Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001355.1

Orthogroup ID

OG0004806

Physical Location & Seq

Genomic Coordinates Reverse (-)

79966 .. 84360

Gene Structure 4395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001355.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

atgttgaatgtacctgcgaggtctgtgtttgggtccgtcgtgagaaaggtgcctggtgtgttgacaccggcaattgttggcattgaagtttgctggttggccctgtctagtgcctcgttgcgctcggcctctgattgtggtcgcgattgcatgaggtcgcgtttggtgatcttaagtgtcgtagcagggtctgtagttgtggcagtgacagtggaggtcctgccgctagggctgaagaagtcaagagtgcgctatactcgcgagccgtgtcctcgcatgtgcaagtccttcggcgttcaaatcacaattctaccttcacctaccttttccaacgcaaaaatcgtcccctcaaggtcaccattgcaatgcctgagaggaaaatgccgcaccaccacggtcaacttctcagattctgattctcaacaatccagacgacgcccagatcagagcaaaacccagacccaatccgccaccgccgaaccaaaggctggaaacggccccaaaagccggttagaaaagcttccgaaccagaggcctcttgccgcaaacctctgtcgttgcagagactcaccccgcagcactccacaaacgccaccttgcttgagggaagagcgccgccaccagtcgaaacctaggtttcgtagcctctttgaaagtctcgtagctttgatggttagatgcaagtcttttttaagagaaagaactgtgcccaatgctaatctccaatccctcaaagcttcccccaatctcttctctcaccatcttctaaaaactctctcatccattgctgttccatctcataaccacatagcacatcttctactcgaacaaaaatcagccacccaggtcctcgacaccttccaatgggcctccaaactccccggcttcacccactccccgtccacttaccgagccctcatccacaagctatgcacctttcggcgcttcgacattgcccaccaagtgctcgacgaaatgccccactcaattggcctccccccagatgaccacattttcgtcacactcattcacggcctcggccgagctcatttggtgaagcaagtgatcaaggtgcttgacttggttcgcagatataaccagaaaccttctctgaagatattcaattcgattcttgatgttcttgtgaaggaggatatagatatagctagggagttttataggaagaagatggtggcaagtggtgtcaggggtgatgattatacttttggaacaattattaggttcacccctagggctattaagtcgaggggagttgcgccgaatactgtggtttataacacattgctgcatgcactttgcaggaatgggaaagttgggagagccagaagcttgatgaatgagatggaagaccccaatgatgtgacttttaatattttgatatctggttattgtggagaagagaatttggtgcaggcgcttgttatgttagacaagtgctttggtctggggtatgtgcctgatgttgtcacgacaaccaaggtgttggaaattctgtgcaatgatggtcgcgttatggaggctgtcaaggttatagagagagtggacagcaatggagggttggttgatgttgtggcatataataccttgattaagggttactgtcgattagggaaagcaaaacttggtcttcgcattttgaaggagatagagagaaaagggtgtcttccaaatgttgatacctacaatgtcttgatctcgggtttttgtgagtctgggatgttggataaagctcttgatttgtttaatgatatgaaaacagatggcatcaattggaattttgctacatatgatacgttaataagaggcttgtgttcaggaggaagaactgaagatgggttaaaaattttggatttgatgaatgagagcaaagatggttgtaggggtcgaataggtccttttaatagtgtcttgtatggcatgtataaggaaaaacgtttggacgaagcacttgagtttcttgccaatatgggtaaactatttcccagagctgttgataggagctttaggattttaggtttctgtgaggagggtgccactgagaatgcaaagaaggtctatgatcagatgattgtggaaagggcagtcccatgtgttttgatttatgactatctaatccatagattttgccaacaagggtgtgttcgtcaagcctttgagcttatgaatgagatgattgctcattgttactttcctgtttcatcgactttcaatgttctgattaacgggttttgtgagcaaggaaaagttggtagtgcgctaaagctcctcgatgagatgattggtagaggttgtttacctgatatagaaagttatagtcatttggtaggtgctttttgccagaagggggattttcagaaagctttaaaactcgttttgcaaatggtaggaaagggtatcactcctgattatttcacatggaactcgttgcttctttgttcaagtcgagagactgtatggttaaacagcaaaagtatgttttatgtgaacaatcaattacattgtattattgaggcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

