50S ribosomal protein 5
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G56910 |
| fragaria_vesca | FvH4_7g05170 |
| malus_domestica | MD02G1260500.v1.1 MD07G1060800.v1.1 |
| prunus_persica | Prupe.2G065900_v2.0.a1 |
| pyrus_communis | pycom02g22240 pycom07g04660 |
| rosa_chinensis | RchiOBHm_Chr1g0331611 |
| rosa_laevigata | RLG00000029726 |
| rosa_multiflora | Rmu_sc0005044.1_g000016 |
| rosa_roxburghii | Rroxscaffold_4G00319020 |
| rosa_rugosa | Rorug01G0095300 |
| rosa_samantha | Rh1AG118900 Rh1BG090600 Rh1CG113900 Rh1DG123300 |
| rosa_wichuraiana | Rw1G009570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 406 |
| AccB1I | GGYRCC | 1 cut(s) | 406 |
| AccI | GTMKAC | 1 cut(s) | 414 |
| AciI | CCGC | 2 cut(s) | 153, 273 |
| AcsI | RAATTY | 1 cut(s) | 83 |
| AcuI | CTGAAG | 1 cut(s) | 297 |
| AfaI | GTAC | 1 cut(s) | 408 |
| AgsI | TTSAA | 2 cut(s) | 68, 88 |
| AluBI | AGCT | 3 cut(s) | 311, 421, 439 |
| AluI | AGCT | 3 cut(s) | 311, 421, 439 |
| Alw21I | GWGCWC | 1 cut(s) | 107 |
| Alw26I | GTCTC | 1 cut(s) | 192 |
| AoxI | GGCC | 3 cut(s) | 327, 399, 545 |
| ApeKI | GCWGC | 3 cut(s) | 353, 356, 439 |
| ApoI | RAATTY | 1 cut(s) | 83 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 266 |
| Asp718I | GGTACC | 1 cut(s) | 406 |
| AsuHPI | GGTGA | 2 cut(s) | 139, 192 |
| BanI | GGYRCC | 1 cut(s) | 406 |
| BanII | GRGCYC | 1 cut(s) | 378 |
| BbsI | GAAGAC | 1 cut(s) | 110 |
| Bbv12I | GWGCWC | 1 cut(s) | 107 |
| BbvI | GCAGC | 3 cut(s) | 340, 343, 426 |
| BccI | CCATC | 4 cut(s) | 106, 338, 537, 559 |
| BceAI | ACGGC | 2 cut(s) | 169, 386 |
| BcoDI | GTCTC | 1 cut(s) | 192 |
| BfaI | CTAG | 1 cut(s) | 452 |
| BisI | GCNGC | 3 cut(s) | 354, 357, 440 |
| BlsI | GCNGC | 3 cut(s) | 355, 358, 441 |
| BmiI | GGNNCC | 2 cut(s) | 408, 503 |
| BmsI | GCATC | 3 cut(s) | 222, 265, 459 |
| BpiI | GAAGAC | 1 cut(s) | 110 |
| BpuEI | CTTGAG | 1 cut(s) | 113 |
| BsaJI | CCNNGG | 1 cut(s) | 402 |
| Bse1I | ACTGG | 1 cut(s) | 480 |
| BseDI | CCNNGG | 1 cut(s) | 402 |
| BseGI | GGATG | 2 cut(s) | 237, 256 |
| BseMII | CTCAG | 1 cut(s) | 518 |
| BseNI | ACTGG | 1 cut(s) | 480 |
| BseRI | GAGGAG | 1 cut(s) | 322 |
| BseXI | GCAGC | 3 cut(s) | 340, 343, 426 |
| BshFI | GGCC | 3 cut(s) | 329, 401, 547 |
| BshNI | GGYRCC | 1 cut(s) | 406 |
| BsiHKAI | GWGCWC | 1 cut(s) | 107 |
| BsmAI | GTCTC | 1 cut(s) | 192 |
| BsmBI | CGTCTC | 1 cut(s) | 192 |
| BsnI | GGCC | 3 cut(s) | 329, 401, 547 |
