Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005685.1

Orthogroup ID

OG0006479

Physical Location & Seq

Genomic Coordinates Forward (+)

90553 .. 94470

Gene Structure 3918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005685.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

atggcaacctctcaagaccaaacaaaccgtacccgagccttgtggttcacatgcctagcctcggccttccgaaccgcccttgcttgcaccatagtagccatcaccaccctctacgcccctccctctctccgacaccaagcagccttgccggcattctcctacgtgactgtaatcctcattgctcctgatgcaactctaggtgacacattccgtggattctggctcgccctctacgccactattcagagcgtcgggcctgctatcttgagcctctggctcattggaccggccagcctttcgagcagcacaacggctctggccgttggtctggcagcatttgtggtggttctgcccggggaggccactcatttggtgtccaagcgcatagccttgggacagatcgtgcttgtgtacgtgattgctttcataaagggtgggagaacggacgccatcatgcaccctgtgcacgtggcagcgagtacggccgttggggtcttggcttgtgttctggctctgttagttccattcccacgcttggcttgtcgagaggttaaacagaactcaaagctgcttgtggagaatgcttcggagaggctcaagctctttgtgaaggctttttgtgcagaagataacgcatccgcacttgcttcaatttctcaaacaaagtccttggcttccacagcaaccaagctttaccaaaccatcaaacgccaccaggaaagcatgcaatgggagagacttccactacaatttttgagacacagcaatgtcaatccagttgatagattgcaaggtttggagattcccttaaaaggaatggaaatggcattgagtagtactccttcattcccagttggggtagtggatggagagctcaaaagtggtctacttaaactagtagagcaactgagcttaaatagaagcatttcttgtgaagatgcaataactgttcctgattcaaaaccagaaattgatattaggggcctccaaacacttcaaaccatcccacaaacccacctggatttacccccatttttctttttgttttgtacaagtctccttcacggaaatttatcagccacaagttctggtactactacacaggagaaattggtaattcacaaaaaacaagaagcagttccttcatgtaaacaaagtgtgatatggagtaacttctccatgaaggtaagtagcaaaagggttatggcagctttcaagtgctcactttcattgggtctagctgtgttctttggcttgatattcagcaaagaaaatggctattggtcaggcctcccagttgctatcagtttcgctgctgctagagaagcaacatttaaagttgcaaatgttaaagcacaagggactgttttgggcactgtatatggagtatttggttgttttctgttccaaagggtcttacccattagactcttatctctaattccttggttcattttcaccagttttcttcagagaagcaaaatgtatggccaagctggtggtatttctgcagtaattggagctgtactaattttgggcagaacaaactttggagctccaagtgaattcgccatagcaagaatcacagaaaccttcatagggttgtcgtcatcgattatagtcgagctattgttgcaacccacaagagcttccactcttgcaaaagttcaactatctaggactcttggggccttgcatgaatgtattgactcagtgagtcttcaatctggaagagaacaattggaagataaccagaagtgtctgaaaattcatgttgaagaattggggaagctcattgcagaagccaatgtggagcctaatttctggttctttccttttcacagtgcttgttatggaaaactcatcagttcgatctccaaaatgatggaactcctggttttcagtggtcatgcaattgaagttattgaacagaattctcaaatacttgagggttcttggaaaggcatcatgcatacaatggaatgtgatctcgaacttttcaagaagatggtgggctctttgataagttgctttaaggagatcaccctgataaagtcggtaactgttcttgagaaggaagggcttgatgatcaagaaagtgccaaatcttgtgatctggagttgggaaaacggaaaattctaaatgcttttagggtttgtggtttagaggatgaagagatggataagattgtgagttcttatctcctacactcgaaggaagttgttgataaaattcgttgtcagcaaagtgaggagctcaagggccaaatagttttatgtttgagtgctttagggttctgcataagtagtttgatgagagcaacaagggagatagaagagggaatcaaagaactggttcaatgggagaatccttcgagccacgttaatttgtacgaaatctctgtccccgccgaacctcgtcatctccttagtcctcctcactactggcgtttgggttcaacgatgacgtggtcaacagagctcatcaccggtgaagaccacgatgaaggtcctgaagtcgccgttagaggtaaagctttgagtttgaagatttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FUSC_2

