Mitochondrial ubiquitin ligase activator of NFKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g24090 |
| prunus_persica | Prupe.8G247000_v2.0.a1 |
| pyrus_communis | pycom03g21550 pycom11g25820 |
| rosa_chinensis | RchiOBHm_Chr6g0291871 |
| rosa_laevigata | RLG00000012081 |
| rosa_multiflora | Rmu_sc0002484.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00175670 |
| rosa_rugosa | Rorug06G0221700 |
| rosa_samantha | Rh6AG335000 Rh6BG342400 Rh6CG348400 Rh6DG335200 |
| rosa_wichuraiana | Rw6G029150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 11 |
| AcuI | CTGAAG | 1 cut(s) | 154 |
| AcyI | GRCGYC | 1 cut(s) | 479 |
| AfaI | GTAC | 1 cut(s) | 24 |
| AgeI | ACCGGT | 1 cut(s) | 307 |
| AgsI | TTSAA | 2 cut(s) | 147, 404 |
| AjiI | CACGTC | 1 cut(s) | 333 |
| AluBI | AGCT | 2 cut(s) | 242, 296 |
| AluI | AGCT | 2 cut(s) | 242, 296 |
| ApeKI | GCWGC | 3 cut(s) | 134, 242, 261 |
| ApoI | RAATTY | 1 cut(s) | 11 |
| AsiGI | ACCGGT | 1 cut(s) | 307 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 127, 167, 467 |
| AspLEI | GCGC | 1 cut(s) | 176 |
| AsuII | TTCGAA | 2 cut(s) | 440, 485 |
| BbvI | GCAGC | 3 cut(s) | 121, 229, 273 |
| BccI | CCATC | 2 cut(s) | 103, 185 |
| BceAI | ACGGC | 1 cut(s) | 200 |
| BclI | TGATCA | 1 cut(s) | 87 |
| BfaI | CTAG | 1 cut(s) | 255 |
| BfoI | RGCGCY | 1 cut(s) | 177 |
| BisI | GCNGC | 3 cut(s) | 135, 243, 262 |
| BlsI | GCNGC | 3 cut(s) | 136, 244, 263 |
| BmcAI | AGTACT | 1 cut(s) | 24 |
| BmgBI | CACGTC | 1 cut(s) | 333 |
| BmsI | GCATC | 2 cut(s) | 146, 256 |
| Bpu14I | TTCGAA | 2 cut(s) | 440, 485 |
| BpuEI | CTTGAG | 2 cut(s) | 336, 372 |
| BsaBI | GATNNNNATC | 1 cut(s) | 326 |
| BsaHI | GRCGYC | 1 cut(s) | 479 |
| BsaWI | WCCGGW | 1 cut(s) | 307 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 172, 202 |
| Bse118I | RCCGGY | 1 cut(s) | 307 |
| Bse8I | GATNNNNATC | 1 cut(s) | 326 |
| BseJI | GATNNNNATC | 1 cut(s) | 326 |
| BseMII | CTCAG | 1 cut(s) | 85 |
| BseXI | GCAGC | 3 cut(s) | 121, 229, 273 |
| BshTI | ACCGGT | 1 cut(s) | 307 |
| BsiSI | CCGG | 1 cut(s) | 308 |
| Bsp119I | TTCGAA | 2 cut(s) | 440, 485 |
| Bsp143I | GATC | 3 cut(s) | 3, 87, 406 |
| BspCNI | CTCAG | 1 cut(s) | 84 |
| BspT104I | TTCGAA | 2 cut(s) | 440, 485 |
| BsrFI | RCCGGY | 1 cut(s) | 307 |
| BssAI | RCCGGY | 1 cut(s) | 307 |