845

Amino Acids

94.5

Weight (kDa)

9.26

Isoelectric Point (pI)

41.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17525
fragaria_vesca	FvH4_7g03710 FvH4_7g03710 FvH4_7g03710
malus_domestica	MD05G1037900.v1.1 MD10G1041700.v1.1
prunus_persica	Prupe.2G066000_v2.0.a1
pyrus_communis	pycom05g02810 pycom10g02880
rosa_chinensis	RchiOBHm_Chr1g0326501 RchiOBHm_Chr1g0326531 RchiOBHm_Chr1g0326571 RchiOBHm_Chr1g0326581
rosa_laevigata	RLG00000005572 RLG00000006170 RLG00000023929 RLG00000030068
rosa_multiflora	Rmu_sc0001355.1_g000018
rosa_roxburghii	Rroxscaffold_2G00146300 Rroxscaffold_4G00323710 Rroxscaffold_4G00327680
rosa_rugosa	Rorug01G0061000
rosa_samantha	Rh1BG062600 Rh1BG062800 Rh1CG075400 Rh1DG082100 Rh1DG082200 Rh1DG082400 Rh7BG001800 Rh7DG001700
rosa_wichuraiana	Rw1G006130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1296
Acc36I	ACCTGC	1 cut(s)	22
AccB1I	GGYRCC	2 cut(s)	49, 2051
AccB7I	CCANNNNNTGG	1 cut(s)	488
AccII	CGCG	4 cut(s)	144, 160, 261, 1530
AciI	CCGC	7 cut(s)	224, 385, 468, 474, 543, 574, 616
AclI	AACGTT	1 cut(s)	1954
AcoI	YGGCCR	1 cut(s)	1039
AcsI	RAATTY	4 cut(s)	1423, 1509, 1795, 1863
AcuI	CTGAAG	3 cut(s)	254, 1133, 1869
AcyI	GRCGYC	1 cut(s)	436
AdeI	CACNNNGTG	1 cut(s)	964
AfaI	GTAC	1 cut(s)	12
AfiI	CCNNNNNNNGG	4 cut(s)	488, 507, 864, 2365
AflII	CTTAAG	1 cut(s)	172
AgsI	TTSAA	8 cut(s)	7, 86, 299, 653, 1123, 1660, 2230, 2460
AjnI	CCWGG	2 cut(s)	52, 843
Alw21I	GWGCWC	2 cut(s)	969, 1048
Alw26I	GTCTC	3 cut(s)	558, 662, 2462
AlwNI	CAGNNNCTG	2 cut(s)	191, 413
Ama87I	CYCGRG	1 cut(s)	1717
AoxI	GGCC	8 cut(s)	99, 126, 496, 533, 867, 991, 1033, 1039
ApeKI	GCWGC	2 cut(s)	576, 1306
ApoI	RAATTY	4 cut(s)	1423, 1509, 1795, 1863
ArsI	GACNNNNNNTTYG	4 cut(s)	998, 1030, 1442, 1474
Asp700I	GAANNNNTTC	2 cut(s)	519, 1118
AspA2I	CCTAGG	2 cut(s)	632, 1250
AspLEI	GCGC	7 cut(s)	123, 252, 615, 945, 1279, 1438, 2278
AspS9I	GGNCC	7 cut(s)	33, 100, 217, 497, 847, 867, 1913
AsuC2I	CCSGG	1 cut(s)	882
AsuHPI	GGTGA	9 cut(s)	178, 309, 348, 561, 749, 880, 1066, 1223, 1237
AvaI	CYCGRG	1 cut(s)	1717
AvaII	GGWCC	4 cut(s)	33, 217, 847, 1913
AvrII	CCTAGG	2 cut(s)	632, 1250
BaeGI	GKGCMC	1 cut(s)	711
BanI	GGYRCC	2 cut(s)	49, 2051
BanII	GRGCYC	2 cut(s)	916, 1048
BbsI	GAAGAC	3 cut(s)	1374, 1640, 1676
Bbv12I	GWGCWC	2 cut(s)	969, 1048
BbvI	GCAGC	2 cut(s)	588, 1293