Protein Analysis

851

Amino Acids

93.23

Weight (kDa)

7.98

Isoelectric Point (pI)

44.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28780
fragaria_vesca	FvH4_3g35590 FvH4_3g35590
malus_domestica	MD03G1096700.v1.1 MD11G1142900.v1.1
prunus_persica	Prupe.6G081000_v2.0.a1
pyrus_communis	pycom03g07990
rosa_chinensis	RchiOBHm_Chr5g0063771
rosa_laevigata	RLG00000035612 RLG00000035669 RLG00000035670
rosa_multiflora	Rmu_sc0005685.1_g000022 Rmu_sc0005685.1_g000032 Rmu_ssc0000309.1_g000027
rosa_roxburghii	Rroxscaffold_1G00017070
rosa_rugosa	Rorug05G0359500 Rorug05G0359800
rosa_samantha	Rh5AG418300 Rh5BG433400 Rh5BG433900 Rh5CG456600 Rh5CG457100 Rh5DG447000 Rh5DG447200
rosa_wichuraiana	Rw5G039280 Rw5G039290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	886
AciI	CCGC	3 cut(s)	75, 639, 2409
AcoI	YGGCCR	4 cut(s)	288, 318, 483, 1489
AcsI	RAATTY	6 cut(s)	1069, 1565, 1767, 1933, 2136, 2232
AcuI	CTGAAG	2 cut(s)	1454, 2535
AcvI	CACGTG	1 cut(s)	469
AcyI	GRCGYC	1 cut(s)	447
AdeI	CACNNNGTG	1 cut(s)	463
AfaI	GTAC	8 cut(s)	31, 413, 481, 838, 1051, 1093, 1527, 2393
AfiI	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1599
AgeI	ACCGGT	1 cut(s)	2489
AhlI	ACTAGT	1 cut(s)	895
AjiI	CACGTC	1 cut(s)	2469
AjnI	CCWGG	3 cut(s)	714, 1017, 1893
Alw21I	GWGCWC	6 cut(s)	468, 876, 1223, 1558, 2259, 2484
Alw26I	GTCTC	3 cut(s)	730, 751, 1061
Alw44I	GTGCAC	1 cut(s)	464
Ama87I	CYCGRG	2 cut(s)	33, 353
ApaLI	GTGCAC	1 cut(s)	464
ApeKI	GCWGC	8 cut(s)	140, 303, 332, 473, 568, 1208, 1313, 1316
ApoI	RAATTY	6 cut(s)	1069, 1565, 1767, 1933, 2136, 2232
ArsI	GACNNNNNNTTYG	2 cut(s)	2388, 2420
AsiGI	ACCGGT	1 cut(s)	2489
Asp700I	GAANNNNTTC	3 cut(s)	925, 1137, 2355
AspLEI	GCGC	1 cut(s)	384
AspS9I	GGNCC	6 cut(s)	254, 284, 982, 1689, 2263, 2510
AsuC2I	CCSGG	2 cut(s)	354, 355
AsuHPI	GGTGA	6 cut(s)	94, 212, 1450, 2035, 2479, 2504
AvaI	CYCGRG	2 cut(s)	33, 353
AvaII	GGWCC	2 cut(s)	284, 2510
BaeGI	GKGCMC	2 cut(s)	468, 1376
BalI	TGGCCA	1 cut(s)	1491
BanII	GRGCYC	5 cut(s)	876, 1558, 2018, 2259, 2484
BarI	GAAGNNNNNNTAC	2 cut(s)	826, 858
BbrPI	CACGTG	1 cut(s)	469
