Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0008405

Physical Location & Seq

Genomic Coordinates Forward (+)

23826556 .. 23828997

Gene Structure 2442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g25950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGAAGAGGTTGAGATCCAGCGACGATCTCGATTCCTTCAGTAAGGATCCGAATCCTAACCCGAACCCGAGCTCCAACCCCGGCCGGACCTCCTCCTCCTCTTCGCACCGGAGCTTCTACTACAAGCCAGATACTGTGCGCAAGGGTTTGCTCTCTTCGTCCTCCTCCGCATCTTCGAAAGGGCCGGCTCGCTCCTACGACGATCGGGAACCGGCCGGCTCCGGCGGCGGGTCCAGAACTGTCCGGAAGAGGACGGAGCACGAGTTCGACGGTTTCGATAGGAGGAAGGGGACCGATCGGTACAACAGGGATGGCGGAGGGTACGATCGTAATTTGATGCACCGGTCCGAGAGCTTCTCCGCGTCCAGGAGGTCGCCGGCGGAGTTTCCGAAAGGGTTTCGATCGGAGAGGGACAGGTCCAGGCGCGAAGGCAGCGGGAGCGGAGCGTTGTCGTGGCGTAGGTTCGGGAAGGAGTTCGAGGAGAGAGGAGGAGGGAAGGGGTTGAGGGACGTGAGGTCGCCGACGTGGTCGAATTCGAGGGATTCGGGGAGCGAGCAGTCTAGGGTTAGGTCTCCGGTGCGGAGGTTTAGGGATGGGAAGGGGTCGAAATCGGAGTCCAAGTCCAAGTCTCCGACTTGGTCCAAGGACTCGGTGGGGAGTGAGCAGTCGAAGAGTGTTGAGGTGAGGAAGAAGGAAACGGAGGCGGAGGCTGAAGAGATTCAGGGTGAGCAGCCAAAGAGTGTTGAGGTGAGGAAGAGAGAGACGGAGACGGAGACGGAGGAGGTTCCGGTGGAGCGGCCAAAGAGTGTTGAGGTGAGGAAGAGGGAGACGGAGACGGAGACGGAGACGGAGACAGAGGAGGTTCAGGCTGAGAAGGGGAGTAGGAGTAGTAGTGAAATGGAGGAGGGTGAGCTTGACCCGGAAGCTGGAGCTGGTGGTGGAGGTGAGCCCCAATTGGGCCTTGAAGGCGGAGCTGAAACGGAAGAAGCACAGATCCGAAGCGCTTCTTTGGTTACAGATACAGATAAGGTTGAGGAGAAAGCTGAGACTATGGATAAACAAGAGGCTAGGGAGGAGAAAGGCGAGTCCTCCGATAAACAAGAGGTGAAAGATGAAAATAAAGGGAGTGTGTGTGAAAGGCAAGATGAGGAGGAGGAGAAGAAAGATGATGACTTACCAAATAGCGAGATCGATATGATTGATCAAAGCGGGAATGTGGAAGCTCGTGAAGATGAGGGAAAAGGGAGTTTCAGGGAAGGTGATGAAGAAGTGGTCGTGGAGATTCCGAAGGAATTGGAAAAGGAACCAAAGCAAGATAAGGGAATAGACCTTGAAGTGAAGGCGGAGGATGATGACGACGAAATGACAGAGTCAGATAAGGTGGTAACCGAGGATGAGGAGGATAATGAAGTGGTTAAGCTGAATACGGTGGATATGAGTATGAGTTTGAGTCAGAATTTTAAGGATAAAGGTAAAAGCGTGGCCGTGGCACCAGCCGATCTGGTGGATTCAGCTGAAGATGGTCGGTGGGTTGGCAGAGAATCCAGAGAGCTGCTCACTGGTATGGAAAATGATATGGAAGGACCCAGCAGTAGGGGTTTCGAGTTGTTTTCAAGCTCTCCGGTTAGGAGACAGGAGAAGGCTGATCAATCTGGTGCTAGTATGAAGGATGAGAAGTTGGCACTTGAGCCTCTTGATCTTTCTCTTAGCTTGCCTAACGTTTTGTTACCCATTGGTGGCGCAGCTCCTGGTTCTCCTGATCAATCAATGAGTGTTCAGTCTCTAAGTAATACTTTTCGTACTAACTCTGATGGATTTACTCAGTCAGTATCCTTTTCAGGCTCGCAGTCGTTTTATCACAACCCTAGCTGTTCGCTAACCACCCAGAATTCGATGGACTTTGAACAGTCGGTTAAAAGTCGTCCCCTTTTCCAGGGAATTGATTGGCAGGCACTCGCTCAGAGTGAGGCTAAGGGTAAAGAAGTTCCTTGGCAAGCACTCACTCAGAATGATGCTAAGAGTAAAGAAGTCCCTTTGTATCAAAGAATCTTGATGAATGGAAACGGGTCTCAACAACAACAGTCTCAAGCATCGCAAGGCATTCCAAATGGTCAGTTGGGCCAAGGGCAACAACATCTTAGACATCCTGAAGGAAGCCCTAAAGTGGCGAATGGAATGGAAAGGCAGCTGAGCTTCCACAAGCAGTTGTCAGGAGGACAGGCAAGGAACCATGAGGATGTTAGATCACCTTCAAATAGCGTTGGATCTCATGAAATGGGATCAAACTATAGTTTTGACAGGAAACGGCTAATGAGAGAGAAAAGTAGTGGTAGTTTATATAGGACTAGCAGTCAGAAGGAACAAGAGCAGTTTCTCATTGGTGGAGCTGATTTTGTGGAGACAATCGTTGCCAGGATTGTCTCCGATCGACCATACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009880 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0030154 GO:0032501 GO:0032502 GO:0045165 GO:0048507 GO:0048532 GO:0048856 GO:0048869 GO:0090421

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oberon_cc PHD_Oberon

Protein Analysis

814

Amino Acids

90.07

Weight (kDa)

4.98

Isoelectric Point (pI)

67.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008405)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63500 AT3G63500 AT3G63500
fragaria_vesca	FvH4_7g01270 FvH4_7g01270 FvH4_7g01270
malus_domestica	MD02G1308100.v1.1 MD07G1017600.v1.1
prunus_persica	Prupe.2G017300_v2.0.a1 Prupe.2G017300_v2.0.a1
pyrus_communis	pycom02g25950 pycom03g08770 pycom07g01340
rosa_chinensis	RchiOBHm_Chr1g0317021
rosa_laevigata	RLG00000030632
rosa_multiflora	Rmu_sc0006455.1_g000004
rosa_roxburghii	Rroxscaffold_4G00330730
rosa_rugosa	Rorug01G0013900
rosa_samantha	Rh1AG025000 Rh1BG021800 Rh1CG023400 Rh1DG022200
rosa_wichuraiana	Rw1G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	140
AccB1I	GGYRCC	1 cut(s)	1489
AccBSI	CCGCTC	2 cut(s)	441, 796
AccII	CGCG	2 cut(s)	362, 426
AccIII	TCCGGA	1 cut(s)	243
AclI	AACGTT	1 cut(s)	1719
AclWI	GGATC	6 cut(s)	9, 41, 54, 988, 2272, 2287
AcoI	YGGCCR	4 cut(s)	82, 213, 797, 1482
AcsI	RAATTY	3 cut(s)	532, 1456, 1888
AcuI	CTGAAG	4 cut(s)	22, 732, 1536, 2169
AfaI	GTAC	3 cut(s)	302, 323, 1801
AfeI	AGCGCT	1 cut(s)	1003
AfiI	CCNNNNNNNGG	8 cut(s)	228, 366, 926, 956, 1593, 1736, 1933, 2164
AflIII	ACRYGT	1 cut(s)	2436
AgeI	ACCGGT	1 cut(s)	342
AgsI	TTSAA	5 cut(s)	965, 1334, 1614, 1904, 2253
