exoribonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g03700 |
| malus_domestica | MD02G1278000.v1.1 MD07G1045900.v1.1 |
| prunus_persica | Prupe.2G042700_v2.0.a1 Prupe.2G042700_v2.0.a1 Prupe.2G042700_v2.0.a1 |
| pyrus_communis | pycom02g23800 pycom07g03310 |
| rosa_chinensis | RchiOBHm_Chr1g0326491 |
| rosa_laevigata | RLG00000030069 |
| rosa_rugosa | Rorug01G0061000 |
| rosa_samantha | Rh1AG076600 Rh1BG062500 Rh1CG075300 Rh1DG082000 |
| rosa_wichuraiana | Rw1G006120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 149, 554 |
| AclWI | GGATC | 1 cut(s) | 699 |
| AcsI | RAATTY | 2 cut(s) | 293, 711 |
| AfaI | GTAC | 2 cut(s) | 182, 395 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 169, 212, 311 |
| AgsI | TTSAA | 3 cut(s) | 212, 302, 466 |
| AhlI | ACTAGT | 1 cut(s) | 239 |
| AluBI | AGCT | 1 cut(s) | 226 |
| AluI | AGCT | 1 cut(s) | 226 |
| Alw26I | GTCTC | 2 cut(s) | 103, 646 |
| AlwI | GGATC | 1 cut(s) | 699 |
| AoxI | GGCC | 1 cut(s) | 619 |
| ApeKI | GCWGC | 1 cut(s) | 288 |
| ApoI | RAATTY | 2 cut(s) | 293, 711 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 216 |
| AspS9I | GGNCC | 1 cut(s) | 138 |
| AvaII | GGWCC | 1 cut(s) | 138 |
| BbvI | GCAGC | 1 cut(s) | 300 |
| BccI | CCATC | 3 cut(s) | 345, 576, 601 |
| BciVI | GTATCC | 1 cut(s) | 344 |
| BcoDI | GTCTC | 2 cut(s) | 103, 646 |
| BcuI | ACTAGT | 1 cut(s) | 239 |
| BfaI | CTAG | 1 cut(s) | 240 |
| BfuAI | ACCTGC | 2 cut(s) | 149, 554 |
| BfuI | GTATCC | 1 cut(s) | 344 |
| BisI | GCNGC | 1 cut(s) | 289 |
| BlsI | GCNGC | 1 cut(s) | 290 |
| Bme18I | GGWCC | 1 cut(s) | 138 |
| BmgT120I | GGNCC | 1 cut(s) | 138 |
| BpuEI | CTTGAG | 3 cut(s) | 173, 558, 694 |
| Bsa29I | ATCGAT | 1 cut(s) | 445 |
| BsaBI | GATNNNNATC | 1 cut(s) | 561 |
| BsaI | GGTCTC | 1 cut(s) | 646 |
| BsaJI | CCNNGG | 1 cut(s) | 435 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 169, 212, 311 |
| Bse1I | ACTGG | 7 cut(s) | 67, 251, 316, 359, 418, 499, 630 |
| Bse8I | GATNNNNATC | 1 cut(s) | 561 |
| BseCI | ATCGAT | 1 cut(s) | 445 |
| BseDI | CCNNGG | 1 cut(s) | 435 |
| BseGI | GGATG | 4 cut(s) | 247, 265, 320, 568 |
| BseJI | GATNNNNATC | 1 cut(s) | 561 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 169, 212, 311 |
| BseNI | ACTGG | 7 cut(s) | 67, 251, 316, 359, 418, 499, 630 |
| BseXI | GCAGC | 1 cut(s) | 300 |
| BshFI | GGCC | 1 cut(s) | 621 |
| BshVI | ATCGAT | 1 cut(s) | 445 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 169, 212, 311 |
| BsmAI | GTCTC | 2 cut(s) | 103, 646 |
| BsmBI | CGTCTC | 1 cut(s) | 103 |
| BsmI | GAATGC | 1 cut(s) | 409 |
| BsnI | GGCC | 1 cut(s) | 621 |
| Bso31I | GGTCTC | 1 cut(s) | 646 |
| Bsp143I | GATC | 2 cut(s) | 48, 691 |
| Bsp19I | CCATGG | 1 cut(s) | 435 |
| BspANI | GGCC | 1 cut(s) | 621 |
| BspDI | ATCGAT | 1 cut(s) | 445 |
| BspHI | TCATGA | 1 cut(s) | 340 |
| BspMI | ACCTGC | 2 cut(s) | 149, 554 |
