Coiled-coil region of Oberon
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63500 AT3G63500 AT3G63500 |
| fragaria_vesca | FvH4_7g01270 FvH4_7g01270 FvH4_7g01270 |
| malus_domestica | MD02G1308100.v1.1 MD07G1017600.v1.1 |
| prunus_persica | Prupe.2G017300_v2.0.a1 Prupe.2G017300_v2.0.a1 |
| pyrus_communis | pycom02g25950 pycom03g08770 pycom07g01340 |
| rosa_chinensis | RchiOBHm_Chr1g0317021 |
| rosa_laevigata | RLG00000030632 |
| rosa_multiflora | Rmu_sc0006455.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00330730 |
| rosa_rugosa | Rorug01G0013900 |
| rosa_samantha | Rh1AG025000 Rh1BG021800 Rh1CG023400 Rh1DG022200 |
| rosa_wichuraiana | Rw1G001730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 288 |
| AccB1I | GGYRCC | 4 cut(s) | 997, 1691, 2106, 2772 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2329, 2934 |
| AccI | GTMKAC | 2 cut(s) | 288, 2533 |
| AccII | CGCG | 4 cut(s) | 231, 436, 455, 2391 |
| AccIII | TCCGGA | 1 cut(s) | 3070 |
| AcoI | YGGCCR | 2 cut(s) | 240, 2331 |
| AcsI | RAATTY | 4 cut(s) | 1214, 1426, 1840, 2979 |
| AcuI | CTGAAG | 2 cut(s) | 1023, 2531 |
| AcvI | CACGTG | 1 cut(s) | 3404 |
| AcyI | GRCGYC | 1 cut(s) | 285 |
| AfaI | GTAC | 7 cut(s) | 203, 353, 1202, 1638, 1753, 1996, 2597 |
| AfeI | AGCGCT | 1 cut(s) | 2689 |
| AflIII | ACRYGT | 2 cut(s) | 2735, 3401 |
| AgeI | ACCGGT | 2 cut(s) | 372, 429 |
| AgsI | TTSAA | 8 cut(s) | 1328, 1432, 1845, 2069, 2945, 2966, 3473, 3515 |
| AhlI | ACTAGT | 1 cut(s) | 917 |
| AjnI | CCWGG | 6 cut(s) | 1699, 1884, 2300, 2954, 3145, 3192 |
| Alw21I | GWGCWC | 3 cut(s) | 1550, 2711, 3571 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 866, 1361 |
| Ama87I | CYCGRG | 3 cut(s) | 79, 577, 842 |
| Aor13HI | TCCGGA | 1 cut(s) | 3070 |
| Aor51HI | AGCGCT | 1 cut(s) | 2689 |
| ApeKI | GCWGC | 7 cut(s) | 450, 591, 2074, 2238, 2366, 2685, 3283 |
| ApoI | RAATTY | 4 cut(s) | 1214, 1426, 1840, 2979 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 281, 313, 647, 653, 679, 685 |
| AsiGI | ACCGGT | 2 cut(s) | 372, 429 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 410, 2614, 3655 |
| AspLEI | GCGC | 5 cut(s) | 455, 457, 1906, 2418, 2690 |
| AspS9I | GGNCC | 8 cut(s) | 87, 427, 681, 1453, 1541, 3185, 3232, 3378 |
| AsuC2I | CCSGG | 1 cut(s) | 209 |
| AsuHPI | GGTGA | 6 cut(s) | 277, 736, 911, 992, 1114, 2127 |