AhdI	GACNNNNNGTC	2 cut(s)	514, 2349
AjiI	CACGTC	2 cut(s)	511, 525
AjnI	CCWGG	5 cut(s)	365, 419, 1747, 1932, 2411
AloI	GAACNNNNNNTCC	4 cut(s)	56, 88, 248, 280
Alw21I	GWGCWC	2 cut(s)	74, 261
AlwI	GGATC	6 cut(s)	9, 41, 54, 988, 2272, 2287
AlwNI	CAGNNNCTG	2 cut(s)	134, 1748
Ama87I	CYCGRG	1 cut(s)	67
Aor13HI	TCCGGA	1 cut(s)	243
Aor51HI	AGCGCT	1 cut(s)	1003
AoxI	GGCC	7 cut(s)	82, 182, 213, 797, 958, 1482, 2119
ApeKI	GCWGC	5 cut(s)	432, 730, 1552, 1742, 2185
ApoI	RAATTY	3 cut(s)	532, 1456, 1888
ArsI	GACNNNNNNTTYG	2 cut(s)	599, 631
AsiGI	ACCGGT	1 cut(s)	342
Asp700I	GAANNNNTTC	3 cut(s)	473, 717, 1003
AspLEI	GCGC	4 cut(s)	141, 426, 1004, 1742
AsuC2I	CCSGG	2 cut(s)	81, 920
AsuHPI	GGTGA	9 cut(s)	694, 737, 760, 826, 920, 956, 1117, 1271, 2238
AsuII	TTCGAA	1 cut(s)	176
AvaI	CYCGRG	1 cut(s)	67
AvaII	GGWCC	7 cut(s)	87, 231, 291, 345, 417, 639, 1583
BaeI	ACNNNNGTAYC	2 cut(s)	313, 346
BamHI	GGATCC	1 cut(s)	46
BanI	GGYRCC	1 cut(s)	1489
BanII	GRGCYC	2 cut(s)	74, 951
BauI	CACGAG	2 cut(s)	260, 1224
Bbv12I	GWGCWC	2 cut(s)	74, 261
BbvI	GCAGC	5 cut(s)	444, 742, 1539, 1754, 2197
BccI	CCATC	5 cut(s)	305, 587, 1514, 1805, 1888
BceAI	ACGGC	2 cut(s)	1469, 2321
BciT130I	CCWGG	5 cut(s)	367, 421, 1749, 1934, 2413
BciVI	GTATCC	1 cut(s)	1840
BclI	TGATCA	3 cut(s)	1201, 1645, 1759
BcnI	CCSGG	2 cut(s)	81, 920
BfaI	CTAG	5 cut(s)	561, 1068, 1659, 1866, 2346
BfmI	CTRYAG	1 cut(s)	2287
BfoI	RGCGCY	1 cut(s)	1005
BfuI	GTATCC	1 cut(s)	1840
BglI	GCCNNNNNGGC	1 cut(s)	966
BisI	GCNGC	7 cut(s)	226, 433, 731, 797, 1553, 1743, 2186
BlpI	GCTNAGC	1 cut(s)	2189
BlsI	GCNGC	7 cut(s)	227, 434, 732, 798, 1554, 1744, 2187
Bme1390I	CCNGG	7 cut(s)	81, 367, 421, 920, 1749, 1934, 2413
Bme18I	GGWCC	7 cut(s)	87, 231, 291, 345, 417, 639, 1583
BmeRI	GACNNNNNGTC	2 cut(s)	514, 2349
BmeT110I	CYCGRG	1 cut(s)	67
BmgBI	CACGTC	2 cut(s)	511, 525
BmrFI	CCNGG	7 cut(s)	81, 367, 421, 920, 1749, 1934, 2413
BmsI	GCATC	4 cut(s)	179, 327, 2002, 2099
BplI	GAGNNNNNCTC	4 cut(s)	341, 373, 1539, 1571
BpmI	CTGGAG	1 cut(s)	948
Bpu10I	CCTNAGC	1 cut(s)	1971
Bpu1102I	GCTNAGC	1 cut(s)	2189
Bpu14I	TTCGAA	1 cut(s)	176
BpuEI	CTTGAG	2 cut(s)	1706, 2070
BpuMI	CCSGG	2 cut(s)	81, 920
