Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0011654

Physical Location & Seq

Genomic Coordinates Reverse (-)

19802525 .. 19807810

Gene Structure 5286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG210900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGCTTAATCAAAATTTCTGGTGTGGTGCAGGTGTACAGCCAAGTGACTATGTTCTACCTCAGGAAGTTAAAGCGGCAGGTTTTGGTATCTGTGCTGATGAATTGGGATCCATTGTGGAAGGCCATGATGTAAAGAAGCTAAAATTTCATGGAGGGGTAACTAGTCTTTCAGAAAAGCTCTCCACATCTATAAATGATGGACTCAATACCGAAACTGATTTGCACACGCGAAGACAAGAGATTTATGGCATTAATAAGTTTACAGAGAGCGAACAGCGTGGTTTCTTTGTATTTGTTTGGGAAGCCCTTCAGGACATGACTCTTATGATCCTCGGAGTGTGTGCTTTTGTGTCATTGATCGTTGGACTAGCAATGGAAGGATGGCCAGCAGGAGCTCATGATGGGCTTGGAATTGTTGCGAGTATTATGCTGGTTGTGTTTGTCACGGCAACAAGTGATTATCGGCAATCACTACAGTTCAGGGACTTGGACAAGGAGAAGAAGAAGATTGCTATGCAAGTAACAAGAAATGGATATAGGCAGAAAATGTCTATTTATGAATTACTACCTGGTGATATTGTACACCTTTCTATTGGAGACCAAGTACCTGCAGATGGTCTATTTGTTTCTGGTTTTTCTGTCTTAATTGATGAATCCAGTTTAACTGGTGAGAGTGAGCCTATTATGGTAACTCTTGAAAATCCCTTTCTTCTTTCTGGAACTAAGGTTCAAGATGGATCATGCAAGATGATGGTTACCACAGTCGGGATGAGAACTCAATGGGGAAAATTGATGGCTACACTAAGTGAAGGTGGAGATGATGAAACCCCATTGCAGGTCAAGTTGAATGGAGTGGCAACCATTATTGGTAAGATAGGACTTTTCTTTGCTGTTGTGACTTTTGCTGTTATGGTGCAAGGACTGTTTAGTCGAAAACTGCAAGAAGGGACACACTGGAGCTGGAATGGAGATGATGCAATGCAATTGTTAGAGTTCTTTGCTGTTGCAGTTACGATTGTTGTTGTTGCTGTCCCTGAGGGGCTGCCACTGGCTGTGACATTGAGTCTTGCATTTGCCATGAAGAAAATGATGAATGATAAGGCGCTTGTTCGCCATCTGGCAGCTTGCGAAACTATGGGATCAGCCACGAACATTTGCAGTGACAAAACTGGGACACTGACAACCAACAAAATGACTGTTGTGAAGTCATGCATTTGCATGAATGTCAAAGATGTGAGCAACCTCAGTGATGCTTCAAGCCTGTTCTCTGATCTTCCGGAATCTGTTAAGAAGGTTTTGCTGCAATCAATATTTAACAACACTGGTGGAGAAGTTGTGGTTAGCAAAGGTGGTAAGAATGAGATGTTGGGAACACCTACTGACACTGCTTTGTTGGCGTTTGGCTTGGCACTTGGTGGAGATTTTCAAGCAGAAAGAAAAGCTTCTAAACTTGTGAAAGTTGAGCCTTTCAACTCAACGAAGAAAAGAATGGGGGTCGTCTTGGAGCTTCCTGAAGGAGGAGGTTTCAGAGCACATACTAAAGGTGCTTCAGAAATCATTTTGGCCAACTGTGATAAGGTGATCAATTCAAAGGGTGAAACTGTTCCTCTTGATGAAGCATCCATTAAGCATCTCCAAGCTACTATCAATGATTTTGCTTGTGAGGCTCTTCGAACTATCTGCCTTGGCTATATGGAATTAGAAAAAGGATTCTCTGCTGAGGATCCCATTCCAACTTCTGGATATACTTGCATAGGAATTGTTGGCATTAAAGATCCTGTTCGTCCCGGTGTCAAGGAGTCTGTTGCAGTTTGCCGTTCAGCTGGTATCACAGTAAGAATGGTTACAGGAGACAATATTAACACTGCAAAGGCCATAGCAAGGGAATGTGGGATTCTCACTGATGATGGATTAGCCATTGAAGGTCCGGAGTTCAGGGAGAAGAATCAAGAAGAATTGCTTTCACTGATACCTAAAATTCAGGTTATGGCGCGATCATCGCCTCTAGACAAGCATACCCTGGTAAAGCACTTGAGGACCACATTTGATGAAGTCGTTGCTGTAACTGGTGATGGAACAAATGATGCCCCAGCACTTCATGAGGCAGATATTGGACTAGCCATGGGCATTGCCGGAACTGAGGTGAGAATGATATGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0008150 GO:0008324 GO:0009555 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042175 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

720

Amino Acids

77.54

Weight (kDa)

5.34

Isoelectric Point (pI)

30.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	51 - 118	1e-09	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	171 - 267	2.6e-21	P-type ATPase actuator domain
Cation_ATPase	PF13246	448 - 596	4.9e-33	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	568 - 703	1.3e-11	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22950 AT4G37640
fragaria_vesca	FvH4_1g17620
malus_domestica	MD02G1185000.v1.1 MD15G1296400.v1.1
prunus_persica	Prupe.6G221800_v2.0.a1 Prupe.6G221800_v2.0.a1
pyrus_communis	pycom02g14990 pycom15g25970
rosa_chinensis	RchiOBHm_Chr2g0107911
rosa_laevigata	RLG00000017627
rosa_multiflora	Rmu_sc0001484.1_g000032
rosa_roxburghii	Rroxscaffold_2G00135800
rosa_rugosa	Rorug02G0148700 Rorug02G0148800 Rorug02G0148800
rosa_samantha	Rh2BG210900 Rh2CG202700
rosa_wichuraiana	Rw2G015710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	20
AasI	GACNNNNNNGTC	1 cut(s)	927
Acc36I	ACCTGC	4 cut(s)	20, 68, 616, 826
AccB7I	CCANNNNNTGG	1 cut(s)	1739
AccII	CGCG	2 cut(s)	229, 1993
AccIII	TCCGGA	2 cut(s)	1276, 1927
AciI	CCGC	1 cut(s)	74
AclWI	GGATC	8 cut(s)	102, 115, 322, 745, 1147, 1718, 1731, 1769
AcoI	YGGCCR	2 cut(s)	383, 1563
AcsI	RAATTY	3 cut(s)	13, 143, 1977
AcuI	CTGAAG	3 cut(s)	293, 1533, 1533
AdeI	CACNNNGTG	2 cut(s)	806, 1415
AfaI	GTAC	3 cut(s)	36, 582, 606
AfiI	CCNNNNNNNGG	6 cut(s)	614, 765, 835, 1517, 1739, 1881
AgsI	TTSAA	8 cut(s)	698, 731, 847, 1257, 1427, 1471, 1590, 1922
AhdI	GACNNNNNGTC	1 cut(s)	1062
AhlI	ACTAGT	1 cut(s)	161
AjnI	CCWGG	2 cut(s)	568, 2019
AjuI	GAANNNNNNNTTGG	2 cut(s)	1349, 1381
