Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004806

Physical Location & Seq

Genomic Coordinates Forward (+)

10024169 .. 10030223

Gene Structure 6055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0061000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGATGCATTGGATTTGAAGAAGGTGGGGAGTGGAAGGTCTCAGGGGTCAGGGCACAGCCGTGGAAGTTCCGCAGGAGGAGGAAGGTTTGAGTATTTTGGGTGGGTGTATCATTTGGGGGTGAATAAGATAGGGCGTGAGTACTGTCACCTTCGTTTTCTCTTCATTCGGGGAAAGTATGTTGAGATGTACAAGCGTGATCCTCATGAGAACCCCGGAATTAAACCCATTCGGAAAGGTGTTGTTGGGCCTACATTGATGATAGAGGAGCTTGGGCGTCGAAAGGTCAACCATGGAGGTGGGGGTGGGGATATTTATGTTCTACGGTTTTACAATCGGTTGGATGAAACAAAGAAGGGAGAGATTGCTTGTGCTACAGCTGGAGAAGCTCAGAAGTGGATGGAGGCATTTGATCAAGCCAAGCAACAGGCAGAGTTTGAGCTTTCGAGAGGAGGTAGTGCCAGAAGCAAACTGAACTCAGAGGATGAGATTGATCTTGATGGACATCGGCCTAGAGTAAGGCACTATGCACACGGATTGAAAAAGCTTATAAAGATTGGGCAAGGGCCGGAGACGCTTTTGCGCCAATCGTCAAACTTGGCTGCAGATGTTGGCACAGATGAGTACTTTGAAAAGGATGTTGGAGATGCAGTTGAGGCGTATGAGTGGAAATGTGTGCGAACAGTTAACGGTGTTAGAATATTTCAAGATGTTGCTAACTCTGACAGGGGTAAAGGTGTTATCGTCAAGGCTGTTGGAGTTATTGATGCAAGTGCAGATACTGCTTTCGAAGTTCTTTTGAACCTTGAGCGACATCAGAGATATGAGTGGGATATGCTGACAGGTGATTTGGAGATGGTAGATTCTTATGATGGACACTATGATGTTGTCTATGGGACGTACAGTCCTATGTATCTTTCTAGGTGGGACTCCAAGAGAGATTTTATCTTTTCTAGGCAATGGTTCCGTGGACAAGATGGAACATACACAATCTTGCAATCCCCAGCTGTTCATAAGAAGAAGCCTCAGAGTTCTGGATATCGTCGTACAAAACTAAATCCATCTACTTGGGAGATTAGAAATTTTAACACATCCATGGATACTAATACTCCAAGATGTCTTGTCACACAGATGGTGGAGATACGTTCTGTTGGCTGGTGGAAGTGGAAGAAAAATCACTTCTCAAAGTTTGAAAAAAGTGTCCCTTATGCATTGTTGTGTCAAGTGGCAGGTCTCAAGGAATATATTACAGCAAATCCTGCACTCAAATTTAAATCTGCTGCTTCAGTTATCCAATCAAAGGTATCTTCTGTTTCCAGTGGTGAATCTGAGGCAGACGCAGCTCATGATGAGTTTTACGATGCAATGTCTGCAGACTCTTCTTCTTCTGATGAAGATAGTGACACTGAATTTGAAAATAAAGATGCAAAAGTGAAACTGAAGAATGTGGCATGGGCCATCACAAGCTTAGCTTTGAAACGAACTTTATCAGATGCTAATAAGGAACTTGATCCTAAAGCTGCTCCTTTCATGATTGATCCAAGCCAGTTCCATGGTTCCTTGCGCAAAGCAAGGGATGAGGCCGACACGGACTGCTGGACATCTCCAAGTGGTACCGGGTTCATGATTAGAGGAAAGACCTACCTAAAGGATAGTTCCAAGGTAACAGGAGGAGATCCTCTTCTCAAGCTCATAGCAGTAGATTGGTTCAAAGTTGATAAAAGCATAGATAGGATTGCCCTGCATCCCAAGTGTCTTATGCAGTCAGAAGCTGGAAAGAAGCTTCCATTTGTACTAGTTGTTAATCTCCAGGTTCCAGCAACACCAAACTATAGTCTGGTACTTTACTACGCTTCTGACAGACCTGTAAATCCTAATTCTTTGCTTGCTAAATTTGTGGATGGGAGCGATATGTTTCGTAATGCAAGATTTAAACTAATTCCAAGTATTGTGGATGGATATTGGATGGTCAAGCGTGCTGTTGGAAGCAAAGCTTGCCTACTGGGCAAAGCTGTATCTTGCAGGTATCTCAGGCAAGACAACTTTCTTGAGATTGATGTGGATATTGGATCATCATCCGTGGCGAGGAGTATCATCGGACTTGTCCTCGGATATGTCACCAGCATAGTAGTTGACCTTGCCATTTTGATAGAGGCGAGGGAGGAGGCAGACTTGCCTGAGTACATTCTTGGAACTGTTCGGCTTAATCGTTTGAAGATTGATTCGGCTGTTCATTTGGAGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