BbsI	GAAGAC	2 cut(s)	1712, 2502
Bbv12I	GWGCWC	6 cut(s)	468, 876, 1223, 1558, 2259, 2484
BbvI	GCAGC	8 cut(s)	152, 315, 344, 485, 555, 1220, 1300, 1303
BccI	CCATC	8 cut(s)	107, 458, 710, 860, 1010, 1879, 2002, 2173
BceAI	ACGGC	5 cut(s)	305, 327, 470, 498, 2507
BciT130I	CCWGG	3 cut(s)	716, 1019, 1895
BclI	TGATCA	1 cut(s)	2089
BcnI	CCSGG	2 cut(s)	354, 355
BcoDI	GTCTC	3 cut(s)	730, 751, 1061
BcuI	ACTAGT	1 cut(s)	895
BfaI	CTAG	6 cut(s)	56, 197, 896, 1238, 1320, 1677
BfmI	CTRYAG	1 cut(s)	1509
BglI	GCCNNNNNGGC	1 cut(s)	149
BisI	GCNGC	8 cut(s)	141, 304, 333, 474, 569, 1209, 1314, 1317
BlsI	GCNGC	8 cut(s)	142, 305, 334, 475, 570, 1210, 1315, 1318
BmcAI	AGTACT	1 cut(s)	838
Bme1390I	CCNGG	5 cut(s)	354, 355, 716, 1019, 1895
Bme18I	GGWCC	2 cut(s)	284, 2510
BmeT110I	CYCGRG	2 cut(s)	33, 353
BmgBI	CACGTC	1 cut(s)	2469
BmgT120I	GGNCC	6 cut(s)	254, 284, 982, 1689, 2263, 2510
BmiI	GGNNCC	3 cut(s)	983, 1690, 1815
BmrFI	CCNGG	5 cut(s)	354, 355, 716, 1019, 1895
BmrI	ACTGGG	2 cut(s)	845, 1289
BmsI	GCATC	4 cut(s)	178, 644, 928, 1974
BmuI	ACTGGG	2 cut(s)	845, 1289
BpiI	GAAGAC	2 cut(s)	1712, 2502
BplI	GAGNNNNNCTC	2 cut(s)	823, 855
BpmI	CTGGAG	1 cut(s)	2138
BpuEI	CTTGAG	5 cut(s)	286, 581, 1967, 2090, 2243
BpuMI	CCSGG	2 cut(s)	354, 355
Bsa29I	ATCGAT	1 cut(s)	1613
BsaAI	YACGTR	3 cut(s)	163, 415, 469
BsaHI	GRCGYC	1 cut(s)	447
BsaJI	CCNNGG	7 cut(s)	60, 211, 353, 354, 390, 669, 1445
BsaWI	WCCGGW	1 cut(s)	2489
Bsc4I	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1599
Bse118I	RCCGGY	3 cut(s)	148, 286, 2489
Bse1I	ACTGG	6 cut(s)	776, 851, 1295, 1461, 2358, 2450
Bse3DI	GCAATG	4 cut(s)	177, 734, 772, 1794
BseBI	CCWGG	3 cut(s)	716, 1019, 1895
BseCI	ATCGAT	1 cut(s)	1613
BseDI	CCNNGG	7 cut(s)	60, 211, 353, 354, 390, 669, 1445
BseGI	GGATG	4 cut(s)	635, 871, 1002, 2176
BseLI	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1599
BseMI	GCAATG	4 cut(s)	177, 734, 772, 1794
BseMII	CTCAG	2 cut(s)	899, 1725
BseNI	ACTGG	6 cut(s)	776, 851, 1295, 1461, 2358, 2450
BseRI	GAGGAG	2 cut(s)	2267, 2427
BseSI	GKGCMC	2 cut(s)	468, 1376
BseX3I	CGGCCG	1 cut(s)	483
