Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006479

Physical Location & Seq

Genomic Coordinates Reverse (-)

69786803 .. 69798845

Gene Structure 12043 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG433900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGGCAACCTCTCAAGACCAAACTAACCGTGCCCGAGCCTTGTGGCTCACATGCCTAGCTTCGGCCTTCCGAACCACTCTAGCTTGCACCATAGTAGCCATCACCACCCTCTACGGCCCTCCCTCTCTCCGACACCAAGTAGCCTTGCCGGCATTCTCCTACGTGACTGTTATCCTCATTGCTCCTGATGCAACTCTAGGTGACACGATCCGTGGATTCTGGCTCGCCCTCTACGCCACTATTCAGAGCGTCGGGCCGGCTATCTTGAGCCTCTGGCTGATTGGACCGGCCCGCCTTTCAAGCAGCACAACGGCTCTAGCCGTTGGTCTGGCGGCATTTGTGGCGGTTCTGCCCGGAGAGGCCACTCATTTGGTGTCCAAGCGCATAGCCTTGGGACAGATTGTGCTTGTGTACGTGATTGCTTTCATAAAGGGTGGGAGTACGGACGCCATCATGCACCCTGTGCACGTGGCGGCGAGTACGGCCGTTGGGGTCTTGGCTTGTGTTCTGGCTTTGTTAGTTCCATTCCCACGCTTGGCTTGTCGAGAGGTTAAACAGAACTCAAAGCTGCTTGTGGAAAATGCTTCGGAGAGGCTCAAGCTCTTTGTGAAGGCTTTTTGTGCAGAAGATAACGCATCCGCACTTGCTTCAATTTCTCAAACAAAGTCCTTGGCTTCCACAGCAACCAAGCTTTTCCAAACCATCAAACGCCACCAGGAAAGCATGCAATGGGAAAGACTTCCACTACAATTTTTGAGAGACAGCAATGTCAATCCAGGAGATAGATTGCAAGGTTTGGAGATTCCCTTAATAGGAATGGAAATGGCATTGAGAAGTACTCCTTCATTCCCAGTTGGGGTAGTGGATGGACAGCTCAAAAGTGGTCTACTTAAACTAGTAGAGGAGCAACTGAGCTTAAATAGAAGCATTCTTTGTGAAGATGCAATAACTGTTCCTGAATCAAAACCAGAAATTGATATTAGGTGCCTCCAAACACTTCAAACCATCCCACAAACCCACCAGGATTTACCCCCATTTTTCTTTTTGTTTTGTACAAGTCTCCTTCATGGAAATTTATCAGCCACAAGTTCTGGTACTACTGCACAGGACAAATTGGTAATTCACCAAAAACAAGAAGCAGTTACTTCATGTAAACAAAGTGTGATATGGAGTAACCTCTCCATAAAGGTAAGTAGCAAAATGGTTATGGCAGCTTTCAAATGCTCAATTTCATTGGGTCTAGCTGTGTTCTTTGGCTTGATATTCAGCAAAGAAAATGGCTATTGGTCAGGGCTCCCAGTGGCTATCAGTTTCGCTGCTGCTAGAGAAGCAACATTTAAAGTTGCAAATGTTAAAGCACAAGGGACTGTTTTGGGCACTGTATATGGAGTATTTGGTAGTTTTCTGTTCCAAAGGGTCTTACCCATTAGACTCTTATCTCTAATTCCTTGGTTCATTTTCACCAGTTTTCTTCAGAGAAGCAAAATGTATGGCCATGCTGGTGGTATTTCTGCAGTAATTGGAGCTGTACTAATTTTGGGCAGAACAAACTTTGGAGCTCCAAGTGAATTTGCCATAGCAAGAATCACAGAAACCTTCATAGGGTTGTCGTCATCGATTATTGTCGAGCTATTGTTGCAACCCACAAGAGCTTCCACTCTTGCAAAAGTTCAACTATCTAGGACTCTTGGGGCATTGCATGAATGTATTGACTCAGTGAGTCTTCAATCTGGAAGAGCACAATTGGAAGATAACCAGAAGTGTCTGAAAATTCATGTTGAAGAATTGGGGAAGCTCATTGCAGAAGCCAATGTGGAGCCTAATTTCTGGTTCTTTCCTTTTCACAGTGCTTGTTATGGAAAACTCATCAGTTCGATCTCCAAAATGATGGAACTCCTAGTTTTCAGTGGTCATGCAATTGGAGCTATTGAACAGAATTCTCAAATACTTGAGAGTTCTTGGAAAGGCATCATGCATACAATGGAATGTGATCTCGAACTTTTCAAGAAGATGGTTGGCTCTTTGATAAGTTGCTTCAAGGAGATCACCCTGATAAAGTCGGTAACTGTTCTTGAGAAGGAAGGGCTTGATGATCAAGAAAGTGCCAAATCTTGTGATCTGGAGTTGGGAAAACGGAAAATTCTAAATGCTTTTAGGGTTTGTGGTTTAGAGGATGAAGAGATGGATAAGATTGTGAGTTCTTATCTCCTACACTCAAAGGAAGTTGTTGATGAAATTCGTTGTCAGCAAAGTGAGGAACTCAAGGGCCAAATCGTTTTATGTTTGAGTGCTTTAGGGTTCTGCATAAGTGGTTTGATGAGAGCAACAAGGGAGATAGAAGAGGGAATCAAAGAACTCGTTCAATGGGAGAATCCTTCGAGCCACGTTAATTTGTACGAAATCTCTGAACTGGAGCCAAGGGGAAGAGAAGCATTTGGGTCTCGTTTTGATCAGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FUSC_2

Protein Analysis

819

Amino Acids

89.48

Weight (kDa)

7.5

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FUSC	PF04632	405 - 601	1e-06	Fusaric acid resistance protein family
FUSC_2	PF13515	414 - 542	1.1e-11	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28780
fragaria_vesca	FvH4_3g35590 FvH4_3g35590
malus_domestica	MD03G1096700.v1.1 MD11G1142900.v1.1
prunus_persica	Prupe.6G081000_v2.0.a1
pyrus_communis	pycom03g07990
rosa_chinensis	RchiOBHm_Chr5g0063771
rosa_laevigata	RLG00000035612 RLG00000035669 RLG00000035670
rosa_multiflora	Rmu_sc0005685.1_g000022 Rmu_sc0005685.1_g000032 Rmu_ssc0000309.1_g000027
rosa_roxburghii	Rroxscaffold_1G00017070
rosa_rugosa	Rorug05G0359500 Rorug05G0359800
rosa_samantha	Rh5AG418300 Rh5BG433400 Rh5BG433900 Rh5CG456600 Rh5CG457100 Rh5DG447000 Rh5DG447200
rosa_wichuraiana	Rw5G039280 Rw5G039290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	767
AccB1I	GGYRCC	1 cut(s)	984
AccI	GTMKAC	1 cut(s)	886
AciI	CCGC	5 cut(s)	292, 332, 344, 473, 639
AclWI	GGATC	1 cut(s)	202
AcoI	YGGCCR	2 cut(s)	483, 1492
AcsI	RAATTY	6 cut(s)	1072, 1568, 1770, 1936, 2139, 2235
AcuI	CTGAAG	1 cut(s)	1457
AcvI	CACGTG	1 cut(s)	469
AcyI	GRCGYC	1 cut(s)	447
AdeI	CACNNNGTG	1 cut(s)	463
AfaI	GTAC	8 cut(s)	413, 442, 481, 838, 1054, 1096, 1530, 2396
AfiI	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1602