748

Amino Acids

83.68

Weight (kDa)

8.62

Isoelectric Point (pI)

37.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	244 - 359	6.9e-07	START domain
EDR2_C	PF07059	533 - 738	1.5e-76	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17525
fragaria_vesca	FvH4_7g03710 FvH4_7g03710 FvH4_7g03710
malus_domestica	MD05G1037900.v1.1 MD10G1041700.v1.1
prunus_persica	Prupe.2G066000_v2.0.a1
pyrus_communis	pycom05g02810 pycom10g02880
rosa_chinensis	RchiOBHm_Chr1g0326501 RchiOBHm_Chr1g0326531 RchiOBHm_Chr1g0326571 RchiOBHm_Chr1g0326581
rosa_laevigata	RLG00000005572 RLG00000006170 RLG00000023929 RLG00000030068
rosa_multiflora	Rmu_sc0001355.1_g000018
rosa_roxburghii	Rroxscaffold_2G00146300 Rroxscaffold_4G00323710 Rroxscaffold_4G00327680
rosa_rugosa	Rorug01G0061000
rosa_samantha	Rh1BG062600 Rh1BG062800 Rh1CG075400 Rh1DG082100 Rh1DG082200 Rh1DG082400 Rh7BG001800 Rh7DG001700
rosa_wichuraiana	Rw1G006130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	551
Acc16I	TGCGCA	1 cut(s)	1565
Acc36I	ACCTGC	2 cut(s)	1220, 2013
Acc65I	GGTACC	1 cut(s)	1613
AccB1I	GGYRCC	1 cut(s)	1613
AciI	CCGC	1 cut(s)	72
AclWI	GGATC	5 cut(s)	194, 1505, 1532, 1670, 2077
AcsI	RAATTY	4 cut(s)	1081, 1268, 1409, 1892
AcuI	CTGAAG	2 cut(s)	1269, 1460
AcyI	GRCGYC	1 cut(s)	277
AfaI	GTAC	9 cut(s)	143, 191, 626, 902, 1048, 1615, 1794, 1842, 2183
AfiI	CCNNNNNNNGG	2 cut(s)	1300, 2085
AhdI	GACNNNNNGTC	1 cut(s)	903
AhlI	ACTAGT	1 cut(s)	1795
AjnI	CCWGG	1 cut(s)	1809
AjuI	GAANNNNNNNTTGG	2 cut(s)	624, 656
AleI	CACNNNNGTG	1 cut(s)	60
Alw26I	GTCTC	3 cut(s)	45, 566, 1238
AlwI	GGATC	5 cut(s)	194, 1505, 1532, 1670, 2077
AlwNI	CAGNNNCTG	2 cut(s)	782, 1772
AoxI	GGCC	5 cut(s)	248, 509, 566, 1455, 1581
ApeKI	GCWGC	4 cut(s)	602, 1280, 1340, 1520
ApoI	RAATTY	4 cut(s)	1081, 1268, 1409, 1892
ArsI	GACNNNNNNTTYG	4 cut(s)	832, 864, 1394, 1426
Asp718I	GGTACC	1 cut(s)	1613
AspLEI	GCGC	2 cut(s)	585, 1566
AspS9I	GGNCC	3 cut(s)	248, 566, 1455
AsuC2I	CCSGG	2 cut(s)	216, 1618
