Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006479

Physical Location & Seq

Genomic Coordinates Reverse (-)

69249955 .. 69253836

Gene Structure 3882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G039280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGCAACCTCTCAAGACCAAACCGACCGTGCCCGAGCCTTGTGGCTCACATGCCTAGCCTCGACCTTCCGAACCGCTCTAGCTTGCACCATAGTAGCCATCACCACCCTCTACGGCCCTTCCTCTCTCCGAAACCAAGTAGCTTTCCCTACATTCTCCTACGTGACTGTTATCCTCATTGCTCCTGATGCAACTCTAGGTGACACATTCCGTGGATTCTGGCTCGCGCTCTATGCCACTATCCAGAGCGTCGGGCCGGCTGCCTTGAGCCTCTGGCTTATTGGACCAGCTCGCCTTTCTAGCAGCACGACGGCTCTGGCTGTCGGTCTGGCAGCATTTGTAGTGGTTCTGCCTGGAGAAGCTACTCACTTGGTGTCCAAGCGCATAGCCTTGGGACAGATTGTGATTATGTACGCCATCATGCACCCTGTGCACGTGGCAGCGAGTACGGCAGTTGGGGTCTTGGCTAGTGTTCTGGCGTTGTTAATTCCATTCCCACGCTTGGCTTGTCGAGAGGTTAAACATAACTCGAAGCTGCTTGTGGAGAATGCTTCAGAGAGGATGAAGCTCTTTGTGAAGGCTTTTTGTGCAAAAGATAACGCATCCGCGCTTGCTTCAATTTCTCAAACAAAGTCCTTGGCTTCCACTGCAACCAAGCTTATCCAAACCATCAAATGCCACCAAGAAAGCATGCAATGGGAGAGATTTCCACTAAAAATTTTGAGCCAAGGCAATGTCAATCCAGGAGATAGATTGCAAGGTCTGGAGATTCCCCTAAAAGGGATGGAAATGGCATTGAGTAGTACTCCTTCATTCCCAGTTGGGGTAGTGGATGGAGAGCTCAAAAGTGGTCTACTTAAACTAGTAGAGGAGCAAATGAGCTTACATAGAAGCATTCCTTGTGAAGATGCAATAACTGCTGAATCAAAACCAGAAATTGATATTATTCTCCTTCATGGAAATTTATTAGCCACATGTTCTGTCACTACCGCACAGGACAAGTTGGTAATTCCTCAAAAACAAGAAGCAATTACTTCATGTAAGCAAAGTGTGATATGGAGTAACTTCTCCATGAAGGTAAGTAGCAAAAGGGTTATGGCAGCTTTCAAGTGCTCACTTTCATTGGGTCTAGCTGTGTTCTTGGGCTTACTATTCAGCAAAGAAAATGGCCATTGGTCGGGGCTCTCAGTTGCTATCAGTTTAGCGGCAGCTAGAGAAGCAACATTTAAAGTTGCAAATGTCAAAGCACAAGGGACTGTTTTGGGCAGTGTATATGGTGTTATTGGTTGTTTTCTGTTCCAAAGGATCTTACTGGTTAGGCTTTTATCTCTAATTCCTTGGTTCATTTTCACCAGTTTTCTTCAGAGAAGCAAACTGTATGGCCAAGCTGGTGGTATTTCTGCAGTAATTGGTGCTGTACTAATTTTGGGCAGAATAAATTTTGGACCTCCAAGTGAATTCGCCATGGCAAGAATCACAGAAACCTTCATTGGGCTATCATCAACGATTATTGTTGAGCTTCTGTTGCAACCCACAAGAGCTTCCGCTCTTGCGAAAGTTCAACTCTCTAGGACTCTTGGGGCATTGCATGAGTGTATTAACTCAGTGAGTCTTCAAACTGGAAGAGCACAATTGGAAGATAACCAAAAGTGTCTCAAAATTCATGTTGAAGAATTGGGGAAGCTCATTGCAGAAGCCGATGTGGAGCCTAATTTCTGGTTCTTGCCTTTTCACAGCGCTTCTTATGGAAAGCTCATGAGTTCTATCTCCAAAATGATGGAACTCCTAGTTTTTAGTGGTCATGCAATTGGAGTTCTTGAACAAAATTCACAGGGACTTGATGGTTCTTGGAAAGGCATTGTGCATACAATGGAATGTGATCTTGAACTTTTCAAGAAGATGGTTGGCCCTTTGATAAGTTTCTTTAAGGAGATCGCCCTGATCAAGTCAGTAACAGTTCTTGAGAGGGAAGGGCTTGATGATCAAGAAAATGCCAAATCTTGTGATCTTGAGCTGGGAAAACCGCAAACCCTAAATGTTTATAGGGCATGTGGTTTAGAGGATGAAGAGATTGAAAAGATTGTAAGTTCTTATCTCCTACACTCAAAGGAAATTGTTGATAAAATTCCTTGTCAGCAAAGTGAGGAGCTCAAGGGCCAAATTGTTTTATGTTTGAGTGCTTTAGGATTCTGCATCAGTGGTTTGATAGGAGCAACAAGAGAGATAGAAGAGGGAATCAAACAACTTGTTCGATGGGAGAATCCTTCAAGCCATGTTAGTTTGTATGAAATCTCTTGTAAGATGCATGCTTTACAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FUSC_2

Protein Analysis

773

Amino Acids

83.95

Weight (kDa)

8.29

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FUSC	PF04632	368 - 550	2e-06	Fusaric acid resistance protein family
FUSC_2	PF13515	377 - 504	9.8e-13	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28780
fragaria_vesca	FvH4_3g35590 FvH4_3g35590
malus_domestica	MD03G1096700.v1.1 MD11G1142900.v1.1
prunus_persica	Prupe.6G081000_v2.0.a1
pyrus_communis	pycom03g07990
rosa_chinensis	RchiOBHm_Chr5g0063771
rosa_laevigata	RLG00000035612 RLG00000035669 RLG00000035670
rosa_multiflora	Rmu_sc0005685.1_g000022 Rmu_sc0005685.1_g000032 Rmu_ssc0000309.1_g000027
rosa_roxburghii	Rroxscaffold_1G00017070
rosa_rugosa	Rorug05G0359500 Rorug05G0359800
rosa_samantha	Rh5AG418300 Rh5BG433400 Rh5BG433900 Rh5CG456600 Rh5CG457100 Rh5DG447000 Rh5DG447200
rosa_wichuraiana	Rw5G039280 Rw5G039290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	77, 1547
AccI	GTMKAC	1 cut(s)	853
AccII	CGCG	2 cut(s)	227, 608
AciI	CCGC	6 cut(s)	75, 606, 990, 1205, 1545, 2024
AclWI	GGATC	1 cut(s)	1313
AcoI	YGGCCR	2 cut(s)	1168, 1381
AcsI	RAATTY	7 cut(s)	717, 961, 1438, 1457, 1659, 1825, 2124
AcuI	CTGAAG	2 cut(s)	537, 1346
AcvI	CACGTG	1 cut(s)	436
AdeI	CACNNNGTG	2 cut(s)	373, 430
AfaI	GTAC	4 cut(s)	413, 448, 805, 1419
AfeI	AGCGCT	1 cut(s)	1738
AfiI	CCNNNNNNNGG	6 cut(s)	502, 779, 780, 823, 1177, 1491
AflIII	ACRYGT	1 cut(s)	974
AhlI	ACTAGT	1 cut(s)	862
AjnI	CCWGG	2 cut(s)	352, 742
AjuI	GAANNNNNNNTTGG	2 cut(s)	1473, 1505
Alw21I	GWGCWC	5 cut(s)	435, 843, 1115, 1630, 2151
Alw26I	GTCTC	1 cut(s)	1658
Alw44I	GTGCAC	1 cut(s)	431
AlwI	GGATC	1 cut(s)	1313
Ama87I	CYCGRG	1 cut(s)	33
Aor51HI	AGCGCT	1 cut(s)	1738
AoxI	GGCC	6 cut(s)	115, 254, 1168, 1381, 1906, 2155
ApaLI	GTGCAC	1 cut(s)	431
ApeKI	GCWGC	7 cut(s)	260, 303, 332, 440, 535, 1100, 1208