BccI	CCATC	9 cut(s)	664, 768, 802, 1183, 1357, 1517, 1775, 1847, 1886
BceAI	ACGGC	3 cut(s)	250, 511, 1048
BcgI	CGANNNNNNTGC	2 cut(s)	271, 305
BciT130I	CCWGG	2 cut(s)	54, 845
BclI	TGATCA	2 cut(s)	1065, 2080
BcnI	CCSGG	1 cut(s)	882
BcoDI	GTCTC	3 cut(s)	558, 662, 2462
BfaI	CTAG	5 cut(s)	108, 227, 633, 1167, 1251
BfmI	CTRYAG	1 cut(s)	192
BfoI	RGCGCY	3 cut(s)	616, 946, 1439
BfrI	CTTAAG	1 cut(s)	172
BfuAI	ACCTGC	1 cut(s)	22
BglI	GCCNNNNNGGC	1 cut(s)	229
BisI	GCNGC	6 cut(s)	224, 385, 543, 577, 616, 1307
BlnI	CCTAGG	2 cut(s)	632, 1250
BlsI	GCNGC	6 cut(s)	225, 386, 544, 578, 617, 1308
Bme1390I	CCNGG	3 cut(s)	54, 845, 882
Bme18I	GGWCC	4 cut(s)	33, 217, 847, 1913
BmeT110I	CYCGRG	1 cut(s)	1717
BmgT120I	GGNCC	7 cut(s)	33, 100, 217, 497, 847, 867, 1913
BmiI	GGNNCC	4 cut(s)	34, 51, 499, 2053
BmrFI	CCNGG	3 cut(s)	54, 845, 882
BmsI	GCATC	2 cut(s)	668, 1794
BpiI	GAAGAC	3 cut(s)	1374, 1640, 1676
BpuEI	CTTGAG	3 cut(s)	334, 622, 1991
BpuMI	CCSGG	1 cut(s)	882
BsaHI	GRCGYC	1 cut(s)	436
BsaJI	CCNNGG	7 cut(s)	393, 632, 843, 880, 1036, 1250, 1497
BsaXI	ACNNNNNCTCC	2 cut(s)	1566, 1596
Bsc4I	CCNNNNNNNGG	4 cut(s)	488, 507, 864, 2365
Bse118I	RCCGGY	2 cut(s)	67, 507
Bse1I	ACTGG	1 cut(s)	622
Bse3DI	GCAATG	7 cut(s)	359, 371, 783, 951, 1301, 1525, 1576
BseBI	CCWGG	2 cut(s)	54, 845
BseDI	CCNNGG	7 cut(s)	393, 632, 843, 880, 1036, 1250, 1497
BseGI	GGATG	3 cut(s)	779, 918, 1743
BseLI	CCNNNNNNNGG	4 cut(s)	488, 507, 864, 2365
BseMI	GCAATG	7 cut(s)	359, 371, 783, 951, 1301, 1525, 1576
BseMII	CTCAG	3 cut(s)	362, 420, 2049
BseNI	ACTGG	1 cut(s)	622
BseRI	GAGGAG	2 cut(s)	2060, 2276
BseSI	GKGCMC	1 cut(s)	711
BseX3I	CGGCCG	1 cut(s)	1039
BseXI	GCAGC	2 cut(s)	588, 1293
BsgI	GTGCAG	1 cut(s)	1451
Bsh1236I	CGCG	4 cut(s)	144, 160, 261, 1530
Bsh1285I	CGRYCG	1 cut(s)	1042
BshFI	GGCC	8 cut(s)	101, 128, 498, 535, 869, 993, 1035, 1041
BshNI	GGYRCC	2 cut(s)	49, 2051
BsiEI	CGRYCG	1 cut(s)	1042
BsiHKAI	GWGCWC	2 cut(s)	969, 1048
BsiHKCI	CYCGRG	1 cut(s)	1717
BsiSI	CCGG	3 cut(s)	68, 508, 882
BslFI	GGGAC	2 cut(s)	329, 2090
BslI	CCNNNNNNNGG	4 cut(s)	488, 507, 864, 2365
BsmAI	GTCTC	3 cut(s)	558, 662, 2462
BsmFI	GGGAC	2 cut(s)	329, 2090
BsmI	GAATGC	1 cut(s)	2068
BsnI	GGCC	8 cut(s)	101, 128, 498, 535, 869, 993, 1035, 1041
BsoBI	CYCGRG	1 cut(s)	1717
Bsp1286I	GDGCHC	4 cut(s)	711, 916, 969, 1048