AloI	GAACNNNNNNTCC	2 cut(s)	711, 743
AluBI	AGCT	9 cut(s)	139, 178, 395, 960, 1124, 1442, 1507, 1640, 1823
AluI	AGCT	9 cut(s)	139, 178, 395, 960, 1124, 1442, 1507, 1640, 1823
Alw21I	GWGCWC	2 cut(s)	397, 1534
Alw26I	GTCTC	2 cut(s)	591, 1845
AlwI	GGATC	8 cut(s)	102, 115, 322, 745, 1147, 1718, 1731, 1769
Aor13HI	TCCGGA	2 cut(s)	1276, 1927
AoxI	GGCC	4 cut(s)	121, 383, 1563, 1872
ApeKI	GCWGC	3 cut(s)	1042, 1121, 1300
ApoI	RAATTY	3 cut(s)	13, 143, 1977
AseI	ATTAAT	1 cut(s)	252
Asp700I	GAANNNNTTC	3 cut(s)	306, 1441, 1602
AspLEI	GCGC	2 cut(s)	1105, 1993
AspS9I	GGNCC	2 cut(s)	1925, 2037
AsuC2I	CCSGG	1 cut(s)	1788
AsuHPI	GGTGA	6 cut(s)	584, 680, 1591, 1607, 2081, 2155
AsuII	TTCGAA	1 cut(s)	1672
AvaII	GGWCC	2 cut(s)	1925, 2037
AxyI	CCTNAGG	2 cut(s)	60, 1035
BalI	TGGCCA	2 cut(s)	385, 1565
BamHI	GGATCC	2 cut(s)	107, 1723
BanII	GRGCYC	1 cut(s)	397
BbsI	GAAGAC	1 cut(s)	238
Bbv12I	GWGCWC	2 cut(s)	397, 1534
BbvCI	CCTCAGC	1 cut(s)	1719
BbvI	GCAGC	3 cut(s)	1029, 1133, 1287
BceAI	ACGGC	2 cut(s)	462, 1800
BcgI	CGANNNNNNTGC	4 cut(s)	409, 443, 1662, 1696
BciT130I	CCWGG	2 cut(s)	570, 2021
BclI	TGATCA	1 cut(s)	1581
BcnI	CCSGG	1 cut(s)	1788
BcoDI	GTCTC	2 cut(s)	591, 1845
BcuI	ACTAGT	1 cut(s)	161
BfaI	CTAG	4 cut(s)	162, 368, 2006, 2117
BfmI	CTRYAG	2 cut(s)	473, 609
BfoI	RGCGCY	1 cut(s)	1106
BfuAI	ACCTGC	4 cut(s)	20, 68, 616, 826
BisI	GCNGC	4 cut(s)	75, 1043, 1122, 1301
BlsI	GCNGC	4 cut(s)	76, 1044, 1123, 1302
Bme1390I	CCNGG	3 cut(s)	570, 1788, 2021
Bme18I	GGWCC	2 cut(s)	1925, 2037
BmeRI	GACNNNNNGTC	1 cut(s)	1062
BmgT120I	GGNCC	2 cut(s)	1925, 2037
BmiI	GGNNCC	2 cut(s)	109, 1725
BmrFI	CCNGG	3 cut(s)	570, 1788, 2021
BmrI	ACTGGG	1 cut(s)	1179
BmsI	GCATC	5 cut(s)	964, 1240, 1628, 1639, 2074
BmuI	ACTGGG	1 cut(s)	1179
BpiI	GAAGAC	1 cut(s)	238
BpmI	CTGGAG	1 cut(s)	976
Bpu10I	CCTNAGC	1 cut(s)	1719
Bpu14I	TTCGAA	1 cut(s)	1672
BpuEI	CTTGAG	1 cut(s)	2053
BpuMI	CCSGG	1 cut(s)	1788
BsaI	GGTCTC	1 cut(s)	591
BsaJI	CCNNGG	4 cut(s)	331, 1684, 2019, 2121
BsaWI	WCCGGW	2 cut(s)	1276, 1927
BsaXI	ACNNNNNCTCC	4 cut(s)	588, 618, 1320, 1350
Bsc4I	CCNNNNNNNGG	6 cut(s)	614, 765, 835, 1517, 1739, 1881
Bse1I	ACTGG	7 cut(s)	657, 670, 959, 1053, 1174, 1327, 2071