AsuHPI	GGTGA	5 cut(s)	133, 140, 857, 1334, 2110
AsuII	TTCGAA	1 cut(s)	789
BaeGI	GKGCMC	1 cut(s)	57
BanI	GGYRCC	1 cut(s)	1613
BbvI	GCAGC	4 cut(s)	589, 1267, 1352, 1507
BceAI	ACGGC	1 cut(s)	45
BciT130I	CCWGG	1 cut(s)	1811
BciVI	GTATCC	1 cut(s)	1093
BclI	TGATCA	1 cut(s)	412
BcnI	CCSGG	2 cut(s)	216, 1618
BcoDI	GTCTC	3 cut(s)	45, 566, 1238
BcuI	ACTAGT	1 cut(s)	1795
BfaI	CTAG	4 cut(s)	513, 921, 954, 1796
BfmI	CTRYAG	4 cut(s)	375, 603, 1371, 1831
BfuAI	ACCTGC	2 cut(s)	1220, 2013
BfuI	GTATCC	1 cut(s)	1093
BglI	GCCNNNNNGGC	1 cut(s)	2004
BisI	GCNGC	4 cut(s)	603, 1281, 1341, 1521
BlpI	GCTNAGC	1 cut(s)	1468
BlsI	GCNGC	4 cut(s)	604, 1282, 1342, 1522
BmcAI	AGTACT	2 cut(s)	143, 626
Bme1390I	CCNGG	3 cut(s)	216, 1618, 1811
BmeRI	GACNNNNNGTC	1 cut(s)	903
BmgT120I	GGNCC	3 cut(s)	248, 566, 1455
BmiI	GGNNCC	4 cut(s)	965, 1558, 1615, 1815
BmrFI	CCNGG	3 cut(s)	216, 1618, 1811
BmrI	ACTGGG	1 cut(s)	2012
BmsI	GCATC	6 cut(s)	637, 757, 1351, 1414, 1483, 1753
BmuI	ACTGGG	1 cut(s)	2012
BpmI	CTGGAG	2 cut(s)	402, 1793
Bpu1102I	GCTNAGC	1 cut(s)	1468
Bpu14I	TTCGAA	1 cut(s)	789
BpuEI	CTTGAG	4 cut(s)	827, 1220, 1670, 2069
BpuMI	CCSGG	2 cut(s)	216, 1618
BsaBI	GATNNNNATC	2 cut(s)	504, 2074
BsaHI	GRCGYC	1 cut(s)	277
BsaI	GGTCTC	2 cut(s)	45, 1238
BsaJI	CCNNGG	9 cut(s)	61, 214, 292, 967, 1095, 1552, 1659, 2079, 2107
BsaXI	ACNNNNNCTCC	4 cut(s)	636, 666, 1093, 1123
Bsc4I	CCNNNNNNNGG	2 cut(s)	1300, 2085
Bse1I	ACTGG	3 cut(s)	1317, 1546, 2007
Bse3DI	GCAATG	2 cut(s)	965, 1371
Bse8I	GATNNNNATC	2 cut(s)	504, 2074
BseBI	CCWGG	1 cut(s)	1811
BseDI	CCNNGG	9 cut(s)	61, 214, 292, 967, 1095, 1552, 1659, 2079, 2107
BseJI	GATNNNNATC	2 cut(s)	504, 2074
BseLI	CCNNNNNNNGG	2 cut(s)	1300, 2085
BseMI	GCAATG	2 cut(s)	965, 1371
BseMII	CTCAG	7 cut(s)	56, 404, 492, 1040, 1320, 2044, 2169
BseNI	ACTGG	3 cut(s)	1317, 1546, 2007
BseRI	GAGGAG	6 cut(s)	93, 281, 465, 1686, 2101, 2177
BseSI	GKGCMC	1 cut(s)	57
BseXI	GCAGC	4 cut(s)	589, 1267, 1352, 1507
BseYI	CCCAGC	1 cut(s)	1003
BsgI	GTGCAG	2 cut(s)	795, 1245
BshFI	GGCC	5 cut(s)	250, 511, 568, 1457, 1583
BshNI	GGYRCC	1 cut(s)	1613
BsiSI	CCGG	3 cut(s)	216, 569, 1617
BslFI	GGGAC	3 cut(s)	910, 941, 1187
BslI	CCNNNNNNNGG	2 cut(s)	1300, 2085
BsmAI	GTCTC	3 cut(s)	45, 566, 1238
BsmBI	CGTCTC	1 cut(s)	566
BsmFI	GGGAC	3 cut(s)	910, 941, 1187
