAG	8 cut(s)	136, 1090, 1320, 1774, 1895, 2194, 2449, 2775
BspEI	TCCGGA	2 cut(s)	1339, 1990
BspFNI	CGCG	3 cut(s)	292, 2056, 2698
BspHI	TCATGA	2 cut(s)	460, 2161
BspLI	GGNNCC	2 cut(s)	172, 1788
BspMAI	CTGCAG	1 cut(s)	676
BspMI	ACCTGC	3 cut(s)	131, 679, 889
BspOI	GCTAGC	1 cut(s)	2820
BspPI	GGATC	8 cut(s)	165, 178, 385, 808, 1210, 1781, 1794, 1832
BspQI	GCTCTTC	1 cut(s)	1737
BspT104I	TTCGAA	1 cut(s)	1735
BspTNI	GGTCTC	1 cut(s)	654
BsrBI	CCGCTC	1 cut(s)	1881
BsrDI	GCAATG	4 cut(s)	441, 893, 1047, 2190
BsrGI	TGTACA	1 cut(s)	643
BssECI	CCNNGG	5 cut(s)	394, 1747, 2082, 2184, 2361
BssT1I	CCWWGG	2 cut(s)	1747, 2184
Bst2UI	CCWGG	3 cut(s)	633, 1851, 2084
Bst6I	CTCTTC	1 cut(s)	1737
BstAUI	TGTACA	1 cut(s)	643
BstBI	TTCGAA	1 cut(s)	1735
BstC8I	GCNNGC	4 cut(s)	450, 1189, 2696, 2818
BstDSI	CCRYGG	1 cut(s)	2184
BstEII	GGTNACC	1 cut(s)	817
BstENI	CCTNNNNNAGG	1 cut(s)	1578
BstF5I	GGATG	6 cut(s)	19, 449, 837, 1682, 2245, 2883
BstFNI	CGCG	3 cut(s)	292, 2056, 2698
BstH2I	RGCGCY	1 cut(s)	1169
BstHHI	GCGC	2 cut(s)	1168, 2056
BstMAI	GTCTC	2 cut(s)	654, 1908
BstMWI	GCNNNNNNNGC	5 cut(s)	1457, 1727, 2062, 2320, 2822
BstNI	CCWGG	3 cut(s)	633, 1851, 2084
BstPI	GGTNACC	1 cut(s)	817
BstSCI	CCNGG	3 cut(s)	631, 1849, 2082
BstSFI	CTRYAG	2 cut(s)	536, 672
BstUI	CGCG	3 cut(s)	292, 2056, 2698
BstV1I	GCAGC	5 cut(s)	112, 1092, 1196, 1350, 2875
BstV2I	GAAGAC	2 cut(s)	301, 2659
BstX2I	RGATCY	3 cut(s)	170, 1786, 1837
BstYI	RGATCY	3 cut(s)	170, 1786, 1837
Bsu36I	CCTNAGG	2 cut(s)	123, 1098
BsuRI	GGCC	5 cut(s)	186, 448, 1628, 1937, 2366
BtgI	CCRYGG	1 cut(s)	2184
BtgZI	GCGATG	1 cut(s)	2046
BtsCI	GGATG	6 cut(s)	19, 449, 837, 1682, 2245, 2883
BtsI	GCAGTG	4 cut(s)	1228, 1446, 1926, 2391
BveI	ACCTGC	3 cut(s)	131, 679, 889
Cac8I	GCNNGC	4 cut(s)	450, 1189, 2696, 2818
CciI	TCATGA	2 cut(s)	460, 2161
CfoI	GCGC	2 cut(s)	1168, 2056
Cfr13I	GGNCC	4 cut(s)	1988, 2100, 2618, 2635
CseI	GACGC	1 cut(s)	2474
CsiI	ACCWGGT	1 cut(s)	631
Csp6I	GTAC	2 cut(s)	644, 668
CspCI	CAANNNNNGTGG	2 cut(s)	1369, 1404
CviQI	GTAC	2 cut(s)	644, 668