Bsa29I	ATCGAT	1 cut(s)	1191
BsaBI	GATNNNNATC	1 cut(s)	51
BsaI	GGTCTC	2 cut(s)	576, 2073
BsaJI	CCNNGG	7 cut(s)	79, 642, 1389, 1485, 1933, 1988, 2122
BsaWI	WCCGGW	6 cut(s)	108, 243, 342, 574, 787, 1621
Bsc4I	CCNNNNNNNGG	8 cut(s)	228, 366, 926, 956, 1593, 1736, 1933, 2164
Bse118I	RCCGGY	5 cut(s)	184, 211, 215, 342, 376
Bse1I	ACTGG	1 cut(s)	1564
Bse8I	GATNNNNATC	1 cut(s)	51
BseAI	TCCGGA	1 cut(s)	243
BseBI	CCWGG	5 cut(s)	367, 421, 1749, 1934, 2413
BseCI	ATCGAT	1 cut(s)	1191
BseDI	CCNNGG	7 cut(s)	79, 642, 1389, 1485, 1933, 1988, 2122
BseGI	GGATG	7 cut(s)	316, 598, 1354, 1399, 1675, 2143, 2242
BseJI	GATNNNNATC	1 cut(s)	51
BseLI	CCNNNNNNNGG	8 cut(s)	228, 366, 926, 956, 1593, 1736, 1933, 2164
BseMII	CTCAG	6 cut(s)	861, 1035, 1835, 1973, 2018, 2180
BseNI	ACTGG	1 cut(s)	1564
BseX3I	CGGCCG	2 cut(s)	82, 213
BseXI	GCAGC	5 cut(s)	444, 742, 1539, 1754, 2197
BseYI	CCCAGC	1 cut(s)	1586
Bsh1236I	CGCG	2 cut(s)	362, 426
Bsh1285I	CGRYCG	7 cut(s)	85, 205, 216, 298, 328, 404, 2428
BshFI	GGCC	7 cut(s)	84, 184, 215, 799, 960, 1484, 2121
BshNI	GGYRCC	1 cut(s)	1489
BshTI	ACCGGT	1 cut(s)	342
BshVI	ATCGAT	1 cut(s)	1191
BsiEI	CGRYCG	7 cut(s)	85, 205, 216, 298, 328, 404, 2428
BsiHKAI	GWGCWC	2 cut(s)	74, 261
BsiHKCI	CYCGRG	1 cut(s)	67
BslFI	GGGAC	5 cut(s)	304, 425, 521, 1908, 2015
BslI	CCNNNNNNNGG	8 cut(s)	228, 366, 926, 956, 1593, 1736, 1933, 2164
BsmBI	CGTCTC	7 cut(s)	755, 761, 767, 821, 827, 833, 839
BsmFI	GGGAC	5 cut(s)	304, 425, 521, 1908, 2015
BsmI	GAATGC	1 cut(s)	2100
BsnI	GGCC	7 cut(s)	84, 184, 215, 799, 960, 1484, 2121
Bso31I	GGTCTC	2 cut(s)	576, 2073
BsoBI	CYCGRG	1 cut(s)	67
Bsp119I	TTCGAA	1 cut(s)	176
Bsp1286I	GDGCHC	3 cut(s)	74, 261, 951
Bsp13I	TCCGGA	1 cut(s)	243
Bsp1720I	GCTNAGC	1 cut(s)	2189
BspANI	GGCC	7 cut(s)	84, 184, 215, 799, 960, 1484, 2121
BspCNI	CTCAG	6 cut(s)	862, 1036, 1834, 1972, 2017, 2181
BspDI	ATCGAT	1 cut(s)	1191
BspEI	TCCGGA	1 cut(s)	243
BspFNI	CGCG	2 cut(s)	362, 426
BspHI	TCATGA	1 cut(s)	2269
BspPI	GGATC	6 cut(s)	9, 41, 54, 988, 2272, 2287
BspT104I	TTCGAA	1 cut(s)	176
BspT107I	GGYRCC	1 cut(s)	1489
BspTNI	GGTCTC	2 cut(s)	576, 2073
BsrBI	CCGCTC	2 cut(s)	441, 796
BsrFI	RCCGGY	5 cut(s)	184, 211, 215, 342, 376
