Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17525 |
| fragaria_vesca | FvH4_7g03710 FvH4_7g03710 FvH4_7g03710 |
| malus_domestica | MD05G1037900.v1.1 MD10G1041700.v1.1 |
| prunus_persica | Prupe.2G066000_v2.0.a1 |
| pyrus_communis | pycom05g02810 pycom10g02880 |
| rosa_chinensis | RchiOBHm_Chr1g0326501 RchiOBHm_Chr1g0326531 RchiOBHm_Chr1g0326571 RchiOBHm_Chr1g0326581 |
| rosa_laevigata | RLG00000005572 RLG00000006170 RLG00000023929 RLG00000030068 |
| rosa_multiflora | Rmu_sc0001355.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00146300 Rroxscaffold_4G00323710 Rroxscaffold_4G00327680 |
| rosa_rugosa | Rorug01G0061000 |
| rosa_samantha | Rh1BG062600 Rh1BG062800 Rh1CG075400 Rh1DG082100 Rh1DG082200 Rh1DG082400 Rh7BG001800 Rh7DG001700 |
| rosa_wichuraiana | Rw1G006130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 385 |
| AcoI | YGGCCR | 1 cut(s) | 88 |
| AcyI | GRCGYC | 1 cut(s) | 252 |
| AdeI | CACNNNGTG | 1 cut(s) | 103 |
| AfaI | GTAC | 1 cut(s) | 143 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 196 |
| AgsI | TTSAA | 2 cut(s) | 172, 350 |
| AjnI | CCWGG | 1 cut(s) | 137 |
| AluBI | AGCT | 2 cut(s) | 215, 334 |
| AluI | AGCT | 2 cut(s) | 215, 334 |
| AoxI | GGCC | 2 cut(s) | 40, 88 |
| AsuHPI | GGTGA | 3 cut(s) | 115, 272, 332 |
| BbsI | GAAGAC | 1 cut(s) | 207 |
| BccI | CCATC | 2 cut(s) | 235, 317 |
| BceAI | ACGGC | 1 cut(s) | 75 |
| BciT130I | CCWGG | 1 cut(s) | 139 |
| BfaI | CTAG | 1 cut(s) | 50 |
| Bme1390I | CCNGG | 1 cut(s) | 139 |
| BmrFI | CCNGG | 1 cut(s) | 139 |
| BpiI | GAAGAC | 1 cut(s) | 207 |
| Bpu10I | CCTNAGC | 1 cut(s) | 216 |
| BpuEI | CTTGAG | 1 cut(s) | 146 |
| BsaHI | GRCGYC | 1 cut(s) | 252 |
| BsaWI | WCCGGW | 1 cut(s) | 278 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 196 |
| BseBI | CCWGG | 1 cut(s) | 139 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BshFI | GGCC | 2 cut(s) | 42, 90 |
| BsiSI | CCGG | 1 cut(s) | 279 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BsnI | GGCC | 2 cut(s) | 42, 90 |
| BspANI | GGCC | 2 cut(s) | 42, 90 |
| BssNI | GRCGYC | 1 cut(s) | 252 |
| Bst2UI | CCWGG | 1 cut(s) | 139 |
| Bst4CI | ACNGT | 1 cut(s) | 83 |
| BstACI | GRCGYC | 1 cut(s) | 252 |
| BstDEI | CTNAG | 1 cut(s) | 216 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 194 |
| BstNI | CCWGG | 1 cut(s) | 139 |
| BstSCI | CCNGG | 1 cut(s) | 137 |
| BstV2I | GAAGAC | 1 cut(s) | 207 |
| BsuRI | GGCC | 2 cut(s) | 42, 90 |
| CseI | GACGC | 1 cut(s) | 241 |
| Csp6I | GTAC | 1 cut(s) | 142 |
