RLG00000030632

Coiled-coil region of Oberon

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
64702363 .. 64706822
4460 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030632

Sequence Viewer

Length: 3675 bp
ATGAAGAGGCTGAGATCCAGCGAGGATCTCGATTCTTTCGGTAAGGATCCGAATCCGAGCCCGAGCCCGAACCCGAACCCGAACCCGAGCCGGACCTCCTCCTCCTCTTCCCACCGAAGCTTCTACTACAACAAACCAGACACCGCCCGTAAGGGCTTGCTCTCTTCCTCCTCGTCGGCGTCTTCTCTGGCGGCGGCGGCGAGGTCTTACGACCGGGATAGGGGAGACGACGATCGCGAGTTGGCGGCCGCCGGCGGAGGGTCGAGGATGGTGAGGAAGAGGCCGGCGGACCTTGACGGAGGGTTTGATCGGAGGAAGGGGATGGATCGGTATAACAGAGACGGCGGCGGCGGAGGGTACGATCGTAATTTGATGCACCGGTCGGAGAGCTTCTGCGGCGGCGGGTCGAGGAGCAGGGCGTCGGAGTTTCCGAAAGGGTTCCGATCGGAGAGGGACCGGTCGCGGCGGGAAGGGAGCAGCGCGCTGTCGTGGCGGCGGTTCGGGAAGGAGTTTGAGGAAGGAGGGAGGAGTAGTGGTAGTAGTAGGTTGGAGGAGAGAGGGAAAGGAGGTGGAGGGTTTACTATCCGGTCGCCGTCGTGGTCGAATTCGAGGGATTCCGGCAGCGAGCAATCTAGGGTTAGGTCTCCGCCGAGGAGATTTAAAGACGGGAAATCGTCGAAATCGAAATCAAAGTCTAGGTCGCCGACTTGGTCCAAAGATTCTGTTGGGAGTGAGCGATCCAAGAGTGTTGAGGTGAAGAAGAGTGAGCCTGAGACCGAGCCGGAGACGGAGCCCGAACCTGAGAGGGAGCCCGAGCCCGAGCCCGAACCTCAGCCTGAGCCCGAGCCCGAGCCGGAACCTATGCCAGAGCCTGAGGCCGAGGCTGTGGAGGAGGAGGTTCAGGGTGAGAGTGGAAGTAGGACTAGTAGTGAAATGGAGGAAGGAGAGCTTGAGCCCGAAGCCGAACCGGAAGGTGGGGATGGAGGTGAAGAGCCGGAGGTGGTGCCTGAAGGTGGAGCTGAAATGGAAGAAGGCCGAGTTCAGATTGGGAGCGAAACGGAGACTACGGTTAGGGAGGAGAGAGATGGGTGCTTAGATAAAGAAGAGGTGAAAGAGGGAGTATGTGAGGGGAAAGAAGAGGAAAAGAAAGAAGATGAGTTGCCTTCGGTTGATGAGACCAGAAATGTAGGGGGGCAGGAAGACGGGTTCGGTGGAAAAGAATTTGCGAGGGAAGAAGGGAATGAGTGCAAGGAGGAAGTGAGCAAGGAAGTGGTTTCGGAGAGGTCGTTGGAAGTGGACGAGGAGCCAAAGCAAGACAAGGGGATAGACCTTGAAGTGAAGGCTGAGGATGATGAAATGACAGAGTCTGATAGGGAAGTGACAGAAGAGGACACTGGAGTTCATACACTGAATCTGAGTGCAGATTTGACTCGGAATTTCAAGGACAAAGGGAAAAGCGTGGCCCATGTGGAGGATTCAGCAGAAAATAGTGGATGGGCTGAGAGAGAATCCAGAGAACTACTAACTTGCATGGACAATGATATGGAAGGACCGAGCACTAGGGGTTTCGAGTTGTTTACATCCTCTCCTGTTAGGAGGCAGGAGAAAGCTGATTCTGGTGTTAATATGAAAGATGAGAAGTTGGTACTTGAGCCGCTTGACCTTTCACTAAGCTTGCCTAATGTTTTGTTACCTATTGGTGCCACTCCTGGTTCTCCTGATCAAGCAATGAGTGTTCAGTCTTTAACTAACACTTTCTGTACCAACTCGGATGGATTTACTCAATCAGTATCTTTTTCAGGTTCTCAGTCGTTTTATCACAATCCTAGCTGTTCACTAACAACCCAGAATTCGATGGACTTTGAGCAATCTGTTAAAAGTCGTCCCCTTTTCCAGGGAATTGATTGGCAGGCGCTAGCTCAGAATGAGGCTAAGAATAAGGAGGTTCCATTTTATCAAAAAACCTTGATGACTGGCAATGGTTCTCATCCACAGTCCGGCGTTACAAATGGTCAATCTGTGCAAGGGCAACAAGTTAAACATTCGGAAGGAAGCTCTAAAGCAGCAAATGGATTTGAAAGGCAGCTAAGCTTCCATAAGCAGTTGTCAGGAGGGCACCCAAAGCACCATGAGGATGTTAGGTCACCTTCGCATAGTGTTGGATCTCAAGAAATGGGATCAAATTATAGTTTTGACAGGAAACGACTAATGAGAGAGAGAAGTAGTGGTAGTTTATATAGGACTAGCAGCCAGAAGGAAAAAGAGCAGTTGCTCATCGGTGGGGCTGATTTTGTTGAGACAATCATTGCCAGGATAGTATCTGATCCAGTCCATGTAATGGCCAAGAAATTTCATGAAATGACAGGACAATCTGCAGCATGTATGAAGGAGAGCATTCGCGAGATTATGTTAAATGTGGATAAGCGCATGCAACTATTTGCATTTCAGAAGGCACTGCAGAACAGGTCTGACATAACCTTGGAGATGCTACTAAAAGCCCATCGGGCACAATTGGAAATATTGGTTGCTCTCAAGACTGGTCTACCAGATTTTCTTCAGCAAGAGAGCAGTGTGTCATCTTCTGATTTGGCTGAGATTTTTCTGTACTTGAGATGCAGAAATCCTTCTTGTCGGACTCCTGTGCCTGCGGATGAATGTGATTGCAAGGTCTGTTCGCAAAAGAATGGATTTTGCAGCGCTTGTATGTGTCTTGTGTGCTCAAAGTTTGATATGGCCTCAAATACATGTAGTTGGATTGGGTGTGATGTTTGTCTTCATTGGTGCCATGCTGATTGTGCATTGCGGGAATCTTATATTAGAAATGGACGCAGTGCAACTGGATCGCAAGGGACGACTGAGATGCAATTTCATTGTGTTGCTTGTGATCATCCTTCTGAGATGTTTGGCTTTGTGAAGGAGGTTTTTCAGCATTTTGCCAAGGATTGGACGATTGAAAATCTTGCCAGGGAACTTGAATATGTTAAGAGAATTTTCCTTGTCAGCAAGGACATGAGAGGGAGACGGCTGTATGAAATTGCTGATCAATCGCTCATTAGATTGGCTAATAAGTCTGGCCTTCCAGAGGTTTACAGTTACATAATGGCTTTTCTTGAGGATACTGACAGTTCCAAGTTGGGCAAAACTCCCATTTTACCTGGGAAGGATCAAGGTAAAGGAAGCAGTGGTATTGCTGGGCCAAGCCAGGAGCCAGCATGGCTGAAGTCTGTATATACAGAAAAGGCCCCTCAGTTGGAGTCTGCTCCTAGCGTTCTTCCTAGCTACAACTATGAGCAGCACGATAAACGCATTATGGAGTCAGAGTTGCACATGAGTTCTCAAAAAGAACCTGTTTTCGATGAGTTGGAGAGTATTGTGAGGATCAAGCAGGCCGAGGCTAAAATGTTCCAAACACGTGCGGACGAAGCAAGAAAAGAAGCTGAGGGGCTGAAACGCATAGCACTGGCAAAGAATGAGAAAATTGAAGAAGAATATAGGAATAGAATAACAAAACTCCGTTTTGTTGAAGCTGAGGAAATGCGGAAACAGAAACTTGAGGAACTGCAGTCTCTAGATCGAGCTCATCGAGAATATTCCAATATGAAGATGAGGATGGAAGCGGATATTAAAGATCTTTTATTAAAAATGGAAGCAACAAAGCGAAACTTTTCCTTGTGA

Protein Analysis

1225

Amino Acids

136.65

Weight (kDa)

5.23

Isoelectric Point (pI)

66.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_Oberon PF07227 872 - 995 1.1e-38 PHD - plant homeodomain finger protein
Oberon_cc PF16312 1087 - 1212 9.3e-44 Coiled-coil region of Oberon
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 1003, 1700, 2115, 2781
AccB7I CCANNNNNTGG 2 cut(s) 2338, 2943
AccI GTMKAC 1 cut(s) 2542
AccII CGCG 4 cut(s) 237, 463, 482, 2400
AcoI YGGCCR 2 cut(s) 246, 2340