| BspPI | GGATC | 1 cut(s) | 699 |
| BspTNI | GGTCTC | 1 cut(s) | 646 |
| BsrI | ACTGG | 7 cut(s) | 67, 251, 316, 359, 418, 499, 630 |
| BssECI | CCNNGG | 1 cut(s) | 435 |
| BssMI | GATC | 2 cut(s) | 48, 691 |
| BssT1I | CCWWGG | 1 cut(s) | 435 |
| Bst4CI | ACNGT | 2 cut(s) | 278, 393 |
| BstDSI | CCRYGG | 1 cut(s) | 435 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 167 |
| BstF5I | GGATG | 4 cut(s) | 247, 265, 320, 568 |
| BstKTI | GATC | 2 cut(s) | 51, 694 |
| BstMAI | GTCTC | 2 cut(s) | 103, 646 |
| BstMBI | GATC | 2 cut(s) | 48, 691 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 618 |
| BstNSI | RCATGY | 2 cut(s) | 636, 663 |
| BstV1I | GCAGC | 1 cut(s) | 300 |
| BstX2I | RGATCY | 1 cut(s) | 691 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 82 |
| BstYI | RGATCY | 1 cut(s) | 691 |
| Bsu15I | ATCGAT | 1 cut(s) | 445 |
| BsuI | GTATCC | 1 cut(s) | 344 |
| BsuRI | GGCC | 1 cut(s) | 621 |
| BsuTUI | ATCGAT | 1 cut(s) | 445 |
| BtgI | CCRYGG | 1 cut(s) | 435 |
| BtsCI | GGATG | 4 cut(s) | 247, 265, 320, 568 |
| BtsIMutI | CAGTG | 1 cut(s) | 733 |
| BveI | ACCTGC | 2 cut(s) | 149, 554 |
| CciI | TCATGA | 1 cut(s) | 340 |
| Cfr13I | GGNCC | 1 cut(s) | 138 |
| ClaI | ATCGAT | 1 cut(s) | 445 |
| Csp6I | GTAC | 2 cut(s) | 181, 394 |
| CviAII | CATG | 6 cut(s) | 82, 341, 436, 613, 633, 660 |
| CviJI | RGCY | 6 cut(s) | 149, 226, 417, 542, 621, 719 |
| CviKI_1 | RGCY | 6 cut(s) | 149, 226, 417, 542, 621, 719 |
| CviQI | GTAC | 2 cut(s) | 181, 394 |
| DpnI | GATC | 2 cut(s) | 50, 693 |
| DpnII | GATC | 2 cut(s) | 48, 691 |
| DraI | TTTAAA | 1 cut(s) | 22 |
| Eco130I | CCWWGG | 1 cut(s) | 435 |
| Eco31I | GGTCTC | 1 cut(s) | 646 |
| Eco47I | GGWCC | 1 cut(s) | 138 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 167 |
| EcoO109I | RGGNCCY | 1 cut(s) | 138 |
| EcoT14I | CCWWGG | 1 cut(s) | 435 |
| ErhI | CCWWGG | 1 cut(s) | 435 |
| Esp3I | CGTCTC | 1 cut(s) | 103 |
| FaeI | CATG | 6 cut(s) | 85, 344, 439, 616, 636, 663 |
| FatI | CATG | 6 cut(s) | 81, 340, 435, 612, 632, 659 |
| Fnu4HI | GCNGC | 1 cut(s) | 289 |
| FokI | GGATG | 4 cut(s) | 234, 272, 327, 555 |
| Fsp4HI | GCNGC | 1 cut(s) | 289 |
| FspBI | CTAG | 1 cut(s) | 240 |
| GluI | GCNGC | 1 cut(s) | 289 |
| HaeIII | GGCC | 1 cut(s) | 621 |
| Hin1II | CATG | 6 cut(s) | 85, 344, 439, 616, 636, 663 |
| HincII | GTYRAC | 1 cut(s) | 360 |
| HindII | GTYRAC | 1 cut(s) | 360 |
| HinfI | GANTC | 5 cut(s) | 174, 202, 269, 374, 702 |
| Hpy166II | GTNNAC | 1 cut(s) | 360 |
| Hpy188I | TCNGA | 4 cut(s) | 274, 642, 696, 749 |
| Hpy188III | TCNNGA | 6 cut(s) | 221, 266, 299, 341, 575, 673 |
| Hpy8I | GTNNAC | 1 cut(s) | 360 |
| HpyAV | CCTTC | 1 cut(s) | 206 |
| HpyCH4III | ACNGT | 2 cut(s) | 278, 393 |
| HpyCH4V | TGCA | 4 cut(s) | 12, 122, 388, 663 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 618 |
| Hsp92II | CATG | 6 cut(s) | 85, 344, 439, 616, 636, 663 |