Bsp143I	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
Bsp68I	TCGCGA	2 cut(s)	144, 261
BspACI	CCGC	7 cut(s)	224, 385, 468, 474, 543, 574, 616
BspANI	GGCC	8 cut(s)	101, 128, 498, 535, 869, 993, 1035, 1041
BspCNI	CTCAG	3 cut(s)	363, 419, 2050
BspFNI	CGCG	4 cut(s)	144, 160, 261, 1530
BspLI	GGNNCC	4 cut(s)	34, 51, 499, 2053
BspMI	ACCTGC	1 cut(s)	22
BspQI	GCTCTTC	1 cut(s)	603
BspT107I	GGYRCC	2 cut(s)	49, 2051
BspTI	CTTAAG	1 cut(s)	172
BsrDI	GCAATG	7 cut(s)	359, 371, 783, 951, 1301, 1525, 1576
BsrFI	RCCGGY	2 cut(s)	67, 507
BsrI	ACTGG	1 cut(s)	622
BssAI	RCCGGY	2 cut(s)	67, 507
BssECI	CCNNGG	7 cut(s)	393, 632, 843, 880, 1036, 1250, 1497
BssMI	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
BssNI	GRCGYC	1 cut(s)	436
BssT1I	CCWWGG	3 cut(s)	632, 1250, 1497
Bst2UI	CCWGG	2 cut(s)	54, 845
Bst4CI	ACNGT	6 cut(s)	211, 397, 706, 1288, 1622, 2473
Bst6I	CTCTTC	3 cut(s)	603, 755, 1413
BstACI	GRCGYC	1 cut(s)	436
BstAFI	CTTAAG	1 cut(s)	172
BstC8I	GCNNGC	3 cut(s)	263, 1311, 1434
BstDEI	CTNAG	3 cut(s)	371, 406, 2058
BstDSI	CCRYGG	1 cut(s)	393
BstEII	GGTNACC	1 cut(s)	354
BstF5I	GGATG	3 cut(s)	779, 918, 1743
BstFNI	CGCG	4 cut(s)	144, 160, 261, 1530
BstH2I	RGCGCY	3 cut(s)	616, 946, 1439
BstHHI	GCGC	7 cut(s)	123, 252, 615, 945, 1279, 1438, 2278
BstKTI	GATC	5 cut(s)	171, 445, 1068, 1716, 2083
BstMAI	GTCTC	3 cut(s)	558, 662, 2462
BstMBI	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
BstMCI	CGRYCG	1 cut(s)	1042
BstMWI	GCNNNNNNNGC	3 cut(s)	229, 258, 504
BstNI	CCWGG	2 cut(s)	54, 845
BstNSI	RCATGY	3 cut(s)	280, 1313, 1942
BstPI	GGTNACC	1 cut(s)	354
BstSCI	CCNGG	3 cut(s)	52, 843, 880
BstSFI	CTRYAG	1 cut(s)	192
BstSLI	GKGCMC	1 cut(s)	711
BstUI	CGCG	4 cut(s)	144, 160, 261, 1530
BstV1I	GCAGC	2 cut(s)	588, 1293
BstV2I	GAAGAC	3 cut(s)	1374, 1640, 1676
BstXI	CCANNNNNNTGG	2 cut(s)	989, 1504
BstZI	CGGCCG	1 cut(s)	1039
BsuRI	GGCC	8 cut(s)	101, 128, 498, 535, 869, 993, 1035, 1041
BtgI	CCRYGG	1 cut(s)	393
BtsCI	GGATG	3 cut(s)	779, 918, 1743
BtsI	GCAGTG	1 cut(s)	210
BtsIMutI	CAGTG	3 cut(s)	210, 216, 2055
BtuMI	TCGCGA	2 cut(s)	144, 261
BveI	ACCTGC	1 cut(s)	22
Cac8I	GCNNGC	3 cut(s)	263, 1311, 1434
CaiI	CAGNNNCTG	2 cut(s)	191, 413
CfoI	GCGC	7 cut(s)	123, 252, 615, 945, 1279, 1438, 2278
Cfr10I	RCCGGY	2 cut(s)	67, 507
Cfr13I	GGNCC	7 cut(s)	33, 100, 217, 497, 847, 867, 1913