AcsI RAATTY 6 cut(s) 604, 1220, 1435, 1849, 2348, 2988
AcuI CTGAAG 3 cut(s) 1029, 2540, 3239
AcvI CACGTG 1 cut(s) 3413
AcyI GRCGYC 2 cut(s) 179, 419
AfaI GTAC 4 cut(s) 359, 1647, 1762, 2606
AfeI AGCGCT 1 cut(s) 2698
AflIII ACRYGT 2 cut(s) 2744, 3410
AgeI ACCGGT 2 cut(s) 378, 456
AgsI TTSAA 7 cut(s) 1334, 1441, 2078, 2954, 2975, 3482, 3524
AhlI ACTAGT 1 cut(s) 923
AjnI CCWGG 6 cut(s) 1708, 1893, 2309, 2963, 3154, 3201
AloI GAACNNNNNNTCC 2 cut(s) 1190, 1222
Alw21I GWGCWC 3 cut(s) 1559, 2720, 3580
AlwNI CAGNNNCTG 2 cut(s) 872, 1367
Ama87I CYCGRG 6 cut(s) 61, 85, 812, 818, 842, 848
Aor51HI AGCGCT 1 cut(s) 2698
ApeKI GCWGC 8 cut(s) 477, 621, 2063, 2083, 2247, 2375, 2694, 3292
ApoI RAATTY 6 cut(s) 604, 1220, 1435, 1849, 2348, 2988
ArsI GACNNNNNNTTYG 6 cut(s) 287, 319, 677, 683, 709, 715
AsiGI ACCGGT 2 cut(s) 378, 456
Asp700I GAANNNNTTC 3 cut(s) 437, 2623, 3664
AspLEI GCGC 5 cut(s) 482, 484, 1915, 2427, 2699
AspS9I GGNCC 8 cut(s) 93, 289, 454, 711, 1462, 1550, 3194, 3241
AsuC2I CCSGG 1 cut(s) 215
AsuHPI GGTGA 6 cut(s) 283, 766, 917, 998, 1120, 2136
AsuNHI GCTAGC 1 cut(s) 1915
AvaI CYCGRG 6 cut(s) 61, 85, 812, 818, 842, 848
AvaII GGWCC 5 cut(s) 93, 289, 454, 711, 1550
AxyI CCTNAGG 1 cut(s) 873
BaeGI GKGCMC 2 cut(s) 2118, 2509
BaeI ACNNNNGTAYC 2 cut(s) 349, 382
BalI TGGCCA 1 cut(s) 2342
BamHI GGATCC 1 cut(s) 46
BanI GGYRCC 4 cut(s) 1003, 1700, 2115, 2781
BbrPI CACGTG 1 cut(s) 3413
BbsI GAAGAC 3 cut(s) 174, 1206, 2765
Bbv12I GWGCWC 3 cut(s) 1559, 2720, 3580
BbvCI CCTCAGC 4 cut(s) 831, 1344, 3438, 3528
BbvI GCAGC 8 cut(s) 489, 633, 2075, 2095, 2259, 2387, 2706, 3304
BccI CCATC 9 cut(s) 262, 316, 974, 1079, 1488, 1766, 1849, 2508, 3604
BceAI ACGGC 3 cut(s) 358, 577, 3038
BcgI CGANNNNNNTGC 4 cut(s) 2823, 2842, 2857, 2876
BciT130I CCWGG 6 cut(s) 1710, 1895, 2311, 2965, 3156, 3203
BciVI GTATCC 1 cut(s) 3109
BclI TGATCA 3 cut(s) 1720, 2884, 3040
BcnI CCSGG 1 cut(s) 215
BcuI ACTAGT 1 cut(s) 923
BfmI CTRYAG 3 cut(s) 2373, 2456, 3560
BfoI RGCGCY 2 cut(s) 1916, 2700
BfuI GTATCC 1 cut(s) 3109
BglI GCCNNNNNGGC 2 cut(s) 2504, 3214
BglII AGATCT 1 cut(s) 3628
BlpI GCTNAGC 1 cut(s) 2087
Bme1390I CCNGG 7 cut(s) 215, 1710, 1895, 2311, 2965, 3156, 3203
