Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0006479

Physical Location & Seq

Genomic Coordinates Forward (+)

6386909 .. 6390221

Gene Structure 3313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g07990.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGTTATCATCTAGTAAGCTTCTAGCTGGTGCAAAACGAAACGATATACCGACTTTTGTTGACCACACCAACCGAGCCCGAGCCATGTGGCTAACATGCCTAGCCTCTGCATTCCGTACATGTCTTGCTTGCACCATAGTTGCCCTAACCACCCTCTATGGCCCACAATCTCTCCGACGCCAAGTAGCCTTCCCGGCATTCTCTTATGTCACAGTCCTCCTCATTGTTCCTGATGCAACTCTGGGGCACACACTTTGTGGCTGTTGGCTCGGGCTCTACGCCACGGCACAAACTATTGGGCCGGCGGTGTTGAGTCTGTGGCTGATTGGGCCAGCCCGGCTTTCGACCAGCACGACCGCTCTGGCGGTGGGGCTTGCTGCATTCGGGGTGGCTCTGCCGGAGATTACTCACATTGTGACCAAACGCATAGCACTTGGACAGATTGTGATTATGTATGTCATAGCTTATATAAATGGGGGCCATACAGATGCTATCATGCACCCTGTCCACGTGGCTACAAGCACGGGAATTGGGGTGTTGGCTTGTGTTTTGGCTCTGTTGATTCCCTTCCCACGCCTTGCTTCTCGAGAGGTTAAACAAAACGCAGAGCTACTTGCCGAGAATGCTTCACAAAGGCTCAAGATCTTTGGAGAGGCGTTCTGCGCAGAAGATAGCACATCAGCACTTGCATCACTTTCTCAAGCAAATTCGTTGGCTTCCACTGCAACTATGCTTTTTCAAACTATCAAAAACCACCAGGAAAGCATGAAGTGGGAGAGAGTTCCGCTGAAGTTAATTTCGAGATGCGGCTATGTAAATCCAGGAGATAGATTGCAGGGCTTAGAGATACCCTTTAGAGGAATGGAAATGGCATTAACCTGTATTCCTTCATTTCCAGTTAAGGTGGTGAATGGAGAGCTCAGTAAAGATGCTCTACTTAGACTAGTAGAGCAGCACATGAGCCTAGACTTAAGCACGCCTTGTGATTCGGTAACTGTTCCTGAATCAAAAGCAGAAAATGTTGGTTTCCTCCAAACACTTCAAACCATCCCACAAATCCACCAAGATTTACCCCCAATTTTCTTTTTGTTTTGCATCAATCTCCTCCAAGGCAAGTTATTATCCAGAAGTAAGACTGTACAGGAAAAATTTTTGGTTCACCAGAATGGAGGAGCAACTAATTCGTTCAAACAAAATGGATTGTATTTCAAGATATGGAGTAACTTGTCCACCAAGGTAAGCAGCAAGAGGCTTATGTCAGCTTTCAAATGTTCACTCTCCTTGGGTCTTGCCGTGTTTTTCGGTTTGATGTACAGCAAAGATGATGGCTACTGGGCAGGACTCCCGGTAGCAATCAGTTTTGCATCAACCAGAGAAGCAACATTTAAAGTTTCAAATGTTAAAGTACAAGGGACTGTTTTAGGAACTGTATATGGAGTTTTGGGTTGGTTTCTCTTCCAAAGGTTTTTGTCAATGAGACTTTTATCTCTGATTCCTTGGTTCATTTTCACCAGTTTTCTCCAGCGTAGCCGAATGTACGGCCAGGCAGGAGGCATTTCAGCAGTAATTGGAGCCGTACTAGTTTTGGGGAGAAGAAACTTTGGTCCTCCAAGTGAATTTGCCATAGCCAGAATCACAGAAACCTTCATCGGATTATCTAGTTCTATTATCGTTGACCTAATCTTGCAACCCACAAGAGCTTCTGCTCTTGCAAAAGTTCAACTCTCTAGGACTCTTGGGACATTGCAGGAGTGCATCAACTCGGTGAGTCTTCAATCAGGAAGAGCCAATTTGGAAGATAATCAAAAGAGACTGAAAATGCATACTGAAGAACTTGGGAAGTTGATTGGAGAAGCTGAGGGGGAGCCCAATTTCTGGTTTTTGCCTTTTCATAGTGCTTGCTATGGAAAACTCTTGAGGTCTTTCTCCAGAATGATGGACTTGCTAGTTTTAAGTGCTCATGCAGTTGGAATTCTTGAAGAAAATTCACAAACACTTGAGGCTTCATGGAAGGAAATTGTACATACATTGGAATGTGACCTTGAACATTTCAAGAAAATGGTTGGAAGTTTGATGACATGCTTCAAGGATATCACCTTGATAAAATCAATCACAGTTCTTGATCAAAAGAGTAACATATCTCCTGACCCCGAGTTGGGAAAATCTCGAACACCGAATATTTTTAGGGCTTGTAGTTCAGAGATGGATAAGATTATGAGTTCTTATCTCCAGCACTCGGAGGAAGTCGTTGATAAAATTGATGCTAAAAGTGAGGAGCTCAAGAGCCAAATGGTTTTGTGTTTAAGTGGTTTAGGATTCTGCATAAGTAGTTTAATAAGAGAAACAAGAGAGATTGAAGAGGGAATCAGGGAACTTGTTCAATGGGAGAATCCTTCTTCCCACATTAATTTGTACGAAATCTCTTGTAAGTTGCATGATTATCAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FUSC_2