| AsuNHI | GCTAGC | 1 cut(s) | 1906 |
| AvaI | CYCGRG | 3 cut(s) | 79, 577, 842 |
| AvaII | GGWCC | 4 cut(s) | 87, 427, 681, 1541 |
| AxyI | CCTNAGG | 1 cut(s) | 867 |
| BaeGI | GKGCMC | 2 cut(s) | 2109, 2500 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 343, 376 |
| BalI | TGGCCA | 1 cut(s) | 2333 |
| BamHI | GGATCC | 1 cut(s) | 46 |
| BanI | GGYRCC | 4 cut(s) | 997, 1691, 2106, 2772 |
| BanII | GRGCYC | 7 cut(s) | 56, 771, 795, 813, 843, 951, 3571 |
| BbrPI | CACGTG | 1 cut(s) | 3404 |
| BbsI | GAAGAC | 1 cut(s) | 2756 |
| Bbv12I | GWGCWC | 3 cut(s) | 1550, 2711, 3571 |
| BbvCI | CCTCAGC | 4 cut(s) | 819, 1338, 3429, 3519 |
| BbvI | GCAGC | 7 cut(s) | 462, 603, 2086, 2250, 2378, 2697, 3295 |
| BccI | CCATC | 9 cut(s) | 256, 310, 968, 1073, 1190, 1479, 1757, 2499, 3595 |
| BceAI | ACGGC | 3 cut(s) | 352, 547, 3029 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2833, 2867 |
| BciT130I | CCWGG | 6 cut(s) | 1701, 1886, 2302, 2956, 3147, 3194 |
| BciVI | GTATCC | 1 cut(s) | 3100 |
| BclI | TGATCA | 3 cut(s) | 1711, 2875, 3031 |
| BcnI | CCSGG | 1 cut(s) | 209 |
| BcuI | ACTAGT | 1 cut(s) | 917 |
| BfaI | CTAG | 9 cut(s) | 918, 1551, 1818, 1907, 2235, 3158, 3255, 3267, 3560 |
| BfmI | CTRYAG | 2 cut(s) | 2447, 3551 |
| BfoI | RGCGCY | 2 cut(s) | 1907, 2691 |
| BfuI | GTATCC | 1 cut(s) | 3100 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2495 |
| BglII | AGATCT | 1 cut(s) | 3619 |
| BlpI | GCTNAGC | 1 cut(s) | 2078 |
| Bme1390I | CCNGG | 7 cut(s) | 209, 1701, 1886, 2302, 2956, 3147, 3194 |
| Bme18I | GGWCC | 4 cut(s) | 87, 427, 681, 1541 |
| BmeT110I | CYCGRG | 3 cut(s) | 79, 577, 842 |
| BmgT120I | GGNCC | 8 cut(s) | 87, 427, 681, 1453, 1541, 3185, 3232, 3378 |
| BmrFI | CCNGG | 7 cut(s) | 209, 1701, 1886, 2302, 2956, 3147, 3194 |
| BmsI | GCATC | 5 cut(s) | 357, 561, 2466, 2594, 2841 |
| BmtI | GCTAGC | 1 cut(s) | 1910 |
| BpiI | GAAGAC | 1 cut(s) | 2756 |
| BpmI | CTGGAG | 1 cut(s) | 1407 |
| Bpu10I | CCTNAGC | 5 cut(s) | 819, 837, 1338, 3429, 3519 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2078 |
| BpuEI | CTTGAG | 8 cut(s) | 965, 1661, 2142, 2507, 2620, 2820, 3122, 3563 |
| BpuMI | CCSGG | 1 cut(s) | 209 |
| BsaAI | YACGTR | 1 cut(s) | 3404 |
| BsaHI | GRCGYC | 1 cut(s) | 285 |
| BsaI | GGTCTC | 3 cut(s) | 618, 737, 1163 |
| BsaJI | CCNNGG | 8 cut(s) | 620, 873, 1885, 2469, 2928, 2955, 3146, 3381 |