| Kzo9I | GATC | 2 cut(s) | 48, 691 |
| Lsp1109I | GCAGC | 1 cut(s) | 300 |
| MaeI | CTAG | 1 cut(s) | 240 |
| MaeIII | GTNAC | 3 cut(s) | 317, 482, 728 |
| MalI | GATC | 2 cut(s) | 50, 693 |
| MboI | GATC | 2 cut(s) | 48, 691 |
| MboII | GAAGA | 1 cut(s) | 137 |
| MflI | RGATCY | 1 cut(s) | 691 |
| MluCI | AATT | 3 cut(s) | 293, 711, 741 |
| MlyI | GAGTC | 1 cut(s) | 368 |
| MmeI | TCCRAC | 1 cut(s) | 332 |
| MnlI | CCTC | 6 cut(s) | 139, 173, 197, 315, 532, 582 |
| MroXI | GAANNNNTTC | 1 cut(s) | 216 |
| MseI | TTAA | 2 cut(s) | 21, 228 |
| MslI | CAYNNNNRTG | 1 cut(s) | 80 |
| Mva1269I | GAATGC | 1 cut(s) | 409 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 618 |
| NcoI | CCATGG | 1 cut(s) | 435 |
| NdeII | GATC | 2 cut(s) | 48, 691 |
| NlaIII | CATG | 6 cut(s) | 85, 344, 439, 616, 636, 663 |
| NmuCI | GTSAC | 1 cut(s) | 728 |
| NspI | RCATGY | 2 cut(s) | 636, 663 |
| PagI | TCATGA | 1 cut(s) | 340 |
| PctI | GAATGC | 1 cut(s) | 409 |
| PdmI | GAANNNNTTC | 1 cut(s) | 216 |
| PfeI | GAWTC | 4 cut(s) | 174, 202, 269, 702 |
| PkrI | GCNGC | 1 cut(s) | 290 |
| PleI | GAGTC | 1 cut(s) | 368 |
| PpsI | GAGTC | 1 cut(s) | 368 |
| PpuMI | RGGWCCY | 1 cut(s) | 138 |
| Psp5II | RGGWCCY | 1 cut(s) | 138 |
| PspPI | GGNCC | 1 cut(s) | 138 |
| PspPPI | RGGWCCY | 1 cut(s) | 138 |
| PsuI | RGATCY | 1 cut(s) | 691 |
| RsaI | GTAC | 2 cut(s) | 182, 395 |
| RsaNI | GTAC | 2 cut(s) | 181, 394 |
| RseI | CAYNNNNRTG | 1 cut(s) | 80 |
| SaqAI | TTAA | 2 cut(s) | 21, 228 |
| SatI | GCNGC | 1 cut(s) | 289 |
| Sau3AI | GATC | 2 cut(s) | 48, 691 |
| Sau96I | GGNCC | 1 cut(s) | 138 |
| SchI | GAGTC | 1 cut(s) | 368 |
| SetI | ASST | 8 cut(s) | 143, 189, 228, 307, 331, 335, 387, 548 |
| SinI | GGWCC | 1 cut(s) | 138 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 80 |
| SmlI | CTYRAG | 3 cut(s) | 188, 573, 673 |
| SmoI | CTYRAG | 3 cut(s) | 188, 573, 673 |
| SpeI | ACTAGT | 1 cut(s) | 239 |
| Sse9I | AATT | 3 cut(s) | 293, 711, 741 |
| SspMI | CTAG | 1 cut(s) | 240 |
| StyI | CCWWGG | 1 cut(s) | 435 |
| TaaI | ACNGT | 2 cut(s) | 278, 393 |
| TaqI | TCGA | 2 cut(s) | 445, 585 |
| TasI | AATT | 3 cut(s) | 293, 711, 741 |
| TfiI | GAWTC | 4 cut(s) | 174, 202, 269, 702 |
| Tru1I | TTAA | 2 cut(s) | 21, 228 |
| Tru9I | TTAA | 2 cut(s) | 21, 228 |
| TscAI | CASTG | 1 cut(s) | 733 |
| TseFI | GTSAC | 1 cut(s) | 728 |
| TseI | GCWGC | 1 cut(s) | 288 |
| Tsp45I | GTSAC | 1 cut(s) | 728 |
| TspDTI | ATGAA | 3 cut(s) | 249, 416, 440 |
| TspGWI | ACGGA | 1 cut(s) | 356 |
| TspRI | CASTG | 1 cut(s) | 733 |
| VpaK11BI | GGWCC | 1 cut(s) | 138 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 167 |
| XapI | RAATTY | 2 cut(s) | 293, 711 |
| XceI | RCATGY | 2 cut(s) | 636, 663 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 344 |
| XmnI | GAANNNNTTC | 1 cut(s) | 216 |
| XspI | CTAG | 1 cut(s) | 240 |