AhlI	ACTAGT	1 cut(s)	895
AjnI	CCWGG	3 cut(s)	714, 775, 1020
Alw21I	GWGCWC	3 cut(s)	468, 1561, 1741
Alw26I	GTCTC	3 cut(s)	753, 1064, 2445
Alw44I	GTGCAC	1 cut(s)	464
AlwI	GGATC	1 cut(s)	202
Ama87I	CYCGRG	1 cut(s)	33
AoxI	GGCC	8 cut(s)	63, 115, 254, 288, 360, 483, 1492, 2266
ApaLI	GTGCAC	1 cut(s)	464
ApeKI	GCWGC	5 cut(s)	303, 568, 1211, 1316, 1319
ApoI	RAATTY	6 cut(s)	1072, 1568, 1770, 1936, 2139, 2235
Asp700I	GAANNNNTTC	2 cut(s)	738, 2358
AspLEI	GCGC	1 cut(s)	384
AspS9I	GGNCC	5 cut(s)	116, 254, 284, 289, 2266
AsuC2I	CCSGG	1 cut(s)	354
AsuHPI	GGTGA	5 cut(s)	94, 212, 1115, 1453, 2038
AvaI	CYCGRG	1 cut(s)	33
AvaII	GGWCC	1 cut(s)	284
BaeGI	GKGCMC	3 cut(s)	34, 468, 1379
BalI	TGGCCA	1 cut(s)	1494
BanI	GGYRCC	1 cut(s)	984
BanII	GRGCYC	2 cut(s)	1296, 1561
BbrPI	CACGTG	1 cut(s)	469
BbsI	GAAGAC	1 cut(s)	1715
Bbv12I	GWGCWC	3 cut(s)	468, 1561, 1741
BbvI	GCAGC	5 cut(s)	315, 555, 1223, 1303, 1306
BccI	CCATC	8 cut(s)	107, 458, 710, 860, 1013, 1882, 2005, 2176
BceAI	ACGGC	5 cut(s)	130, 305, 327, 470, 498
BciT130I	CCWGG	3 cut(s)	716, 777, 1022
BclI	TGATCA	2 cut(s)	2092, 2449
BcnI	CCSGG	1 cut(s)	354
BcoDI	GTCTC	3 cut(s)	753, 1064, 2445
BcuI	ACTAGT	1 cut(s)	895
BfaI	CTAG	9 cut(s)	56, 80, 197, 317, 896, 1241, 1323, 1680, 1898
BfmI	CTRYAG	1 cut(s)	1512
BglI	GCCNNNNNGGC	1 cut(s)	149
BisI	GCNGC	7 cut(s)	304, 333, 474, 569, 1212, 1317, 1320
BlsI	GCNGC	7 cut(s)	305, 334, 475, 570, 1213, 1318, 1321
BmcAI	AGTACT	1 cut(s)	838
Bme1390I	CCNGG	4 cut(s)	354, 716, 777, 1022
Bme18I	GGWCC	1 cut(s)	284
BmeT110I	CYCGRG	1 cut(s)	33
BmgT120I	GGNCC	5 cut(s)	116, 254, 284, 289, 2266
BmiI	GGNNCC	4 cut(s)	986, 1295, 1818, 2415
BmrFI	CCNGG	4 cut(s)	354, 716, 777, 1022
BmrI	ACTGGG	2 cut(s)	845, 1292
BmsI	GCATC	4 cut(s)	178, 644, 931, 1977
BmuI	ACTGGG	2 cut(s)	845, 1292
BpiI	GAAGAC	1 cut(s)	1715
BplI	GAGNNNNNCTC	2 cut(s)	823, 855
BpmI	CTGGAG	2 cut(s)	2141, 2432
BpuEI	CTTGAG	5 cut(s)	286, 581, 1970, 2093, 2246
BpuMI	CCSGG	1 cut(s)	354
Bsa29I	ATCGAT	1 cut(s)	1616
BsaAI	YACGTR	3 cut(s)	163, 415, 469
BsaHI	GRCGYC	1 cut(s)	447
BsaI	GGTCTC	1 cut(s)	2445
BsaJI	CCNNGG	5 cut(s)	211, 390, 669, 1448, 2417