CseI	GACGC	1 cut(s)	444
Csp6I	GTAC	1 cut(s)	11
CspCI	CAANNNNNGTGG	2 cut(s)	582, 617
CviAII	CATG	6 cut(s)	151, 277, 1310, 1939, 2109, 2436
CviQI	GTAC	1 cut(s)	11
DdeI	CTNAG	3 cut(s)	371, 406, 2058
DpnI	GATC	5 cut(s)	170, 444, 1067, 1715, 2082
DpnII	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
DraI	TTTAAA	1 cut(s)	2385
DraIII	CACNNNGTG	1 cut(s)	964
EaeI	YGGCCR	1 cut(s)	1039
EagI	CGGCCG	1 cut(s)	1039
Eam1104I	CTCTTC	3 cut(s)	603, 755, 1413
EarI	CTCTTC	3 cut(s)	603, 755, 1413
EciI	GGCGGA	1 cut(s)	457
Ecl136II	GAGCTC	1 cut(s)	1046
EclXI	CGGCCG	1 cut(s)	1039
Eco130I	CCWWGG	3 cut(s)	632, 1250, 1497
Eco147I	AGGCCT	1 cut(s)	535
Eco24I	GRGCYC	2 cut(s)	916, 1048
Eco32I	GATATC	1 cut(s)	1401
Eco47I	GGWCC	4 cut(s)	33, 217, 847, 1913
Eco52I	CGGCCG	1 cut(s)	1039
Eco53kI	GAGCTC	1 cut(s)	1046
Eco57I	CTGAAG	3 cut(s)	254, 1133, 1869
Eco88I	CYCGRG	1 cut(s)	1717
Eco91I	GGTNACC	1 cut(s)	354
EcoICRI	GAGCTC	1 cut(s)	1046
EcoO109I	RGGNCCY	3 cut(s)	217, 847, 1913
EcoO65I	GGTNACC	1 cut(s)	354
EcoRII	CCWGG	2 cut(s)	52, 843
EcoRV	GATATC	1 cut(s)	1401
EcoT14I	CCWWGG	3 cut(s)	632, 1250, 1497
EcoT38I	GRGCYC	2 cut(s)	916, 1048
ErhI	CCWWGG	3 cut(s)	632, 1250, 1497
FaeI	CATG	6 cut(s)	154, 280, 1313, 1942, 2112, 2439
FalI	AAGNNNNNCTT	4 cut(s)	1626, 1658, 1668, 1700
FaqI	GGGAC	2 cut(s)	329, 2090
FatI	CATG	6 cut(s)	150, 276, 1309, 1938, 2108, 2435
FauI	CCCGC	1 cut(s)	581
FauNDI	CATATG	1 cut(s)	1807
FbaI	TGATCA	2 cut(s)	1065, 2080
Fnu4HI	GCNGC	6 cut(s)	224, 385, 543, 577, 616, 1307
FokI	GGATG	3 cut(s)	766, 905, 1750
FriOI	GRGCYC	2 cut(s)	916, 1048
Fsp4HI	GCNGC	6 cut(s)	224, 385, 543, 577, 616, 1307
FspBI	CTAG	5 cut(s)	108, 227, 633, 1167, 1251
GlaI	GCGC	7 cut(s)	122, 251, 614, 944, 1278, 1437, 2277
GluI	GCNGC	6 cut(s)	224, 385, 543, 577, 616, 1307
HaeII	RGCGCY	3 cut(s)	616, 946, 1439
HaeIII	GGCC	8 cut(s)	101, 128, 498, 535, 869, 993, 1035, 1041
HapII	CCGG	3 cut(s)	68, 508, 882
HgaI	GACGC	1 cut(s)	444
HhaI	GCGC	7 cut(s)	123, 252, 615, 945, 1279, 1438, 2278
Hin1I	GRCGYC	1 cut(s)	436
Hin1II	CATG	6 cut(s)	154, 280, 1313, 1942, 2112, 2439
Hin6I	GCGC	7 cut(s)	121, 250, 613, 943, 1277, 1436, 2276
HinP1I	GCGC	7 cut(s)	121, 250, 613, 943, 1277, 1436, 2276
HincII	GTYRAC	2 cut(s)	63, 400
HindII	GTYRAC	2 cut(s)	63, 400
HindIII	AAGCTT	4 cut(s)	518, 735, 1348, 2379