| BsaWI | WCCGGW | 5 cut(s) | 372, 429, 555, 961, 3070 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 490, 493, 520, 523, 1265, 1295, 3296, 3326 |
| Bse118I | RCCGGY | 4 cut(s) | 242, 277, 372, 429 |
| Bse1I | ACTGG | 6 cut(s) | 1390, 1969, 2318, 2533, 2833, 3456 |
| Bse21I | CCTNAGG | 1 cut(s) | 867 |
| Bse3DI | GCAATG | 4 cut(s) | 1725, 1975, 2295, 2789 |
| BseAI | TCCGGA | 1 cut(s) | 3070 |
| BseBI | CCWGG | 6 cut(s) | 1701, 1886, 2302, 2956, 3147, 3194 |
| BseDI | CCNNGG | 8 cut(s) | 620, 873, 1885, 2469, 2928, 2955, 3146, 3381 |
| BseMI | GCAATG | 4 cut(s) | 1725, 1975, 2295, 2789 |
| BseNI | ACTGG | 6 cut(s) | 1390, 1969, 2318, 2533, 2833, 3456 |
| BsePI | GCGCGC | 1 cut(s) | 453 |
| BseSI | GKGCMC | 2 cut(s) | 2109, 2500 |
| BseX3I | CGGCCG | 1 cut(s) | 240 |
| BseXI | GCAGC | 7 cut(s) | 462, 603, 2086, 2250, 2378, 2697, 3295 |
| BseYI | CCCAGC | 1 cut(s) | 3182 |
| BsgI | GTGCAG | 1 cut(s) | 2578 |
| Bsh1236I | CGCG | 4 cut(s) | 231, 436, 455, 2391 |
| Bsh1285I | CGRYCG | 8 cut(s) | 208, 229, 243, 358, 377, 419, 434, 560 |
| BshNI | GGYRCC | 4 cut(s) | 997, 1691, 2106, 2772 |
| BshTI | ACCGGT | 2 cut(s) | 372, 429 |
| BsiEI | CGRYCG | 8 cut(s) | 208, 229, 243, 358, 377, 419, 434, 560 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1550, 2711, 3571 |
| BsiHKCI | CYCGRG | 3 cut(s) | 79, 577, 842 |
| BsiWI | CGTACG | 1 cut(s) | 201 |
| BslFI | GGGAC | 4 cut(s) | 268, 440, 1860, 2854 |
| BsmBI | CGTCTC | 3 cut(s) | 213, 327, 3004 |
| BsmFI | GGGAC | 4 cut(s) | 268, 440, 1860, 2854 |
| BsmI | GAATGC | 1 cut(s) | 2385 |
| Bso31I | GGTCTC | 3 cut(s) | 618, 737, 1163 |
| BsoBI | CYCGRG | 3 cut(s) | 79, 577, 842 |
| Bsp13I | TCCGGA | 1 cut(s) | 3070 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2078 |
| Bsp68I | TCGCGA | 2 cut(s) | 231, 2391 |
| BspEI | TCCGGA | 1 cut(s) | 3070 |
| BspFNI | CGCG | 4 cut(s) | 231, 436, 455, 2391 |
| BspHI | TCATGA | 1 cut(s) | 2344 |
| BspMAI | CTGCAG | 2 cut(s) | 2451, 3555 |
| BspOI | GCTAGC | 1 cut(s) | 1910 |
| BspQI | GCTCTTC | 1 cut(s) | 978 |
| BspT107I | GGYRCC | 4 cut(s) | 997, 1691, 2106, 2772 |
| BspTNI | GGTCTC | 3 cut(s) | 618, 737, 1163 |
| BsrDI | GCAATG | 4 cut(s) | 1725, 1975, 2295, 2789 |
| BsrFI | RCCGGY | 4 cut(s) | 242, 277, 372, 429 |
| BsrI | ACTGG | 6 cut(s) | 1390, 1969, 2318, 2533, 2833, 3456 |