| Bsp1286I | GDGCHC | 2 cut(s) | 107, 378 |
| BspACI | CCGC | 2 cut(s) | 153, 273 |
| BspANI | GGCC | 3 cut(s) | 329, 401, 547 |
| BspCNI | CTCAG | 1 cut(s) | 519 |
| BspLI | GGNNCC | 2 cut(s) | 408, 503 |
| BspT107I | GGYRCC | 1 cut(s) | 406 |
| BsrI | ACTGG | 1 cut(s) | 480 |
| BssECI | CCNNGG | 1 cut(s) | 402 |
| Bst4CI | ACNGT | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 1 cut(s) | 390 |
| BstC8I | GCNNGC | 1 cut(s) | 518 |
| BstDEI | CTNAG | 1 cut(s) | 527 |
| BstDSI | CCRYGG | 1 cut(s) | 402 |
| BstF5I | GGATG | 2 cut(s) | 237, 256 |
| BstMAI | GTCTC | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 448 |
| BstV1I | GCAGC | 3 cut(s) | 340, 343, 426 |
| BstV2I | GAAGAC | 1 cut(s) | 110 |
| BsuRI | GGCC | 3 cut(s) | 329, 401, 547 |
| BtgI | CCRYGG | 1 cut(s) | 402 |
| BtsCI | GGATG | 2 cut(s) | 237, 256 |
| BtsI | GCAGTG | 1 cut(s) | 376 |
| BtsIMutI | CAGTG | 1 cut(s) | 376 |
| Cac8I | GCNNGC | 1 cut(s) | 518 |
| Csp6I | GTAC | 1 cut(s) | 407 |
| CviAII | CATG | 2 cut(s) | 228, 238 |
| CviQI | GTAC | 1 cut(s) | 407 |
| DdeI | CTNAG | 1 cut(s) | 527 |
| Eam1104I | CTCTTC | 1 cut(s) | 390 |
| EarI | CTCTTC | 1 cut(s) | 390 |
| Eco147I | AGGCCT | 1 cut(s) | 329 |
| Eco24I | GRGCYC | 1 cut(s) | 378 |
| Eco57I | CTGAAG | 1 cut(s) | 297 |
| EcoT38I | GRGCYC | 1 cut(s) | 378 |
| Esp3I | CGTCTC | 1 cut(s) | 192 |
| FaeI | CATG | 2 cut(s) | 231, 241 |
| FaiI | YATR | 5 cut(s) | 72, 229, 239, 288, 290 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 295, 327 |
| FatI | CATG | 2 cut(s) | 227, 237 |
| FauNDI | CATATG | 1 cut(s) | 288 |
| FblI | GTMKAC | 1 cut(s) | 414 |
| Fnu4HI | GCNGC | 3 cut(s) | 354, 357, 440 |
| FokI | GGATG | 2 cut(s) | 243, 244 |
| FriOI | GRGCYC | 1 cut(s) | 378 |
| Fsp4HI | GCNGC | 3 cut(s) | 354, 357, 440 |
| FspBI | CTAG | 1 cut(s) | 452 |
| GluI | GCNGC | 3 cut(s) | 354, 357, 440 |
| HaeIII | GGCC | 3 cut(s) | 329, 401, 547 |
| Hin1II | CATG | 2 cut(s) | 231, 241 |
| HincII | GTYRAC | 1 cut(s) | 415 |
| HindII | GTYRAC | 1 cut(s) | 415 |
| HindIII | AAGCTT | 1 cut(s) | 419 |
| HinfI | GANTC | 1 cut(s) | 431 |
| HphI | GGTGA | 2 cut(s) | 139, 192 |
| Hpy166II | GTNNAC | 2 cut(s) | 8, 415 |
| Hpy188I | TCNGA | 3 cut(s) | 261, 337, 581 |
| Hpy188III | TCNNGA | 3 cut(s) | 26, 92, 383 |
| Hpy8I | GTNNAC | 2 cut(s) | 8, 415 |
| HpyAV | CCTTC | 3 cut(s) | 174, 213, 389 |