ApoI	RAATTY	7 cut(s)	717, 961, 1438, 1457, 1659, 1825, 2124
AspLEI	GCGC	4 cut(s)	229, 384, 610, 1739
AspS9I	GGNCC	6 cut(s)	116, 254, 284, 1445, 1907, 2155
AsuHPI	GGTGA	3 cut(s)	94, 212, 1342
AvaI	CYCGRG	1 cut(s)	33
AvaII	GGWCC	2 cut(s)	284, 1445
BaeGI	GKGCMC	2 cut(s)	34, 435
BalI	TGGCCA	2 cut(s)	1170, 1383
BanII	GRGCYC	3 cut(s)	843, 1185, 2151
BarI	GAAGNNNNNNTAC	2 cut(s)	793, 825
BbrPI	CACGTG	1 cut(s)	436
BbsI	GAAGAC	1 cut(s)	1604
Bbv12I	GWGCWC	5 cut(s)	435, 843, 1115, 1630, 2151
BbvI	GCAGC	7 cut(s)	247, 315, 344, 452, 522, 1112, 1220
BccI	CCATC	9 cut(s)	107, 425, 677, 778, 827, 1771, 1835, 1894, 2247
BceAI	ACGGC	3 cut(s)	130, 327, 465
BciT130I	CCWGG	2 cut(s)	354, 744
BclI	TGATCA	2 cut(s)	1941, 1981
BcoDI	GTCTC	1 cut(s)	1658
BcuI	ACTAGT	1 cut(s)	862
BfmI	CTRYAG	1 cut(s)	1401
BfoI	RGCGCY	1 cut(s)	1740
BisI	GCNGC	8 cut(s)	261, 304, 333, 441, 536, 1101, 1206, 1209
BlsI	GCNGC	8 cut(s)	262, 305, 334, 442, 537, 1102, 1207, 1210
BmcAI	AGTACT	1 cut(s)	805
Bme1390I	CCNGG	2 cut(s)	354, 744
Bme18I	GGWCC	2 cut(s)	284, 1445
BmeT110I	CYCGRG	1 cut(s)	33
BmgT120I	GGNCC	6 cut(s)	116, 254, 284, 1445, 1907, 2155
BmiI	GGNNCC	1 cut(s)	1707
BmrFI	CCNGG	2 cut(s)	354, 744
BmrI	ACTGGG	1 cut(s)	812
BmsI	GCATC	5 cut(s)	178, 611, 898, 2202, 2292
BmuI	ACTGGG	1 cut(s)	812
BpiI	GAAGAC	1 cut(s)	1604
BplI	GAGNNNNNCTC	2 cut(s)	790, 822
BpmI	CTGGAG	2 cut(s)	375, 785
BpuEI	CTTGAG	4 cut(s)	286, 1982, 2030, 2135
BsaAI	YACGTR	2 cut(s)	163, 436
BsaJI	CCNNGG	6 cut(s)	211, 390, 636, 727, 1337, 1464
Bsc4I	CCNNNNNNNGG	6 cut(s)	502, 779, 780, 823, 1177, 1491
Bse118I	RCCGGY	1 cut(s)	256
Bse1I	ACTGG	4 cut(s)	818, 1317, 1353, 1624
Bse3DI	GCAATG	5 cut(s)	177, 701, 739, 1583, 1686
BseBI	CCWGG	2 cut(s)	354, 744
BseDI	CCNNGG	6 cut(s)	211, 390, 636, 727, 1337, 1464
BseGI	GGATG	5 cut(s)	567, 602, 789, 838, 2068
BseLI	CCNNNNNNNGG	6 cut(s)	502, 779, 780, 823, 1177, 1491
BseMI	GCAATG	5 cut(s)	177, 701, 739, 1583, 1686
BseMII	CTCAG	2 cut(s)	1200, 1617
BseNI	ACTGG	4 cut(s)	818, 1317, 1353, 1624
BseRI	GAGGAG	2 cut(s)	884, 2159
BseSI	GKGCMC	2 cut(s)	34, 435
BseXI	GCAGC	7 cut(s)	247, 315, 344, 452, 522, 1112, 1220
BseYI	CCCAGC	1 cut(s)	2014
Bsh1236I	CGCG	2 cut(s)	227, 608
Bsh1285I	CGRYCG	1 cut(s)	28
BshFI	GGCC	6 cut(s)	117, 256, 1170, 1383, 1908, 2157
BsiEI	CGRYCG	1 cut(s)	28