BsrI	ACTGG	1 cut(s)	1564
BssAI	RCCGGY	5 cut(s)	184, 211, 215, 342, 376
BssECI	CCNNGG	7 cut(s)	79, 642, 1389, 1485, 1933, 1988, 2122
BssSI	CACGAG	2 cut(s)	260, 1224
BssT1I	CCWWGG	3 cut(s)	642, 1988, 2122
Bst2BI	CACGAG	2 cut(s)	260, 1224
Bst2UI	CCWGG	5 cut(s)	367, 421, 1749, 1934, 2413
Bst4CI	ACNGT	6 cut(s)	136, 241, 272, 1429, 1908, 2082
Bst6I	CTCTTC	7 cut(s)	106, 160, 242, 665, 708, 749, 815
BstBI	TTCGAA	1 cut(s)	176
BstC8I	GCNNGC	9 cut(s)	186, 190, 217, 378, 554, 1712, 1844, 1950, 1995
BstDSI	CCRYGG	1 cut(s)	1485
BstEII	GGTNACC	1 cut(s)	1384
BstENI	CCTNNNNNAGG	1 cut(s)	1931
BstF5I	GGATG	7 cut(s)	316, 598, 1354, 1399, 1675, 2143, 2242
BstFNI	CGCG	2 cut(s)	362, 426
BstH2I	RGCGCY	1 cut(s)	1005
BstHHI	GCGC	4 cut(s)	141, 426, 1004, 1742
BstMCI	CGRYCG	7 cut(s)	85, 205, 216, 298, 328, 404, 2428
BstMWI	GCNNNNNNNGC	4 cut(s)	225, 432, 438, 966
BstNI	CCWGG	5 cut(s)	367, 421, 1749, 1934, 2413
BstNSI	RCATGY	1 cut(s)	2440
BstPI	GGTNACC	1 cut(s)	1384
BstSCI	CCNGG	7 cut(s)	79, 365, 419, 918, 1747, 1932, 2411
BstSFI	CTRYAG	1 cut(s)	2287
BstUI	CGCG	2 cut(s)	362, 426
BstV1I	GCAGC	5 cut(s)	444, 742, 1539, 1754, 2197
BstX2I	RGATCY	4 cut(s)	14, 46, 993, 2264
BstYI	RGATCY	4 cut(s)	14, 46, 993, 2264
BstZI	CGGCCG	2 cut(s)	82, 213
Bsu15I	ATCGAT	1 cut(s)	1191
BsuI	GTATCC	1 cut(s)	1840
BsuRI	GGCC	7 cut(s)	84, 184, 215, 799, 960, 1484, 2121
BsuTUI	ATCGAT	1 cut(s)	1191
BtgI	CCRYGG	1 cut(s)	1485
BtgZI	GCGATG	1 cut(s)	2076
BtrI	CACGTC	2 cut(s)	511, 525
BtsCI	GGATG	7 cut(s)	316, 598, 1354, 1399, 1675, 2143, 2242
BtsIMutI	CAGTG	1 cut(s)	1557
Cac8I	GCNNGC	9 cut(s)	186, 190, 217, 378, 554, 1712, 1844, 1950, 1995
CaiI	CAGNNNCTG	2 cut(s)	134, 1748
CciI	TCATGA	1 cut(s)	2269
CfoI	GCGC	4 cut(s)	141, 426, 1004, 1742
Cfr10I	RCCGGY	5 cut(s)	184, 211, 215, 342, 376
ClaI	ATCGAT	1 cut(s)	1191
CpoI	CGGWCCG	1 cut(s)	345
CseI	GACGC	1 cut(s)	351
Csp6I	GTAC	3 cut(s)	301, 322, 1800
CspAI	ACCGGT	1 cut(s)	342
CspI	CGGWCCG	1 cut(s)	345
CviAII	CATG	3 cut(s)	2231, 2270, 2437
CviQI	GTAC	3 cut(s)	301, 322, 1800
DriI	GACNNNNNGTC	2 cut(s)	514, 2349
EaeI	YGGCCR	4 cut(s)	82, 213, 797, 1482
EagI	CGGCCG	2 cut(s)	82, 213
Eam1104I	CTCTTC	7 cut(s)	106, 160, 242, 665, 708, 749, 815
