Coiled-coil region of Oberon
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63500 AT3G63500 AT3G63500 |
| fragaria_vesca | FvH4_7g01270 FvH4_7g01270 FvH4_7g01270 |
| malus_domestica | MD02G1308100.v1.1 MD07G1017600.v1.1 |
| prunus_persica | Prupe.2G017300_v2.0.a1 Prupe.2G017300_v2.0.a1 |
| pyrus_communis | pycom02g25950 pycom03g08770 pycom07g01340 |
| rosa_chinensis | RchiOBHm_Chr1g0317021 |
| rosa_laevigata | RLG00000030632 |
| rosa_multiflora | Rmu_sc0006455.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00330730 |
| rosa_rugosa | Rorug01G0013900 |
| rosa_samantha | Rh1AG025000 Rh1BG021800 Rh1CG023400 Rh1DG022200 |
| rosa_wichuraiana | Rw1G001730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 216 |
| AciI | CCGC | 1 cut(s) | 222 |
| AcsI | RAATTY | 1 cut(s) | 79 |
| AcvI | CACGTG | 1 cut(s) | 68 |
| AfaI | GTAC | 1 cut(s) | 320 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 163, 363 |
| AjiI | CACGTC | 2 cut(s) | 46, 360 |
| AjnI | CCWGG | 1 cut(s) | 415 |
| AleI | CACNNNNGTG | 1 cut(s) | 59 |
| AluBI | AGCT | 1 cut(s) | 351 |
| AluI | AGCT | 1 cut(s) | 351 |
| ApeKI | GCWGC | 1 cut(s) | 72 |
| ApoI | RAATTY | 1 cut(s) | 79 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 469 |
| AspS9I | GGNCC | 4 cut(s) | 29, 228, 288, 413 |
| AsuHPI | GGTGA | 1 cut(s) | 363 |
| AsuII | TTCGAA | 1 cut(s) | 385 |
| AvaII | GGWCC | 4 cut(s) | 29, 228, 288, 413 |
| BbrPI | CACGTG | 1 cut(s) | 68 |
| BbvI | GCAGC | 1 cut(s) | 59 |
| BccI | CCATC | 4 cut(s) | 104, 138, 143, 302 |
| BciT130I | CCWGG | 1 cut(s) | 417 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BfuAI | ACCTGC | 1 cut(s) | 216 |
| BisI | GCNGC | 2 cut(s) | 73, 223 |
| BlsI | GCNGC | 2 cut(s) | 74, 224 |
| Bme1390I | CCNGG | 1 cut(s) | 417 |
| Bme18I | GGWCC | 4 cut(s) | 29, 228, 288, 413 |
| BmgBI | CACGTC | 2 cut(s) | 46, 360 |
| BmgT120I | GGNCC | 4 cut(s) | 29, 228, 288, 413 |
| BmiI | GGNNCC | 2 cut(s) | 207, 289 |
| BmrFI | CCNGG | 1 cut(s) | 417 |
| BmsI | GCATC | 2 cut(s) | 13, 324 |
| Bpu14I | TTCGAA | 1 cut(s) | 385 |
| BsaAI | YACGTR | 1 cut(s) | 68 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 411, 441 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 163, 363 |
| BseBI | CCWGG | 1 cut(s) | 417 |
| BseGI | GGATG | 3 cut(s) | 20, 130, 135 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 163, 363 |
| BseRI | GAGGAG | 1 cut(s) | 379 |
| BseXI | GCAGC | 1 cut(s) | 59 |
| BslFI | GGGAC | 1 cut(s) | 301 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 163, 363 |