Bme18I GGWCC 5 cut(s) 93, 289, 454, 711, 1550
BmeT110I CYCGRG 6 cut(s) 61, 85, 812, 818, 842, 848
BmgT120I GGNCC 8 cut(s) 93, 289, 454, 711, 1462, 1550, 3194, 3241
BmrFI CCNGG 7 cut(s) 215, 1710, 1895, 2311, 2965, 3156, 3203
BmsI GCATC 4 cut(s) 363, 2475, 2603, 2850
BmtI GCTAGC 1 cut(s) 1919
BpiI GAAGAC 3 cut(s) 174, 1206, 2765
BpmI CTGGAG 1 cut(s) 1416
Bpu10I CCTNAGC 5 cut(s) 831, 837, 1344, 3438, 3528
Bpu1102I GCTNAGC 1 cut(s) 2087
BpuEI CTTGAG 7 cut(s) 971, 1670, 2151, 2516, 2629, 3131, 3572
BpuMI CCSGG 1 cut(s) 215
BsaAI YACGTR 1 cut(s) 3413
BsaBI GATNNNNATC 1 cut(s) 51
BsaHI GRCGYC 2 cut(s) 179, 419
BsaI GGTCTC 3 cut(s) 648, 767, 1169
BsaJI CCNNGG 8 cut(s) 650, 879, 1894, 2478, 2937, 2964, 3155, 3390
BsaWI WCCGGW 4 cut(s) 378, 456, 585, 967
Bse118I RCCGGY 4 cut(s) 251, 283, 378, 456
Bse1I ACTGG 6 cut(s) 1399, 1978, 2327, 2542, 2842, 3465
Bse21I CCTNAGG 1 cut(s) 873
Bse3DI GCAATG 4 cut(s) 1734, 1984, 2304, 2798
Bse8I GATNNNNATC 1 cut(s) 51
BseBI CCWGG 6 cut(s) 1710, 1895, 2311, 2965, 3156, 3203
BseDI CCNNGG 8 cut(s) 650, 879, 1894, 2478, 2937, 2964, 3155, 3390
BseJI GATNNNNATC 1 cut(s) 51
BseMI GCAATG 4 cut(s) 1734, 1984, 2304, 2798
BseNI ACTGG 6 cut(s) 1399, 1978, 2327, 2542, 2842, 3465
BsePI GCGCGC 1 cut(s) 480
BseSI GKGCMC 2 cut(s) 2118, 2509
BseX3I CGGCCG 1 cut(s) 246
BseXI GCAGC 8 cut(s) 489, 633, 2075, 2095, 2259, 2387, 2706, 3304
BseYI CCCAGC 1 cut(s) 3191
BsgI GTGCAG 1 cut(s) 1440
Bsh1236I CGCG 4 cut(s) 237, 463, 482, 2400
Bsh1285I CGRYCG 8 cut(s) 214, 235, 249, 364, 383, 446, 461, 590
BshNI GGYRCC 4 cut(s) 1003, 1700, 2115, 2781
BshTI ACCGGT 2 cut(s) 378, 456
BsiEI CGRYCG 8 cut(s) 214, 235, 249, 364, 383, 446, 461, 590
BsiHKAI GWGCWC 3 cut(s) 1559, 2720, 3580
BsiHKCI CYCGRG 6 cut(s) 61, 85, 812, 818, 842, 848
BslFI GGGAC 3 cut(s) 467, 1869, 2863
BsmBI CGTCTC 4 cut(s) 219, 333, 779, 3013
BsmFI GGGAC 3 cut(s) 467, 1869, 2863
BsmI GAATGC 1 cut(s) 2394
Bso31I GGTCTC 3 cut(s) 648, 767, 1169
BsoBI CYCGRG 6 cut(s) 61, 85, 812, 818, 842, 848
Bsp1720I GCTNAGC 1 cut(s) 2087
Bsp68I TCGCGA 2 cut(s) 237, 2400
BspFNI CGCG 4 cut(s) 237, 463, 482, 2400
BspHI TCATGA 1 cut(s) 2353
BspMAI CTGCAG 3 cut(s) 2377, 2460, 3564
BspOI GCTAGC 1 cut(s) 1919
BspQI GCTCTTC 1 cut(s) 984