Eam1105I	GACNNNNNGTC	2 cut(s)	514, 2349
EarI	CTCTTC	7 cut(s)	106, 160, 242, 665, 708, 749, 815
EciI	GGCGGA	5 cut(s)	330, 395, 719, 984, 1358
Ecl136II	GAGCTC	1 cut(s)	72
EclXI	CGGCCG	2 cut(s)	82, 213
Eco130I	CCWWGG	3 cut(s)	642, 1988, 2122
Eco24I	GRGCYC	2 cut(s)	74, 951
Eco31I	GGTCTC	2 cut(s)	576, 2073
Eco47I	GGWCC	7 cut(s)	87, 231, 291, 345, 417, 639, 1583
Eco47III	AGCGCT	1 cut(s)	1003
Eco52I	CGGCCG	2 cut(s)	82, 213
Eco53kI	GAGCTC	1 cut(s)	72
Eco57I	CTGAAG	4 cut(s)	22, 732, 1536, 2169
Eco88I	CYCGRG	1 cut(s)	67
Eco91I	GGTNACC	1 cut(s)	1384
EcoICRI	GAGCTC	1 cut(s)	72
EcoNI	CCTNNNNNAGG	1 cut(s)	1931
EcoO109I	RGGNCCY	1 cut(s)	1583
EcoO65I	GGTNACC	1 cut(s)	1384
EcoRI	GAATTC	2 cut(s)	532, 1888
EcoRII	CCWGG	5 cut(s)	365, 419, 1747, 1932, 2411
EcoT14I	CCWWGG	3 cut(s)	642, 1988, 2122
EcoT38I	GRGCYC	2 cut(s)	74, 951
ErhI	CCWWGG	3 cut(s)	642, 1988, 2122
Esp3I	CGTCTC	7 cut(s)	755, 761, 767, 821, 827, 833, 839
FaeI	CATG	3 cut(s)	2234, 2273, 2440
FalI	AAGNNNNNCTT	4 cut(s)	991, 1023, 1777, 1809
FaqI	GGGAC	5 cut(s)	304, 425, 521, 1908, 2015
FatI	CATG	3 cut(s)	2230, 2269, 2436
FauI	CCCGC	3 cut(s)	221, 428, 1202
FbaI	TGATCA	3 cut(s)	1201, 1645, 1759
Fnu4HI	GCNGC	7 cut(s)	226, 433, 731, 797, 1553, 1743, 2186
FokI	GGATG	7 cut(s)	323, 605, 1361, 1406, 1682, 2130, 2249
FriOI	GRGCYC	2 cut(s)	74, 951
Fsp4HI	GCNGC	7 cut(s)	226, 433, 731, 797, 1553, 1743, 2186
FspBI	CTAG	5 cut(s)	561, 1068, 1659, 1866, 2346
FspI	TGCGCA	1 cut(s)	140
GlaI	GCGC	4 cut(s)	140, 425, 1003, 1741
GluI	GCNGC	7 cut(s)	226, 433, 731, 797, 1553, 1743, 2186
GsaI	CCCAGC	1 cut(s)	1590
GsuI	CTGGAG	1 cut(s)	948
HaeII	RGCGCY	1 cut(s)	1005
HaeIII	GGCC	7 cut(s)	84, 184, 215, 799, 960, 1484, 2121
HgaI	GACGC	1 cut(s)	351
HhaI	GCGC	4 cut(s)	141, 426, 1004, 1742
Hin1II	CATG	3 cut(s)	2234, 2273, 2440
Hin6I	GCGC	4 cut(s)	139, 424, 1002, 1740
HinP1I	GCGC	4 cut(s)	139, 424, 1002, 1740
HphI	GGTGA	9 cut(s)	694, 737, 760, 826, 920, 956, 1117, 1271, 2238
Hpy99I	CGWCG	5 cut(s)	26, 203, 272, 526, 1361
HpyCH4III	ACNGT	6 cut(s)	136, 241, 272, 1429, 1908, 2082
HpyCH4IV	ACGT	3 cut(s)	510, 524, 1719
HpyCH4V	TGCA	1 cut(s)	340
HpyF10VI	GCNNNNNNNGC	4 cut(s)	225, 432, 438, 966
