Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006133

Physical Location & Seq

Genomic Coordinates Reverse (-)

9891597 .. 9895299

Gene Structure 3703 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0122500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGCATTGTGGATTCGAGTGCTTCTACTTCTCTTGGCTTGCCTTCTTCCAGCTTTGGTTGAGAGCAGGGTTCGACACTACAAGTTTAATGTGGTGCTGAAAAACACTACCAGACTATGCTCCACCAAGCCAATTGTAACCATCAACGGTCGTTTCCCAGGGCCAACTCTCTATGCCAGGGAAGACGACACCGTTCTTGTCAAAGTCACCAACCATGTCAAGTACAATGTTTCCATTCACTGGCATGGTATCCGGCAACTCCGGACCGGTTGGGCAGATGGACCAGCATACATCACACAATGCCCTATTCCTCAAGGCCAAAGCTATGTATACAACTTCACCATCACAGGCCAAAGAGGCACACTTCTTTGGCATGCGCATATTCTCTGGCTTAGGGCCACAGTCCATGGTGCTCTTGTCATTTTGCCCAAGCGTGGTGTGCCCTATCCTTTCCCGACACCCCACAAGGAAGTTCCTGTTGTATTGGGTGAATGGTGGAAATCAGATACTGAAGCAGTGGTTAATGAAGCTCTCAAAGGCGGTGTAGCACCTAACGTGTCAGATGCTCACACTATTAACGGTCATCCAGGCTTTGTCGCTCCAAATTGTAGCACACAGGGCGGCTTCAAGTTGTCTGTGGAAAGTGGCAAGACCTACTTGCTCCGCATCATCAATGCTGCGCTCAATGAAGAGCTCTTCTTCAAAATTGCCGGACACAAGTTGACGGTAGTGGAAGTCGATGCCACCTATGTAAAACCCTTCAAAATTGACACCATAGTGATTGCCCCTGGACAAACCACCAATGCCCTCATCACCGCAAACCAAAACTCTGGCAAGTACTTGGTTGCCGCCTCCCCATTCATGGACACTCCCGTTGTTGCCGTAGACAACCTGACAGCCACGGCCACTCTGCACTATTCAGGCACACTTTCTAATTCGCCCACAACTCTCACTAGCCCACCTCCTCGAAACGCTACCCAAGTCGCCAACAGTTTTATCGACTCTCTCAGAAGCCTTAATACAAAGACCTTTCCTGCAAAAGTCCCCTTAAAAATTGACCACAGCCTTTTGTTCACAGTTAGTCTAGGGGTTAACCCATGTCCTAGTTGCAAAGCCGGTAATGGAAGCCGTGTGGTGGCCAGTGTTAACAACGTCACATTTGTTATGCCAACCACAGCTCTGCTTCAAGCACATTTTTTCAACACTAGTGGGGTTTTCACCTCTGATTTTCCTGCTAACCCACCAAATGCTTTCAATTTTTCTGGAGGTCTGCCAGCAAATTCAAGTTTGGCGACTACAAATGGGACAAAGGTTTATAGGTTGGCTTATAACTCGACTGTTCAACTTGTTTTGCAAGACACTGGGATTATAGCCCCTGAGAACCACCCAGTACATTTGCATGGCTTCAATTTCTTTGTGGTTGGCAAGGGACTTGGAAATTACAACCCCAAGACGGATCCTAAGAACTTTAATCTTGTTGATCCTGTTGAAAGGAACACAATTGGTGTTCCATCTGGTGGTTGGGTAGCCATCCGATTTCTCGCAGATAATCCAGGTGTTTGGTTCATGCATTGCCATTTAGAAGTGCACACAACATGGGGGCTTAAGATGGCATTTTTGGTGGACAATGGTAAAGGACCAAATCAATCACTTCTACCTCCTCCAAAGGATCTTCCAACTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

561

Amino Acids

61.0

Weight (kDa)

9.35

Isoelectric Point (pI)