| BssMI | GATC | 3 cut(s) | 3, 87, 406 |
| BssNI | GRCGYC | 1 cut(s) | 479 |
| Bst4CI | ACNGT | 1 cut(s) | 184 |
| BstACI | GRCGYC | 1 cut(s) | 479 |
| BstBI | TTCGAA | 2 cut(s) | 440, 485 |
| BstC8I | GCNNGC | 1 cut(s) | 368 |
| BstDEI | CTNAG | 1 cut(s) | 71 |
| BstH2I | RGCGCY | 1 cut(s) | 177 |
| BstHHI | GCGC | 1 cut(s) | 176 |
| BstKTI | GATC | 3 cut(s) | 6, 90, 409 |
| BstMBI | GATC | 3 cut(s) | 3, 87, 406 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 200, 251, 302 |
| BstV1I | GCAGC | 3 cut(s) | 121, 229, 273 |
| BtgZI | GCGATG | 1 cut(s) | 279 |
| BtrI | CACGTC | 1 cut(s) | 333 |
| Cac8I | GCNNGC | 1 cut(s) | 368 |
| CfoI | GCGC | 1 cut(s) | 176 |
| Cfr10I | RCCGGY | 1 cut(s) | 307 |
| CseI | GACGC | 1 cut(s) | 487 |
| Csp6I | GTAC | 1 cut(s) | 23 |
| CspAI | ACCGGT | 1 cut(s) | 307 |
| CviAII | CATG | 2 cut(s) | 251, 371 |
| CviJI | RGCY | 3 cut(s) | 215, 242, 296 |
| CviKI_1 | RGCY | 3 cut(s) | 215, 242, 296 |
| CviQI | GTAC | 1 cut(s) | 23 |
| DdeI | CTNAG | 1 cut(s) | 71 |
| DpnI | GATC | 3 cut(s) | 5, 89, 408 |
| DpnII | GATC | 3 cut(s) | 3, 87, 406 |
| Eco57I | CTGAAG | 1 cut(s) | 154 |
| FaeI | CATG | 2 cut(s) | 254, 374 |
| FaiI | YATR | 7 cut(s) | 94, 100, 196, 252, 372, 447, 473 |
| FatI | CATG | 2 cut(s) | 250, 370 |
| FbaI | TGATCA | 1 cut(s) | 87 |
| Fnu4HI | GCNGC | 3 cut(s) | 135, 243, 262 |
| Fsp4HI | GCNGC | 3 cut(s) | 135, 243, 262 |
| FspBI | CTAG | 1 cut(s) | 255 |
| GlaI | GCGC | 1 cut(s) | 175 |
| GluI | GCNGC | 3 cut(s) | 135, 243, 262 |
| HaeII | RGCGCY | 1 cut(s) | 177 |
| HapII | CCGG | 1 cut(s) | 308 |
| HgaI | GACGC | 1 cut(s) | 487 |
| HhaI | GCGC | 1 cut(s) | 176 |
| Hin1I | GRCGYC | 1 cut(s) | 479 |
| Hin1II | CATG | 2 cut(s) | 254, 374 |
| Hin6I | GCGC | 1 cut(s) | 174 |
| HinP1I | GCGC | 1 cut(s) | 174 |
| HinfI | GANTC | 3 cut(s) | 143, 316, 322 |
| HpaII | CCGG | 1 cut(s) | 308 |
| Hpy188I | TCNGA | 3 cut(s) | 142, 321, 337 |
| Hpy188III | TCNNGA | 1 cut(s) | 452 |
| Hpy99I | CGWCG | 2 cut(s) | 51, 481 |
| HpyAV | CCTTC | 1 cut(s) | 492 |
| HpyCH4III | ACNGT | 1 cut(s) | 184 |
| HpyCH4IV | ACGT | 1 cut(s) | 332 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 194 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 200, 251, 302 |
| HpyF3I | CTNAG | 1 cut(s) | 71 |
| HpySE526I | ACGT | 1 cut(s) | 332 |
| Hsp92I | GRCGYC | 1 cut(s) | 479 |