BsnI	GGCC	5 cut(s)	250, 511, 568, 1457, 1583
Bso31I	GGTCTC	2 cut(s)	45, 1238
Bsp119I	TTCGAA	1 cut(s)	789
Bsp1286I	GDGCHC	1 cut(s)	57
Bsp1407I	TGTACA	1 cut(s)	189
Bsp143I	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
Bsp1720I	GCTNAGC	1 cut(s)	1468
Bsp19I	CCATGG	3 cut(s)	292, 1095, 1552
BspACI	CCGC	1 cut(s)	72
BspANI	GGCC	5 cut(s)	250, 511, 568, 1457, 1583
BspCNI	CTCAG	7 cut(s)	55, 403, 491, 1039, 1321, 2043, 2170
BspHI	TCATGA	4 cut(s)	205, 1345, 1530, 1623
BspLI	GGNNCC	4 cut(s)	965, 1558, 1615, 1815
BspMAI	CTGCAG	2 cut(s)	607, 1375
BspMI	ACCTGC	2 cut(s)	1220, 2013
BspPI	GGATC	5 cut(s)	194, 1505, 1532, 1670, 2077
BspT104I	TTCGAA	1 cut(s)	789
BspT107I	GGYRCC	1 cut(s)	1613
BspTNI	GGTCTC	2 cut(s)	45, 1238
BsrDI	GCAATG	2 cut(s)	965, 1371
BsrGI	TGTACA	1 cut(s)	189
BsrI	ACTGG	3 cut(s)	1317, 1546, 2007
BssECI	CCNNGG	9 cut(s)	61, 214, 292, 967, 1095, 1552, 1659, 2079, 2107
BssMI	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
BssNI	GRCGYC	1 cut(s)	277
BssT1I	CCWWGG	4 cut(s)	292, 1095, 1552, 1659
Bst2UI	CCWGG	1 cut(s)	1811
Bst4CI	ACNGT	6 cut(s)	146, 327, 685, 692, 905, 2197
Bst6I	CTCTTC	3 cut(s)	167, 1384, 1686
BstACI	GRCGYC	1 cut(s)	277
BstAPI	GCANNNNNTGC	4 cut(s)	782, 1259, 1370, 1995
BstAUI	TGTACA	1 cut(s)	189
BstBI	TTCGAA	1 cut(s)	789
BstC8I	GCNNGC	3 cut(s)	1887, 1977, 1996
BstDEI	CTNAG	8 cut(s)	42, 390, 478, 1026, 1329, 1468, 2030, 2178
BstDSI	CCRYGG	6 cut(s)	61, 292, 967, 1095, 1552, 2079
BstHHI	GCGC	2 cut(s)	585, 1566
BstKTI	GATC	7 cut(s)	202, 415, 496, 1513, 1540, 1678, 2072
BstMAI	GTCTC	3 cut(s)	45, 566, 1238
BstMBI	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
BstMWI	GCNNNNNNNGC	9 cut(s)	386, 574, 656, 782, 1259, 1340, 1370, 1995, 2004
BstNI	CCWGG	1 cut(s)	1811
BstSCI	CCNGG	3 cut(s)	214, 1616, 1809
BstSFI	CTRYAG	4 cut(s)	375, 603, 1371, 1831
BstSLI	GKGCMC	1 cut(s)	57
BstV1I	GCAGC	4 cut(s)	589, 1267, 1352, 1507
BstX2I	RGATCY	1 cut(s)	1675
BstXI	CCANNNNNNTGG	3 cut(s)	299, 1068, 1553
BstYI	RGATCY	1 cut(s)	1675
BsuI	GTATCC	1 cut(s)	1093
BsuRI	GGCC	5 cut(s)	250, 511, 568, 1457, 1583
BtgI	CCRYGG	6 cut(s)	61, 292, 967, 1095, 1552, 2079
BtsIMutI	CAGTG	2 cut(s)	1324, 1404
BveI	ACCTGC	2 cut(s)	1220, 2013
Cac8I	GCNNGC	3 cut(s)	1887, 1977, 1996
CaiI	CAGNNNCTG	2 cut(s)	782, 1772