31.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 144	1.8e-40	Multicopper oxidase
Cu-oxidase	PF00394	157 - 308	1e-47	Multicopper oxidase
Cu-oxidase_2	PF07731	410 - 544	1.6e-42	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03720 AT5G03720
fragaria_vesca	FvH4_6g17890
malus_domestica	MD12G1017900.v1.1 MD14G1015900.v1.1
prunus_persica	Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1 Prupe.7G117200_v2.0.a1
pyrus_communis	pycom03g05130 pycom12g01490 pycom14g01370
rosa_chinensis	RchiOBHm_Chr3g0472131 RchiOBHm_Chr3g0472141
rosa_laevigata	RLG00000024102
rosa_multiflora	Rmu_sc0002532.1_g000026
rosa_roxburghii	Rroxscaffold_6G00409220
rosa_rugosa	Rorug03G0122500 Rorug03G0122600
rosa_samantha	Rh3AG174300 Rh3BG199700 Rh3CG190800 Rh3CG198200 Rh3DG174800
rosa_wichuraiana	Rw3G016650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1329
Acc16I	TGCGCA	1 cut(s)	378
AccB7I	CCANNNNNTGG	2 cut(s)	240, 1517
AccI	GTMKAC	2 cut(s)	330, 885
AccIII	TCCGGA	1 cut(s)	261
AciI	CCGC	5 cut(s)	540, 621, 664, 816, 849
AclWI	GGATC	4 cut(s)	1451, 1464, 1475, 1677
AcoI	YGGCCR	2 cut(s)	903, 1137
AcsI	RAATTY	1 cut(s)	1279
AcuI	CTGAAG	1 cut(s)	531
AfaI	GTAC	3 cut(s)	224, 839, 1392
AfiI	CCNNNNNNNGG	6 cut(s)	240, 434, 862, 1135, 1453, 1517
AflII	CTTAAG	1 cut(s)	1604
AflIII	ACRYGT	1 cut(s)	555
AgeI	ACCGGT	1 cut(s)	266
AhlI	ACTAGT	1 cut(s)	1205
AjnI	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
AleI	CACNNNNGTG	1 cut(s)	776
AluBI	AGCT	5 cut(s)	53, 324, 530, 694, 1178
AluI	AGCT	5 cut(s)	53, 324, 530, 694, 1178
Alw21I	GWGCWC	3 cut(s)	415, 696, 1590
Alw44I	GTGCAC	1 cut(s)	1586
AlwI	GGATC	4 cut(s)	1451, 1464, 1475, 1677
AlwNI	CAGNNNCTG	1 cut(s)	509
Aor13HI	TCCGGA	1 cut(s)	261
AoxI	GGCC	6 cut(s)	161, 316, 349, 396, 903, 1137
ApaLI	GTGCAC	1 cut(s)	1586
ApeKI	GCWGC	1 cut(s)	677
ApoI	RAATTY	1 cut(s)	1279
AsiGI	ACCGGT	1 cut(s)	266
AspLEI	GCGC	2 cut(s)	379, 682
AspS9I	GGNCC	5 cut(s)	161, 264, 281, 396, 1637
AsuHPI	GGTGA	5 cut(s)	199, 331, 500, 805, 1210
AvaII	GGWCC	3 cut(s)	264, 281, 1637
BaeGI	GKGCMC	2 cut(s)	444, 1590
BalI	TGGCCA	1 cut(s)	1139
BamHI	GGATCC	1 cut(s)	1456
BanII	GRGCYC	1 cut(s)	696
BarI	GAAGNNNNNNTAC	2 cut(s)	1003, 1035
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	3 cut(s)	415, 696, 1590
BbvI	GCAGC	1 cut(s)	664
BccI	CCATC	6 cut(s)	149, 272, 350, 1519, 1538, 1603
BceAI	ACGGC	3 cut(s)	866, 918, 1113
BciT130I	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BciVI	GTATCC	1 cut(s)	260
BcuI	ACTAGT	1 cut(s)	1205
BfaI	CTAG	4 cut(s)	954, 1085, 1104, 1206