BspT107I GGYRCC 4 cut(s) 1003, 1700, 2115, 2781
BspTNI GGTCTC 3 cut(s) 648, 767, 1169
BsrDI GCAATG 4 cut(s) 1734, 1984, 2304, 2798
BsrFI RCCGGY 4 cut(s) 251, 283, 378, 456
BsrI ACTGG 6 cut(s) 1399, 1978, 2327, 2542, 2842, 3465
BssAI RCCGGY 4 cut(s) 251, 283, 378, 456
BssECI CCNNGG 8 cut(s) 650, 879, 1894, 2478, 2937, 2964, 3155, 3390
BssHII GCGCGC 1 cut(s) 480
BssNI GRCGYC 2 cut(s) 179, 419
BssT1I CCWWGG 2 cut(s) 2478, 2937
Bst2UI CCWGG 6 cut(s) 1710, 1895, 2311, 2965, 3156, 3203
Bst4CI ACNGT 4 cut(s) 1069, 1995, 3092, 3125
Bst6I CTCTTC 8 cut(s) 112, 169, 272, 755, 984, 1098, 1131, 1380
BstACI GRCGYC 2 cut(s) 179, 419
BstBAI YACGTR 1 cut(s) 3413
BstEII GGTNACC 1 cut(s) 2142
BstENI CCTNNNNNAGG 2 cut(s) 1892, 3080
BstFNI CGCG 4 cut(s) 237, 463, 482, 2400
BstH2I RGCGCY 2 cut(s) 1916, 2700
BstHHI GCGC 5 cut(s) 482, 484, 1915, 2427, 2699
BstMCI CGRYCG 8 cut(s) 214, 235, 249, 364, 383, 446, 461, 590
BstMWI GCNNNNNNNGC 8 cut(s) 197, 396, 490, 2122, 2504, 2795, 3214, 3422
BstNI CCWGG 6 cut(s) 1710, 1895, 2311, 2965, 3156, 3203
BstNSI RCATGY 3 cut(s) 2382, 2431, 2748
BstPI GGTNACC 1 cut(s) 2142
BstSCI CCNGG 7 cut(s) 213, 1708, 1893, 2309, 2963, 3154, 3201
BstSFI CTRYAG 3 cut(s) 2373, 2456, 3560
BstSLI GKGCMC 2 cut(s) 2118, 2509
BstUI CGCG 4 cut(s) 237, 463, 482, 2400
BstV1I GCAGC 8 cut(s) 489, 633, 2075, 2095, 2259, 2387, 2706, 3304
BstV2I GAAGAC 3 cut(s) 174, 1206, 2765
BstX2I RGATCY 5 cut(s) 14, 25, 46, 2162, 3628
BstYI RGATCY 5 cut(s) 14, 25, 46, 2162, 3628
BstZI CGGCCG 1 cut(s) 246
Bsu36I CCTNAGG 1 cut(s) 873
BsuI GTATCC 1 cut(s) 3109
BtsI GCAGTG 4 cut(s) 2453, 2575, 2836, 3187
BtsIMutI CAGTG 7 cut(s) 1392, 1406, 2453, 2575, 2836, 3187, 3458
BtuMI TCGCGA 2 cut(s) 237, 2400
CaiI CAGNNNCTG 2 cut(s) 872, 1367
CciI TCATGA 1 cut(s) 2353
CciNI GCGGCCGC 1 cut(s) 246
CfoI GCGC 5 cut(s) 482, 484, 1915, 2427, 2699
Cfr10I RCCGGY 4 cut(s) 251, 283, 378, 456
Cfr13I GGNCC 8 cut(s) 93, 289, 454, 711, 1462, 1550, 3194, 3241
CseI GACGC 3 cut(s) 168, 408, 2835
Csp6I GTAC 4 cut(s) 358, 1646, 1761, 2605
CspAI ACCGGT 2 cut(s) 378, 456
CviQI GTAC 4 cut(s) 358, 1646, 1761, 2605
DraI TTTAAA 1 cut(s) 661
EaeI YGGCCR 2 cut(s) 246, 2340
EagI CGGCCG 1 cut(s) 246
Eam1104I CTCTTC 8 cut(s) 112, 169, 272, 755, 984, 1098, 1131, 1380