BseXI	GCAGC	8 cut(s)	152, 315, 344, 485, 555, 1220, 1300, 1303
BsgI	GTGCAG	1 cut(s)	642
Bsh1285I	CGRYCG	1 cut(s)	486
BshTI	ACCGGT	1 cut(s)	2489
BshVI	ATCGAT	1 cut(s)	1613
BsiEI	CGRYCG	1 cut(s)	486
BsiHKAI	GWGCWC	6 cut(s)	468, 876, 1223, 1558, 2259, 2484
BsiHKCI	CYCGRG	2 cut(s)	33, 353
BsiSI	CCGG	4 cut(s)	149, 287, 354, 2490
BslFI	GGGAC	3 cut(s)	408, 1375, 2390
BslI	CCNNNNNNNGG	5 cut(s)	61, 535, 812, 856, 1599
BsmAI	GTCTC	3 cut(s)	730, 751, 1061
BsmFI	GGGAC	3 cut(s)	408, 1375, 2390
BsmI	GAATGC	2 cut(s)	152, 586
BsoBI	CYCGRG	2 cut(s)	33, 353
Bsp1286I	GDGCHC	8 cut(s)	468, 876, 1223, 1376, 1558, 2018, 2259, 2484
Bsp1407I	TGTACA	1 cut(s)	1049
Bsp143I	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
BspACI	CCGC	3 cut(s)	75, 639, 2409
BspCNI	CTCAG	2 cut(s)	900, 1724
BspDI	ATCGAT	1 cut(s)	1613
BspLI	GGNNCC	3 cut(s)	983, 1690, 1815
BspMAI	CTGCAG	1 cut(s)	1513
BsrDI	GCAATG	4 cut(s)	177, 734, 772, 1794
BsrFI	RCCGGY	3 cut(s)	148, 286, 2489
BsrGI	TGTACA	1 cut(s)	1049
BsrI	ACTGG	6 cut(s)	776, 851, 1295, 1461, 2358, 2450
BssAI	RCCGGY	3 cut(s)	148, 286, 2489
BssECI	CCNNGG	7 cut(s)	60, 211, 353, 354, 390, 669, 1445
BssMI	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
BssNI	GRCGYC	1 cut(s)	447
BssT1I	CCWWGG	3 cut(s)	390, 669, 1445
Bst2UI	CCWGG	3 cut(s)	716, 1019, 1895
Bst4CI	ACNGT	7 cut(s)	29, 169, 949, 1366, 1378, 1844, 2065
Bst6I	CTCTTC	3 cut(s)	1726, 2169, 2331
BstACI	GRCGYC	1 cut(s)	447
BstAPI	GCANNNNNTGC	1 cut(s)	463
BstAUI	TGTACA	1 cut(s)	1049
BstBAI	YACGTR	3 cut(s)	163, 415, 469
BstC8I	GCNNGC	6 cut(s)	85, 150, 225, 258, 292, 725
BstDEI	CTNAG	3 cut(s)	908, 1711, 2429
BstDSI	CCRYGG	1 cut(s)	211
BstF5I	GGATG	4 cut(s)	635, 871, 1002, 2176
BstHHI	GCGC	1 cut(s)	384
BstKTI	GATC	6 cut(s)	402, 1875, 1990, 2043, 2092, 2116
BstMAI	GTCTC	3 cut(s)	730, 751, 1061
BstMBI	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
BstMCI	CGRYCG	1 cut(s)	486
BstNI	CCWGG	3 cut(s)	716, 1019, 1895
BstNSI	RCATGY	2 cut(s)	54, 727
BstSCI	CCNGG	5 cut(s)	352, 353, 714, 1017, 1893
BstSFI	CTRYAG	1 cut(s)	1509
BstSLI	GKGCMC	2 cut(s)	468, 1376