Bse21I	CCTNAGG	2 cut(s)	60, 1035
Bse3DI	GCAATG	4 cut(s)	378, 830, 984, 2127
BseAI	TCCGGA	2 cut(s)	1276, 1927
BseBI	CCWGG	2 cut(s)	570, 2021
BseDI	CCNNGG	4 cut(s)	331, 1684, 2019, 2121
BseGI	GGATG	3 cut(s)	386, 774, 1619
BseLI	CCNNNNNNNGG	6 cut(s)	614, 765, 835, 1517, 1739, 1881
BseMI	GCAATG	4 cut(s)	378, 830, 984, 2127
BseMII	CTCAG	5 cut(s)	74, 1026, 1258, 1710, 2130
BseNI	ACTGG	7 cut(s)	657, 670, 959, 1053, 1174, 1327, 2071
BseRI	GAGGAG	1 cut(s)	1533
BseXI	GCAGC	3 cut(s)	1029, 1133, 1287
BseYI	CCCAGC	1 cut(s)	2089
BsgI	GTGCAG	1 cut(s)	48
Bsh1236I	CGCG	2 cut(s)	229, 1993
BshFI	GGCC	4 cut(s)	123, 385, 1565, 1874
BsiHKAI	GWGCWC	2 cut(s)	397, 1534
BsiSI	CCGG	4 cut(s)	1277, 1788, 1928, 2133
BslFI	GGGAC	5 cut(s)	497, 961, 1016, 1186, 1770
BslI	CCNNNNNNNGG	6 cut(s)	614, 765, 835, 1517, 1739, 1881
BsmAI	GTCTC	2 cut(s)	591, 1845
BsmFI	GGGAC	5 cut(s)	497, 961, 1016, 1186, 1770
BsnI	GGCC	4 cut(s)	123, 385, 1565, 1874
Bso31I	GGTCTC	1 cut(s)	591
Bsp119I	TTCGAA	1 cut(s)	1672
Bsp1286I	GDGCHC	2 cut(s)	397, 1534
Bsp13I	TCCGGA	2 cut(s)	1276, 1927
Bsp1407I	TGTACA	2 cut(s)	34, 580
Bsp19I	CCATGG	1 cut(s)	2121
BspACI	CCGC	1 cut(s)	74
BspANI	GGCC	4 cut(s)	123, 385, 1565, 1874
BspCNI	CTCAG	5 cut(s)	73, 1027, 1257, 1711, 2131
BspEI	TCCGGA	2 cut(s)	1276, 1927
BspFNI	CGCG	2 cut(s)	229, 1993
BspHI	TCATGA	2 cut(s)	397, 2098
BspLI	GGNNCC	2 cut(s)	109, 1725
BspMAI	CTGCAG	1 cut(s)	613
BspMI	ACCTGC	4 cut(s)	20, 68, 616, 826
BspPI	GGATC	8 cut(s)	102, 115, 322, 745, 1147, 1718, 1731, 1769
BspQI	GCTCTTC	1 cut(s)	1674
BspT104I	TTCGAA	1 cut(s)	1672
BspTNI	GGTCTC	1 cut(s)	591
BsrDI	GCAATG	4 cut(s)	378, 830, 984, 2127
BsrGI	TGTACA	2 cut(s)	34, 580
BsrI	ACTGG	7 cut(s)	657, 670, 959, 1053, 1174, 1327, 2071
BssECI	CCNNGG	4 cut(s)	331, 1684, 2019, 2121
BssT1I	CCWWGG	2 cut(s)	1684, 2121
Bst2UI	CCWGG	2 cut(s)	570, 2021
Bst4CI	ACNGT	7 cut(s)	477, 763, 924, 1198, 1571, 1603, 1834
Bst6I	CTCTTC	1 cut(s)	1674
BstAUI	TGTACA	2 cut(s)	34, 580
BstBI	TTCGAA	1 cut(s)	1672
BstC8I	GCNNGC	2 cut(s)	387, 1126
BstDEI	CTNAG	7 cut(s)	60, 723, 803, 1035, 1244, 1719, 2139
BstDSI	CCRYGG	1 cut(s)	2121
BstEII	GGTNACC	1 cut(s)	754