Protein Analysis

817

Amino Acids

89.92

Weight (kDa)

8.68

Isoelectric Point (pI)

44.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28780
fragaria_vesca	FvH4_3g35590 FvH4_3g35590
malus_domestica	MD03G1096700.v1.1 MD11G1142900.v1.1
prunus_persica	Prupe.6G081000_v2.0.a1
pyrus_communis	pycom03g07990
rosa_chinensis	RchiOBHm_Chr5g0063771
rosa_laevigata	RLG00000035612 RLG00000035669 RLG00000035670
rosa_multiflora	Rmu_sc0005685.1_g000022 Rmu_sc0005685.1_g000032 Rmu_ssc0000309.1_g000027
rosa_roxburghii	Rroxscaffold_1G00017070
rosa_rugosa	Rorug05G0359500 Rorug05G0359800
rosa_samantha	Rh5AG418300 Rh5BG433400 Rh5BG433900 Rh5CG456600 Rh5CG457100 Rh5DG447000 Rh5DG447200
rosa_wichuraiana	Rw5G039280 Rw5G039290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	664
AccB7I	CCANNNNNTGG	1 cut(s)	1875
AccBSI	CCGCTC	1 cut(s)	359
AciI	CCGC	5 cut(s)	305, 357, 365, 785, 807
AcoI	YGGCCR	1 cut(s)	1540
AcsI	RAATTY	5 cut(s)	706, 1148, 1616, 1971, 1984
AcuI	CTGAAG	2 cut(s)	809, 1848
AcvI	CACGTG	1 cut(s)	511
AcyI	GRCGYC	1 cut(s)	178
AdeI	CACNNNGTG	2 cut(s)	257, 415
AfaI	GTAC	8 cut(s)	118, 1140, 1313, 1407, 1538, 1578, 2022, 2414
AfiI	CCNNNNNNNGG	5 cut(s)	857, 1875, 2155, 2156, 2236
AflII	CTTAAG	1 cut(s)	970
AflIII	ACRYGT	1 cut(s)	119
AhlI	ACTAGT	2 cut(s)	943, 1579
AjnI	CCWGG	3 cut(s)	756, 820, 1542
AluBI	AGCT	9 cut(s)	19, 26, 464, 610, 919, 1262, 1700, 1856, 2278
AluI	AGCT	9 cut(s)	19, 26, 464, 610, 919, 1262, 1700, 1856, 2278
Alw21I	GWGCWC	3 cut(s)	921, 1960, 2280
Alw26I	GTCTC	2 cut(s)	1471, 1804
Ama87I	CYCGRG	4 cut(s)	78, 269, 585, 2150
AoxI	GGCC	5 cut(s)	160, 299, 329, 478, 1540
ApeKI	GCWGC	3 cut(s)	377, 952, 1242
ApoI	RAATTY	5 cut(s)	706, 1148, 1616, 1971, 1984
AseI	ATTAAT	1 cut(s)	2406
Asp700I	GAANNNNTTC	1 cut(s)	2376
AspLEI	GCGC	1 cut(s)	665
AspS9I	GGNCC	5 cut(s)	161, 299, 329, 478, 1604
AsuC2I	CCSGG	3 cut(s)	194, 337, 1346
AsuHPI	GGTGA	5 cut(s)	919, 1151, 1501, 1777, 2086
AvaI	CYCGRG	4 cut(s)	78, 269, 585, 2150
AvaII	GGWCC	1 cut(s)	1604
BaeGI	GKGCMC	1 cut(s)	249
BanII	GRGCYC	5 cut(s)	79, 276, 921, 1869, 2280
BbrPI	CACGTG	1 cut(s)	511
BbsI	GAAGAC	1 cut(s)	1763
Bbv12I	GWGCWC	3 cut(s)	921, 1960, 2280
BbvCI	CCTCAGC	1 cut(s)	1857