BstV1I	GCAGC	8 cut(s)	152, 315, 344, 485, 555, 1220, 1300, 1303
BstV2I	GAAGAC	2 cut(s)	1712, 2502
BstXI	CCANNNNNNTGG	3 cut(s)	370, 1499, 1885
BstZI	CGGCCG	1 cut(s)	483
Bsu15I	ATCGAT	1 cut(s)	1613
BsuTUI	ATCGAT	1 cut(s)	1613
BtgI	CCRYGG	1 cut(s)	211
BtrI	CACGTC	1 cut(s)	2469
BtsCI	GGATG	4 cut(s)	635, 871, 1002, 2176
BtsIMutI	CAGTG	4 cut(s)	1374, 1719, 1849, 1909
Cac8I	GCNNGC	6 cut(s)	85, 150, 225, 258, 292, 725
CfoI	GCGC	1 cut(s)	384
Cfr10I	RCCGGY	3 cut(s)	148, 286, 2489
Cfr13I	GGNCC	6 cut(s)	254, 284, 982, 1689, 2263, 2510
Cfr9I	CCCGGG	1 cut(s)	353
ClaI	ATCGAT	1 cut(s)	1613
CseI	GACGC	2 cut(s)	238, 455
Csp6I	GTAC	8 cut(s)	30, 412, 480, 837, 1050, 1092, 1526, 2392
CspAI	ACCGGT	1 cut(s)	2489
CviAII	CATG	9 cut(s)	51, 454, 724, 1146, 1180, 1697, 1772, 1910, 1969
CviQI	GTAC	8 cut(s)	30, 412, 480, 837, 1050, 1092, 1526, 2392
DdeI	CTNAG	3 cut(s)	908, 1711, 2429
DpnI	GATC	6 cut(s)	401, 1874, 1989, 2042, 2091, 2115
DpnII	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
DraI	TTTAAA	1 cut(s)	1336
DraIII	CACNNNGTG	1 cut(s)	463
EaeI	YGGCCR	4 cut(s)	288, 318, 483, 1489
EagI	CGGCCG	1 cut(s)	483
Eam1104I	CTCTTC	3 cut(s)	1726, 2169, 2331
EarI	CTCTTC	3 cut(s)	1726, 2169, 2331
Ecl136II	GAGCTC	4 cut(s)	874, 1556, 2257, 2482
EclXI	CGGCCG	1 cut(s)	483
Eco130I	CCWWGG	3 cut(s)	390, 669, 1445
Eco147I	AGGCCT	1 cut(s)	1290
Eco24I	GRGCYC	5 cut(s)	876, 1558, 2018, 2259, 2484
Eco47I	GGWCC	2 cut(s)	284, 2510
Eco52I	CGGCCG	1 cut(s)	483
Eco53kI	GAGCTC	4 cut(s)	874, 1556, 2257, 2482
Eco57I	CTGAAG	2 cut(s)	1454, 2535
Eco72I	CACGTG	1 cut(s)	469
Eco88I	CYCGRG	2 cut(s)	33, 353
EcoICRI	GAGCTC	4 cut(s)	874, 1556, 2257, 2482
EcoO109I	RGGNCCY	3 cut(s)	982, 1689, 2510
EcoRI	GAATTC	2 cut(s)	1565, 1933
EcoRII	CCWGG	3 cut(s)	714, 1017, 1893
EcoT14I	CCWWGG	3 cut(s)	390, 669, 1445
EcoT22I	ATGCAT	1 cut(s)	1974
EcoT38I	GRGCYC	5 cut(s)	876, 1558, 2018, 2259, 2484
ErhI	CCWWGG	3 cut(s)	390, 669, 1445
FaeI	CATG	9 cut(s)	54, 457, 727, 1149, 1183, 1700, 1775, 1913, 1972
FalI	AAGNNNNNCTT	2 cut(s)	913, 945
FaqI	GGGAC	3 cut(s)	408, 1375, 2390
FatI	CATG	9 cut(s)	50, 453, 723, 1145, 1179, 1696, 1771, 1909, 1968