EarI CTCTTC 8 cut(s) 112, 169, 272, 755, 984, 1098, 1131, 1380
EciI GGCGGA 4 cut(s) 270, 302, 366, 636
Ecl136II GAGCTC 1 cut(s) 3578
EclXI CGGCCG 1 cut(s) 246
Eco130I CCWWGG 2 cut(s) 2478, 2937
Eco31I GGTCTC 3 cut(s) 648, 767, 1169
Eco47I GGWCC 5 cut(s) 93, 289, 454, 711, 1550
Eco47III AGCGCT 1 cut(s) 2698
Eco52I CGGCCG 1 cut(s) 246
Eco53kI GAGCTC 1 cut(s) 3578
Eco57I CTGAAG 3 cut(s) 1029, 2540, 3239
Eco72I CACGTG 1 cut(s) 3413
Eco81I CCTNAGG 1 cut(s) 873
Eco88I CYCGRG 6 cut(s) 61, 85, 812, 818, 842, 848
Eco91I GGTNACC 1 cut(s) 2142
EcoICRI GAGCTC 1 cut(s) 3578
EcoNI CCTNNNNNAGG 2 cut(s) 1892, 3080
EcoO109I RGGNCCY 1 cut(s) 3241
EcoO65I GGTNACC 1 cut(s) 2142
EcoRI GAATTC 2 cut(s) 604, 1849
EcoRII CCWGG 6 cut(s) 1708, 1893, 2309, 2963, 3154, 3201
EcoT14I CCWWGG 2 cut(s) 2478, 2937
ErhI CCWWGG 2 cut(s) 2478, 2937
Esp3I CGTCTC 4 cut(s) 219, 333, 779, 3013
FalI AAGNNNNNCTT 3 cut(s) 933, 965, 3647
FaqI GGGAC 3 cut(s) 467, 1869, 2863
FauI CCCGC 3 cut(s) 395, 459, 2796
FbaI TGATCA 3 cut(s) 1720, 2884, 3040
FblI GTMKAC 1 cut(s) 2542
GlaI GCGC 5 cut(s) 481, 483, 1914, 2426, 2698
GsaI CCCAGC 1 cut(s) 3195
GsuI CTGGAG 1 cut(s) 1416
HaeII RGCGCY 2 cut(s) 1916, 2700
HgaI GACGC 3 cut(s) 168, 408, 2835
HhaI GCGC 5 cut(s) 482, 484, 1915, 2427, 2699
Hin1I GRCGYC 2 cut(s) 179, 419
Hin6I GCGC 5 cut(s) 480, 482, 1913, 2425, 2697
HinP1I GCGC 5 cut(s) 480, 482, 1913, 2425, 2697
HindIII AAGCTT 3 cut(s) 118, 1672, 2089
HphI GGTGA 6 cut(s) 283, 766, 917, 998, 1120, 2136
Hpy166II GTNNAC 6 cut(s) 579, 1297, 1578, 1835, 2543, 3088
Hpy8I GTNNAC 6 cut(s) 579, 1297, 1578, 1835, 2543, 3088
Hpy99I CGWCG 5 cut(s) 178, 233, 424, 598, 679
HpyCH4III ACNGT 4 cut(s) 1069, 1995, 3092, 3125
HpyCH4IV ACGT 1 cut(s) 3412
HpyF10VI GCNNNNNNNGC 8 cut(s) 197, 396, 490, 2122, 2504, 2795, 3214, 3422
HpySE526I ACGT 1 cut(s) 3412
Hsp92I GRCGYC 2 cut(s) 179, 419
HspAI GCGC 5 cut(s) 480, 482, 1913, 2425, 2697
KroI GCCGGC 2 cut(s) 251, 283
KroNI GCCGGC 2 cut(s) 253, 285
Ksp22I TGATCA 3 cut(s) 1720, 2884, 3040
LguI GCTCTTC 1 cut(s) 984
LmnI GCTCC 9 cut(s) 411, 474, 790, 808, 1016, 1050, 1303, 3205, 3265
Lsp1109I GCAGC 8 cut(s) 489, 633, 2075, 2095, 2259, 2387, 2706, 3304