BsiHKAI	GWGCWC	5 cut(s)	435, 843, 1115, 1630, 2151
BsiHKCI	CYCGRG	1 cut(s)	33
BsiSI	CCGG	1 cut(s)	257
BslFI	GGGAC	3 cut(s)	408, 1267, 1848
BslI	CCNNNNNNNGG	6 cut(s)	502, 779, 780, 823, 1177, 1491
BsmAI	GTCTC	1 cut(s)	1658
BsmFI	GGGAC	3 cut(s)	408, 1267, 1848
BsmI	GAATGC	2 cut(s)	553, 894
BsnI	GGCC	6 cut(s)	117, 256, 1170, 1383, 1908, 2157
BsoBI	CYCGRG	1 cut(s)	33
Bsp1286I	GDGCHC	7 cut(s)	34, 435, 843, 1115, 1185, 1630, 2151
Bsp143I	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
Bsp19I	CCATGG	1 cut(s)	1464
BspACI	CCGC	6 cut(s)	75, 606, 990, 1205, 1545, 2024
BspANI	GGCC	6 cut(s)	117, 256, 1170, 1383, 1908, 2157
BspCNI	CTCAG	2 cut(s)	1199, 1616
BspFNI	CGCG	2 cut(s)	227, 608
BspHI	TCATGA	1 cut(s)	1755
BspLI	GGNNCC	1 cut(s)	1707
BspMAI	CTGCAG	1 cut(s)	1405
BspPI	GGATC	1 cut(s)	1313
BspQI	GCTCTTC	1 cut(s)	1618
BsrBI	CCGCTC	2 cut(s)	77, 1547
BsrDI	GCAATG	5 cut(s)	177, 701, 739, 1583, 1686
BsrFI	RCCGGY	1 cut(s)	256
BsrI	ACTGG	4 cut(s)	818, 1317, 1353, 1624
BssAI	RCCGGY	1 cut(s)	256
BssECI	CCNNGG	6 cut(s)	211, 390, 636, 727, 1337, 1464
BssMI	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
BssT1I	CCWWGG	5 cut(s)	390, 636, 727, 1337, 1464
Bst2UI	CCWGG	2 cut(s)	354, 744
Bst4CI	ACNGT	5 cut(s)	29, 169, 1258, 1377, 1957
Bst6I	CTCTTC	3 cut(s)	1618, 2061, 2223
BstAPI	GCANNNNNTGC	2 cut(s)	430, 917
BstBAI	YACGTR	2 cut(s)	163, 436
BstC8I	GCNNGC	7 cut(s)	85, 225, 258, 292, 612, 692, 2307
BstDEI	CTNAG	2 cut(s)	1186, 1603
BstDSI	CCRYGG	2 cut(s)	211, 1464
BstF5I	GGATG	5 cut(s)	567, 602, 789, 838, 2068
BstFNI	CGCG	2 cut(s)	227, 608
BstH2I	RGCGCY	1 cut(s)	1740
BstHHI	GCGC	4 cut(s)	229, 384, 610, 1739
BstKTI	GATC	6 cut(s)	1308, 1882, 1935, 1944, 1984, 2008
BstMAI	GTCTC	1 cut(s)	1658
BstMBI	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
BstMCI	CGRYCG	1 cut(s)	28
BstNI	CCWGG	2 cut(s)	354, 744
BstNSI	RCATGY	5 cut(s)	54, 694, 978, 2052, 2309
BstSCI	CCNGG	2 cut(s)	352, 742
BstSFI	CTRYAG	1 cut(s)	1401
BstSLI	GKGCMC	2 cut(s)	34, 435
BstUI	CGCG	2 cut(s)	227, 608
BstV1I	GCAGC	7 cut(s)	247, 315, 344, 452, 522, 1112, 1220
BstV2I	GAAGAC	1 cut(s)	1604
BstX2I	RGATCY	1 cut(s)	1305
BstXI	CCANNNNNNTGG	2 cut(s)	1391, 1777
BstYI	RGATCY	1 cut(s)	1305
BsuRI	GGCC	6 cut(s)	117, 256, 1170, 1383, 1908, 2157