Bsc4I	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1602
Bse118I	RCCGGY	3 cut(s)	148, 256, 286
Bse1I	ACTGG	4 cut(s)	851, 1298, 1464, 2415
Bse3DI	GCAATG	5 cut(s)	177, 734, 772, 1694, 1797
BseBI	CCWGG	3 cut(s)	716, 777, 1022
BseCI	ATCGAT	1 cut(s)	1616
BseDI	CCNNGG	5 cut(s)	211, 390, 669, 1448, 2417
BseGI	GGATG	4 cut(s)	635, 871, 1005, 2179
BseLI	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1602
BseMI	GCAATG	5 cut(s)	177, 734, 772, 1694, 1797
BseMII	CTCAG	2 cut(s)	902, 1728
BseNI	ACTGG	4 cut(s)	851, 1298, 1464, 2415
BseRI	GAGGAG	1 cut(s)	917
BseSI	GKGCMC	3 cut(s)	34, 468, 1379
BseX3I	CGGCCG	1 cut(s)	483
BseXI	GCAGC	5 cut(s)	315, 555, 1223, 1303, 1306
BsgI	GTGCAG	2 cut(s)	642, 1086
Bsh1285I	CGRYCG	1 cut(s)	486
BshFI	GGCC	8 cut(s)	65, 117, 256, 290, 362, 485, 1494, 2268
BshNI	GGYRCC	1 cut(s)	984
BshVI	ATCGAT	1 cut(s)	1616
BsiEI	CGRYCG	1 cut(s)	486
BsiHKAI	GWGCWC	3 cut(s)	468, 1561, 1741
BsiHKCI	CYCGRG	1 cut(s)	33
BsiSI	CCGG	4 cut(s)	149, 257, 287, 354
BslFI	GGGAC	2 cut(s)	408, 1378
BslI	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1602
BsmAI	GTCTC	3 cut(s)	753, 1064, 2445
BsmFI	GGGAC	2 cut(s)	408, 1378
BsmI	GAATGC	2 cut(s)	152, 927
BsnI	GGCC	8 cut(s)	65, 117, 256, 290, 362, 485, 1494, 2268
Bso31I	GGTCTC	1 cut(s)	2445
BsoBI	CYCGRG	1 cut(s)	33
Bsp1286I	GDGCHC	6 cut(s)	34, 468, 1296, 1379, 1561, 1741
Bsp1407I	TGTACA	1 cut(s)	1052
Bsp143I	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
BspACI	CCGC	5 cut(s)	292, 332, 344, 473, 639
BspANI	GGCC	8 cut(s)	65, 117, 256, 290, 362, 485, 1494, 2268
BspCNI	CTCAG	2 cut(s)	903, 1727
BspDI	ATCGAT	1 cut(s)	1616
BspLI	GGNNCC	4 cut(s)	986, 1295, 1818, 2415
BspMAI	CTGCAG	1 cut(s)	1516
BspPI	GGATC	1 cut(s)	202
BspQI	GCTCTTC	1 cut(s)	1729
BspT107I	GGYRCC	1 cut(s)	984
BspTNI	GGTCTC	1 cut(s)	2445
BsrDI	GCAATG	5 cut(s)	177, 734, 772, 1694, 1797
BsrFI	RCCGGY	3 cut(s)	148, 256, 286
BsrGI	TGTACA	1 cut(s)	1052
BsrI	ACTGG	4 cut(s)	851, 1298, 1464, 2415
BssAI	RCCGGY	3 cut(s)	148, 256, 286
BssECI	CCNNGG	5 cut(s)	211, 390, 669, 1448, 2417
BssMI	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