BbvI	GCAGC	3 cut(s)	364, 964, 1254
BccI	CCATC	4 cut(s)	1055, 1319, 1930, 2197
BceAI	ACGGC	4 cut(s)	300, 1277, 1555, 1559
BcgI	CGANNNNNNTGC	2 cut(s)	1164, 1198
BciT130I	CCWGG	3 cut(s)	758, 822, 1544
BclI	TGATCA	1 cut(s)	2122
BcnI	CCSGG	3 cut(s)	194, 337, 1346
BcoDI	GTCTC	2 cut(s)	1471, 1804
BcuI	ACTAGT	2 cut(s)	943, 1579
BfaI	CTAG	9 cut(s)	12, 23, 101, 944, 965, 1580, 1659, 1728, 1946
BfrI	CTTAAG	1 cut(s)	970
BglI	GCCNNNNNGGC	2 cut(s)	194, 337
BglII	AGATCT	1 cut(s)	642
BisI	GCNGC	4 cut(s)	378, 808, 953, 1243
BlsI	GCNGC	4 cut(s)	379, 809, 954, 1244
Bme1390I	CCNGG	6 cut(s)	194, 337, 758, 822, 1346, 1544
Bme18I	GGWCC	1 cut(s)	1604
BmeT110I	CYCGRG	4 cut(s)	78, 269, 585, 2150
BmgT120I	GGNCC	5 cut(s)	161, 299, 329, 478, 1604
BmiI	GGNNCC	3 cut(s)	479, 1573, 1866
BmrFI	CCNGG	6 cut(s)	194, 337, 758, 822, 1346, 1544
BmrI	ACTGGG	1 cut(s)	1342
BmsI	GCATC	9 cut(s)	223, 478, 698, 794, 919, 1104, 1373, 1764, 2251
BmuI	ACTGGG	1 cut(s)	1342
BpiI	GAAGAC	1 cut(s)	1763
BpmI	CTGGAG	3 cut(s)	1505, 1912, 2213
Bpu10I	CCTNAGC	1 cut(s)	1857
BpuEI	CTTGAG	5 cut(s)	623, 684, 1936, 2018, 2264
BpuMI	CCSGG	3 cut(s)	194, 337, 1346
BsaAI	YACGTR	1 cut(s)	511
BsaHI	GRCGYC	1 cut(s)	178
BsaJI	CCNNGG	5 cut(s)	282, 1108, 1233, 1281, 1496
BsaXI	ACNNNNNCTCC	2 cut(s)	156, 186
Bsc4I	CCNNNNNNNGG	5 cut(s)	857, 1875, 2155, 2156, 2236
Bse118I	RCCGGY	1 cut(s)	301
Bse1I	ACTGG	3 cut(s)	896, 1337, 1512
Bse3DI	GCAATG	1 cut(s)	1742
BseBI	CCWGG	3 cut(s)	758, 822, 1544
BseDI	CCNNGG	5 cut(s)	282, 1108, 1233, 1281, 1496
BseGI	GGATG	1 cut(s)	1047
BseLI	CCNNNNNNNGG	5 cut(s)	857, 1875, 2155, 2156, 2236
BseMI	GCAATG	1 cut(s)	1742
BseMII	CTCAG	2 cut(s)	934, 1848
BseNI	ACTGG	3 cut(s)	896, 1337, 1512
BseRI	GAGGAG	4 cut(s)	209, 1094, 1185, 2288
BseSI	GKGCMC	1 cut(s)	249
BseXI	GCAGC	3 cut(s)	364, 964, 1254
Bsh1285I	CGRYCG	1 cut(s)	357
BshFI	GGCC	5 cut(s)	162, 301, 331, 480, 1542
BsiEI	CGRYCG	1 cut(s)	357
BsiHKAI	GWGCWC	3 cut(s)	921, 1960, 2280
BsiHKCI	CYCGRG	4 cut(s)	78, 269, 585, 2150
BsiSI	CCGG	5 cut(s)	194, 302, 337, 398, 1346
BslFI	GGGAC	2 cut(s)	1426, 1753
BslI	CCNNNNNNNGG	5 cut(s)	857, 1875, 2155, 2156, 2236
BsmAI	GTCTC	2 cut(s)	1471, 1804
BsmFI	GGGAC	2 cut(s)	1426, 1753