BtgI	CCRYGG	2 cut(s)	211, 1464
BtsCI	GGATG	5 cut(s)	567, 602, 789, 838, 2068
BtsI	GCAGTG	2 cut(s)	645, 1273
BtsIMutI	CAGTG	4 cut(s)	645, 1273, 1611, 2203
Cac8I	GCNNGC	7 cut(s)	85, 225, 258, 292, 612, 692, 2307
CciI	TCATGA	1 cut(s)	1755
CfoI	GCGC	4 cut(s)	229, 384, 610, 1739
Cfr10I	RCCGGY	1 cut(s)	256
Cfr13I	GGNCC	6 cut(s)	116, 254, 284, 1445, 1907, 2155
CseI	GACGC	1 cut(s)	238
Csp6I	GTAC	4 cut(s)	412, 447, 804, 1418
CviQI	GTAC	4 cut(s)	412, 447, 804, 1418
DdeI	CTNAG	2 cut(s)	1186, 1603
DpnI	GATC	6 cut(s)	1307, 1881, 1934, 1943, 1983, 2007
DpnII	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
DraI	TTTAAA	1 cut(s)	1228
DraIII	CACNNNGTG	2 cut(s)	373, 430
EaeI	YGGCCR	2 cut(s)	1168, 1381
Eam1104I	CTCTTC	3 cut(s)	1618, 2061, 2223
EarI	CTCTTC	3 cut(s)	1618, 2061, 2223
Ecl136II	GAGCTC	2 cut(s)	841, 2149
Eco130I	CCWWGG	5 cut(s)	390, 636, 727, 1337, 1464
Eco24I	GRGCYC	3 cut(s)	843, 1185, 2151
Eco47I	GGWCC	2 cut(s)	284, 1445
Eco47III	AGCGCT	1 cut(s)	1738
Eco53kI	GAGCTC	2 cut(s)	841, 2149
Eco57I	CTGAAG	2 cut(s)	537, 1346
Eco72I	CACGTG	1 cut(s)	436
Eco88I	CYCGRG	1 cut(s)	33
EcoICRI	GAGCTC	2 cut(s)	841, 2149
EcoRI	GAATTC	1 cut(s)	1457
EcoRII	CCWGG	2 cut(s)	352, 742
EcoT14I	CCWWGG	5 cut(s)	390, 636, 727, 1337, 1464
EcoT22I	ATGCAT	1 cut(s)	2307
EcoT38I	GRGCYC	3 cut(s)	843, 1185, 2151
ErhI	CCWWGG	5 cut(s)	390, 636, 727, 1337, 1464
FalI	AAGNNNNNCTT	2 cut(s)	883, 915
FaqI	GGGAC	3 cut(s)	408, 1267, 1848
FbaI	TGATCA	2 cut(s)	1941, 1981
FblI	GTMKAC	1 cut(s)	853
Fnu4HI	GCNGC	8 cut(s)	261, 304, 333, 441, 536, 1101, 1206, 1209
FokI	GGATG	5 cut(s)	574, 589, 796, 845, 2075
FriOI	GRGCYC	3 cut(s)	843, 1185, 2151
Fsp4HI	GCNGC	8 cut(s)	261, 304, 333, 441, 536, 1101, 1206, 1209
GlaI	GCGC	4 cut(s)	228, 383, 609, 1738
GluI	GCNGC	8 cut(s)	261, 304, 333, 441, 536, 1101, 1206, 1209
GsaI	CCCAGC	1 cut(s)	2018
GsuI	CTGGAG	2 cut(s)	375, 785
HaeII	RGCGCY	1 cut(s)	1740
HaeIII	GGCC	6 cut(s)	117, 256, 1170, 1383, 1908, 2157
HapII	CCGG	1 cut(s)	257
HgaI	GACGC	1 cut(s)	238
HhaI	GCGC	4 cut(s)	229, 384, 610, 1739
Hin6I	GCGC	4 cut(s)	227, 382, 608, 1737
HinP1I	GCGC	4 cut(s)	227, 382, 608, 1737
HindIII	AAGCTT	1 cut(s)	656
HinfI	GANTC	9 cut(s)	216, 769, 923, 1473, 1573, 1609, 2187, 2235, 2260
HpaII	CCGG	1 cut(s)	257
HphI	GGTGA	3 cut(s)	94, 212, 1342