BfrI	CTTAAG	1 cut(s)	1604
BfuI	GTATCC	1 cut(s)	260
BglI	GCCNNNNNGGC	1 cut(s)	357
BisI	GCNGC	3 cut(s)	622, 678, 849
BlsI	GCNGC	3 cut(s)	623, 679, 850
BmcAI	AGTACT	1 cut(s)	839
Bme1390I	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
Bme18I	GGWCC	3 cut(s)	264, 281, 1637
BmgT120I	GGNCC	5 cut(s)	161, 264, 281, 396, 1637
BmiI	GGNNCC	1 cut(s)	1458
BmrFI	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
BmrI	ACTGGG	2 cut(s)	1371, 1382
BmsI	GCATC	3 cut(s)	553, 675, 730
BmuI	ACTGGG	2 cut(s)	1371, 1382
BpiI	GAAGAC	1 cut(s)	189
BpmI	CTGGAG	1 cut(s)	1284
Bpu10I	CCTNAGC	1 cut(s)	392
BpuEI	CTTGAG	1 cut(s)	297
BsaJI	CCNNGG	6 cut(s)	157, 158, 177, 406, 787, 900
BsaWI	WCCGGW	2 cut(s)	261, 266
Bsc4I	CCNNNNNNNGG	6 cut(s)	240, 434, 862, 1135, 1453, 1517
Bse118I	RCCGGY	2 cut(s)	266, 1115
Bse1I	ACTGG	4 cut(s)	245, 1140, 1366, 1388
Bse3DI	GCAATG	1 cut(s)	1570
BseAI	TCCGGA	1 cut(s)	261
BseBI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BseDI	CCNNGG	6 cut(s)	157, 158, 177, 406, 787, 900
BseGI	GGATG	2 cut(s)	583, 1530
BseLI	CCNNNNNNNGG	6 cut(s)	240, 434, 862, 1135, 1453, 1517
BseMI	GCAATG	1 cut(s)	1570
BseMII	CTCAG	2 cut(s)	1021, 1368
BseNI	ACTGG	4 cut(s)	245, 1140, 1366, 1388
BseRI	GAGGAG	2 cut(s)	954, 1650
BseSI	GKGCMC	2 cut(s)	444, 1590
BseXI	GCAGC	1 cut(s)	664
BsgI	GTGCAG	1 cut(s)	896
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
BshTI	ACCGGT	1 cut(s)	266
BsiEI	CGRYCG	1 cut(s)	151
BsiHKAI	GWGCWC	3 cut(s)	415, 696, 1590
BsiSI	CCGG	5 cut(s)	253, 262, 267, 711, 1116
BslFI	GGGAC	3 cut(s)	1028, 1318, 1443
BslI	CCNNNNNNNGG	6 cut(s)	240, 434, 862, 1135, 1453, 1517
BsmFI	GGGAC	3 cut(s)	1028, 1318, 1443
BsnI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
Bsp1286I	GDGCHC	4 cut(s)	415, 444, 696, 1590
Bsp13I	TCCGGA	1 cut(s)	261
Bsp143I	GATC	3 cut(s)	1456, 1480, 1669
Bsp19I	CCATGG	1 cut(s)	406
BspACI	CCGC	5 cut(s)	540, 621, 664, 816, 849
BspANI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
BspCNI	CTCAG	2 cut(s)	1020, 1369
BspEI	TCCGGA	1 cut(s)	261
BspLI	GGNNCC	1 cut(s)	1458
BspPI	GGATC	4 cut(s)	1451, 1464, 1475, 1677
BspQI	GCTCTTC	2 cut(s)	684, 701
BspTI	CTTAAG	1 cut(s)	1604
BsrDI	GCAATG	1 cut(s)	1570
BsrFI	RCCGGY	2 cut(s)	266, 1115
BsrI	ACTGG	4 cut(s)	245, 1140, 1366, 1388
BssAI	RCCGGY	2 cut(s)	266, 1115
BssECI	CCNNGG	6 cut(s)	157, 158, 177, 406, 787, 900
BssMI	GATC	3 cut(s)	1456, 1480, 1669
BssNAI	GTATAC	1 cut(s)	331
BssT1I	CCWWGG	1 cut(s)	406
Bst1107I	GTATAC	1 cut(s)	331
Bst2UI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