| BssAI | RCCGGY | 4 cut(s) | 242, 277, 372, 429 |
| BssECI | CCNNGG | 8 cut(s) | 620, 873, 1885, 2469, 2928, 2955, 3146, 3381 |
| BssHII | GCGCGC | 1 cut(s) | 453 |
| BssNI | GRCGYC | 1 cut(s) | 285 |
| BssT1I | CCWWGG | 2 cut(s) | 2469, 2928 |
| Bst2UI | CCWGG | 6 cut(s) | 1701, 1886, 2302, 2956, 3147, 3194 |
| Bst4CI | ACNGT | 6 cut(s) | 41, 1063, 1205, 1986, 3083, 3116 |
| Bst6I | CTCTTC | 8 cut(s) | 106, 163, 181, 266, 725, 978, 1092, 1125 |
| BstACI | GRCGYC | 1 cut(s) | 285 |
| BstBAI | YACGTR | 1 cut(s) | 3404 |
| BstEII | GGTNACC | 1 cut(s) | 2133 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1883, 3071 |
| BstFNI | CGCG | 4 cut(s) | 231, 436, 455, 2391 |
| BstH2I | RGCGCY | 2 cut(s) | 1907, 2691 |
| BstHHI | GCGC | 5 cut(s) | 455, 457, 1906, 2418, 2690 |
| BstMCI | CGRYCG | 8 cut(s) | 208, 229, 243, 358, 377, 419, 434, 560 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 191, 336, 463, 2113, 2495, 2786, 3413 |
| BstNI | CCWGG | 6 cut(s) | 1701, 1886, 2302, 2956, 3147, 3194 |
| BstNSI | RCATGY | 4 cut(s) | 2366, 2373, 2422, 2739 |
| BstPI | GGTNACC | 1 cut(s) | 2133 |
| BstSCI | CCNGG | 7 cut(s) | 207, 1699, 1884, 2300, 2954, 3145, 3192 |
| BstSFI | CTRYAG | 2 cut(s) | 2447, 3551 |
| BstSLI | GKGCMC | 2 cut(s) | 2109, 2500 |
| BstUI | CGCG | 4 cut(s) | 231, 436, 455, 2391 |
| BstV1I | GCAGC | 7 cut(s) | 462, 603, 2086, 2250, 2378, 2697, 3295 |
| BstV2I | GAAGAC | 1 cut(s) | 2756 |
| BstX2I | RGATCY | 7 cut(s) | 14, 25, 46, 2153, 2831, 3154, 3619 |
| BstYI | RGATCY | 7 cut(s) | 14, 25, 46, 2153, 2831, 3154, 3619 |
| BstZI | CGGCCG | 1 cut(s) | 240 |
| Bsu36I | CCTNAGG | 1 cut(s) | 867 |
| BsuI | GTATCC | 1 cut(s) | 3100 |
| BtsI | GCAGTG | 4 cut(s) | 2444, 2566, 2827, 3178 |
| BtsIMutI | CAGTG | 7 cut(s) | 1383, 1397, 2444, 2566, 2827, 3178, 3449 |
| BtuMI | TCGCGA | 2 cut(s) | 231, 2391 |
| CaiI | CAGNNNCTG | 2 cut(s) | 866, 1361 |
| CciI | TCATGA | 1 cut(s) | 2344 |
| CfoI | GCGC | 5 cut(s) | 455, 457, 1906, 2418, 2690 |
| Cfr10I | RCCGGY | 4 cut(s) | 242, 277, 372, 429 |
| Cfr13I | GGNCC | 8 cut(s) | 87, 427, 681, 1453, 1541, 3185, 3232, 3378 |
| CseI | GACGC | 1 cut(s) | 2826 |
| Csp6I | GTAC | 7 cut(s) | 202, 352, 1201, 1637, 1752, 1995, 2596 |
| CspAI | ACCGGT | 2 cut(s) | 372, 429 |
| CviQI | GTAC | 7 cut(s) | 202, 352, 1201, 1637, 1752, 1995, 2596 |
| DraI | TTTAAA | 1 cut(s) | 631 |