FauI	CCCGC	1 cut(s)	2416
FbaI	TGATCA	1 cut(s)	2089
FblI	GTMKAC	1 cut(s)	886
Fnu4HI	GCNGC	8 cut(s)	141, 304, 333, 474, 569, 1209, 1314, 1317
FokI	GGATG	4 cut(s)	622, 878, 989, 2183
FriOI	GRGCYC	5 cut(s)	876, 1558, 2018, 2259, 2484
Fsp4HI	GCNGC	8 cut(s)	141, 304, 333, 474, 569, 1209, 1314, 1317
FspBI	CTAG	6 cut(s)	56, 197, 896, 1238, 1320, 1677
GlaI	GCGC	1 cut(s)	383
GluI	GCNGC	8 cut(s)	141, 304, 333, 474, 569, 1209, 1314, 1317
GsuI	CTGGAG	1 cut(s)	2138
HapII	CCGG	4 cut(s)	149, 287, 354, 2490
HgaI	GACGC	2 cut(s)	238, 455
HhaI	GCGC	1 cut(s)	384
Hin1I	GRCGYC	1 cut(s)	447
Hin1II	CATG	9 cut(s)	54, 457, 727, 1149, 1183, 1700, 1775, 1913, 1972
Hin6I	GCGC	1 cut(s)	382
HinP1I	GCGC	1 cut(s)	382
HincII	GTYRAC	1 cut(s)	2475
HindII	GTYRAC	1 cut(s)	2475
HindIII	AAGCTT	2 cut(s)	689, 2535
HpaII	CCGG	4 cut(s)	149, 287, 354, 2490
HphI	GGTGA	6 cut(s)	94, 212, 1450, 2035, 2479, 2504
Hpy166II	GTNNAC	6 cut(s)	48, 412, 466, 887, 1151, 2475
Hpy188I	TCNGA	6 cut(s)	71, 131, 246, 589, 1473, 1764
Hpy8I	GTNNAC	6 cut(s)	48, 412, 466, 887, 1151, 2475
Hpy99I	CGWCG	1 cut(s)	254
HpyCH4III	ACNGT	7 cut(s)	29, 169, 949, 1366, 1378, 1844, 2065
HpyCH4IV	ACGT	5 cut(s)	162, 414, 468, 2382, 2468
HpyF3I	CTNAG	3 cut(s)	908, 1711, 2429
HpySE526I	ACGT	5 cut(s)	162, 414, 468, 2382, 2468
Hsp92I	GRCGYC	1 cut(s)	447
Hsp92II	CATG	9 cut(s)	54, 457, 727, 1149, 1183, 1700, 1775, 1913, 1972
HspAI	GCGC	1 cut(s)	382
KroI	GCCGGC	1 cut(s)	148
KroNI	GCCGGC	1 cut(s)	150
Ksp22I	TGATCA	1 cut(s)	2089
Kzo9I	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
LmnI	GCTCC	6 cut(s)	187, 1520, 1553, 1561, 1813, 2254
Lsp1109I	GCAGC	8 cut(s)	152, 315, 344, 485, 555, 1220, 1300, 1303
LweI	GCATC	4 cut(s)	178, 644, 928, 1974
MaeI	CTAG	6 cut(s)	56, 197, 896, 1238, 1320, 1677
MaeII	ACGT	5 cut(s)	162, 414, 468, 2382, 2468
MaeIII	GTNAC	4 cut(s)	163, 200, 1169, 2059
MalI	GATC	6 cut(s)	401, 1874, 1989, 2042, 2091, 2115
MboI	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
MfeI	CAATTG	2 cut(s)	1739, 1914
MhlI	GDGCHC	8 cut(s)	468, 876, 1223, 1376, 1558, 2018, 2259, 2484