BsmI	GAATGC	4 cut(s)	110, 197, 380, 628
BsnI	GGCC	5 cut(s)	162, 301, 331, 480, 1542
BsoBI	CYCGRG	4 cut(s)	78, 269, 585, 2150
Bsp1286I	GDGCHC	7 cut(s)	79, 249, 276, 921, 1869, 1960, 2280
Bsp1407I	TGTACA	3 cut(s)	1138, 1311, 2020
Bsp143I	GATC	2 cut(s)	642, 2122
BspACI	CCGC	5 cut(s)	305, 357, 365, 785, 807
BspANI	GGCC	5 cut(s)	162, 301, 331, 480, 1542
BspCNI	CTCAG	2 cut(s)	933, 1849
BspLI	GGNNCC	3 cut(s)	479, 1573, 1866
BspQI	GCTCTTC	1 cut(s)	1777
BspTI	CTTAAG	1 cut(s)	970
BsrBI	CCGCTC	1 cut(s)	359
BsrDI	GCAATG	1 cut(s)	1742
BsrFI	RCCGGY	1 cut(s)	301
BsrGI	TGTACA	3 cut(s)	1138, 1311, 2020
BsrI	ACTGG	3 cut(s)	896, 1337, 1512
BssAI	RCCGGY	1 cut(s)	301
BssECI	CCNNGG	5 cut(s)	282, 1108, 1233, 1281, 1496
BssMI	GATC	2 cut(s)	642, 2122
BssNI	GRCGYC	1 cut(s)	178
BssT1I	CCWWGG	4 cut(s)	1108, 1233, 1281, 1496
Bst2UI	CCWGG	3 cut(s)	758, 822, 1544
Bst4CI	ACNGT	6 cut(s)	214, 997, 1138, 1417, 1429, 2116
Bst6I	CTCTTC	3 cut(s)	1460, 1777, 2352
BstACI	GRCGYC	1 cut(s)	178
BstAFI	CTTAAG	1 cut(s)	970
BstAUI	TGTACA	3 cut(s)	1138, 1311, 2020
BstBAI	YACGTR	1 cut(s)	511
BstC8I	GCNNGC	6 cut(s)	130, 303, 333, 375, 977, 1900
BstDEI	CTNAG	4 cut(s)	841, 920, 938, 1857
BstDSI	CCRYGG	1 cut(s)	282
BstF5I	GGATG	1 cut(s)	1047
BstHHI	GCGC	1 cut(s)	665
BstKTI	GATC	2 cut(s)	645, 2125
BstMAI	GTCTC	2 cut(s)	1471, 1804
BstMBI	GATC	2 cut(s)	642, 2122
BstMCI	CGRYCG	1 cut(s)	357
BstMWI	GCNNNNNNNGC	6 cut(s)	194, 328, 337, 623, 662, 722
BstNI	CCWGG	3 cut(s)	758, 822, 1544
BstNSI	RCATGY	3 cut(s)	99, 123, 2082
BstSCI	CCNGG	6 cut(s)	192, 335, 756, 820, 1344, 1542
BstSLI	GKGCMC	1 cut(s)	249
BstV1I	GCAGC	3 cut(s)	364, 964, 1254
BstV2I	GAAGAC	1 cut(s)	1763
BstX2I	RGATCY	1 cut(s)	642
BstXI	CCANNNNNNTGG	1 cut(s)	1936
BstYI	RGATCY	1 cut(s)	642
BsuRI	GGCC	5 cut(s)	162, 301, 331, 480, 1542
BtgI	CCRYGG	1 cut(s)	282
BtsCI	GGATG	1 cut(s)	1047
BtsI	GCAGTG	1 cut(s)	720
BtsIMutI	CAGTG	1 cut(s)	720
Cac8I	GCNNGC	6 cut(s)	130, 303, 333, 375, 977, 1900
CfoI	GCGC	1 cut(s)	665
Cfr10I	RCCGGY	1 cut(s)	301
Cfr13I	GGNCC	5 cut(s)	161, 299, 329, 478, 1604
CseI	GACGC	1 cut(s)	186
Csp6I	GTAC	8 cut(s)	117, 1139, 1312, 1406, 1537, 1577, 2021, 2413
CviQI	GTAC	8 cut(s)	117, 1139, 1312, 1406, 1537, 1577, 2021, 2413