CciI	TCATGA	4 cut(s)	205, 1345, 1530, 1623
CfoI	GCGC	2 cut(s)	585, 1566
Cfr13I	GGNCC	3 cut(s)	248, 566, 1455
CseI	GACGC	3 cut(s)	266, 583, 1346
Csp6I	GTAC	9 cut(s)	142, 190, 625, 901, 1047, 1614, 1793, 1841, 2182
CspCI	CAANNNNNGTGG	2 cut(s)	1932, 1967
CviAII	CATG	9 cut(s)	206, 293, 1096, 1346, 1452, 1531, 1553, 1624, 2244
CviQI	GTAC	9 cut(s)	142, 190, 625, 901, 1047, 1614, 1793, 1841, 2182
DdeI	CTNAG	8 cut(s)	42, 390, 478, 1026, 1329, 1468, 2030, 2178
DpnI	GATC	7 cut(s)	201, 414, 495, 1512, 1539, 1677, 2071
DpnII	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
DraI	TTTAAA	2 cut(s)	1273, 1933
DriI	GACNNNNNGTC	1 cut(s)	903
Eam1104I	CTCTTC	3 cut(s)	167, 1384, 1686
Eam1105I	GACNNNNNGTC	1 cut(s)	903
EarI	CTCTTC	3 cut(s)	167, 1384, 1686
Eco130I	CCWWGG	4 cut(s)	292, 1095, 1552, 1659
Eco31I	GGTCTC	2 cut(s)	45, 1238
Eco32I	GATATC	1 cut(s)	1040
Eco57I	CTGAAG	2 cut(s)	1269, 1460
EcoRII	CCWGG	1 cut(s)	1809
EcoRV	GATATC	1 cut(s)	1040
EcoT14I	CCWWGG	4 cut(s)	292, 1095, 1552, 1659
EcoT22I	ATGCAT	2 cut(s)	10, 1213
ErhI	CCWWGG	4 cut(s)	292, 1095, 1552, 1659
Esp3I	CGTCTC	1 cut(s)	566
FaeI	CATG	9 cut(s)	209, 296, 1099, 1349, 1455, 1534, 1556, 1627, 2247
FalI	AAGNNNNNCTT	6 cut(s)	1189, 1221, 1456, 1488, 1978, 2010
FaqI	GGGAC	3 cut(s)	910, 941, 1187
FatI	CATG	9 cut(s)	205, 292, 1095, 1345, 1451, 1530, 1552, 1623, 2243
FbaI	TGATCA	1 cut(s)	412
Fnu4HI	GCNGC	4 cut(s)	603, 1281, 1341, 1521
Fsp4HI	GCNGC	4 cut(s)	603, 1281, 1341, 1521
FspBI	CTAG	4 cut(s)	513, 921, 954, 1796
FspI	TGCGCA	1 cut(s)	1565
GlaI	GCGC	2 cut(s)	584, 1565
GluI	GCNGC	4 cut(s)	603, 1281, 1341, 1521
GsaI	CCCAGC	1 cut(s)	1007
GsuI	CTGGAG	2 cut(s)	402, 1793
HaeIII	GGCC	5 cut(s)	250, 511, 568, 1457, 1583
HapII	CCGG	3 cut(s)	216, 569, 1617
HgaI	GACGC	3 cut(s)	266, 583, 1346
HhaI	GCGC	2 cut(s)	585, 1566
Hin1I	GRCGYC	1 cut(s)	277
Hin1II	CATG	9 cut(s)	209, 296, 1099, 1349, 1455, 1534, 1556, 1627, 2247
Hin6I	GCGC	2 cut(s)	583, 1564
HinP1I	GCGC	2 cut(s)	583, 1564
HincII	GTYRAC	3 cut(s)	289, 688, 2134
HindII	GTYRAC	3 cut(s)	289, 688, 2134
HindIII	AAGCTT	4 cut(s)	545, 1465, 1781, 1992
HinfI	GANTC	5 cut(s)	863, 929, 1325, 1376, 2222
HpaI	GTTAAC	1 cut(s)	688
HpaII	CCGG	3 cut(s)	216, 569, 1617
HphI	GGTGA	5 cut(s)	133, 140, 857, 1334, 2110
Hpy166II	GTNNAC	4 cut(s)	289, 688, 971, 2134