MlsI	TGGCCA	1 cut(s)	1491
MluNI	TGGCCA	1 cut(s)	1491
MlyI	GAGTC	4 cut(s)	1422, 1675, 1703, 1726
MmeI	TCCRAC	1 cut(s)	154
Mox20I	TGGCCA	1 cut(s)	1491
Mph1103I	ATGCAT	1 cut(s)	1974
MroNI	GCCGGC	1 cut(s)	148
MroXI	GAANNNNTTC	3 cut(s)	925, 1137, 2355
MscI	TGGCCA	1 cut(s)	1491
MseI	TTAA	8 cut(s)	552, 809, 891, 914, 1335, 1350, 2034, 2385
MslI	CAYNNNNRTG	1 cut(s)	765
Msp20I	TGGCCA	1 cut(s)	1491
MspI	CCGG	4 cut(s)	149, 287, 354, 2490
MspR9I	CCNGG	5 cut(s)	354, 355, 716, 1019, 1895
MunI	CAATTG	2 cut(s)	1739, 1914
Mva1269I	GAATGC	2 cut(s)	152, 586
MvaI	CCWGG	3 cut(s)	716, 1019, 1895
NaeI	GCCGGC	1 cut(s)	150
NciI	CCSGG	2 cut(s)	354, 355
NdeII	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
NgoMIV	GCCGGC	1 cut(s)	148
NlaIII	CATG	9 cut(s)	54, 457, 727, 1149, 1183, 1700, 1775, 1913, 1972
NlaIV	GGNNCC	3 cut(s)	983, 1690, 1815
NmeAIII	GCCGAG	1 cut(s)	41
NmuCI	GTSAC	2 cut(s)	163, 200
NsiI	ATGCAT	1 cut(s)	1974
NspI	RCATGY	2 cut(s)	54, 727
PaeI	GCATGC	1 cut(s)	727
PceI	AGGCCT	1 cut(s)	1290
PctI	GAATGC	2 cut(s)	152, 586
PdiI	GCCGGC	1 cut(s)	150
PdmI	GAANNNNTTC	3 cut(s)	925, 1137, 2355
PfeI	GAWTC	6 cut(s)	216, 802, 956, 1581, 2343, 2368
PflFI	GACNNNGTC	1 cut(s)	2470
PinAI	ACCGGT	1 cut(s)	2489
PkrI	GCNGC	8 cut(s)	142, 305, 334, 475, 570, 1210, 1315, 1318
PleI	GAGTC	4 cut(s)	1422, 1675, 1703, 1725
PmaCI	CACGTG	1 cut(s)	469
PmlI	CACGTG	1 cut(s)	469
PpsI	GAGTC	4 cut(s)	1422, 1675, 1703, 1725
Ppu21I	YACGTR	3 cut(s)	163, 415, 469
PpuMI	RGGWCCY	1 cut(s)	2510
Psp124BI	GAGCTC	4 cut(s)	876, 1558, 2259, 2484
Psp5II	RGGWCCY	1 cut(s)	2510
Psp6I	CCWGG	3 cut(s)	714, 1017, 1893
PspCI	CACGTG	1 cut(s)	469
PspGI	CCWGG	3 cut(s)	714, 1017, 1893
PspN4I	GGNNCC	3 cut(s)	983, 1690, 1815
PspPI	GGNCC	6 cut(s)	254, 284, 982, 1689, 2263, 2510
PspPPI	RGGWCCY	1 cut(s)	2510
PstI	CTGCAG	1 cut(s)	1513
PsyI	GACNNNGTC	1 cut(s)	2470
RsaI	GTAC	8 cut(s)	31, 413, 481, 838, 1051, 1093, 1527, 2393
RsaNI	GTAC	8 cut(s)	30, 412, 480, 837, 1050, 1092, 1526, 2392
RseI	CAYNNNNRTG	1 cut(s)	765
SacI	GAGCTC	4 cut(s)	876, 1558, 2259, 2484
SaqAI	TTAA	8 cut(s)	552, 809, 891, 914, 1335, 1350, 2034, 2385