| Hsp92II | CATG | 2 cut(s) | 254, 374 |
| HspAI | GCGC | 1 cut(s) | 174 |
| Ksp22I | TGATCA | 1 cut(s) | 87 |
| Kzo9I | GATC | 3 cut(s) | 3, 87, 406 |
| LmnI | GCTCC | 2 cut(s) | 51, 274 |
| LpnPI | CCDG | 2 cut(s) | 204, 321 |
| Lsp1109I | GCAGC | 3 cut(s) | 121, 229, 273 |
| LweI | GCATC | 2 cut(s) | 146, 256 |
| MaeI | CTAG | 1 cut(s) | 255 |
| MaeII | ACGT | 1 cut(s) | 332 |
| MalI | GATC | 3 cut(s) | 5, 89, 408 |
| MboI | GATC | 3 cut(s) | 3, 87, 406 |
| MboII | GAAGA | 4 cut(s) | 160, 416, 472, 475 |
| MluCI | AATT | 3 cut(s) | 11, 127, 204 |
| MnlI | CCTC | 3 cut(s) | 256, 355, 407 |
| MroXI | GAANNNNTTC | 3 cut(s) | 127, 167, 467 |
| MseI | TTAA | 2 cut(s) | 357, 426 |
| MspI | CCGG | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 200, 251, 302 |
| NdeII | GATC | 3 cut(s) | 3, 87, 406 |
| NlaIII | CATG | 2 cut(s) | 254, 374 |
| NmeAIII | GCCGAG | 1 cut(s) | 236 |
| NspV | TTCGAA | 2 cut(s) | 440, 485 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 482 |
| PdmI | GAANNNNTTC | 3 cut(s) | 127, 167, 467 |
| PfeI | GAWTC | 3 cut(s) | 143, 316, 322 |
| PinAI | ACCGGT | 1 cut(s) | 307 |
| PkrI | GCNGC | 3 cut(s) | 136, 244, 263 |
| RsaI | GTAC | 1 cut(s) | 24 |
| RsaNI | GTAC | 1 cut(s) | 23 |
| SaqAI | TTAA | 2 cut(s) | 357, 426 |
| SatI | GCNGC | 3 cut(s) | 135, 243, 262 |
| Sau3AI | GATC | 3 cut(s) | 3, 87, 406 |
| ScaI | AGTACT | 1 cut(s) | 24 |
| SetI | ASST | 4 cut(s) | 238, 244, 298, 335 |
| SfaNI | GCATC | 2 cut(s) | 146, 256 |
| SfuI | TTCGAA | 2 cut(s) | 440, 485 |
| SmlI | CTYRAG | 2 cut(s) | 351, 387 |
| SmoI | CTYRAG | 2 cut(s) | 351, 387 |
| Sse9I | AATT | 3 cut(s) | 11, 127, 204 |
| SspI | AATATT | 2 cut(s) | 400, 490 |
| SspMI | CTAG | 1 cut(s) | 255 |
| TaaI | ACNGT | 1 cut(s) | 184 |
| TaiI | ACGT | 1 cut(s) | 335 |
| TaqI | TCGA | 4 cut(s) | 199, 440, 476, 485 |
| TasI | AATT | 3 cut(s) | 11, 127, 204 |
| TatI | WGTACW | 1 cut(s) | 22 |
| TfiI | GAWTC | 3 cut(s) | 143, 316, 322 |
| Tru1I | TTAA | 2 cut(s) | 357, 426 |
| Tru9I | TTAA | 2 cut(s) | 357, 426 |
| TseI | GCWGC | 3 cut(s) | 134, 242, 261 |
| TspDTI | ATGAA | 3 cut(s) | 87, 387, 460 |
| TspGWI | ACGGA | 1 cut(s) | 64 |
| XapI | RAATTY | 1 cut(s) | 11 |
| XmnI | GAANNNNTTC | 3 cut(s) | 127, 167, 467 |
| XspI | CTAG | 1 cut(s) | 255 |
| ZrmI | AGTACT | 1 cut(s) | 24 |