Hpy166II	GTNNAC	2 cut(s)	433, 854
Hpy188I	TCNGA	4 cut(s)	71, 131, 556, 1365
Hpy8I	GTNNAC	2 cut(s)	433, 854
Hpy99I	CGWCG	2 cut(s)	254, 313
HpyAV	CCTTC	9 cut(s)	76, 129, 571, 819, 962, 1069, 1495, 1964, 2274
HpyCH4III	ACNGT	5 cut(s)	29, 169, 1258, 1377, 1957
HpyCH4IV	ACGT	2 cut(s)	162, 435
HpyF3I	CTNAG	2 cut(s)	1186, 1603
HpySE526I	ACGT	2 cut(s)	162, 435
HspAI	GCGC	4 cut(s)	227, 382, 608, 1737
KroI	GCCGGC	1 cut(s)	256
KroNI	GCCGGC	1 cut(s)	258
Ksp22I	TGATCA	2 cut(s)	1941, 1981
Kzo9I	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
LguI	GCTCTTC	1 cut(s)	1618
LmnI	GCTCC	5 cut(s)	187, 871, 1705, 2146, 2210
Lsp1109I	GCAGC	7 cut(s)	247, 315, 344, 452, 522, 1112, 1220
LweI	GCATC	5 cut(s)	178, 611, 898, 2202, 2292
MaeII	ACGT	2 cut(s)	162, 435
MaeIII	GTNAC	5 cut(s)	163, 200, 982, 1061, 1951
MalI	GATC	6 cut(s)	1307, 1881, 1934, 1943, 1983, 2007
MbiI	CCGCTC	2 cut(s)	77, 1547
MboI	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
MboII	GAAGA	9 cut(s)	917, 1352, 1604, 1635, 1649, 1682, 1909, 2078, 2240
MfeI	CAATTG	2 cut(s)	1631, 1806
MflI	RGATCY	1 cut(s)	1305
MhlI	GDGCHC	7 cut(s)	34, 435, 843, 1115, 1185, 1630, 2151
MlsI	TGGCCA	2 cut(s)	1170, 1383
MluNI	TGGCCA	2 cut(s)	1170, 1383
MlyI	GAGTC	2 cut(s)	1567, 1618
Mox20I	TGGCCA	2 cut(s)	1170, 1383
Mph1103I	ATGCAT	1 cut(s)	2307
MroNI	GCCGGC	1 cut(s)	256
MscI	TGGCCA	2 cut(s)	1170, 1383
MseI	TTAA	6 cut(s)	485, 519, 858, 1227, 1599, 1926
Msp20I	TGGCCA	2 cut(s)	1170, 1383
MspI	CCGG	1 cut(s)	257
MspR9I	CCNGG	2 cut(s)	354, 744
MunI	CAATTG	2 cut(s)	1631, 1806
Mva1269I	GAATGC	2 cut(s)	553, 894
MvaI	CCWGG	2 cut(s)	354, 744
MvnI	CGCG	2 cut(s)	227, 608
NaeI	GCCGGC	1 cut(s)	258
NcoI	CCATGG	1 cut(s)	1464
NdeII	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
NgoMIV	GCCGGC	1 cut(s)	256
NlaIV	GGNNCC	1 cut(s)	1707
NmuCI	GTSAC	3 cut(s)	163, 200, 982
NsiI	ATGCAT	1 cut(s)	2307
NspI	RCATGY	5 cut(s)	54, 694, 978, 2052, 2309
PaeI	GCATGC	2 cut(s)	694, 2309
PagI	TCATGA	1 cut(s)	1755
PciI	ACATGT	1 cut(s)	974
PciSI	GCTCTTC	1 cut(s)	1618
PctI	GAATGC	2 cut(s)	553, 894
PdiI	GCCGGC	1 cut(s)	258
PfeI	GAWTC	7 cut(s)	216, 769, 923, 1473, 2187, 2235, 2260
PfoI	TCCNGGA	1 cut(s)	742
PkrI	GCNGC	8 cut(s)	262, 305, 334, 442, 537, 1102, 1207, 1210
PleI	GAGTC	2 cut(s)	1567, 1617