HinfI	GANTC	5 cut(s)	410, 416, 566, 1129, 1730
HpaII	CCGG	3 cut(s)	68, 508, 882
HphI	GGTGA	9 cut(s)	178, 309, 348, 561, 749, 880, 1066, 1223, 1237
Hpy166II	GTNNAC	8 cut(s)	63, 400, 903, 1245, 1564, 1994, 2315, 2506
Hpy188I	TCNGA	9 cut(s)	133, 409, 415, 447, 525, 1113, 2085, 2238, 2376
Hpy8I	GTNNAC	8 cut(s)	63, 400, 903, 1245, 1564, 1994, 2315, 2506
Hpy99I	CGWCG	3 cut(s)	41, 438, 974
HpyAV	CCTTC	8 cut(s)	298, 324, 868, 1116, 1141, 1654, 2065, 2356
HpyCH4III	ACNGT	6 cut(s)	211, 397, 706, 1288, 1622, 2473
HpyCH4IV	ACGT	2 cut(s)	1814, 1954
HpyF10VI	GCNNNNNNNGC	3 cut(s)	229, 258, 504
HpyF3I	CTNAG	3 cut(s)	371, 406, 2058
HpySE526I	ACGT	2 cut(s)	1814, 1954
Hsp92I	GRCGYC	1 cut(s)	436
Hsp92II	CATG	6 cut(s)	154, 280, 1313, 1942, 2112, 2439
HspAI	GCGC	7 cut(s)	121, 250, 613, 943, 1277, 1436, 2276
Ksp22I	TGATCA	2 cut(s)	1065, 2080
Kzo9I	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
LguI	GCTCTTC	1 cut(s)	603
LmnI	GCTCC	2 cut(s)	2019, 2289
Lsp1109I	GCAGC	2 cut(s)	588, 1293
LweI	GCATC	2 cut(s)	668, 1794
MaeI	CTAG	5 cut(s)	108, 227, 633, 1167, 1251
MaeII	ACGT	2 cut(s)	1814, 1954
MaeIII	GTNAC	7 cut(s)	205, 354, 1018, 1381, 1486, 1616, 2204
MalI	GATC	5 cut(s)	170, 444, 1067, 1715, 2082
MboI	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
MfeI	CAATTG	3 cut(s)	72, 987, 1789
MhlI	GDGCHC	4 cut(s)	711, 916, 969, 1048
MlyI	GAGTC	2 cut(s)	560, 1739
MmeI	TCCRAC	3 cut(s)	354, 1485, 1722
MroXI	GAANNNNTTC	2 cut(s)	519, 1118
MslI	CAYNNNNRTG	1 cut(s)	364
MspCI	CTTAAG	1 cut(s)	172
MspI	CCGG	3 cut(s)	68, 508, 882
MspR9I	CCNGG	3 cut(s)	54, 845, 882
MunI	CAATTG	3 cut(s)	72, 987, 1789
Mva1269I	GAATGC	1 cut(s)	2068
MvaI	CCWGG	2 cut(s)	54, 845
MvnI	CGCG	4 cut(s)	144, 160, 261, 1530
MwoI	GCNNNNNNNGC	3 cut(s)	229, 258, 504
NciI	CCSGG	1 cut(s)	882
NdeI	CATATG	1 cut(s)	1807
NdeII	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
NlaIII	CATG	6 cut(s)	154, 280, 1313, 1942, 2112, 2439
NlaIV	GGNNCC	4 cut(s)	34, 51, 499, 2053
NmeAIII	GCCGAG	3 cut(s)	104, 1017, 1067
NmuCI	GTSAC	5 cut(s)	205, 354, 1018, 1381, 1486
NruI	TCGCGA	2 cut(s)	144, 261
NspI	RCATGY	3 cut(s)	280, 1313, 1942
PaeI	GCATGC	1 cut(s)	1313
PceI	AGGCCT	1 cut(s)	535
PciSI	GCTCTTC	1 cut(s)	603
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PctI	GAATGC	1 cut(s)	2068
PdmI	GAANNNNTTC	2 cut(s)	519, 1118
PfeI	GAWTC	3 cut(s)	410, 416, 1129