BstENI	CCTNNNNNAGG	1 cut(s)	1515
BstF5I	GGATG	3 cut(s)	386, 774, 1619
BstFNI	CGCG	2 cut(s)	229, 1993
BstH2I	RGCGCY	1 cut(s)	1106
BstHHI	GCGC	2 cut(s)	1105, 1993
BstMAI	GTCTC	2 cut(s)	591, 1845
BstMWI	GCNNNNNNNGC	3 cut(s)	1394, 1664, 1999
BstNI	CCWGG	2 cut(s)	570, 2021
BstPI	GGTNACC	1 cut(s)	754
BstSCI	CCNGG	3 cut(s)	568, 1786, 2019
BstSFI	CTRYAG	2 cut(s)	473, 609
BstUI	CGCG	2 cut(s)	229, 1993
BstV1I	GCAGC	3 cut(s)	1029, 1133, 1287
BstV2I	GAAGAC	1 cut(s)	238
BstX2I	RGATCY	3 cut(s)	107, 1723, 1774
BstYI	RGATCY	3 cut(s)	107, 1723, 1774
Bsu36I	CCTNAGG	2 cut(s)	60, 1035
BsuRI	GGCC	4 cut(s)	123, 385, 1565, 1874
BtgI	CCRYGG	1 cut(s)	2121
BtgZI	GCGATG	1 cut(s)	1983
BtsCI	GGATG	3 cut(s)	386, 774, 1619
BtsI	GCAGTG	3 cut(s)	1165, 1383, 1863
BveI	ACCTGC	4 cut(s)	20, 68, 616, 826
Cac8I	GCNNGC	2 cut(s)	387, 1126
CciI	TCATGA	2 cut(s)	397, 2098
CfoI	GCGC	2 cut(s)	1105, 1993
Cfr13I	GGNCC	2 cut(s)	1925, 2037
CsiI	ACCWGGT	1 cut(s)	568
Csp6I	GTAC	3 cut(s)	35, 581, 605
CspCI	CAANNNNNGTGG	2 cut(s)	1306, 1341
CviQI	GTAC	3 cut(s)	35, 581, 605
DdeI	CTNAG	7 cut(s)	60, 723, 803, 1035, 1244, 1719, 2139
DraIII	CACNNNGTG	2 cut(s)	806, 1415
DrdI	GACNNNNNNGTC	1 cut(s)	927
DriI	GACNNNNNGTC	1 cut(s)	1062
DseDI	GACNNNNNNGTC	1 cut(s)	927
EaeI	YGGCCR	2 cut(s)	383, 1563
Eam1104I	CTCTTC	1 cut(s)	1674
Eam1105I	GACNNNNNGTC	1 cut(s)	1062
EarI	CTCTTC	1 cut(s)	1674
Ecl136II	GAGCTC	1 cut(s)	395
Eco130I	CCWWGG	2 cut(s)	1684, 2121
Eco24I	GRGCYC	1 cut(s)	397
Eco31I	GGTCTC	1 cut(s)	591
Eco47I	GGWCC	2 cut(s)	1925, 2037
Eco53kI	GAGCTC	1 cut(s)	395
Eco57I	CTGAAG	3 cut(s)	293, 1533, 1533
Eco81I	CCTNAGG	2 cut(s)	60, 1035
Eco91I	GGTNACC	1 cut(s)	754
EcoICRI	GAGCTC	1 cut(s)	395
EcoNI	CCTNNNNNAGG	1 cut(s)	1515
EcoO65I	GGTNACC	1 cut(s)	754
EcoRII	CCWGG	2 cut(s)	568, 2019
EcoT14I	CCWWGG	2 cut(s)	1684, 2121
EcoT22I	ATGCAT	1 cut(s)	1214
EcoT38I	GRGCYC	1 cut(s)	397
ErhI	CCWWGG	2 cut(s)	1684, 2121
FalI	AAGNNNNNCTT	4 cut(s)	1426, 1458, 1944, 1976
FaqI	GGGAC	5 cut(s)	497, 961, 1016, 1186, 1770
FbaI	TGATCA	1 cut(s)	1581
Fnu4HI	GCNGC	4 cut(s)	75, 1043, 1122, 1301
FokI	GGATG	3 cut(s)	393, 781, 1606
FriOI	GRGCYC	1 cut(s)	397
Fsp4HI	GCNGC	4 cut(s)	75, 1043, 1122, 1301