| HpyCH4III | ACNGT | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 7 cut(s) | 58, 218, 235, 256, 359, 442, 472 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 448 |
| HpyF3I | CTNAG | 1 cut(s) | 527 |
| Hsp92II | CATG | 2 cut(s) | 231, 241 |
| KpnI | GGTACC | 1 cut(s) | 410 |
| LpnPI | CCDG | 4 cut(s) | 396, 423, 461, 484 |
| Lsp1109I | GCAGC | 3 cut(s) | 340, 343, 426 |
| LweI | GCATC | 3 cut(s) | 222, 265, 459 |
| MaeI | CTAG | 1 cut(s) | 452 |
| MhlI | GDGCHC | 2 cut(s) | 107, 378 |
| MluCI | AATT | 1 cut(s) | 83 |
| MlyI | GAGTC | 1 cut(s) | 440 |
| MmeI | TCCRAC | 1 cut(s) | 215 |
| MnlI | CCTC | 9 cut(s) | 88, 147, 153, 340, 343, 358, 391, 441, 558 |
| MroXI | GAANNNNTTC | 1 cut(s) | 266 |
| MseI | TTAA | 2 cut(s) | 324, 569 |
| MslI | CAYNNNNRTG | 1 cut(s) | 110 |
| MspA1I | CMGCKG | 1 cut(s) | 273 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 448 |
| NdeI | CATATG | 1 cut(s) | 288 |
| NlaIII | CATG | 2 cut(s) | 231, 241 |
| NlaIV | GGNNCC | 2 cut(s) | 408, 503 |
| PceI | AGGCCT | 1 cut(s) | 329 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 502 |
| PdmI | GAANNNNTTC | 1 cut(s) | 266 |
| PkrI | GCNGC | 3 cut(s) | 355, 358, 441 |
| PleI | GAGTC | 1 cut(s) | 439 |
| PpsI | GAGTC | 1 cut(s) | 439 |
| PspN4I | GGNNCC | 2 cut(s) | 408, 503 |
| RsaI | GTAC | 1 cut(s) | 408 |
| RsaNI | GTAC | 1 cut(s) | 407 |
| RseI | CAYNNNNRTG | 1 cut(s) | 110 |
| SalI | GTCGAC | 1 cut(s) | 413 |
| SaqAI | TTAA | 2 cut(s) | 324, 569 |
| SatI | GCNGC | 3 cut(s) | 354, 357, 440 |
| SchI | GAGTC | 1 cut(s) | 440 |
| SduI | GDGCHC | 2 cut(s) | 107, 378 |
| SetI | ASST | 6 cut(s) | 205, 308, 313, 412, 423, 441 |
| SfaNI | GCATC | 3 cut(s) | 222, 265, 459 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 110 |
| SmlI | CTYRAG | 1 cut(s) | 92 |
| SmoI | CTYRAG | 1 cut(s) | 92 |
| Sse9I | AATT | 1 cut(s) | 83 |
| SseBI | AGGCCT | 1 cut(s) | 329 |
| SsiI | CCGC | 2 cut(s) | 153, 273 |
| SspMI | CTAG | 1 cut(s) | 452 |
| StuI | AGGCCT | 1 cut(s) | 329 |
| TaaI | ACNGT | 1 cut(s) | 23 |
| TaqI | TCGA | 2 cut(s) | 280, 414 |
| TasI | AATT | 1 cut(s) | 83 |
| Tru1I | TTAA | 2 cut(s) | 324, 569 |
| Tru9I | TTAA | 2 cut(s) | 324, 569 |
| TscAI | CASTG | 1 cut(s) | 376 |
| TseI | GCWGC | 3 cut(s) | 353, 356, 439 |
| TspDTI | ATGAA | 7 cut(s) | 27, 186, 195, 216, 254, 275, 575 |
| TspRI | CASTG | 1 cut(s) | 376 |
| XapI | RAATTY | 1 cut(s) | 83 |
| XmiI | GTMKAC | 1 cut(s) | 414 |
| XmnI | GAANNNNTTC | 1 cut(s) | 266 |
| XspI | CTAG | 1 cut(s) | 452 |