Bst4CI	ACNGT	8 cut(s)	149, 193, 403, 581, 727, 992, 1078, 1339
Bst6I	CTCTTC	2 cut(s)	684, 701
BstAFI	CTTAAG	1 cut(s)	1604
BstC8I	GCNNGC	3 cut(s)	40, 375, 1275
BstDEI	CTNAG	4 cut(s)	392, 1007, 1377, 1461
BstDSI	CCRYGG	2 cut(s)	406, 900
BstF5I	GGATG	2 cut(s)	583, 1530
BstHHI	GCGC	2 cut(s)	379, 682
BstKTI	GATC	3 cut(s)	1459, 1483, 1672
BstMBI	GATC	3 cut(s)	1456, 1480, 1669
BstMCI	CGRYCG	1 cut(s)	151
BstMWI	GCNNNNNNNGC	3 cut(s)	357, 439, 618
BstNI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BstNSI	RCATGY	1 cut(s)	377
BstSCI	CCNGG	5 cut(s)	157, 176, 586, 787, 1552
BstSLI	GKGCMC	2 cut(s)	444, 1590
BstV1I	GCAGC	1 cut(s)	664
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	2 cut(s)	1456, 1669
BstXI	CCANNNNNNTGG	2 cut(s)	830, 1560
BstYI	RGATCY	2 cut(s)	1456, 1669
BstZ17I	GTATAC	1 cut(s)	331
BsuI	GTATCC	1 cut(s)	260
BsuRI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
BtgI	CCRYGG	2 cut(s)	406, 900
BtsCI	GGATG	2 cut(s)	583, 1530
BtsI	GCAGTG	1 cut(s)	522
BtsIMutI	CAGTG	4 cut(s)	238, 522, 1147, 1359
Cac8I	GCNNGC	3 cut(s)	40, 375, 1275
CaiI	CAGNNNCTG	1 cut(s)	509
CfoI	GCGC	2 cut(s)	379, 682
Cfr10I	RCCGGY	2 cut(s)	266, 1115
Cfr13I	GGNCC	5 cut(s)	161, 264, 281, 396, 1637
CpoI	CGGWCCG	1 cut(s)	264
Csp6I	GTAC	3 cut(s)	223, 838, 1391
CspAI	ACCGGT	1 cut(s)	266
CspCI	CAANNNNNGTGG	2 cut(s)	1189, 1224
CspI	CGGWCCG	1 cut(s)	264
CviAII	CATG	9 cut(s)	215, 245, 374, 407, 862, 1098, 1400, 1567, 1596
CviQI	GTAC	3 cut(s)	223, 838, 1391
DdeI	CTNAG	4 cut(s)	392, 1007, 1377, 1461
DpnI	GATC	3 cut(s)	1458, 1482, 1671
DpnII	GATC	3 cut(s)	1456, 1480, 1669
EaeI	YGGCCR	2 cut(s)	903, 1137
Eam1104I	CTCTTC	2 cut(s)	684, 701
EarI	CTCTTC	2 cut(s)	684, 701
Ecl136II	GAGCTC	1 cut(s)	694
Eco130I	CCWWGG	1 cut(s)	406
Eco24I	GRGCYC	1 cut(s)	696
Eco47I	GGWCC	3 cut(s)	264, 281, 1637
Eco53kI	GAGCTC	1 cut(s)	694
Eco57I	CTGAAG	1 cut(s)	531
EcoICRI	GAGCTC	1 cut(s)	694
EcoRII	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
EcoT14I	CCWWGG	1 cut(s)	406
EcoT22I	ATGCAT	1 cut(s)	1572
EcoT38I	GRGCYC	1 cut(s)	696
ErhI	CCWWGG	1 cut(s)	406
FaeI	CATG	9 cut(s)	218, 248, 377, 410, 865, 1101, 1403, 1570, 1599
FalI	AAGNNNNNCTT	2 cut(s)	641, 673
FaqI	GGGAC	3 cut(s)	1028, 1318, 1443
FatI	CATG	9 cut(s)	214, 244, 373, 406, 861, 1097, 1399, 1566, 1595
FblI	GTMKAC	2 cut(s)	330, 885
Fnu4HI	GCNGC	3 cut(s)	622, 678, 849
FokI	GGATG	2 cut(s)	570, 1517
FriOI	GRGCYC	1 cut(s)	696
Fsp4HI	GCNGC	3 cut(s)	622, 678, 849
FspAI	RTGCGCAY	1 cut(s)	378
FspBI	CTAG	4 cut(s)	954, 1085, 1104, 1206
FspI	TGCGCA	1 cut(s)	378