Hpy188III	TCNNGA	9 cut(s)	206, 447, 497, 707, 1035, 1346, 1531, 1624, 2048
Hpy8I	GTNNAC	4 cut(s)	289, 688, 971, 2134
Hpy99I	CGWCG	2 cut(s)	282, 1047
HpyAV	CCTTC	5 cut(s)	16, 30, 78, 161, 349
HpyCH4III	ACNGT	6 cut(s)	146, 327, 685, 692, 905, 2197
HpyCH4IV	ACGT	2 cut(s)	899, 1144
HpyF10VI	GCNNNNNNNGC	9 cut(s)	386, 574, 656, 782, 1259, 1340, 1370, 1995, 2004
HpyF3I	CTNAG	8 cut(s)	42, 390, 478, 1026, 1329, 1468, 2030, 2178
HpySE526I	ACGT	2 cut(s)	899, 1144
Hsp92I	GRCGYC	1 cut(s)	277
Hsp92II	CATG	9 cut(s)	209, 296, 1099, 1349, 1455, 1534, 1556, 1627, 2247
HspAI	GCGC	2 cut(s)	583, 1564
KpnI	GGTACC	1 cut(s)	1617
Ksp22I	TGATCA	1 cut(s)	412
KspAI	GTTAAC	1 cut(s)	688
Kzo9I	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
LmnI	GCTCC	3 cut(s)	268, 1528, 1905
Lsp1109I	GCAGC	4 cut(s)	589, 1267, 1352, 1507
LweI	GCATC	6 cut(s)	637, 757, 1351, 1414, 1483, 1753
MaeI	CTAG	4 cut(s)	513, 921, 954, 1796
MaeII	ACGT	2 cut(s)	899, 1144
MaeIII	GTNAC	5 cut(s)	146, 1123, 1400, 1663, 2116
MalI	GATC	7 cut(s)	201, 414, 495, 1512, 1539, 1677, 2071
MboI	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
MflI	RGATCY	1 cut(s)	1675
MhlI	GDGCHC	1 cut(s)	57
MluCI	AATT	7 cut(s)	219, 1081, 1268, 1409, 1876, 1892, 1938
MlyI	GAGTC	2 cut(s)	923, 1370
MmeI	TCCRAC	4 cut(s)	321, 622, 736, 1963
Mph1103I	ATGCAT	2 cut(s)	10, 1213
MseI	TTAA	7 cut(s)	222, 687, 1086, 1272, 1803, 1932, 2205
MslI	CAYNNNNRTG	6 cut(s)	60, 297, 882, 1094, 1130, 1216
MspA1I	CMGCKG	2 cut(s)	380, 1007
MspI	CCGG	3 cut(s)	216, 569, 1617
MspR9I	CCNGG	3 cut(s)	216, 1618, 1811
MvaI	CCWGG	1 cut(s)	1811
MwoI	GCNNNNNNNGC	9 cut(s)	386, 574, 656, 782, 1259, 1340, 1370, 1995, 2004
NciI	CCSGG	2 cut(s)	216, 1618
NcoI	CCATGG	3 cut(s)	292, 1095, 1552
NdeII	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
NlaIII	CATG	9 cut(s)	209, 296, 1099, 1349, 1455, 1534, 1556, 1627, 2247
NlaIV	GGNNCC	4 cut(s)	965, 1558, 1615, 1815
NmuCI	GTSAC	4 cut(s)	146, 1123, 1400, 2116
NsbI	TGCGCA	1 cut(s)	1565
NsiI	ATGCAT	2 cut(s)	10, 1213
NspV	TTCGAA	1 cut(s)	789
OliI	CACNNNNGTG	1 cut(s)	60
PagI	TCATGA	4 cut(s)	205, 1345, 1530, 1623
PcsI	WCGNNNNNNNCGW	1 cut(s)	2206
PfeI	GAWTC	3 cut(s)	863, 1325, 2222
PkrI	GCNGC	4 cut(s)	604, 1282, 1342, 1522
PleI	GAGTC	2 cut(s)	923, 1370
PpsI	GAGTC	2 cut(s)	923, 1370
PsiI	TTATAA	1 cut(s)	551
Psp6I	CCWGG	1 cut(s)	1809
PspFI	CCCAGC	1 cut(s)	1003
PspGI	CCWGG	1 cut(s)	1809
PspN4I	GGNNCC	4 cut(s)	965, 1558, 1615, 1815
PspPI	GGNCC	3 cut(s)	248, 566, 1455
PstI	CTGCAG	2 cut(s)	607, 1375
PstNI	CAGNNNCTG	2 cut(s)	782, 1772
PsuI	RGATCY	1 cut(s)	1675
PvuII	CAGCTG	2 cut(s)	380, 1007
RsaI	GTAC	9 cut(s)	143, 191, 626, 902, 1048, 1615, 1794, 1842, 2183
RsaNI	GTAC	9 cut(s)	142, 190, 625, 901, 1047, 1614, 1793, 1841, 2182
RseI	CAYNNNNRTG	6 cut(s)	60, 297, 882, 1094, 1130, 1216
SaqAI	TTAA	7 cut(s)	222, 687, 1086, 1272, 1803, 1932, 2205
SatI	GCNGC	4 cut(s)	603, 1281, 1341, 1521
Sau3AI	GATC	7 cut(s)	199, 412, 493, 1510, 1537, 1675, 2069
Sau96I	GGNCC	3 cut(s)	248, 566, 1455
ScaI	AGTACT	2 cut(s)	143, 626
SchI	GAGTC	2 cut(s)	923, 1370
ScrFI	CCNGG	3 cut(s)	216, 1618, 1811
SduI	GDGCHC	1 cut(s)	57
SfaNI	GCATC	6 cut(s)	637, 757, 1351, 1414, 1483, 1753
SfcI	CTRYAG	4 cut(s)	375, 603, 1371, 1831
SfuI	TTCGAA	1 cut(s)	789
SmiI	ATTTAAAT	1 cut(s)	1273
SmiMI	CAYNNNNRTG	6 cut(s)	60, 297, 882, 1094, 1130, 1216
SmlI	CTYRAG	4 cut(s)	806, 1235, 1685, 2048
SmoI	CTYRAG	4 cut(s)	806, 1235, 1685, 2048
SpeI	ACTAGT	1 cut(s)	1795
Sse9I	AATT	7 cut(s)	219, 1081, 1268, 1409, 1876, 1892, 1938
SsiI	CCGC	1 cut(s)	72
SspI	AATATT	1 cut(s)	702
SspMI	CTAG	4 cut(s)	513, 921, 954, 1796
StyD4I	CCNGG	3 cut(s)	214, 1616, 1809
StyI	CCWWGG	4 cut(s)	292, 1095, 1552, 1659
SwaI	ATTTAAAT	1 cut(s)	1273
TaaI	ACNGT	6 cut(s)	146, 327, 685, 692, 905, 2197
TaiI	ACGT	2 cut(s)	902, 1147
TaqI	TCGA	3 cut(s)	280, 446, 789
TasI	AATT	7 cut(s)	219, 1081, 1268, 1409, 1876, 1892, 1938
TatI	WGTACW	5 cut(s)	141, 189, 624, 1792, 2181
TfiI	GAWTC	3 cut(s)	863, 1325, 2222
Tru1I	TTAA	7 cut(s)	222, 687, 1086, 1272, 1803, 1932, 2205
Tru9I	TTAA	7 cut(s)	222, 687, 1086, 1272, 1803, 1932, 2205
TscAI	CASTG	2 cut(s)	1324, 1411
TseFI	GTSAC	4 cut(s)	146, 1123, 1400, 2116
TseI	GCWGC	4 cut(s)	602, 1280, 1340, 1520
Tsp45I	GTSAC	4 cut(s)	146, 1123, 1400, 2116
TspDTI	ATGAA	7 cut(s)	154, 360, 1001, 1407, 1519, 1612, 2222
TspGWI	ACGGA	4 cut(s)	549, 956, 1604, 2068
TspRI	CASTG	2 cut(s)	1324, 1411
XapI	RAATTY	4 cut(s)	1081, 1268, 1409, 1892
XspI	CTAG	4 cut(s)	513, 921, 954, 1796
ZrmI	AGTACT	2 cut(s)	143, 626
Zsp2I	ATGCAT	2 cut(s)	10, 1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.