DraIII	CACNNNGTG	2 cut(s)	869, 1478
DrdI	GACNNNNNNGTC	1 cut(s)	990
DriI	GACNNNNNGTC	1 cut(s)	1125
DseDI	GACNNNNNNGTC	1 cut(s)	990
EaeI	YGGCCR	2 cut(s)	446, 1626
Eam1104I	CTCTTC	1 cut(s)	1737
Eam1105I	GACNNNNNGTC	1 cut(s)	1125
EarI	CTCTTC	1 cut(s)	1737
EciI	GGCGGA	1 cut(s)	2478
Ecl136II	GAGCTC	1 cut(s)	458
Eco130I	CCWWGG	2 cut(s)	1747, 2184
Eco24I	GRGCYC	2 cut(s)	267, 460
Eco31I	GGTCTC	1 cut(s)	654
Eco47I	GGWCC	4 cut(s)	1988, 2100, 2618, 2635
Eco53kI	GAGCTC	1 cut(s)	458
Eco57I	CTGAAG	4 cut(s)	356, 1596, 1596, 2567
Eco81I	CCTNAGG	2 cut(s)	123, 1098
Eco91I	GGTNACC	1 cut(s)	817
EcoICRI	GAGCTC	1 cut(s)	458
EcoNI	CCTNNNNNAGG	1 cut(s)	1578
EcoO65I	GGTNACC	1 cut(s)	817
EcoRI	GAATTC	1 cut(s)	1994
EcoRII	CCWGG	3 cut(s)	631, 1849, 2082
EcoT14I	CCWWGG	2 cut(s)	1747, 2184
EcoT22I	ATGCAT	1 cut(s)	1277
EcoT38I	GRGCYC	2 cut(s)	267, 460
ErhI	CCWWGG	2 cut(s)	1747, 2184
FalI	AAGNNNNNCTT	4 cut(s)	1489, 1521, 2007, 2039
FaqI	GGGAC	5 cut(s)	560, 1024, 1079, 1249, 2292
FbaI	TGATCA	1 cut(s)	1644
Fnu4HI	GCNGC	7 cut(s)	101, 138, 1106, 1185, 1364, 1879, 2889
FokI	GGATG	6 cut(s)	6, 456, 844, 1669, 2252, 2890
FriOI	GRGCYC	2 cut(s)	267, 460
Fsp4HI	GCNGC	7 cut(s)	101, 138, 1106, 1185, 1364, 1879, 2889
FspBI	CTAG	4 cut(s)	431, 2069, 2180, 2817
GlaI	GCGC	2 cut(s)	1167, 2055
GluI	GCNGC	7 cut(s)	101, 138, 1106, 1185, 1364, 1879, 2889
GsaI	CCCAGC	1 cut(s)	2156
GsuI	CTGGAG	1 cut(s)	1039
HaeII	RGCGCY	1 cut(s)	1169
HaeIII	GGCC	5 cut(s)	186, 448, 1628, 1937, 2366
HapII	CCGG	4 cut(s)	693, 1340, 1991, 2196
HgaI	GACGC	1 cut(s)	2474
HhaI	GCGC	2 cut(s)	1168, 2056
Hin6I	GCGC	2 cut(s)	1166, 2054
HinP1I	GCGC	2 cut(s)	1166, 2054
HincII	GTYRAC	1 cut(s)	2353
HindII	GTYRAC	1 cut(s)	2353
HindIII	AAGCTT	1 cut(s)	1503
HpaI	GTTAAC	1 cut(s)	2353
HpaII	CCGG	4 cut(s)	693, 1340, 1991, 2196
HphI	GGTGA	6 cut(s)	647, 743, 1654, 1670, 2144, 2425
Hpy166II	GTNNAC	5 cut(s)	324, 646, 2290, 2353, 2416
Hpy188I	TCNGA	5 cut(s)	235, 398, 1333, 1592, 1615
Hpy8I	GTNNAC	5 cut(s)	324, 646, 2290, 2353, 2416
HpyAV	CCTTC	8 cut(s)	176, 380, 434, 866, 1001, 1348, 1571, 1979