BssNI	GRCGYC	1 cut(s)	447
BssT1I	CCWWGG	4 cut(s)	390, 669, 1448, 2417
Bst2UI	CCWGG	3 cut(s)	716, 777, 1022
Bst4CI	ACNGT	7 cut(s)	29, 169, 952, 1369, 1381, 1847, 2068
Bst6I	CTCTTC	4 cut(s)	1729, 2172, 2334, 2419
BstACI	GRCGYC	1 cut(s)	447
BstAPI	GCANNNNNTGC	1 cut(s)	463
BstAUI	TGTACA	1 cut(s)	1052
BstBAI	YACGTR	3 cut(s)	163, 415, 469
BstC8I	GCNNGC	6 cut(s)	85, 150, 225, 258, 292, 725
BstDEI	CTNAG	2 cut(s)	911, 1714
BstDSI	CCRYGG	1 cut(s)	211
BstF5I	GGATG	4 cut(s)	635, 871, 1005, 2179
BstHHI	GCGC	1 cut(s)	384
BstKTI	GATC	7 cut(s)	210, 1878, 1993, 2046, 2095, 2119, 2452
BstMAI	GTCTC	3 cut(s)	753, 1064, 2445
BstMBI	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
BstMCI	CGRYCG	1 cut(s)	486
BstNI	CCWGG	3 cut(s)	716, 777, 1022
BstNSI	RCATGY	2 cut(s)	54, 727
BstSCI	CCNGG	4 cut(s)	352, 714, 775, 1020
BstSFI	CTRYAG	1 cut(s)	1512
BstSLI	GKGCMC	3 cut(s)	34, 468, 1379
BstV1I	GCAGC	5 cut(s)	315, 555, 1223, 1303, 1306
BstV2I	GAAGAC	1 cut(s)	1715
BstXI	CCANNNNNNTGG	3 cut(s)	370, 1502, 1888
BstZI	CGGCCG	1 cut(s)	483
Bsu15I	ATCGAT	1 cut(s)	1616
BsuRI	GGCC	8 cut(s)	65, 117, 256, 290, 362, 485, 1494, 2268
BsuTUI	ATCGAT	1 cut(s)	1616
BtgI	CCRYGG	1 cut(s)	211
BtsCI	GGATG	4 cut(s)	635, 871, 1005, 2179
BtsIMutI	CAGTG	5 cut(s)	1305, 1377, 1722, 1852, 1912
Cac8I	GCNNGC	6 cut(s)	85, 150, 225, 258, 292, 725
CfoI	GCGC	1 cut(s)	384
Cfr10I	RCCGGY	3 cut(s)	148, 256, 286
Cfr13I	GGNCC	5 cut(s)	116, 254, 284, 289, 2266
ClaI	ATCGAT	1 cut(s)	1616
CseI	GACGC	2 cut(s)	238, 455
Csp6I	GTAC	8 cut(s)	412, 441, 480, 837, 1053, 1095, 1529, 2395
CviQI	GTAC	8 cut(s)	412, 441, 480, 837, 1053, 1095, 1529, 2395
DdeI	CTNAG	2 cut(s)	911, 1714
DpnI	GATC	7 cut(s)	209, 1877, 1992, 2045, 2094, 2118, 2451
DpnII	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
DraI	TTTAAA	1 cut(s)	1339
DraIII	CACNNNGTG	1 cut(s)	463
DrdI	GACNNNNNNGTC	1 cut(s)	767
DseDI	GACNNNNNNGTC	1 cut(s)	767
EaeI	YGGCCR	2 cut(s)	483, 1492
EagI	CGGCCG	1 cut(s)	483
Eam1104I	CTCTTC	4 cut(s)	1729, 2172, 2334, 2419
EarI	CTCTTC	4 cut(s)	1729, 2172, 2334, 2419
Ecl136II	GAGCTC	1 cut(s)	1559