DdeI	CTNAG	4 cut(s)	841, 920, 938, 1857
DpnI	GATC	2 cut(s)	644, 2124
DpnII	GATC	2 cut(s)	642, 2122
DraI	TTTAAA	1 cut(s)	1387
DraIII	CACNNNGTG	2 cut(s)	257, 415
EaeI	YGGCCR	1 cut(s)	1540
Eam1104I	CTCTTC	3 cut(s)	1460, 1777, 2352
EarI	CTCTTC	3 cut(s)	1460, 1777, 2352
Ecl136II	GAGCTC	2 cut(s)	919, 2278
Eco130I	CCWWGG	4 cut(s)	1108, 1233, 1281, 1496
Eco24I	GRGCYC	5 cut(s)	79, 276, 921, 1869, 2280
Eco32I	GATATC	1 cut(s)	2092
Eco47I	GGWCC	1 cut(s)	1604
Eco53kI	GAGCTC	2 cut(s)	919, 2278
Eco57I	CTGAAG	2 cut(s)	809, 1848
Eco72I	CACGTG	1 cut(s)	511
Eco88I	CYCGRG	4 cut(s)	78, 269, 585, 2150
EcoICRI	GAGCTC	2 cut(s)	919, 2278
EcoRI	GAATTC	1 cut(s)	1971
EcoRII	CCWGG	3 cut(s)	756, 820, 1542
EcoRV	GATATC	1 cut(s)	2092
EcoT14I	CCWWGG	4 cut(s)	1108, 1233, 1281, 1496
EcoT22I	ATGCAT	1 cut(s)	1824
EcoT38I	GRGCYC	5 cut(s)	79, 276, 921, 1869, 2280
ErhI	CCWWGG	4 cut(s)	1108, 1233, 1281, 1496
FalI	AAGNNNNNCTT	2 cut(s)	964, 996
FaqI	GGGAC	2 cut(s)	1426, 1753
FbaI	TGATCA	1 cut(s)	2122
Fnu4HI	GCNGC	4 cut(s)	378, 808, 953, 1243
FokI	GGATG	1 cut(s)	1034
FriOI	GRGCYC	5 cut(s)	79, 276, 921, 1869, 2280
Fsp4HI	GCNGC	4 cut(s)	378, 808, 953, 1243
FspBI	CTAG	9 cut(s)	12, 23, 101, 944, 965, 1580, 1659, 1728, 1946
FspI	TGCGCA	1 cut(s)	664
GlaI	GCGC	1 cut(s)	664
GluI	GCNGC	4 cut(s)	378, 808, 953, 1243
GsuI	CTGGAG	3 cut(s)	1505, 1912, 2213
HaeIII	GGCC	5 cut(s)	162, 301, 331, 480, 1542
HapII	CCGG	5 cut(s)	194, 302, 337, 398, 1346
HgaI	GACGC	1 cut(s)	186
HhaI	GCGC	1 cut(s)	665
Hin1I	GRCGYC	1 cut(s)	178
Hin6I	GCGC	1 cut(s)	663
HinP1I	GCGC	1 cut(s)	663
HincII	GTYRAC	2 cut(s)	61, 1675
HindII	GTYRAC	2 cut(s)	61, 1675
HindIII	AAGCTT	1 cut(s)	17
HpaII	CCGG	5 cut(s)	194, 302, 337, 398, 1346
HphI	GGTGA	5 cut(s)	919, 1151, 1501, 1777, 2086
Hpy166II	GTNNAC	6 cut(s)	61, 508, 1159, 1230, 1274, 1675
Hpy188I	TCNGA	6 cut(s)	176, 1491, 1652, 2200, 2239, 2445
Hpy8I	GTNNAC	6 cut(s)	61, 508, 1159, 1230, 1274, 1675
Hpy99I	CGWCG	1 cut(s)	180
HpyAV	CCTTC	6 cut(s)	199, 577, 897, 1654, 2005, 2403
HpyCH4III	ACNGT	6 cut(s)	214, 997, 1138, 1417, 1429, 2116
HpyCH4IV	ACGT	1 cut(s)	510
HpyF10VI	GCNNNNNNNGC	6 cut(s)	194, 328, 337, 623, 662, 722
HpyF3I	CTNAG	4 cut(s)	841, 920, 938, 1857