| EaeI | YGGCCR | 2 cut(s) | 240, 2331 |
| EagI | CGGCCG | 1 cut(s) | 240 |
| Eam1104I | CTCTTC | 8 cut(s) | 106, 163, 181, 266, 725, 978, 1092, 1125 |
| EarI | CTCTTC | 8 cut(s) | 106, 163, 181, 266, 725, 978, 1092, 1125 |
| EciI | GGCGGA | 4 cut(s) | 160, 264, 296, 606 |
| Ecl136II | GAGCTC | 1 cut(s) | 3569 |
| EclXI | CGGCCG | 1 cut(s) | 240 |
| Eco130I | CCWWGG | 2 cut(s) | 2469, 2928 |
| Eco24I | GRGCYC | 7 cut(s) | 56, 771, 795, 813, 843, 951, 3571 |
| Eco31I | GGTCTC | 3 cut(s) | 618, 737, 1163 |
| Eco47I | GGWCC | 4 cut(s) | 87, 427, 681, 1541 |
| Eco47III | AGCGCT | 1 cut(s) | 2689 |
| Eco52I | CGGCCG | 1 cut(s) | 240 |
| Eco53kI | GAGCTC | 1 cut(s) | 3569 |
| Eco57I | CTGAAG | 2 cut(s) | 1023, 2531 |
| Eco72I | CACGTG | 1 cut(s) | 3404 |
| Eco81I | CCTNAGG | 1 cut(s) | 867 |
| Eco88I | CYCGRG | 3 cut(s) | 79, 577, 842 |
| Eco91I | GGTNACC | 1 cut(s) | 2133 |
| EcoICRI | GAGCTC | 1 cut(s) | 3569 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1883, 3071 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3232 |
| EcoO65I | GGTNACC | 1 cut(s) | 2133 |
| EcoRI | GAATTC | 1 cut(s) | 1840 |
| EcoRII | CCWGG | 6 cut(s) | 1699, 1884, 2300, 2954, 3145, 3192 |
| EcoT14I | CCWWGG | 2 cut(s) | 2469, 2928 |
| EcoT38I | GRGCYC | 7 cut(s) | 56, 771, 795, 813, 843, 951, 3571 |
| ErhI | CCWWGG | 2 cut(s) | 2469, 2928 |
| Esp3I | CGTCTC | 3 cut(s) | 213, 327, 3004 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 927, 959 |
| FaqI | GGGAC | 4 cut(s) | 268, 440, 1860, 2854 |
| FauI | CCCGC | 4 cut(s) | 149, 432, 2787, 3369 |
| FbaI | TGATCA | 3 cut(s) | 1711, 2875, 3031 |
| FblI | GTMKAC | 2 cut(s) | 288, 2533 |
| FriOI | GRGCYC | 7 cut(s) | 56, 771, 795, 813, 843, 951, 3571 |
| FspBI | CTAG | 9 cut(s) | 918, 1551, 1818, 1907, 2235, 3158, 3255, 3267, 3560 |
| GlaI | GCGC | 5 cut(s) | 454, 456, 1905, 2417, 2689 |
| GsaI | CCCAGC | 1 cut(s) | 3186 |
| GsuI | CTGGAG | 1 cut(s) | 1407 |
| HaeII | RGCGCY | 2 cut(s) | 1907, 2691 |
| HgaI | GACGC | 1 cut(s) | 2826 |
| HhaI | GCGC | 5 cut(s) | 455, 457, 1906, 2418, 2690 |
| Hin1I | GRCGYC | 1 cut(s) | 285 |
| Hin6I | GCGC | 5 cut(s) | 453, 455, 1904, 2416, 2688 |
| HinP1I | GCGC | 5 cut(s) | 453, 455, 1904, 2416, 2688 |
| HincII | GTYRAC | 1 cut(s) | 289 |
| HindII | GTYRAC | 1 cut(s) | 289 |
| HindIII | AAGCTT | 3 cut(s) | 112, 1663, 2080 |
