Heat Stress Transcription Factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03720 AT5G03720 |
| fragaria_vesca | FvH4_6g17890 |
| malus_domestica | MD12G1017900.v1.1 MD14G1015900.v1.1 |
| prunus_persica | Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 |
| pyrus_communis | pycom03g05130 pycom12g01490 pycom14g01370 |
| rosa_chinensis | RchiOBHm_Chr3g0472131 RchiOBHm_Chr3g0472141 |
| rosa_laevigata | RLG00000024102 |
| rosa_multiflora | Rmu_sc0002532.1_g000026 |
| rosa_roxburghii | Rroxscaffold_6G00409220 |
| rosa_rugosa | Rorug03G0122500 Rorug03G0122600 |
| rosa_samantha | Rh3AG174300 Rh3BG199700 Rh3CG190800 Rh3CG198200 Rh3DG174800 |
| rosa_wichuraiana | Rw3G016650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 237, 260, 263 |
| AcsI | RAATTY | 1 cut(s) | 50 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 110 |
| AgsI | TTSAA | 3 cut(s) | 157, 203, 213 |
| Alw26I | GTCTC | 1 cut(s) | 36 |
| ApeKI | GCWGC | 1 cut(s) | 265 |
| ApoI | RAATTY | 1 cut(s) | 50 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BbvI | GCAGC | 1 cut(s) | 277 |
| BcoDI | GTCTC | 1 cut(s) | 36 |
| BfmI | CTRYAG | 1 cut(s) | 281 |
| BisI | GCNGC | 3 cut(s) | 238, 263, 266 |
| BlsI | GCNGC | 3 cut(s) | 239, 264, 267 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 2 cut(s) | 6, 102 |
| BmsI | GCATC | 1 cut(s) | 232 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 110 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BseMII | CTCAG | 1 cut(s) | 131 |
| BseRI | GAGGAG | 1 cut(s) | 132 |
| BseXI | GCAGC | 1 cut(s) | 277 |
| BseYI | CCCAGC | 1 cut(s) | 109 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BsmAI | GTCTC | 1 cut(s) | 36 |
| BspACI | CCGC | 3 cut(s) | 237, 260, 263 |
| BspCNI | CTCAG | 1 cut(s) | 130 |
| BspLI | GGNNCC | 2 cut(s) | 6, 102 |
| Bst4CI | ACNGT | 1 cut(s) | 105 |
| Bst6I | CTCTTC | 1 cut(s) | 172 |
| BstDEI | CTNAG | 1 cut(s) | 117 |
| BstMAI | GTCTC | 1 cut(s) | 36 |
| BstSFI | CTRYAG | 1 cut(s) | 281 |
| BstV1I | GCAGC | 1 cut(s) | 277 |
| BtgZI | GCGATG | 1 cut(s) | 255 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CviAII | CATG | 1 cut(s) | 250 |
| CviJI | RGCY | 6 cut(s) | 21, 47, 121, 161, 178, 268 |
| CviKI_1 | RGCY | 6 cut(s) | 21, 47, 121, 161, 178, 268 |
| DdeI | CTNAG | 1 cut(s) | 117 |
| Eam1104I | CTCTTC | 1 cut(s) | 172 |
| EarI | CTCTTC | 1 cut(s) | 172 |
| EciI | GGCGGA | 1 cut(s) | 249 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| FaeI | CATG | 1 cut(s) | 253 |
| FaiI | YATR | 2 cut(s) | 230, 251 |
| FatI | CATG | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 3 cut(s) | 238, 263, 266 |
| Fsp4HI | GCNGC | 3 cut(s) | 238, 263, 266 |
| GluI | GCNGC | 3 cut(s) | 238, 263, 266 |
| GsaI | CCCAGC | 1 cut(s) | 113 |
| Hin1II | CATG | 1 cut(s) | 253 |
| HinfI | GANTC | 1 cut(s) | 124 |
| Hpy166II | GTNNAC | 1 cut(s) | 135 |
| Hpy188I | TCNGA | 1 cut(s) | 100 |
| Hpy8I | GTNNAC | 1 cut(s) | 135 |
| HpyAV | CCTTC | 2 cut(s) | 138, 172 |
| HpyCH4III | ACNGT | 1 cut(s) | 105 |
| HpyCH4IV | ACGT | 1 cut(s) | 221 |
| HpyF3I | CTNAG | 1 cut(s) | 117 |
| HpySE526I | ACGT | 1 cut(s) | 221 |
| Hsp92II | CATG | 1 cut(s) | 253 |
| LpnPI | CCDG | 2 cut(s) | 71, 95 |
| Lsp1109I | GCAGC | 1 cut(s) | 277 |
| LweI | GCATC | 1 cut(s) | 232 |
| MaeII | ACGT | 1 cut(s) | 221 |
| MboII | GAAGA | 1 cut(s) | 159 |
| MluCI | AATT | 3 cut(s) | 50, 66, 213 |
| MmeI | TCCRAC | 2 cut(s) | 78, 242 |
| MnlI | CCTC | 1 cut(s) | 153 |
| NlaIII | CATG | 1 cut(s) | 253 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 102 |
| PfeI | GAWTC | 1 cut(s) | 124 |
| PkrI | GCNGC | 3 cut(s) | 239, 264, 267 |
| PspFI | CCCAGC | 1 cut(s) | 109 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 102 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| SatI | GCNGC | 3 cut(s) | 238, 263, 266 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SetI | ASST | 3 cut(s) | 60, 210, 224 |
| SfaNI | GCATC | 1 cut(s) | 232 |
| SfcI | CTRYAG | 1 cut(s) | 281 |
| SgeI | CNNG | 5 cut(s) | 28, 37, 70, 122, 262 |
| SinI | GGWCC | 1 cut(s) | 4 |
| Sse9I | AATT | 3 cut(s) | 50, 66, 213 |
| SsiI | CCGC | 3 cut(s) | 237, 260, 263 |
| TaaI | ACNGT | 1 cut(s) | 105 |
| TaiI | ACGT | 1 cut(s) | 224 |
| TaqI | TCGA | 1 cut(s) | 85 |
| TasI | AATT | 3 cut(s) | 50, 66, 213 |
| TauI | GCSGC | 2 cut(s) | 240, 265 |
| TfiI | GAWTC | 1 cut(s) | 124 |
| TseI | GCWGC | 1 cut(s) | 265 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 50 |