EclXI	CGGCCG	1 cut(s)	483
Eco130I	CCWWGG	4 cut(s)	390, 669, 1448, 2417
Eco24I	GRGCYC	2 cut(s)	1296, 1561
Eco31I	GGTCTC	1 cut(s)	2445
Eco47I	GGWCC	1 cut(s)	284
Eco52I	CGGCCG	1 cut(s)	483
Eco53kI	GAGCTC	1 cut(s)	1559
Eco57I	CTGAAG	1 cut(s)	1457
Eco72I	CACGTG	1 cut(s)	469
Eco88I	CYCGRG	1 cut(s)	33
EcoICRI	GAGCTC	1 cut(s)	1559
EcoRI	GAATTC	1 cut(s)	1936
EcoRII	CCWGG	3 cut(s)	714, 775, 1020
EcoT14I	CCWWGG	4 cut(s)	390, 669, 1448, 2417
EcoT22I	ATGCAT	1 cut(s)	1977
EcoT38I	GRGCYC	2 cut(s)	1296, 1561
ErhI	CCWWGG	4 cut(s)	390, 669, 1448, 2417
FalI	AAGNNNNNCTT	2 cut(s)	826, 858
FaqI	GGGAC	2 cut(s)	408, 1378
FauI	CCCGC	1 cut(s)	299
FbaI	TGATCA	2 cut(s)	2092, 2449
FblI	GTMKAC	1 cut(s)	886
Fnu4HI	GCNGC	7 cut(s)	304, 333, 474, 569, 1212, 1317, 1320
FokI	GGATG	4 cut(s)	622, 878, 992, 2186
FriOI	GRGCYC	2 cut(s)	1296, 1561
Fsp4HI	GCNGC	7 cut(s)	304, 333, 474, 569, 1212, 1317, 1320
FspBI	CTAG	9 cut(s)	56, 80, 197, 317, 896, 1241, 1323, 1680, 1898
GlaI	GCGC	1 cut(s)	383
GluI	GCNGC	7 cut(s)	304, 333, 474, 569, 1212, 1317, 1320
GsuI	CTGGAG	2 cut(s)	2141, 2432
HaeIII	GGCC	8 cut(s)	65, 117, 256, 290, 362, 485, 1494, 2268
HapII	CCGG	4 cut(s)	149, 257, 287, 354
HgaI	GACGC	2 cut(s)	238, 455
HhaI	GCGC	1 cut(s)	384
Hin1I	GRCGYC	1 cut(s)	447
Hin6I	GCGC	1 cut(s)	382
HinP1I	GCGC	1 cut(s)	382
HindIII	AAGCTT	1 cut(s)	689
HpaII	CCGG	4 cut(s)	149, 257, 287, 354
HphI	GGTGA	5 cut(s)	94, 212, 1115, 1453, 2038
Hpy166II	GTNNAC	4 cut(s)	412, 466, 887, 1154
Hpy188I	TCNGA	7 cut(s)	71, 131, 246, 589, 1476, 1767, 2407
Hpy8I	GTNNAC	4 cut(s)	412, 466, 887, 1154
Hpy99I	CGWCG	1 cut(s)	254
HpyAV	CCTTC	8 cut(s)	76, 604, 852, 1073, 1606, 2071, 2075, 2385
HpyCH4III	ACNGT	7 cut(s)	29, 169, 952, 1369, 1381, 1847, 2068
HpyCH4IV	ACGT	4 cut(s)	162, 414, 468, 2385
HpyF3I	CTNAG	2 cut(s)	911, 1714
HpySE526I	ACGT	4 cut(s)	162, 414, 468, 2385
Hsp92I	GRCGYC	1 cut(s)	447
HspAI	GCGC	1 cut(s)	382
KroI	GCCGGC	2 cut(s)	148, 256
KroNI	GCCGGC	2 cut(s)	150, 258
Ksp22I	TGATCA	2 cut(s)	2092, 2449
Kzo9I	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
LguI	GCTCTTC	1 cut(s)	1729