| HphI | GGTGA | 6 cut(s) | 277, 736, 911, 992, 1114, 2127 |
| Hpy166II | GTNNAC | 4 cut(s) | 289, 1826, 2534, 3079 |
| Hpy8I | GTNNAC | 4 cut(s) | 289, 1826, 2534, 3079 |
| Hpy99I | CGWCG | 5 cut(s) | 227, 290, 293, 568, 649 |
| HpyCH4III | ACNGT | 6 cut(s) | 41, 1063, 1205, 1986, 3083, 3116 |
| HpyCH4IV | ACGT | 2 cut(s) | 285, 3403 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 191, 336, 463, 2113, 2495, 2786, 3413 |
| HpySE526I | ACGT | 2 cut(s) | 285, 3403 |
| Hsp92I | GRCGYC | 1 cut(s) | 285 |
| HspAI | GCGC | 5 cut(s) | 453, 455, 1904, 2416, 2688 |
| Kpn2I | TCCGGA | 1 cut(s) | 3070 |
| KroI | GCCGGC | 2 cut(s) | 242, 277 |
| KroNI | GCCGGC | 2 cut(s) | 244, 279 |
| Ksp22I | TGATCA | 3 cut(s) | 1711, 2875, 3031 |
| LguI | GCTCTTC | 1 cut(s) | 978 |
| Lsp1109I | GCAGC | 7 cut(s) | 462, 603, 2086, 2250, 2378, 2697, 3295 |
| LweI | GCATC | 5 cut(s) | 357, 561, 2466, 2594, 2841 |
| MaeI | CTAG | 9 cut(s) | 918, 1551, 1818, 1907, 2235, 3158, 3255, 3267, 3560 |
| MaeII | ACGT | 2 cut(s) | 285, 3403 |
| MaeIII | GTNAC | 4 cut(s) | 1372, 1680, 2133, 3083 |
| MfeI | CAATTG | 1 cut(s) | 2501 |
| MflI | RGATCY | 7 cut(s) | 14, 25, 46, 2153, 2831, 3154, 3619 |
| MlsI | TGGCCA | 1 cut(s) | 2333 |
| MluNI | TGGCCA | 1 cut(s) | 2333 |
| MlyI | GAGTC | 4 cut(s) | 1367, 1414, 2635, 3314 |
| MmeI | TCCRAC | 9 cut(s) | 357, 375, 501, 1263, 2131, 2603, 2723, 3222, 3333 |
| Mox20I | TGGCCA | 1 cut(s) | 2333 |
| MroI | TCCGGA | 1 cut(s) | 3070 |
| MroNI | GCCGGC | 2 cut(s) | 242, 277 |
| MroXI | GAANNNNTTC | 3 cut(s) | 410, 2614, 3655 |
| MscI | TGGCCA | 1 cut(s) | 2333 |
| MseI | TTAA | 9 cut(s) | 630, 1614, 1736, 1866, 2028, 2402, 2973, 3615, 3629 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2124 |
| Msp20I | TGGCCA | 1 cut(s) | 2333 |
| MspR9I | CCNGG | 7 cut(s) | 209, 1701, 1886, 2302, 2956, 3147, 3194 |
| MunI | CAATTG | 1 cut(s) | 2501 |
| Mva1269I | GAATGC | 1 cut(s) | 2385 |
| MvaI | CCWGG | 6 cut(s) | 1701, 1886, 2302, 2956, 3147, 3194 |
| MvnI | CGCG | 4 cut(s) | 231, 436, 455, 2391 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 191, 336, 463, 2113, 2495, 2786, 3413 |
| NaeI | GCCGGC | 2 cut(s) | 244, 279 |
| NciI | CCSGG | 1 cut(s) | 209 |
| NgoMIV | GCCGGC | 2 cut(s) | 242, 277 |
| NheI | GCTAGC | 1 cut(s) | 1906 |
| NmeAIII | GCCGAG | 4 cut(s) | 645, 898, 1055, 3406 |
| NmuCI | GTSAC | 2 cut(s) | 1372, 2133 |