HpySE526I	ACGT	1 cut(s)	510
Hsp92I	GRCGYC	1 cut(s)	178
HspAI	GCGC	1 cut(s)	663
KroI	GCCGGC	1 cut(s)	301
KroNI	GCCGGC	1 cut(s)	303
Ksp22I	TGATCA	1 cut(s)	2122
Kzo9I	GATC	2 cut(s)	642, 2122
LguI	GCTCTTC	1 cut(s)	1777
LmnI	GCTCC	4 cut(s)	1172, 1571, 1864, 2275
Lsp1109I	GCAGC	3 cut(s)	364, 964, 1254
LweI	GCATC	9 cut(s)	223, 478, 698, 794, 919, 1104, 1373, 1764, 2251
MaeI	CTAG	9 cut(s)	12, 23, 101, 944, 965, 1580, 1659, 1728, 1946
MaeII	ACGT	1 cut(s)	510
MaeIII	GTNAC	6 cut(s)	208, 415, 991, 1220, 2036, 2132
MalI	GATC	2 cut(s)	644, 2124
MbiI	CCGCTC	1 cut(s)	359
MboI	GATC	2 cut(s)	642, 2122
MflI	RGATCY	1 cut(s)	642
MhlI	GDGCHC	7 cut(s)	79, 249, 276, 921, 1869, 1960, 2280
MlyI	GAGTC	4 cut(s)	322, 1335, 1726, 1777
MmeI	TCCRAC	3 cut(s)	199, 1948, 2044
Mph1103I	ATGCAT	1 cut(s)	1824
MroNI	GCCGGC	1 cut(s)	301
MroXI	GAANNNNTTC	1 cut(s)	2376
MslI	CAYNNNNRTG	3 cut(s)	486, 1164, 2032
MspA1I	CMGCKG	1 cut(s)	787
MspCI	CTTAAG	1 cut(s)	970
MspI	CCGG	5 cut(s)	194, 302, 337, 398, 1346
MspR9I	CCNGG	6 cut(s)	194, 337, 758, 822, 1346, 1544
Mva1269I	GAATGC	4 cut(s)	110, 197, 380, 628
MvaI	CCWGG	3 cut(s)	758, 822, 1544
MwoI	GCNNNNNNNGC	6 cut(s)	194, 328, 337, 623, 662, 722
NaeI	GCCGGC	1 cut(s)	303
NciI	CCSGG	3 cut(s)	194, 337, 1346
NdeII	GATC	2 cut(s)	642, 2122
NgoMIV	GCCGGC	1 cut(s)	301
NlaIV	GGNNCC	3 cut(s)	479, 1573, 1866
NmeAIII	GCCGAG	1 cut(s)	643
NmuCI	GTSAC	3 cut(s)	208, 415, 2036
NsbI	TGCGCA	1 cut(s)	664
NsiI	ATGCAT	1 cut(s)	1824
NspI	RCATGY	3 cut(s)	99, 123, 2082
PaeR7I	CTCGAG	1 cut(s)	585
PciI	ACATGT	1 cut(s)	119
PciSI	GCTCTTC	1 cut(s)	1777
PcsI	WCGNNNNNNNCGW	1 cut(s)	350
PctI	GAATGC	4 cut(s)	110, 197, 380, 628
PdiI	GCCGGC	1 cut(s)	303
PdmI	GAANNNNTTC	1 cut(s)	2376
PfeI	GAWTC	8 cut(s)	562, 986, 1004, 1492, 1632, 2316, 2364, 2389
PflMI	CCANNNNNTGG	1 cut(s)	1875
PfoI	TCCNGGA	1 cut(s)	820
PkrI	GCNGC	4 cut(s)	379, 809, 954, 1244
PleI	GAGTC	4 cut(s)	321, 1335, 1726, 1776
PmaCI	CACGTG	1 cut(s)	511
PmlI	CACGTG	1 cut(s)	511
PpsI	GAGTC	4 cut(s)	321, 1335, 1726, 1776
Ppu21I	YACGTR	1 cut(s)	511
PscI	ACATGT	1 cut(s)	119
PshBI	ATTAAT	1 cut(s)	2406
Psp124BI	GAGCTC	2 cut(s)	921, 2280
Psp6I	CCWGG	3 cut(s)	756, 820, 1542