LweI GCATC 4 cut(s) 363, 2475, 2603, 2850
MaeII ACGT 1 cut(s) 3412
MaeIII GTNAC 5 cut(s) 1378, 1689, 2002, 2142, 3092
MfeI CAATTG 1 cut(s) 2510
MflI RGATCY 5 cut(s) 14, 25, 46, 2162, 3628
MlsI TGGCCA 1 cut(s) 2342
MluNI TGGCCA 1 cut(s) 2342
MlyI GAGTC 5 cut(s) 1373, 1423, 2629, 3263, 3323
MmeI TCCRAC 9 cut(s) 363, 402, 528, 1269, 2140, 2612, 2732, 3231, 3342
Mox20I TGGCCA 1 cut(s) 2342
MreI CGCCGGCG 1 cut(s) 251
MroNI GCCGGC 2 cut(s) 251, 283
MroXI GAANNNNTTC 3 cut(s) 437, 2623, 3664
MscI TGGCCA 1 cut(s) 2342
MseI TTAA 9 cut(s) 660, 1623, 1745, 1875, 2037, 2411, 2982, 3624, 3638
MslI CAYNNNNRTG 1 cut(s) 2133
Msp20I TGGCCA 1 cut(s) 2342
MspR9I CCNGG 7 cut(s) 215, 1710, 1895, 2311, 2965, 3156, 3203
MunI CAATTG 1 cut(s) 2510
Mva1269I GAATGC 1 cut(s) 2394
MvaI CCWGG 6 cut(s) 1710, 1895, 2311, 2965, 3156, 3203
MvnI CGCG 4 cut(s) 237, 463, 482, 2400
MwoI GCNNNNNNNGC 8 cut(s) 197, 396, 490, 2122, 2504, 2795, 3214, 3422
NaeI GCCGGC 2 cut(s) 253, 285
NciI CCSGG 1 cut(s) 215
NgoMIV GCCGGC 2 cut(s) 251, 283
NheI GCTAGC 1 cut(s) 1915
NmeAIII GCCGAG 4 cut(s) 675, 904, 1061, 3415
NmuCI GTSAC 2 cut(s) 1378, 2142
NotI GCGGCCGC 1 cut(s) 246
NruI TCGCGA 2 cut(s) 237, 2400
NspI RCATGY 3 cut(s) 2382, 2431, 2748
PaeI GCATGC 1 cut(s) 2431
PagI TCATGA 1 cut(s) 2353
PauI GCGCGC 1 cut(s) 480
PciI ACATGT 1 cut(s) 2744
PciSI GCTCTTC 1 cut(s) 984
PcsI WCGNNNNNNNCGW 6 cut(s) 234, 428, 680, 1283, 2849, 3580
PctI GAATGC 1 cut(s) 2394
PdiI GCCGGC 2 cut(s) 253, 285
PdmI GAANNNNTTC 3 cut(s) 437, 2623, 3664
PfeI GAWTC 9 cut(s) 32, 52, 614, 719, 1411, 1475, 1508, 1613, 2807
PflFI GACNNNGTC 2 cut(s) 709, 1363
PflMI CCANNNNNTGG 2 cut(s) 2338, 2943
PinAI ACCGGT 2 cut(s) 378, 456
Ple19I CGATCG 3 cut(s) 235, 364, 446
PleI GAGTC 5 cut(s) 1372, 1423, 2629, 3262, 3322
PmaCI CACGTG 1 cut(s) 3413
PmlI CACGTG 1 cut(s) 3413
PpsI GAGTC 5 cut(s) 1372, 1423, 2629, 3262, 3322
Ppu21I YACGTR 1 cut(s) 3413
PscI ACATGT 1 cut(s) 2744
Psp124BI GAGCTC 1 cut(s) 3580
Psp6I CCWGG 6 cut(s) 1708, 1893, 2309, 2963, 3154, 3201
PspCI CACGTG 1 cut(s) 3413
PspEI GGTNACC 1 cut(s) 2142
PspFI CCCAGC 1 cut(s) 3191
PspGI CCWGG 6 cut(s) 1708, 1893, 2309, 2963, 3154, 3201
PspPI GGNCC 8 cut(s) 93, 289, 454, 711, 1462, 1550, 3194, 3241