SatI	GCNGC	8 cut(s)	141, 304, 333, 474, 569, 1209, 1314, 1317
Sau3AI	GATC	6 cut(s)	399, 1872, 1987, 2040, 2089, 2113
Sau96I	GGNCC	6 cut(s)	254, 284, 982, 1689, 2263, 2510
ScaI	AGTACT	1 cut(s)	838
SchI	GAGTC	4 cut(s)	1422, 1675, 1703, 1726
ScrFI	CCNGG	5 cut(s)	354, 355, 716, 1019, 1895
SduI	GDGCHC	8 cut(s)	468, 876, 1223, 1376, 1558, 2018, 2259, 2484
SfaNI	GCATC	4 cut(s)	178, 644, 928, 1974
SfcI	CTRYAG	1 cut(s)	1509
SgrAI	CRCCGGYG	1 cut(s)	2489
SinI	GGWCC	2 cut(s)	284, 2510
SmaI	CCCGGG	1 cut(s)	355
SmiMI	CAYNNNNRTG	1 cut(s)	765
SmlI	CTYRAG	6 cut(s)	12, 265, 596, 1946, 2069, 2258
SmoI	CTYRAG	6 cut(s)	12, 265, 596, 1946, 2069, 2258
SpeI	ACTAGT	1 cut(s)	895
SphI	GCATGC	1 cut(s)	727
SseBI	AGGCCT	1 cut(s)	1290
SsiI	CCGC	3 cut(s)	75, 639, 2409
SspMI	CTAG	6 cut(s)	56, 197, 896, 1238, 1320, 1677
SstI	GAGCTC	4 cut(s)	876, 1558, 2259, 2484
StuI	AGGCCT	1 cut(s)	1290
StyD4I	CCNGG	5 cut(s)	352, 353, 714, 1017, 1893
StyI	CCWWGG	3 cut(s)	390, 669, 1445
TaaI	ACNGT	7 cut(s)	29, 169, 949, 1366, 1378, 1844, 2065
TaiI	ACGT	5 cut(s)	165, 417, 471, 2385, 2471
TaqI	TCGA	8 cut(s)	299, 544, 1613, 1623, 1871, 1992, 2213, 2375
TatI	WGTACW	3 cut(s)	836, 1049, 1525
TfiI	GAWTC	6 cut(s)	216, 802, 956, 1581, 2343, 2368
Tru1I	TTAA	8 cut(s)	552, 809, 891, 914, 1335, 1350, 2034, 2385
Tru9I	TTAA	8 cut(s)	552, 809, 891, 914, 1335, 1350, 2034, 2385
TscAI	CASTG	4 cut(s)	1381, 1719, 1849, 1909
TseFI	GTSAC	2 cut(s)	163, 200
TseI	GCWGC	8 cut(s)	140, 303, 332, 473, 568, 1208, 1313, 1316
Tsp45I	GTSAC	2 cut(s)	163, 200
TspGWI	ACGGA	4 cut(s)	200, 458, 1080, 2146
TspMI	CCCGGG	1 cut(s)	353
TspRI	CASTG	4 cut(s)	1381, 1719, 1849, 1909
Tth111I	GACNNNGTC	1 cut(s)	2470
VneI	GTGCAC	1 cut(s)	464
VpaK11BI	GGWCC	2 cut(s)	284, 2510
XapI	RAATTY	6 cut(s)	1069, 1565, 1767, 1933, 2136, 2232
XceI	RCATGY	2 cut(s)	54, 727
XmaI	CCCGGG	1 cut(s)	353
XmiI	GTMKAC	1 cut(s)	886
XmnI	GAANNNNTTC	3 cut(s)	925, 1137, 2355
XspI	CTAG	6 cut(s)	56, 197, 896, 1238, 1320, 1677
ZrmI	AGTACT	1 cut(s)	838
Zsp2I	ATGCAT	1 cut(s)	1974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.