PspCI	CACGTG	1 cut(s)	511
PspGI	CCWGG	3 cut(s)	756, 820, 1542
PspN4I	GGNNCC	3 cut(s)	479, 1573, 1866
PspPI	GGNCC	5 cut(s)	161, 299, 329, 478, 1604
PsuI	RGATCY	1 cut(s)	642
RsaI	GTAC	8 cut(s)	118, 1140, 1313, 1407, 1538, 1578, 2022, 2414
RsaNI	GTAC	8 cut(s)	117, 1139, 1312, 1406, 1537, 1577, 2021, 2413
RseI	CAYNNNNRTG	3 cut(s)	486, 1164, 2032
SacI	GAGCTC	2 cut(s)	921, 2280
SapI	GCTCTTC	1 cut(s)	1777
SatI	GCNGC	4 cut(s)	378, 808, 953, 1243
Sau3AI	GATC	2 cut(s)	642, 2122
Sau96I	GGNCC	5 cut(s)	161, 299, 329, 478, 1604
SchI	GAGTC	4 cut(s)	322, 1335, 1726, 1777
ScrFI	CCNGG	6 cut(s)	194, 337, 758, 822, 1346, 1544
SduI	GDGCHC	7 cut(s)	79, 249, 276, 921, 1869, 1960, 2280
SfaNI	GCATC	9 cut(s)	223, 478, 698, 794, 919, 1104, 1373, 1764, 2251
Sfr274I	CTCGAG	1 cut(s)	585
SinI	GGWCC	1 cut(s)	1604
SlaI	CTCGAG	1 cut(s)	585
SmiMI	CAYNNNNRTG	3 cut(s)	486, 1164, 2032
SmlI	CTYRAG	7 cut(s)	585, 638, 699, 970, 1915, 1997, 2279
SmoI	CTYRAG	7 cut(s)	585, 638, 699, 970, 1915, 1997, 2279
SpeI	ACTAGT	2 cut(s)	943, 1579
SsiI	CCGC	5 cut(s)	305, 357, 365, 785, 807
SspI	AATATT	1 cut(s)	2179
SspMI	CTAG	9 cut(s)	12, 23, 101, 944, 965, 1580, 1659, 1728, 1946
SstI	GAGCTC	2 cut(s)	921, 2280
StyD4I	CCNGG	6 cut(s)	192, 335, 756, 820, 1344, 1542
StyI	CCWWGG	4 cut(s)	1108, 1233, 1281, 1496
TaaI	ACNGT	6 cut(s)	214, 997, 1138, 1417, 1429, 2116
TaiI	ACGT	1 cut(s)	513
TaqI	TCGA	4 cut(s)	344, 586, 800, 2167
TatI	WGTACW	4 cut(s)	1138, 1311, 1405, 2020
TauI	GCSGC	1 cut(s)	810
TfiI	GAWTC	8 cut(s)	562, 986, 1004, 1492, 1632, 2316, 2364, 2389
TscAI	CASTG	1 cut(s)	727
TseFI	GTSAC	3 cut(s)	208, 415, 2036
TseI	GCWGC	3 cut(s)	377, 952, 1242
Tsp45I	GTSAC	3 cut(s)	208, 415, 2036
TspDTI	ATGAA	6 cut(s)	782, 879, 1492, 1636, 1880, 1995
TspGWI	ACGGA	1 cut(s)	104
TspRI	CASTG	1 cut(s)	727
Van91I	CCANNNNNTGG	1 cut(s)	1875
Vha464I	CTTAAG	1 cut(s)	970
VpaK11BI	GGWCC	1 cut(s)	1604
VspI	ATTAAT	1 cut(s)	2406
XapI	RAATTY	5 cut(s)	706, 1148, 1616, 1971, 1984
XceI	RCATGY	3 cut(s)	99, 123, 2082
XhoI	CTCGAG	1 cut(s)	585
XmnI	GAANNNNTTC	1 cut(s)	2376
XspI	CTAG	9 cut(s)	12, 23, 101, 944, 965, 1580, 1659, 1728, 1946
Zsp2I	ATGCAT	1 cut(s)	1824

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.