PmaCI	CACGTG	1 cut(s)	436
PmlI	CACGTG	1 cut(s)	436
PpsI	GAGTC	2 cut(s)	1567, 1617
Ppu21I	YACGTR	2 cut(s)	163, 436
PscI	ACATGT	1 cut(s)	974
Psp124BI	GAGCTC	2 cut(s)	843, 2151
Psp6I	CCWGG	2 cut(s)	352, 742
PspCI	CACGTG	1 cut(s)	436
PspFI	CCCAGC	1 cut(s)	2014
PspGI	CCWGG	2 cut(s)	352, 742
PspN4I	GGNNCC	1 cut(s)	1707
PspPI	GGNCC	6 cut(s)	116, 254, 284, 1445, 1907, 2155
PstI	CTGCAG	1 cut(s)	1405
PsuI	RGATCY	1 cut(s)	1305
RsaI	GTAC	4 cut(s)	413, 448, 805, 1419
RsaNI	GTAC	4 cut(s)	412, 447, 804, 1418
SacI	GAGCTC	2 cut(s)	843, 2151
SapI	GCTCTTC	1 cut(s)	1618
SaqAI	TTAA	6 cut(s)	485, 519, 858, 1227, 1599, 1926
SatI	GCNGC	8 cut(s)	261, 304, 333, 441, 536, 1101, 1206, 1209
Sau3AI	GATC	6 cut(s)	1305, 1879, 1932, 1941, 1981, 2005
Sau96I	GGNCC	6 cut(s)	116, 254, 284, 1445, 1907, 2155
ScaI	AGTACT	1 cut(s)	805
SchI	GAGTC	2 cut(s)	1567, 1618
ScrFI	CCNGG	2 cut(s)	354, 744
SduI	GDGCHC	7 cut(s)	34, 435, 843, 1115, 1185, 1630, 2151
SfaNI	GCATC	5 cut(s)	178, 611, 898, 2202, 2292
SfcI	CTRYAG	1 cut(s)	1401
SinI	GGWCC	2 cut(s)	284, 1445
SmlI	CTYRAG	5 cut(s)	12, 265, 1961, 2009, 2150
SmoI	CTYRAG	5 cut(s)	12, 265, 1961, 2009, 2150
SpeI	ACTAGT	1 cut(s)	862
SphI	GCATGC	2 cut(s)	694, 2309
SsiI	CCGC	6 cut(s)	75, 606, 990, 1205, 1545, 2024
SstI	GAGCTC	2 cut(s)	843, 2151
StyD4I	CCNGG	2 cut(s)	352, 742
StyI	CCWWGG	5 cut(s)	390, 636, 727, 1337, 1464
TaaI	ACNGT	5 cut(s)	29, 169, 1258, 1377, 1957
TaiI	ACGT	2 cut(s)	165, 438
TaqI	TCGA	4 cut(s)	62, 511, 530, 2251
TaqII	GACCGA	1 cut(s)	314
TatI	WGTACW	2 cut(s)	803, 1417
TauI	GCSGC	1 cut(s)	1208
TfiI	GAWTC	7 cut(s)	216, 769, 923, 1473, 2187, 2235, 2260
Tru1I	TTAA	6 cut(s)	485, 519, 858, 1227, 1599, 1926
Tru9I	TTAA	6 cut(s)	485, 519, 858, 1227, 1599, 1926
TscAI	CASTG	4 cut(s)	652, 1273, 1611, 2203
TseFI	GTSAC	3 cut(s)	163, 200, 982
TseI	GCWGC	7 cut(s)	260, 303, 332, 440, 535, 1100, 1208
Tsp45I	GTSAC	3 cut(s)	163, 200, 982
TspGWI	ACGGA	1 cut(s)	200
TspRI	CASTG	4 cut(s)	652, 1273, 1611, 2203
VneI	GTGCAC	1 cut(s)	431
VpaK11BI	GGWCC	2 cut(s)	284, 1445
XapI	RAATTY	7 cut(s)	717, 961, 1438, 1457, 1659, 1825, 2124
XceI	RCATGY	5 cut(s)	54, 694, 978, 2052, 2309
XmiI	GTMKAC	1 cut(s)	853
ZrmI	AGTACT	1 cut(s)	805
Zsp2I	ATGCAT	1 cut(s)	2307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.