LmnI	GCTCC	9 cut(s)	187, 904, 1299, 1523, 1556, 1564, 1816, 1922, 2413
Lsp1109I	GCAGC	5 cut(s)	315, 555, 1223, 1303, 1306
LweI	GCATC	4 cut(s)	178, 644, 931, 1977
MaeI	CTAG	9 cut(s)	56, 80, 197, 317, 896, 1241, 1323, 1680, 1898
MaeII	ACGT	4 cut(s)	162, 414, 468, 2385
MaeIII	GTNAC	5 cut(s)	163, 200, 1141, 1172, 2062
MalI	GATC	7 cut(s)	209, 1877, 1992, 2045, 2094, 2118, 2451
MboI	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
MfeI	CAATTG	2 cut(s)	1742, 1917
MhlI	GDGCHC	6 cut(s)	34, 468, 1296, 1379, 1561, 1741
MlsI	TGGCCA	1 cut(s)	1494
MluNI	TGGCCA	1 cut(s)	1494
MlyI	GAGTC	4 cut(s)	1425, 1678, 1706, 1729
MmeI	TCCRAC	1 cut(s)	154
Mox20I	TGGCCA	1 cut(s)	1494
Mph1103I	ATGCAT	1 cut(s)	1977
MroNI	GCCGGC	2 cut(s)	148, 256
MroXI	GAANNNNTTC	2 cut(s)	738, 2358
MscI	TGGCCA	1 cut(s)	1494
MseI	TTAA	7 cut(s)	552, 809, 891, 917, 1338, 1353, 2388
MslI	CAYNNNNRTG	1 cut(s)	1500
Msp20I	TGGCCA	1 cut(s)	1494
MspI	CCGG	4 cut(s)	149, 257, 287, 354
MspR9I	CCNGG	4 cut(s)	354, 716, 777, 1022
MunI	CAATTG	2 cut(s)	1742, 1917
Mva1269I	GAATGC	2 cut(s)	152, 927
MvaI	CCWGG	3 cut(s)	716, 777, 1022
NaeI	GCCGGC	2 cut(s)	150, 258
NciI	CCSGG	1 cut(s)	354
NdeII	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
NgoMIV	GCCGGC	2 cut(s)	148, 256
NlaIV	GGNNCC	4 cut(s)	986, 1295, 1818, 2415
NmuCI	GTSAC	2 cut(s)	163, 200
NsiI	ATGCAT	1 cut(s)	1977
NspI	RCATGY	2 cut(s)	54, 727
PaeI	GCATGC	1 cut(s)	727
PciSI	GCTCTTC	1 cut(s)	1729
PctI	GAATGC	2 cut(s)	152, 927
PdiI	GCCGGC	2 cut(s)	150, 258
PdmI	GAANNNNTTC	2 cut(s)	738, 2358
PfeI	GAWTC	6 cut(s)	216, 802, 959, 1584, 2346, 2371
PfoI	TCCNGGA	1 cut(s)	775
PkrI	GCNGC	7 cut(s)	305, 334, 475, 570, 1213, 1318, 1321
PleI	GAGTC	4 cut(s)	1425, 1678, 1706, 1728
PmaCI	CACGTG	1 cut(s)	469
PmlI	CACGTG	1 cut(s)	469
PpsI	GAGTC	4 cut(s)	1425, 1678, 1706, 1728
Ppu21I	YACGTR	3 cut(s)	163, 415, 469
Psp124BI	GAGCTC	1 cut(s)	1561
Psp6I	CCWGG	3 cut(s)	714, 775, 1020
PspCI	CACGTG	1 cut(s)	469
PspGI	CCWGG	3 cut(s)	714, 775, 1020
PspN4I	GGNNCC	4 cut(s)	986, 1295, 1818, 2415
PspPI	GGNCC	5 cut(s)	116, 254, 284, 289, 2266
PstI	CTGCAG	1 cut(s)	1516