GlaI	GCGC	2 cut(s)	378, 681
GluI	GCNGC	3 cut(s)	622, 678, 849
GsuI	CTGGAG	1 cut(s)	1284
HaeIII	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
HapII	CCGG	5 cut(s)	253, 262, 267, 711, 1116
HhaI	GCGC	2 cut(s)	379, 682
Hin1II	CATG	9 cut(s)	218, 248, 377, 410, 865, 1101, 1403, 1570, 1599
Hin6I	GCGC	2 cut(s)	377, 680
HinP1I	GCGC	2 cut(s)	377, 680
HincII	GTYRAC	3 cut(s)	723, 1093, 1147
HindII	GTYRAC	3 cut(s)	723, 1093, 1147
HinfI	GANTC	2 cut(s)	13, 1001
HpaI	GTTAAC	2 cut(s)	1093, 1147
HpaII	CCGG	5 cut(s)	253, 262, 267, 711, 1116
HphI	GGTGA	5 cut(s)	199, 331, 500, 805, 1210
Hpy166II	GTNNAC	8 cut(s)	331, 723, 886, 1074, 1093, 1147, 1588, 1624
Hpy188I	TCNGA	5 cut(s)	505, 562, 1010, 1225, 1535
Hpy188III	TCNNGA	3 cut(s)	262, 454, 1263
Hpy8I	GTNNAC	8 cut(s)	331, 723, 886, 1074, 1093, 1147, 1588, 1624
HpyAV	CCTTC	2 cut(s)	53, 769
HpyCH4III	ACNGT	8 cut(s)	149, 193, 403, 581, 727, 992, 1078, 1339
HpyCH4IV	ACGT	2 cut(s)	555, 1152
HpyCH4V	TGCA	7 cut(s)	913, 1037, 1110, 1354, 1399, 1570, 1588
HpyF10VI	GCNNNNNNNGC	3 cut(s)	357, 439, 618
HpyF3I	CTNAG	4 cut(s)	392, 1007, 1377, 1461
HpySE526I	ACGT	2 cut(s)	555, 1152
Hsp92II	CATG	9 cut(s)	218, 248, 377, 410, 865, 1101, 1403, 1570, 1599
HspAI	GCGC	2 cut(s)	377, 680
Kpn2I	TCCGGA	1 cut(s)	261
KspAI	GTTAAC	2 cut(s)	1093, 1147
Kzo9I	GATC	3 cut(s)	1456, 1480, 1669
LguI	GCTCTTC	2 cut(s)	684, 701
LmnI	GCTCC	3 cut(s)	125, 604, 666
Lsp1109I	GCAGC	1 cut(s)	664
LweI	GCATC	3 cut(s)	553, 675, 730
MaeI	CTAG	4 cut(s)	954, 1085, 1104, 1206
MaeII	ACGT	2 cut(s)	555, 1152
MaeIII	GTNAC	3 cut(s)	136, 205, 1153
MalI	GATC	3 cut(s)	1458, 1482, 1671
MboI	GATC	3 cut(s)	1456, 1480, 1669
MboII	GAAGA	6 cut(s)	38, 194, 688, 691, 701, 1664
MfeI	CAATTG	2 cut(s)	132, 1500
MflI	RGATCY	2 cut(s)	1456, 1669
MhlI	GDGCHC	4 cut(s)	415, 444, 696, 1590
MlsI	TGGCCA	1 cut(s)	1139
MluNI	TGGCCA	1 cut(s)	1139
MlyI	GAGTC	1 cut(s)	995
Mox20I	TGGCCA	1 cut(s)	1139
Mph1103I	ATGCAT	1 cut(s)	1572
MroI	TCCGGA	1 cut(s)	261
MscI	TGGCCA	1 cut(s)	1139
MslI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
Msp20I	TGGCCA	1 cut(s)	1139
MspCI	CTTAAG	1 cut(s)	1604
MspI	CCGG	5 cut(s)	253, 262, 267, 711, 1116
MspR9I	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
MunI	CAATTG	2 cut(s)	132, 1500
MvaI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
MwoI	GCNNNNNNNGC	3 cut(s)	357, 439, 618
NcoI	CCATGG	1 cut(s)	406
NdeII	GATC	3 cut(s)	1456, 1480, 1669
NlaIII	CATG	9 cut(s)	218, 248, 377, 410, 865, 1101, 1403, 1570, 1599
NlaIV	GGNNCC	1 cut(s)	1458
NmuCI	GTSAC	2 cut(s)	205, 1153