| CviJI | RGCY | 4 cut(s) | 42, 90, 215, 334 |
| CviKI_1 | RGCY | 4 cut(s) | 42, 90, 215, 334 |
| CviQI | GTAC | 1 cut(s) | 142 |
| DdeI | CTNAG | 1 cut(s) | 216 |
| DraIII | CACNNNGTG | 1 cut(s) | 103 |
| EaeI | YGGCCR | 1 cut(s) | 88 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 194 |
| EcoRII | CCWGG | 1 cut(s) | 137 |
| FaiI | YATR | 5 cut(s) | 14, 212, 228, 273, 385 |
| FspBI | CTAG | 1 cut(s) | 50 |
| HaeIII | GGCC | 2 cut(s) | 42, 90 |
| HapII | CCGG | 1 cut(s) | 279 |
| HgaI | GACGC | 1 cut(s) | 241 |
| Hin1I | GRCGYC | 1 cut(s) | 252 |
| HindIII | AAGCTT | 1 cut(s) | 332 |
| HinfI | GANTC | 1 cut(s) | 350 |
| HpaII | CCGG | 1 cut(s) | 279 |
| HphI | GGTGA | 3 cut(s) | 115, 272, 332 |
| Hpy188III | TCNNGA | 2 cut(s) | 163, 286 |
| Hpy99I | CGWCG | 1 cut(s) | 23 |
| HpyAV | CCTTC | 1 cut(s) | 165 |
| HpyCH4III | ACNGT | 1 cut(s) | 83 |
| HpyCH4V | TGCA | 1 cut(s) | 340 |
| HpyF3I | CTNAG | 1 cut(s) | 216 |
| Hsp92I | GRCGYC | 1 cut(s) | 252 |
| LpnPI | CCDG | 4 cut(s) | 124, 151, 292, 380 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MaeIII | GTNAC | 1 cut(s) | 92 |
| MboII | GAAGA | 4 cut(s) | 58, 212, 244, 247 |
| MfeI | CAATTG | 1 cut(s) | 36 |
| MluCI | AATT | 4 cut(s) | 36, 172, 315, 360 |
| MnlI | CCTC | 2 cut(s) | 39, 348 |
| MseI | TTAA | 2 cut(s) | 117, 330 |
| MspI | CCGG | 1 cut(s) | 279 |
| MspR9I | CCNGG | 1 cut(s) | 139 |
| MunI | CAATTG | 1 cut(s) | 36 |
| MvaI | CCWGG | 1 cut(s) | 139 |
| NmuCI | GTSAC | 1 cut(s) | 92 |
| PfeI | GAWTC | 1 cut(s) | 350 |
| PsiI | TTATAA | 1 cut(s) | 385 |
| Psp6I | CCWGG | 1 cut(s) | 137 |
| PspGI | CCWGG | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 143 |
| RsaNI | GTAC | 1 cut(s) | 142 |
| SaqAI | TTAA | 2 cut(s) | 117, 330 |
| ScrFI | CCNGG | 1 cut(s) | 139 |
| SetI | ASST | 6 cut(s) | 10, 123, 143, 157, 217, 336 |
| SmlI | CTYRAG | 1 cut(s) | 161 |
| SmoI | CTYRAG | 1 cut(s) | 161 |
| Sse9I | AATT | 4 cut(s) | 36, 172, 315, 360 |
| SspI | AATATT | 2 cut(s) | 269, 374 |
| SspMI | CTAG | 1 cut(s) | 50 |
| StyD4I | CCNGG | 1 cut(s) | 137 |
| TaaI | ACNGT | 1 cut(s) | 83 |
| TaqI | TCGA | 4 cut(s) | 18, 176, 313, 353 |
| TasI | AATT | 4 cut(s) | 36, 172, 315, 360 |
| TfiI | GAWTC | 1 cut(s) | 350 |
| Tru1I | TTAA | 2 cut(s) | 117, 330 |
| Tru9I | TTAA | 2 cut(s) | 117, 330 |
| TseFI | GTSAC | 1 cut(s) | 92 |
| Tsp45I | GTSAC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 3 cut(s) | 69, 279, 305 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 194 |
| XspI | CTAG | 1 cut(s) | 50 |