RsaI	GTAC	8 cut(s)	413, 442, 481, 838, 1054, 1096, 1530, 2396
RsaNI	GTAC	8 cut(s)	412, 441, 480, 837, 1053, 1095, 1529, 2395
RseI	CAYNNNNRTG	1 cut(s)	1500
SacI	GAGCTC	1 cut(s)	1561
SapI	GCTCTTC	1 cut(s)	1729
SaqAI	TTAA	7 cut(s)	552, 809, 891, 917, 1338, 1353, 2388
SatI	GCNGC	7 cut(s)	304, 333, 474, 569, 1212, 1317, 1320
Sau3AI	GATC	7 cut(s)	207, 1875, 1990, 2043, 2092, 2116, 2449
Sau96I	GGNCC	5 cut(s)	116, 254, 284, 289, 2266
ScaI	AGTACT	1 cut(s)	838
SchI	GAGTC	4 cut(s)	1425, 1678, 1706, 1729
ScrFI	CCNGG	4 cut(s)	354, 716, 777, 1022
SduI	GDGCHC	6 cut(s)	34, 468, 1296, 1379, 1561, 1741
SfaNI	GCATC	4 cut(s)	178, 644, 931, 1977
SfcI	CTRYAG	1 cut(s)	1512
SinI	GGWCC	1 cut(s)	284
SmiMI	CAYNNNNRTG	1 cut(s)	1500
SmlI	CTYRAG	6 cut(s)	12, 265, 596, 1949, 2072, 2261
SmoI	CTYRAG	6 cut(s)	12, 265, 596, 1949, 2072, 2261
SpeI	ACTAGT	1 cut(s)	895
SphI	GCATGC	1 cut(s)	727
SsiI	CCGC	5 cut(s)	292, 332, 344, 473, 639
SspMI	CTAG	9 cut(s)	56, 80, 197, 317, 896, 1241, 1323, 1680, 1898
SstI	GAGCTC	1 cut(s)	1561
StyD4I	CCNGG	4 cut(s)	352, 714, 775, 1020
StyI	CCWWGG	4 cut(s)	390, 669, 1448, 2417
TaaI	ACNGT	7 cut(s)	29, 169, 952, 1369, 1381, 1847, 2068
TaiI	ACGT	4 cut(s)	165, 417, 471, 2388
TaqI	TCGA	6 cut(s)	544, 1616, 1626, 1874, 1995, 2378
TatI	WGTACW	3 cut(s)	836, 1052, 1528
TauI	GCSGC	2 cut(s)	335, 476
TfiI	GAWTC	6 cut(s)	216, 802, 959, 1584, 2346, 2371
Tru1I	TTAA	7 cut(s)	552, 809, 891, 917, 1338, 1353, 2388
Tru9I	TTAA	7 cut(s)	552, 809, 891, 917, 1338, 1353, 2388
TscAI	CASTG	5 cut(s)	1305, 1384, 1722, 1852, 1912
TseFI	GTSAC	2 cut(s)	163, 200
TseI	GCWGC	5 cut(s)	303, 568, 1211, 1316, 1319
Tsp45I	GTSAC	2 cut(s)	163, 200
TspGWI	ACGGA	3 cut(s)	200, 458, 2149
TspRI	CASTG	5 cut(s)	1305, 1384, 1722, 1852, 1912
VneI	GTGCAC	1 cut(s)	464
VpaK11BI	GGWCC	1 cut(s)	284
XapI	RAATTY	6 cut(s)	1072, 1568, 1770, 1936, 2139, 2235
XceI	RCATGY	2 cut(s)	54, 727
XmiI	GTMKAC	1 cut(s)	886
XmnI	GAANNNNTTC	2 cut(s)	738, 2358
XspI	CTAG	9 cut(s)	56, 80, 197, 317, 896, 1241, 1323, 1680, 1898
ZrmI	AGTACT	1 cut(s)	838
Zsp2I	ATGCAT	1 cut(s)	1977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.