NsbI	TGCGCA	1 cut(s)	378
NsiI	ATGCAT	1 cut(s)	1572
NspI	RCATGY	1 cut(s)	377
OliI	CACNNNNGTG	1 cut(s)	776
PaeI	GCATGC	1 cut(s)	377
PasI	CCCWGGG	1 cut(s)	158
PciSI	GCTCTTC	2 cut(s)	684, 701
PfeI	GAWTC	1 cut(s)	13
PflMI	CCANNNNNTGG	2 cut(s)	240, 1517
PinAI	ACCGGT	1 cut(s)	266
PkrI	GCNGC	3 cut(s)	623, 679, 850
PleI	GAGTC	1 cut(s)	995
PpsI	GAGTC	1 cut(s)	995
PsiI	TTATAA	1 cut(s)	1329
Psp124BI	GAGCTC	1 cut(s)	696
Psp6I	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
PspGI	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
PspN4I	GGNNCC	1 cut(s)	1458
PspPI	GGNCC	5 cut(s)	161, 264, 281, 396, 1637
PstNI	CAGNNNCTG	1 cut(s)	509
PsuI	RGATCY	2 cut(s)	1456, 1669
RsaI	GTAC	3 cut(s)	224, 839, 1392
RsaNI	GTAC	3 cut(s)	223, 838, 1391
RseI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
Rsr2I	CGGWCCG	1 cut(s)	264
RsrII	CGGWCCG	1 cut(s)	264
SacI	GAGCTC	1 cut(s)	696
SapI	GCTCTTC	2 cut(s)	684, 701
SatI	GCNGC	3 cut(s)	622, 678, 849
Sau3AI	GATC	3 cut(s)	1456, 1480, 1669
Sau96I	GGNCC	5 cut(s)	161, 264, 281, 396, 1637
ScaI	AGTACT	1 cut(s)	839
SchI	GAGTC	1 cut(s)	995
ScrFI	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
SduI	GDGCHC	4 cut(s)	415, 444, 696, 1590
SfaNI	GCATC	3 cut(s)	553, 675, 730
SinI	GGWCC	3 cut(s)	264, 281, 1637
SmiMI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
SmlI	CTYRAG	2 cut(s)	312, 1604
SmoI	CTYRAG	2 cut(s)	312, 1604
SpeI	ACTAGT	1 cut(s)	1205
SphI	GCATGC	1 cut(s)	377
SsiI	CCGC	5 cut(s)	540, 621, 664, 816, 849
SspMI	CTAG	4 cut(s)	954, 1085, 1104, 1206
SstI	GAGCTC	1 cut(s)	696
StyD4I	CCNGG	5 cut(s)	157, 176, 586, 787, 1552
StyI	CCWWGG	1 cut(s)	406
TaaI	ACNGT	8 cut(s)	149, 193, 403, 581, 727, 992, 1078, 1339
TaiI	ACGT	2 cut(s)	558, 1155
TaqI	TCGA	6 cut(s)	16, 73, 738, 967, 999, 1334
TatI	WGTACW	3 cut(s)	222, 837, 1390
TauI	GCSGC	2 cut(s)	624, 851
TfiI	GAWTC	1 cut(s)	13
TscAI	CASTG	4 cut(s)	245, 522, 1147, 1366
TseFI	GTSAC	2 cut(s)	205, 1153
TseI	GCWGC	1 cut(s)	677
Tsp45I	GTSAC	2 cut(s)	205, 1153
TspDTI	ATGAA	4 cut(s)	540, 702, 850, 1555
TspGWI	ACGGA	1 cut(s)	1469
TspRI	CASTG	4 cut(s)	245, 522, 1147, 1366
Van91I	CCANNNNNTGG	2 cut(s)	240, 1517
Vha464I	CTTAAG	1 cut(s)	1604
VneI	GTGCAC	1 cut(s)	1586
VpaK11BI	GGWCC	3 cut(s)	264, 281, 1637
XapI	RAATTY	1 cut(s)	1279
XceI	RCATGY	1 cut(s)	377
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1518
XmiI	GTMKAC	2 cut(s)	330, 885
XspI	CTAG	4 cut(s)	954, 1085, 1104, 1206
ZrmI	AGTACT	1 cut(s)	839
Zsp2I	ATGCAT	1 cut(s)	1572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.