PstI CTGCAG 3 cut(s) 2377, 2460, 3564
PstNI CAGNNNCTG 2 cut(s) 872, 1367
PsuI RGATCY 5 cut(s) 14, 25, 46, 2162, 3628
PsyI GACNNNGTC 2 cut(s) 709, 1363
PteI GCGCGC 1 cut(s) 480
PvuI CGATCG 3 cut(s) 235, 364, 446
RruI TCGCGA 2 cut(s) 237, 2400
RsaI GTAC 4 cut(s) 359, 1647, 1762, 2606
RsaNI GTAC 4 cut(s) 358, 1646, 1761, 2605
RseI CAYNNNNRTG 1 cut(s) 2133
SacI GAGCTC 1 cut(s) 3580
SapI GCTCTTC 1 cut(s) 984
SaqAI TTAA 9 cut(s) 660, 1623, 1745, 1875, 2037, 2411, 2982, 3624, 3638
Sau96I GGNCC 8 cut(s) 93, 289, 454, 711, 1462, 1550, 3194, 3241
SchI GAGTC 5 cut(s) 1373, 1423, 2629, 3263, 3323
ScrFI CCNGG 7 cut(s) 215, 1710, 1895, 2311, 2965, 3156, 3203
SfaNI GCATC 4 cut(s) 363, 2475, 2603, 2850
SfcI CTRYAG 3 cut(s) 2373, 2456, 3560
SgrAI CRCCGGYG 1 cut(s) 251
SinI GGWCC 5 cut(s) 93, 289, 454, 711, 1550
SmiMI CAYNNNNRTG 1 cut(s) 2133
SmlI CTYRAG 7 cut(s) 950, 1649, 2166, 2531, 2608, 3110, 3551
SmoI CTYRAG 7 cut(s) 950, 1649, 2166, 2531, 2608, 3110, 3551
SpeI ACTAGT 1 cut(s) 923
SphI GCATGC 1 cut(s) 2431
SspI AATATT 2 cut(s) 2520, 3590
SstI GAGCTC 1 cut(s) 3580
StyD4I CCNGG 7 cut(s) 213, 1708, 1893, 2309, 2963, 3154, 3201
StyI CCWWGG 2 cut(s) 2478, 2937
TaaI ACNGT 4 cut(s) 1069, 1995, 3092, 3125
TaiI ACGT 1 cut(s) 3415
TaqII GACCGA 2 cut(s) 791, 1567
TatI WGTACW 1 cut(s) 2604
TfiI GAWTC 9 cut(s) 32, 52, 614, 719, 1411, 1475, 1508, 1613, 2807
Tru1I TTAA 9 cut(s) 660, 1623, 1745, 1875, 2037, 2411, 2982, 3624, 3638
Tru9I TTAA 9 cut(s) 660, 1623, 1745, 1875, 2037, 2411, 2982, 3624, 3638
TscAI CASTG 7 cut(s) 1399, 1413, 2460, 2575, 2836, 3187, 3465
TseFI GTSAC 2 cut(s) 1378, 2142
TseI GCWGC 8 cut(s) 477, 621, 2063, 2083, 2247, 2375, 2694, 3292
Tsp45I GTSAC 2 cut(s) 1378, 2142
TspGWI ACGGA 4 cut(s) 312, 803, 1073, 3503
TspRI CASTG 7 cut(s) 1399, 1413, 2460, 2575, 2836, 3187, 3465
Tth111I GACNNNGTC 2 cut(s) 709, 1363
Van91I CCANNNNNTGG 2 cut(s) 2338, 2943
VpaK11BI GGWCC 5 cut(s) 93, 289, 454, 711, 1550
XagI CCTNNNNNAGG 2 cut(s) 1892, 3080
XapI RAATTY 6 cut(s) 604, 1220, 1435, 1849, 2348, 2988
XbaI TCTAGA 1 cut(s) 3568
XceI RCATGY 3 cut(s) 2382, 2431, 2748
XmiI GTMKAC 1 cut(s) 2542
XmnI GAANNNNTTC 3 cut(s) 437, 2623, 3664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.