PflMI	CCANNNNNTGG	1 cut(s)	488
PkrI	GCNGC	6 cut(s)	225, 386, 544, 578, 617, 1308
PleI	GAGTC	2 cut(s)	560, 1738
PpsI	GAGTC	2 cut(s)	560, 1738
PpuMI	RGGWCCY	3 cut(s)	217, 847, 1913
PsiI	TTATAA	1 cut(s)	1296
Psp124BI	GAGCTC	1 cut(s)	1048
Psp1406I	AACGTT	1 cut(s)	1954
Psp5II	RGGWCCY	3 cut(s)	217, 847, 1913
Psp6I	CCWGG	2 cut(s)	52, 843
PspEI	GGTNACC	1 cut(s)	354
PspGI	CCWGG	2 cut(s)	52, 843
PspN4I	GGNNCC	4 cut(s)	34, 51, 499, 2053
PspPI	GGNCC	7 cut(s)	33, 100, 217, 497, 847, 867, 1913
PspPPI	RGGWCCY	3 cut(s)	217, 847, 1913
PstNI	CAGNNNCTG	2 cut(s)	191, 413
RruI	TCGCGA	2 cut(s)	144, 261
RsaI	GTAC	1 cut(s)	12
RsaNI	GTAC	1 cut(s)	11
RseI	CAYNNNNRTG	1 cut(s)	364
SacI	GAGCTC	1 cut(s)	1048
SapI	GCTCTTC	1 cut(s)	603
SatI	GCNGC	6 cut(s)	224, 385, 543, 577, 616, 1307
Sau3AI	GATC	5 cut(s)	168, 442, 1065, 1713, 2080
Sau96I	GGNCC	7 cut(s)	33, 100, 217, 497, 847, 867, 1913
SchI	GAGTC	2 cut(s)	560, 1739
ScrFI	CCNGG	3 cut(s)	54, 845, 882
SduI	GDGCHC	4 cut(s)	711, 916, 969, 1048
SfaNI	GCATC	2 cut(s)	668, 1794
SfcI	CTRYAG	1 cut(s)	192
SinI	GGWCC	4 cut(s)	33, 217, 847, 1913
SmiMI	CAYNNNNRTG	1 cut(s)	364
SmlI	CTYRAG	4 cut(s)	172, 349, 601, 1970
SmoI	CTYRAG	4 cut(s)	172, 349, 601, 1970
SphI	GCATGC	1 cut(s)	1313
SseBI	AGGCCT	1 cut(s)	535
SsiI	CCGC	7 cut(s)	224, 385, 468, 474, 543, 574, 616
SspI	AATATT	1 cut(s)	1393
SspMI	CTAG	5 cut(s)	108, 227, 633, 1167, 1251
SstI	GAGCTC	1 cut(s)	1048
StuI	AGGCCT	1 cut(s)	535
StyD4I	CCNGG	3 cut(s)	52, 843, 880
StyI	CCWWGG	3 cut(s)	632, 1250, 1497
TaaI	ACNGT	6 cut(s)	211, 397, 706, 1288, 1622, 2473
TaiI	ACGT	2 cut(s)	1817, 1957
TauI	GCSGC	4 cut(s)	226, 387, 545, 618
TfiI	GAWTC	3 cut(s)	410, 416, 1129
TscAI	CASTG	3 cut(s)	210, 216, 2062
TseFI	GTSAC	5 cut(s)	205, 354, 1018, 1381, 1486
TseI	GCWGC	2 cut(s)	576, 1306
Tsp45I	GTSAC	5 cut(s)	205, 354, 1018, 1381, 1486
TspDTI	ATGAA	5 cut(s)	1370, 1787, 1892, 2198, 2208
TspGWI	ACGGA	1 cut(s)	25
TspRI	CASTG	3 cut(s)	210, 216, 2062
Van91I	CCANNNNNTGG	1 cut(s)	488
Vha464I	CTTAAG	1 cut(s)	172
VpaK11BI	GGWCC	4 cut(s)	33, 217, 847, 1913
XapI	RAATTY	4 cut(s)	1423, 1509, 1795, 1863
XceI	RCATGY	3 cut(s)	280, 1313, 1942
XmaJI	CCTAGG	2 cut(s)	632, 1250
XmnI	GAANNNNTTC	2 cut(s)	519, 1118
XspI	CTAG	5 cut(s)	108, 227, 633, 1167, 1251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.