HpySE526I	ACGT	3 cut(s)	510, 524, 1719
Hsp92II	CATG	3 cut(s)	2234, 2273, 2440
HspAI	GCGC	4 cut(s)	139, 424, 1002, 1740
Kpn2I	TCCGGA	1 cut(s)	243
KroI	GCCGGC	3 cut(s)	184, 215, 376
KroNI	GCCGGC	3 cut(s)	186, 217, 378
Ksp22I	TGATCA	3 cut(s)	1201, 1645, 1759
Lsp1109I	GCAGC	5 cut(s)	444, 742, 1539, 1754, 2197
LweI	GCATC	4 cut(s)	179, 327, 2002, 2099
MaeI	CTAG	5 cut(s)	561, 1068, 1659, 1866, 2346
MaeII	ACGT	3 cut(s)	510, 524, 1719
MaeIII	GTNAC	3 cut(s)	1012, 1384, 1725
MbiI	CCGCTC	2 cut(s)	441, 796
MfeI	CAATTG	1 cut(s)	953
MflI	RGATCY	4 cut(s)	14, 46, 993, 2264
MhlI	GDGCHC	3 cut(s)	74, 261, 951
MluCI	AATT	7 cut(s)	331, 532, 953, 1292, 1456, 1888, 1938
MlyI	GAGTC	5 cut(s)	623, 641, 1094, 1379, 1459
MmeI	TCCRAC	3 cut(s)	99, 656, 2242
MreI	CGCCGGCG	1 cut(s)	376
MroI	TCCGGA	1 cut(s)	243
MroNI	GCCGGC	3 cut(s)	184, 215, 376
MroXI	GAANNNNTTC	3 cut(s)	473, 717, 1003
MseI	TTAA	3 cut(s)	1416, 1461, 1914
MslI	CAYNNNNRTG	2 cut(s)	1562, 2235
MspA1I	CMGCKG	3 cut(s)	435, 1514, 2188
MspR9I	CCNGG	7 cut(s)	81, 367, 421, 920, 1749, 1934, 2413
MunI	CAATTG	1 cut(s)	953
Mva1269I	GAATGC	1 cut(s)	2100
MvaI	CCWGG	5 cut(s)	367, 421, 1749, 1934, 2413
MvnI	CGCG	2 cut(s)	362, 426
MwoI	GCNNNNNNNGC	4 cut(s)	225, 432, 438, 966
NaeI	GCCGGC	3 cut(s)	186, 217, 378
NciI	CCSGG	2 cut(s)	81, 920
NgoMIV	GCCGGC	3 cut(s)	184, 215, 376
NlaIII	CATG	3 cut(s)	2234, 2273, 2440
NsbI	TGCGCA	1 cut(s)	140
NspI	RCATGY	1 cut(s)	2440
NspV	TTCGAA	1 cut(s)	176
PagI	TCATGA	1 cut(s)	2269
PciI	ACATGT	1 cut(s)	2436
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	1 cut(s)	2100
PdiI	GCCGGC	3 cut(s)	186, 217, 378
PdmI	GAANNNNTTC	3 cut(s)	473, 717, 1003
PfeI	GAWTC	8 cut(s)	32, 52, 542, 718, 1282, 1508, 1541, 2046
PflFI	GACNNNGTC	3 cut(s)	526, 637, 1369
PfoI	TCCNGGA	1 cut(s)	365
PinAI	ACCGGT	1 cut(s)	342
PkrI	GCNGC	7 cut(s)	227, 434, 732, 798, 1554, 1744, 2187
Ple19I	CGATCG	5 cut(s)	205, 298, 328, 404, 2428
PleI	GAGTC	5 cut(s)	622, 641, 1093, 1378, 1458
PpsI	GAGTC	5 cut(s)	622, 641, 1093, 1378, 1458
PpuMI	RGGWCCY	1 cut(s)	1583
PscI	ACATGT	1 cut(s)	2436
Psp124BI	GAGCTC	1 cut(s)	74
Psp1406I	AACGTT	1 cut(s)	1719
Psp5II	RGGWCCY	1 cut(s)	1583