| NruI | TCGCGA | 2 cut(s) | 231, 2391 |
| NspI | RCATGY | 4 cut(s) | 2366, 2373, 2422, 2739 |
| PaeI | GCATGC | 1 cut(s) | 2422 |
| PaeR7I | CTCGAG | 1 cut(s) | 577 |
| PagI | TCATGA | 1 cut(s) | 2344 |
| PauI | GCGCGC | 1 cut(s) | 453 |
| PciI | ACATGT | 1 cut(s) | 2735 |
| PciSI | GCTCTTC | 1 cut(s) | 978 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 228, 342, 401, 650, 1277, 3571 |
| PctI | GAATGC | 1 cut(s) | 2385 |
| PdiI | GCCGGC | 2 cut(s) | 244, 279 |
| PdmI | GAANNNNTTC | 3 cut(s) | 410, 2614, 3655 |
| PfeI | GAWTC | 9 cut(s) | 32, 584, 689, 1402, 1466, 1499, 1604, 2798, 3245 |
| Pfl23II | CGTACG | 1 cut(s) | 201 |
| PflFI | GACNNNGTC | 2 cut(s) | 679, 1357 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2329, 2934 |
| PinAI | ACCGGT | 2 cut(s) | 372, 429 |
| Ple19I | CGATCG | 3 cut(s) | 229, 358, 419 |
| PleI | GAGTC | 4 cut(s) | 1366, 1414, 2634, 3313 |
| PmaCI | CACGTG | 1 cut(s) | 3404 |
| PmlI | CACGTG | 1 cut(s) | 3404 |
| PpsI | GAGTC | 4 cut(s) | 1366, 1414, 2634, 3313 |
| Ppu21I | YACGTR | 1 cut(s) | 3404 |
| PscI | ACATGT | 1 cut(s) | 2735 |
| Psp124BI | GAGCTC | 1 cut(s) | 3571 |
| Psp6I | CCWGG | 6 cut(s) | 1699, 1884, 2300, 2954, 3145, 3192 |
| PspCI | CACGTG | 1 cut(s) | 3404 |
| PspEI | GGTNACC | 1 cut(s) | 2133 |
| PspFI | CCCAGC | 1 cut(s) | 3182 |
| PspGI | CCWGG | 6 cut(s) | 1699, 1884, 2300, 2954, 3145, 3192 |
| PspLI | CGTACG | 1 cut(s) | 201 |
| PspPI | GGNCC | 8 cut(s) | 87, 427, 681, 1453, 1541, 3185, 3232, 3378 |
| PspXI | VCTCGAGB | 1 cut(s) | 577 |
| PstI | CTGCAG | 2 cut(s) | 2451, 3555 |
| PstNI | CAGNNNCTG | 2 cut(s) | 866, 1361 |
| PsuI | RGATCY | 7 cut(s) | 14, 25, 46, 2153, 2831, 3154, 3619 |
| PsyI | GACNNNGTC | 2 cut(s) | 679, 1357 |
| PteI | GCGCGC | 1 cut(s) | 453 |
| PvuI | CGATCG | 3 cut(s) | 229, 358, 419 |
| RruI | TCGCGA | 2 cut(s) | 231, 2391 |
| RsaI | GTAC | 7 cut(s) | 203, 353, 1202, 1638, 1753, 1996, 2597 |
| RsaNI | GTAC | 7 cut(s) | 202, 352, 1201, 1637, 1752, 1995, 2596 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2124 |
| SacI | GAGCTC | 1 cut(s) | 3571 |
| SalI | GTCGAC | 1 cut(s) | 287 |
| SapI | GCTCTTC | 1 cut(s) | 978 |
| SaqAI | TTAA | 9 cut(s) | 630, 1614, 1736, 1866, 2028, 2402, 2973, 3615, 3629 |
| Sau96I | GGNCC | 8 cut(s) | 87, 427, 681, 1453, 1541, 3185, 3232, 3378 |
| SchI | GAGTC | 4 cut(s) | 1367, 1414, 2635, 3314 |