| BsmFI | GGGAC | 1 cut(s) | 301 |
| Bsp119I | TTCGAA | 1 cut(s) | 385 |
| Bsp143I | GATC | 2 cut(s) | 199, 292 |
| BspACI | CCGC | 1 cut(s) | 222 |
| BspLI | GGNNCC | 2 cut(s) | 207, 289 |
| BspMI | ACCTGC | 1 cut(s) | 216 |
| BspT104I | TTCGAA | 1 cut(s) | 385 |
| BssMI | GATC | 2 cut(s) | 199, 292 |
| Bst2UI | CCWGG | 1 cut(s) | 417 |
| Bst6I | CTCTTC | 2 cut(s) | 125, 239 |
| BstBAI | YACGTR | 1 cut(s) | 68 |
| BstBI | TTCGAA | 1 cut(s) | 385 |
| BstC8I | GCNNGC | 1 cut(s) | 187 |
| BstEII | GGTNACC | 1 cut(s) | 369 |
| BstF5I | GGATG | 3 cut(s) | 20, 130, 135 |
| BstKTI | GATC | 2 cut(s) | 202, 295 |
| BstMBI | GATC | 2 cut(s) | 199, 292 |
| BstNI | CCWGG | 1 cut(s) | 417 |
| BstPI | GGTNACC | 1 cut(s) | 369 |
| BstSCI | CCNGG | 1 cut(s) | 415 |
| BstV1I | GCAGC | 1 cut(s) | 59 |
| BtrI | CACGTC | 2 cut(s) | 46, 360 |
| BtsCI | GGATG | 3 cut(s) | 20, 130, 135 |
| BveI | ACCTGC | 1 cut(s) | 216 |
| Cac8I | GCNNGC | 1 cut(s) | 187 |
| Cfr13I | GGNCC | 4 cut(s) | 29, 228, 288, 413 |
| Csp6I | GTAC | 1 cut(s) | 319 |
| CviJI | RGCY | 6 cut(s) | 50, 72, 167, 185, 212, 351 |
| CviKI_1 | RGCY | 6 cut(s) | 50, 72, 167, 185, 212, 351 |
| CviQI | GTAC | 1 cut(s) | 319 |
| DpnI | GATC | 2 cut(s) | 201, 294 |
| DpnII | GATC | 2 cut(s) | 199, 292 |
| Eam1104I | CTCTTC | 2 cut(s) | 125, 239 |
| EarI | CTCTTC | 2 cut(s) | 125, 239 |
| Eco47I | GGWCC | 4 cut(s) | 29, 228, 288, 413 |
| Eco72I | CACGTG | 1 cut(s) | 68 |
| Eco91I | GGTNACC | 1 cut(s) | 369 |
| EcoO65I | GGTNACC | 1 cut(s) | 369 |
| EcoRII | CCWGG | 1 cut(s) | 415 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaiI | YATR | 2 cut(s) | 258, 327 |
| FaqI | GGGAC | 1 cut(s) | 301 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| Fnu4HI | GCNGC | 2 cut(s) | 73, 223 |
| FokI | GGATG | 3 cut(s) | 7, 117, 122 |
| Fsp4HI | GCNGC | 2 cut(s) | 73, 223 |
| GluI | GCNGC | 2 cut(s) | 73, 223 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| HphI | GGTGA | 1 cut(s) | 363 |
| Hpy166II | GTNNAC | 1 cut(s) | 43 |
| Hpy188III | TCNNGA | 5 cut(s) | 91, 203, 231, 241, 488 |
| Hpy8I | GTNNAC | 1 cut(s) | 43 |
| Hpy99I | CGWCG | 1 cut(s) | 364 |
| HpyAV | CCTTC | 7 cut(s) | 97, 115, 121, 273, 277, 418, 476 |
| HpyCH4IV | ACGT | 3 cut(s) | 45, 67, 359 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 337 |
| HpySE526I | ACGT | 3 cut(s) | 45, 67, 359 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 2 cut(s) | 199, 292 |
| LmnI | GCTCC | 3 cut(s) | 194, 402, 419 |
| Lsp1109I | GCAGC | 1 cut(s) | 59 |
| LweI | GCATC | 2 cut(s) | 13, 324 |