HpyCH4IV	ACGT	3 cut(s)	192, 2281, 2745
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1457, 1727, 2062, 2320, 2822
HpySE526I	ACGT	3 cut(s)	192, 2281, 2745
HspAI	GCGC	2 cut(s)	1166, 2054
Kpn2I	TCCGGA	2 cut(s)	1339, 1990
Ksp22I	TGATCA	1 cut(s)	1644
KspAI	GTTAAC	1 cut(s)	2353
LguI	GCTCTTC	1 cut(s)	1737
LmnI	GCTCC	5 cut(s)	455, 1020, 1567, 2389, 2438
Lsp1109I	GCAGC	5 cut(s)	112, 1092, 1196, 1350, 2875
LweI	GCATC	6 cut(s)	1027, 1303, 1691, 1702, 2137, 2868
MabI	ACCWGGT	1 cut(s)	631
MaeI	CTAG	4 cut(s)	431, 2069, 2180, 2817
MaeII	ACGT	3 cut(s)	192, 2281, 2745
MbiI	CCGCTC	1 cut(s)	1881
MfeI	CAATTG	3 cut(s)	1046, 2256, 2883
MflI	RGATCY	3 cut(s)	170, 1786, 1837
MhlI	GDGCHC	5 cut(s)	267, 460, 1597, 2386, 2443
MlsI	TGGCCA	2 cut(s)	448, 1628
MluNI	TGGCCA	2 cut(s)	448, 1628
MlyI	GAGTC	3 cut(s)	376, 1135, 1871
MmeI	TCCRAC	5 cut(s)	47, 406, 1545, 1820, 2476
Mox20I	TGGCCA	2 cut(s)	448, 1628
Mph1103I	ATGCAT	1 cut(s)	1277
MroI	TCCGGA	2 cut(s)	1339, 1990
MroXI	GAANNNNTTC	3 cut(s)	369, 1504, 1665
MscI	TGGCCA	2 cut(s)	448, 1628
MslI	CAYNNNNRTG	5 cut(s)	251, 1280, 2258, 2423, 2774
Msp20I	TGGCCA	2 cut(s)	448, 1628
MspA1I	CMGCKG	2 cut(s)	1886, 2323
MspI	CCGG	4 cut(s)	693, 1340, 1991, 2196
MspR9I	CCNGG	3 cut(s)	633, 1851, 2084
MunI	CAATTG	3 cut(s)	1046, 2256, 2883
MvaI	CCWGG	3 cut(s)	633, 1851, 2084
MvnI	CGCG	3 cut(s)	292, 2056, 2698
MwoI	GCNNNNNNNGC	5 cut(s)	1457, 1727, 2062, 2320, 2822
NcoI	CCATGG	1 cut(s)	2184
NheI	GCTAGC	1 cut(s)	2816
NlaIV	GGNNCC	2 cut(s)	172, 1788
NmeAIII	GCCGAG	1 cut(s)	2342
NmuCI	GTSAC	8 cut(s)	53, 107, 505, 958, 1117, 1223, 1634, 2260
NsiI	ATGCAT	1 cut(s)	1277
NspV	TTCGAA	1 cut(s)	1735
OliI	CACNNNNGTG	2 cut(s)	2258, 2774
PagI	TCATGA	2 cut(s)	460, 2161
PciSI	GCTCTTC	1 cut(s)	1737
PdmI	GAANNNNTTC	3 cut(s)	369, 1504, 1665
PfeI	GAWTC	8 cut(s)	716, 1343, 1773, 1957, 2008, 2597, 2624, 2905
PflMI	CCANNNNNTGG	1 cut(s)	1802
PkrI	GCNGC	7 cut(s)	102, 139, 1107, 1186, 1365, 1880, 2890
PleI	GAGTC	3 cut(s)	376, 1134, 1870
PpsI	GAGTC	3 cut(s)	376, 1134, 1870