FspBI	CTAG	4 cut(s)	162, 368, 2006, 2117
GlaI	GCGC	2 cut(s)	1104, 1992
GluI	GCNGC	4 cut(s)	75, 1043, 1122, 1301
GsaI	CCCAGC	1 cut(s)	2093
GsuI	CTGGAG	1 cut(s)	976
HaeII	RGCGCY	1 cut(s)	1106
HaeIII	GGCC	4 cut(s)	123, 385, 1565, 1874
HapII	CCGG	4 cut(s)	1277, 1788, 1928, 2133
HhaI	GCGC	2 cut(s)	1105, 1993
Hin6I	GCGC	2 cut(s)	1103, 1991
HinP1I	GCGC	2 cut(s)	1103, 1991
HindIII	AAGCTT	1 cut(s)	1440
HinfI	GANTC	9 cut(s)	201, 319, 653, 1063, 1280, 1710, 1799, 1894, 1945
HpaII	CCGG	4 cut(s)	1277, 1788, 1928, 2133
HphI	GGTGA	6 cut(s)	584, 680, 1591, 1607, 2081, 2155
Hpy166II	GTNNAC	3 cut(s)	35, 261, 583
Hpy188I	TCNGA	5 cut(s)	172, 335, 1270, 1529, 1552
Hpy8I	GTNNAC	3 cut(s)	35, 261, 583
HpyAV	CCTTC	8 cut(s)	113, 317, 371, 803, 938, 1285, 1508, 1916
HpyCH4III	ACNGT	7 cut(s)	477, 763, 924, 1198, 1571, 1603, 1834
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1394, 1664, 1999
HpyF3I	CTNAG	7 cut(s)	60, 723, 803, 1035, 1244, 1719, 2139
HspAI	GCGC	2 cut(s)	1103, 1991
Kpn2I	TCCGGA	2 cut(s)	1276, 1927
Ksp22I	TGATCA	1 cut(s)	1581
LguI	GCTCTTC	1 cut(s)	1674
LmnI	GCTCC	3 cut(s)	392, 957, 1504
Lsp1109I	GCAGC	3 cut(s)	1029, 1133, 1287
LweI	GCATC	5 cut(s)	964, 1240, 1628, 1639, 2074
MabI	ACCWGGT	1 cut(s)	568
MaeI	CTAG	4 cut(s)	162, 368, 2006, 2117
MfeI	CAATTG	1 cut(s)	983
MflI	RGATCY	3 cut(s)	107, 1723, 1774
MhlI	GDGCHC	2 cut(s)	397, 1534
MlsI	TGGCCA	2 cut(s)	385, 1565
MluNI	TGGCCA	2 cut(s)	385, 1565
MlyI	GAGTC	4 cut(s)	195, 313, 1072, 1808
MmeI	TCCRAC	2 cut(s)	343, 1757
Mox20I	TGGCCA	2 cut(s)	385, 1565
Mph1103I	ATGCAT	1 cut(s)	1214
MroI	TCCGGA	2 cut(s)	1276, 1927
MroXI	GAANNNNTTC	3 cut(s)	306, 1441, 1602
MscI	TGGCCA	2 cut(s)	385, 1565
MslI	CAYNNNNRTG	1 cut(s)	1217
Msp20I	TGGCCA	2 cut(s)	385, 1565
MspA1I	CMGCKG	1 cut(s)	1823
MspI	CCGG	4 cut(s)	1277, 1788, 1928, 2133
MspR9I	CCNGG	3 cut(s)	570, 1788, 2021
MunI	CAATTG	1 cut(s)	983
MvaI	CCWGG	2 cut(s)	570, 2021
MvnI	CGCG	2 cut(s)	229, 1993
MwoI	GCNNNNNNNGC	3 cut(s)	1394, 1664, 1999
NciI	CCSGG	1 cut(s)	1788
NcoI	CCATGG	1 cut(s)	2121
NlaIV	GGNNCC	2 cut(s)	109, 1725
NmuCI	GTSAC	5 cut(s)	44, 442, 895, 1054, 1160
NsiI	ATGCAT	1 cut(s)	1214
NspV	TTCGAA	1 cut(s)	1672