| ScrFI | CCNGG | 7 cut(s) | 209, 1701, 1886, 2302, 2956, 3147, 3194 |
| SfaNI | GCATC | 5 cut(s) | 357, 561, 2466, 2594, 2841 |
| SfcI | CTRYAG | 2 cut(s) | 2447, 3551 |
| Sfr274I | CTCGAG | 1 cut(s) | 577 |
| SgrDI | CGTCGACG | 1 cut(s) | 287 |
| SinI | GGWCC | 4 cut(s) | 87, 427, 681, 1541 |
| SlaI | CTCGAG | 1 cut(s) | 577 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2124 |
| SmlI | CTYRAG | 9 cut(s) | 577, 944, 1640, 2157, 2522, 2599, 2835, 3101, 3542 |
| SmoI | CTYRAG | 9 cut(s) | 577, 944, 1640, 2157, 2522, 2599, 2835, 3101, 3542 |
| SpeI | ACTAGT | 1 cut(s) | 917 |
| SphI | GCATGC | 1 cut(s) | 2422 |
| SspI | AATATT | 2 cut(s) | 2511, 3581 |
| SspMI | CTAG | 9 cut(s) | 918, 1551, 1818, 1907, 2235, 3158, 3255, 3267, 3560 |
| SstI | GAGCTC | 1 cut(s) | 3571 |
| StyD4I | CCNGG | 7 cut(s) | 207, 1699, 1884, 2300, 2954, 3145, 3192 |
| StyI | CCWWGG | 2 cut(s) | 2469, 2928 |
| TaaI | ACNGT | 6 cut(s) | 41, 1063, 1205, 1986, 3083, 3116 |
| TaiI | ACGT | 2 cut(s) | 288, 3406 |
| TaqII | GACCGA | 2 cut(s) | 761, 1558 |
| TatI | WGTACW | 1 cut(s) | 2595 |
| TfiI | GAWTC | 9 cut(s) | 32, 584, 689, 1402, 1466, 1499, 1604, 2798, 3245 |
| Tru1I | TTAA | 9 cut(s) | 630, 1614, 1736, 1866, 2028, 2402, 2973, 3615, 3629 |
| Tru9I | TTAA | 9 cut(s) | 630, 1614, 1736, 1866, 2028, 2402, 2973, 3615, 3629 |
| TscAI | CASTG | 7 cut(s) | 1390, 1404, 2451, 2566, 2827, 3178, 3456 |
| TseFI | GTSAC | 2 cut(s) | 1372, 2133 |
| TseI | GCWGC | 7 cut(s) | 450, 591, 2074, 2238, 2366, 2685, 3283 |
| Tsp45I | GTSAC | 2 cut(s) | 1372, 2133 |
| TspGWI | ACGGA | 2 cut(s) | 2691, 3494 |
| TspRI | CASTG | 7 cut(s) | 1390, 1404, 2451, 2566, 2827, 3178, 3456 |
| Tth111I | GACNNNGTC | 2 cut(s) | 679, 1357 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2329, 2934 |
| VpaK11BI | GGWCC | 4 cut(s) | 87, 427, 681, 1541 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1883, 3071 |
| XapI | RAATTY | 4 cut(s) | 1214, 1426, 1840, 2979 |
| XbaI | TCTAGA | 1 cut(s) | 3559 |
| XceI | RCATGY | 4 cut(s) | 2366, 2373, 2422, 2739 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2719 |
| XhoI | CTCGAG | 1 cut(s) | 577 |
| XmiI | GTMKAC | 2 cut(s) | 288, 2533 |
| XmnI | GAANNNNTTC | 3 cut(s) | 410, 2614, 3655 |
| XspI | CTAG | 9 cut(s) | 918, 1551, 1818, 1907, 2235, 3158, 3255, 3267, 3560 |
| ZraI | GACGTC | 1 cut(s) | 286 |