PshBI	ATTAAT	1 cut(s)	315
Psp124BI	GAGCTC	1 cut(s)	460
Psp6I	CCWGG	3 cut(s)	631, 1849, 2082
PspEI	GGTNACC	1 cut(s)	817
PspFI	CCCAGC	1 cut(s)	2152
PspGI	CCWGG	3 cut(s)	631, 1849, 2082
PspN4I	GGNNCC	2 cut(s)	172, 1788
PspPI	GGNCC	4 cut(s)	1988, 2100, 2618, 2635
PstI	CTGCAG	1 cut(s)	676
PsuI	RGATCY	3 cut(s)	170, 1786, 1837
PvuII	CAGCTG	2 cut(s)	1886, 2323
RsaI	GTAC	2 cut(s)	645, 669
RsaNI	GTAC	2 cut(s)	644, 668
RseI	CAYNNNNRTG	5 cut(s)	251, 1280, 2258, 2423, 2774
SacI	GAGCTC	1 cut(s)	460
SapI	GCTCTTC	1 cut(s)	1737
SatI	GCNGC	7 cut(s)	101, 138, 1106, 1185, 1364, 1879, 2889
Sau96I	GGNCC	4 cut(s)	1988, 2100, 2618, 2635
SchI	GAGTC	3 cut(s)	376, 1135, 1871
ScrFI	CCNGG	3 cut(s)	633, 1851, 2084
SduI	GDGCHC	5 cut(s)	267, 460, 1597, 2386, 2443
SexAI	ACCWGGT	1 cut(s)	631
SfaNI	GCATC	6 cut(s)	1027, 1303, 1691, 1702, 2137, 2868
SfcI	CTRYAG	2 cut(s)	536, 672
SfuI	TTCGAA	1 cut(s)	1735
SinI	GGWCC	4 cut(s)	1988, 2100, 2618, 2635
SmiMI	CAYNNNNRTG	5 cut(s)	251, 1280, 2258, 2423, 2774
SmlI	CTYRAG	1 cut(s)	2095
SmoI	CTYRAG	1 cut(s)	2095
SsiI	CCGC	3 cut(s)	137, 1879, 2489
SspI	AATATT	5 cut(s)	1374, 1921, 2335, 2539, 2604
SspMI	CTAG	4 cut(s)	431, 2069, 2180, 2817
SstI	GAGCTC	1 cut(s)	460
StyD4I	CCNGG	3 cut(s)	631, 1849, 2082
StyI	CCWWGG	2 cut(s)	1747, 2184
TaiI	ACGT	3 cut(s)	195, 2284, 2748
TaqI	TCGA	3 cut(s)	994, 1735, 2796
TatI	WGTACW	1 cut(s)	643
TauI	GCSGC	2 cut(s)	140, 1881
TfiI	GAWTC	8 cut(s)	716, 1343, 1773, 1957, 2008, 2597, 2624, 2905
TseFI	GTSAC	8 cut(s)	53, 107, 505, 958, 1117, 1223, 1634, 2260
TseI	GCWGC	5 cut(s)	100, 1105, 1184, 1363, 2888
Tsp45I	GTSAC	8 cut(s)	53, 107, 505, 958, 1117, 1223, 1634, 2260
Van91I	CCANNNNNTGG	1 cut(s)	1802
VpaK11BI	GGWCC	4 cut(s)	1988, 2100, 2618, 2635
VspI	ATTAAT	1 cut(s)	315
XagI	CCTNNNNNAGG	1 cut(s)	1578
XapI	RAATTY	5 cut(s)	206, 1994, 2040, 2306, 2509
XbaI	TCTAGA	1 cut(s)	2068
XmnI	GAANNNNTTC	3 cut(s)	369, 1504, 1665
XspI	CTAG	4 cut(s)	431, 2069, 2180, 2817
Zsp2I	ATGCAT	1 cut(s)	1277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.