Psp6I	CCWGG	5 cut(s)	365, 419, 1747, 1932, 2411
PspEI	GGTNACC	1 cut(s)	1384
PspFI	CCCAGC	1 cut(s)	1586
PspGI	CCWGG	5 cut(s)	365, 419, 1747, 1932, 2411
PspPPI	RGGWCCY	1 cut(s)	1583
PstNI	CAGNNNCTG	2 cut(s)	134, 1748
PsuI	RGATCY	4 cut(s)	14, 46, 993, 2264
PsyI	GACNNNGTC	3 cut(s)	526, 637, 1369
PvuI	CGATCG	5 cut(s)	205, 298, 328, 404, 2428
PvuII	CAGCTG	2 cut(s)	1514, 2188
RsaI	GTAC	3 cut(s)	302, 323, 1801
RsaNI	GTAC	3 cut(s)	301, 322, 1800
RseI	CAYNNNNRTG	2 cut(s)	1562, 2235
Rsr2I	CGGWCCG	1 cut(s)	345
RsrII	CGGWCCG	1 cut(s)	345
SacI	GAGCTC	1 cut(s)	74
SaqAI	TTAA	3 cut(s)	1416, 1461, 1914
SatI	GCNGC	7 cut(s)	226, 433, 731, 797, 1553, 1743, 2186
SchI	GAGTC	5 cut(s)	623, 641, 1094, 1379, 1459
ScrFI	CCNGG	7 cut(s)	81, 367, 421, 920, 1749, 1934, 2413
SduI	GDGCHC	3 cut(s)	74, 261, 951
SfaNI	GCATC	4 cut(s)	179, 327, 2002, 2099
SfcI	CTRYAG	1 cut(s)	2287
SfuI	TTCGAA	1 cut(s)	176
SgrAI	CRCCGGYG	1 cut(s)	376
SinI	GGWCC	7 cut(s)	87, 231, 291, 345, 417, 639, 1583
SmiMI	CAYNNNNRTG	2 cut(s)	1562, 2235
SmlI	CTYRAG	2 cut(s)	1685, 2085
SmoI	CTYRAG	2 cut(s)	1685, 2085
Sse9I	AATT	7 cut(s)	331, 532, 953, 1292, 1456, 1888, 1938
SspMI	CTAG	5 cut(s)	561, 1068, 1659, 1866, 2346
SstI	GAGCTC	1 cut(s)	74
StyD4I	CCNGG	7 cut(s)	79, 365, 419, 918, 1747, 1932, 2411
StyI	CCWWGG	3 cut(s)	642, 1988, 2122
TaaI	ACNGT	6 cut(s)	136, 241, 272, 1429, 1908, 2082
TaiI	ACGT	3 cut(s)	513, 527, 1722
TaqII	GACCGA	1 cut(s)	308
TasI	AATT	7 cut(s)	331, 532, 953, 1292, 1456, 1888, 1938
TauI	GCSGC	2 cut(s)	228, 799
TfiI	GAWTC	8 cut(s)	32, 52, 542, 718, 1282, 1508, 1541, 2046
Tru1I	TTAA	3 cut(s)	1416, 1461, 1914
Tru9I	TTAA	3 cut(s)	1416, 1461, 1914
TscAI	CASTG	1 cut(s)	1564
TseI	GCWGC	5 cut(s)	432, 730, 1552, 1742, 2185
TspDTI	ATGAA	7 cut(s)	17, 1128, 1278, 1422, 1679, 2069, 2286
TspRI	CASTG	1 cut(s)	1564
Tth111I	GACNNNGTC	3 cut(s)	526, 637, 1369
VpaK11BI	GGWCC	7 cut(s)	87, 231, 291, 345, 417, 639, 1583
XagI	CCTNNNNNAGG	1 cut(s)	1931
XapI	RAATTY	3 cut(s)	532, 1456, 1888
XceI	RCATGY	1 cut(s)	2440
XcmI	CCANNNNNNNNNTGG	1 cut(s)	649
XmnI	GAANNNNTTC	3 cut(s)	473, 717, 1003
XspI	CTAG	5 cut(s)	561, 1068, 1659, 1866, 2346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.