PagI	TCATGA	2 cut(s)	397, 2098
PaqCI	CACCTGC	1 cut(s)	20
PciSI	GCTCTTC	1 cut(s)	1674
PdmI	GAANNNNTTC	3 cut(s)	306, 1441, 1602
PfeI	GAWTC	5 cut(s)	653, 1280, 1710, 1894, 1945
PflMI	CCANNNNNTGG	1 cut(s)	1739
PkrI	GCNGC	4 cut(s)	76, 1044, 1123, 1302
PleI	GAGTC	4 cut(s)	195, 313, 1071, 1807
PpsI	GAGTC	4 cut(s)	195, 313, 1071, 1807
PshBI	ATTAAT	1 cut(s)	252
Psp124BI	GAGCTC	1 cut(s)	397
Psp6I	CCWGG	2 cut(s)	568, 2019
PspEI	GGTNACC	1 cut(s)	754
PspFI	CCCAGC	1 cut(s)	2089
PspGI	CCWGG	2 cut(s)	568, 2019
PspN4I	GGNNCC	2 cut(s)	109, 1725
PspPI	GGNCC	2 cut(s)	1925, 2037
PstI	CTGCAG	1 cut(s)	613
PsuI	RGATCY	3 cut(s)	107, 1723, 1774
PvuII	CAGCTG	1 cut(s)	1823
RsaI	GTAC	3 cut(s)	36, 582, 606
RsaNI	GTAC	3 cut(s)	35, 581, 605
RseI	CAYNNNNRTG	1 cut(s)	1217
SacI	GAGCTC	1 cut(s)	397
SapI	GCTCTTC	1 cut(s)	1674
SatI	GCNGC	4 cut(s)	75, 1043, 1122, 1301
Sau96I	GGNCC	2 cut(s)	1925, 2037
SchI	GAGTC	4 cut(s)	195, 313, 1072, 1808
ScrFI	CCNGG	3 cut(s)	570, 1788, 2021
SduI	GDGCHC	2 cut(s)	397, 1534
SexAI	ACCWGGT	1 cut(s)	568
SfaNI	GCATC	5 cut(s)	964, 1240, 1628, 1639, 2074
SfcI	CTRYAG	2 cut(s)	473, 609
SfuI	TTCGAA	1 cut(s)	1672
SinI	GGWCC	2 cut(s)	1925, 2037
SmiMI	CAYNNNNRTG	1 cut(s)	1217
SmlI	CTYRAG	1 cut(s)	2032
SmoI	CTYRAG	1 cut(s)	2032
SpeI	ACTAGT	1 cut(s)	161
SsiI	CCGC	1 cut(s)	74
SspI	AATATT	2 cut(s)	1311, 1858
SspMI	CTAG	4 cut(s)	162, 368, 2006, 2117
SstI	GAGCTC	1 cut(s)	397
StyD4I	CCNGG	3 cut(s)	568, 1786, 2019
StyI	CCWWGG	2 cut(s)	1684, 2121
TaaI	ACNGT	7 cut(s)	477, 763, 924, 1198, 1571, 1603, 1834
TaqI	TCGA	2 cut(s)	931, 1672
TatI	WGTACW	2 cut(s)	34, 580
TauI	GCSGC	1 cut(s)	77
TfiI	GAWTC	5 cut(s)	653, 1280, 1710, 1894, 1945
TseFI	GTSAC	5 cut(s)	44, 442, 895, 1054, 1160
TseI	GCWGC	3 cut(s)	1042, 1121, 1300
Tsp45I	GTSAC	5 cut(s)	44, 442, 895, 1054, 1160
Van91I	CCANNNNNTGG	1 cut(s)	1739
VpaK11BI	GGWCC	2 cut(s)	1925, 2037
VspI	ATTAAT	1 cut(s)	252
XagI	CCTNNNNNAGG	1 cut(s)	1515
XapI	RAATTY	3 cut(s)	13, 143, 1977
XbaI	TCTAGA	1 cut(s)	2005
XmnI	GAANNNNTTC	3 cut(s)	306, 1441, 1602
XspI	CTAG	4 cut(s)	162, 368, 2006, 2117
Zsp2I	ATGCAT	1 cut(s)	1214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.