| MaeII | ACGT | 3 cut(s) | 45, 67, 359 |
| MaeIII | GTNAC | 2 cut(s) | 9, 369 |
| MalI | GATC | 2 cut(s) | 201, 294 |
| MboI | GATC | 2 cut(s) | 199, 292 |
| MboII | GAAGA | 5 cut(s) | 75, 91, 112, 162, 256 |
| MluCI | AATT | 4 cut(s) | 79, 214, 234, 328 |
| MnlI | CCTC | 5 cut(s) | 240, 308, 357, 360, 449 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 469 |
| MseI | TTAA | 1 cut(s) | 35 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| MspR9I | CCNGG | 1 cut(s) | 417 |
| MvaI | CCWGG | 1 cut(s) | 417 |
| NdeII | GATC | 2 cut(s) | 199, 292 |
| NlaIV | GGNNCC | 2 cut(s) | 207, 289 |
| NmeAIII | GCCGAG | 1 cut(s) | 143 |
| NmuCI | GTSAC | 1 cut(s) | 369 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspV | TTCGAA | 1 cut(s) | 385 |
| OliI | CACNNNNGTG | 1 cut(s) | 59 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 402 |
| PdmI | GAANNNNTTC | 1 cut(s) | 469 |
| PfoI | TCCNGGA | 1 cut(s) | 415 |
| PkrI | GCNGC | 2 cut(s) | 74, 224 |
| PmaCI | CACGTG | 1 cut(s) | 68 |
| PmlI | CACGTG | 1 cut(s) | 68 |
| Ppu21I | YACGTR | 1 cut(s) | 68 |
| Psp6I | CCWGG | 1 cut(s) | 415 |
| PspCI | CACGTG | 1 cut(s) | 68 |
| PspEI | GGTNACC | 1 cut(s) | 369 |
| PspGI | CCWGG | 1 cut(s) | 415 |
| PspN4I | GGNNCC | 2 cut(s) | 207, 289 |
| PspPI | GGNCC | 4 cut(s) | 29, 228, 288, 413 |
| RsaI | GTAC | 1 cut(s) | 320 |
| RsaNI | GTAC | 1 cut(s) | 319 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SaqAI | TTAA | 1 cut(s) | 35 |
| SatI | GCNGC | 2 cut(s) | 73, 223 |
| Sau3AI | GATC | 2 cut(s) | 199, 292 |
| Sau96I | GGNCC | 4 cut(s) | 29, 228, 288, 413 |
| ScrFI | CCNGG | 1 cut(s) | 417 |
| SfaNI | GCATC | 2 cut(s) | 13, 324 |
| SfuI | TTCGAA | 1 cut(s) | 385 |
| SinI | GGWCC | 4 cut(s) | 29, 228, 288, 413 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| Sse9I | AATT | 4 cut(s) | 79, 214, 234, 328 |
| SsiI | CCGC | 1 cut(s) | 222 |
| StyD4I | CCNGG | 1 cut(s) | 415 |
| TaiI | ACGT | 3 cut(s) | 48, 70, 362 |
| TaqI | TCGA | 5 cut(s) | 273, 362, 385, 396, 473 |
| TaqII | GACCGA | 1 cut(s) | 305 |
| TasI | AATT | 4 cut(s) | 79, 214, 234, 328 |
| TauI | GCSGC | 1 cut(s) | 225 |
| Tru1I | TTAA | 1 cut(s) | 35 |
| Tru9I | TTAA | 1 cut(s) | 35 |
| TseFI | GTSAC | 1 cut(s) | 369 |
| TseI | GCWGC | 1 cut(s) | 72 |
| Tsp45I | GTSAC | 1 cut(s) | 369 |
| TspDTI | ATGAA | 1 cut(s) | 112 |
| TspGWI | ACGGA | 1 cut(s) | 21 |
| VpaK11BI | GGWCC | 4 cut(s) | 29, 228, 288, 413 |
| XapI | RAATTY | 1 cut(s) | 79 |
| XmnI | GAANNNNTTC | 1 cut(s) | 469 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |