Component of the post-replicative DNA mismatch repair system (MMR)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02070 AT4G02070 |
| fragaria_vesca | FvH4_5g39410 FvH4_5g39410 FvH4_5g39410 FvH4_5g39410 |
| malus_domestica | MD01G1013000.v1.1 MD03G1296000.v1.1 MD11G1315400.v1.1 |
| prunus_persica | Prupe.8G271300_v2.0.a1 Prupe.8G271300_v2.0.a1 Prupe.8G271300_v2.0.a1 Prupe.8G271300_v2.0.a1 |
| pyrus_communis | pycom03g23420 pycom11g27540 |
| rosa_laevigata | RLG00000000552 |
| rosa_multiflora | Rmu_sc0022843.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00218800 |
| rosa_samantha | Rh7CG517400 Rh7DG485900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2222 |
| AarI | CACCTGC | 1 cut(s) | 1898 |
| Acc36I | ACCTGC | 2 cut(s) | 1657, 1898 |
| AccB1I | GGYRCC | 1 cut(s) | 736 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2024 |
| AccBSI | CCGCTC | 3 cut(s) | 795, 1519, 2320 |
| AccI | GTMKAC | 1 cut(s) | 3242 |
| AccII | CGCG | 1 cut(s) | 13 |
| AccIII | TCCGGA | 3 cut(s) | 1252, 2308, 2803 |
| AciI | CCGC | 7 cut(s) | 763, 795, 1519, 2320, 2358, 3503, 3765 |
| AclWI | GGATC | 3 cut(s) | 374, 1037, 1353 |
| AcoI | YGGCCR | 5 cut(s) | 28, 343, 380, 1093, 3193 |
| AcsI | RAATTY | 7 cut(s) | 1160, 1486, 1495, 1736, 2003, 2282, 3779 |
| AcuI | CTGAAG | 6 cut(s) | 486, 915, 2106, 2396, 3411, 3468 |
| AcyI | GRCGYC | 1 cut(s) | 8 |
| AfaI | GTAC | 8 cut(s) | 401, 455, 1058, 2642, 2846, 3093, 3157, 3385 |
| AflIII | ACRYGT | 1 cut(s) | 2459 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2978 |
| AhlI | ACTAGT | 1 cut(s) | 3866 |
| AjiI | CACGTC | 1 cut(s) | 3470 |
| AjnI | CCWGG | 5 cut(s) | 1289, 1974, 2232, 3685, 3773 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2819, 2851, 3372, 3404 |
| AleI | CACNNNNGTG | 1 cut(s) | 569 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3282, 3314 |
| Alw21I | GWGCWC | 2 cut(s) | 1930, 2883 |
| Alw26I | GTCTC | 7 cut(s) | 1093, 1616, 1976, 2109, 2682, 2965, 2986 |
| Alw44I | GTGCAC | 1 cut(s) | 1926 |
| AlwI | GGATC | 3 cut(s) | 374, 1037, 1353 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1481, 3410 |
| Ama87I | CYCGRG | 1 cut(s) | 2839 |
| Aor13HI | TCCGGA | 3 cut(s) | 1252, 2308, 2803 |
| ApaLI | GTGCAC | 1 cut(s) | 1926 |
| ApeKI | GCWGC | 3 cut(s) | 1872, 2072, 2396 |
| ApoI | RAATTY | 7 cut(s) | 1160, 1486, 1495, 1736, 2003, 2282, 3779 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 396, 428, 3323, 3355 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 527, 1262, 2755, 3139, 3510, 3553 |
| AspLEI | GCGC | 2 cut(s) | 57, 1002 |
| AspS9I | GGNCC | 8 cut(s) | 21, 508, 548, 2850, 3044, 3118, 3221, 3535 |
| AsuC2I | CCSGG | 4 cut(s) | 264, 512, 1068, 1559 |
| AsuII | TTCGAA | 1 cut(s) | 251 |
| AvaI | CYCGRG | 1 cut(s) | 2839 |
| AvaII | GGWCC | 5 cut(s) | 21, 508, 2850, 3221, 3535 |
| BaeGI | GKGCMC | 2 cut(s) | 741, 1930 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 391, 424, 3147, 3147, 3180, 3180 |
| BalI | TGGCCA | 2 cut(s) | 1095, 3195 |
| BanI | GGYRCC | 1 cut(s) | 736 |
| BanII | GRGCYC | 1 cut(s) | 2883 |
| BauI | CACGAG | 1 cut(s) | 347 |
| BbsI | GAAGAC | 6 cut(s) | 609, 830, 2243, 2329, 2528, 3417 |
| Bbv12I | GWGCWC | 2 cut(s) | 1930, 2883 |
| BbvCI | CCTCAGC | 3 cut(s) | 678, 946, 1625 |
| BbvI | GCAGC | 3 cut(s) | 1859, 2059, 2383 |
| BccI | CCATC | 9 cut(s) | 583, 1147, 1336, 1358, 1856, 1891, 3129, 3482, 3638 |
| BceAI | ACGGC | 4 cut(s) | 43, 358, 367, 871 |
| BciT130I | CCWGG | 5 cut(s) | 1291, 1976, 2234, 3687, 3775 |
| BciVI | GTATCC | 2 cut(s) | 916, 3175 |
| BclI | TGATCA | 1 cut(s) | 1795 |
| BcnI | CCSGG | 4 cut(s) | 264, 512, 1068, 1559 |
| BcoDI | GTCTC | 7 cut(s) | 1093, 1616, 1976, 2109, 2682, 2965, 2986 |
| BcuI | ACTAGT | 1 cut(s) | 3866 |
| BfmI | CTRYAG | 6 cut(s) | 1214, 1371, 2991, 3303, 3579, 3935 |
| BfoI | RGCGCY | 1 cut(s) | 58 |
| BfuAI | ACCTGC | 2 cut(s) | 1657, 1898 |
| BfuI | GTATCC | 2 cut(s) | 916, 3175 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 864 |
| BisI | GCNGC | 3 cut(s) | 1873, 2073, 2397 |
| BlsI | GCNGC | 3 cut(s) | 1874, 2074, 2398 |
| Bme1390I | CCNGG | 9 cut(s) | 264, 512, 1068, 1291, 1559, 1976, 2234, 3687, 3775 |
| Bme18I | GGWCC | 5 cut(s) | 21, 508, 2850, 3221, 3535 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2978 |
| BmeT110I | CYCGRG | 1 cut(s) | 2839 |
| BmgBI | CACGTC | 1 cut(s) | 3470 |
| BmgT120I | GGNCC | 8 cut(s) | 21, 508, 548, 2850, 3044, 3118, 3221, 3535 |
| BmiI | GGNNCC | 6 cut(s) | 509, 510, 738, 879, 2852, 3046 |
| BmrFI | CCNGG | 9 cut(s) | 264, 512, 1068, 1291, 1559, 1976, 2234, 3687, 3775 |
| BmrI | ACTGGG | 3 cut(s) | 1721, 2534, 2726 |
| BmuI | ACTGGG | 3 cut(s) | 1721, 2534, 2726 |
| BpiI | GAAGAC | 6 cut(s) | 609, 830, 2243, 2329, 2528, 3417 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2630, 2662 |
| BpmI | CTGGAG | 1 cut(s) | 3837 |
| Bpu10I | CCTNAGC | 4 cut(s) | 678, 704, 946, 1625 |
| Bpu14I | TTCGAA | 1 cut(s) | 251 |
| BpuEI | CTTGAG | 3 cut(s) | 845, 2108, 3536 |
| BpuMI | CCSGG | 4 cut(s) | 264, 512, 1068, 1559 |
| Bsa29I | ATCGAT | 2 cut(s) | 2729, 3000 |
| BsaAI | YACGTR | 1 cut(s) | 2435 |
| BsaHI | GRCGYC | 1 cut(s) | 8 |
| BsaI | GGTCTC | 1 cut(s) | 2986 |
| BsaJI | CCNNGG | 4 cut(s) | 988, 1024, 3544, 3774 |
| BsaWI | WCCGGW | 5 cut(s) | 773, 874, 1252, 2308, 2803 |
| Bse3DI | GCAATG | 2 cut(s) | 3498, 3717 |
| BseAI | TCCGGA | 3 cut(s) | 1252, 2308, 2803 |
| BseBI | CCWGG | 5 cut(s) | 1291, 1976, 2234, 3687, 3775 |
| BseCI | ATCGAT | 2 cut(s) | 2729, 3000 |
| BseDI | CCNNGG | 4 cut(s) | 988, 1024, 3544, 3774 |
| BseMI | GCAATG | 2 cut(s) | 3498, 3717 |
| BseRI | GAGGAG | 1 cut(s) | 713 |
| BseSI | GKGCMC | 2 cut(s) | 741, 1930 |
| BseXI | GCAGC | 3 cut(s) | 1859, 2059, 2383 |
| BseYI | CCCAGC | 1 cut(s) | 311 |
| BsgI | GTGCAG | 4 cut(s) | 1422, 1615, 2484, 2809 |
| Bsh1236I | CGCG | 1 cut(s) | 13 |
| BshNI | GGYRCC | 1 cut(s) | 736 |
| BshVI | ATCGAT | 2 cut(s) | 2729, 3000 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1930, 2883 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2839 |
| BsiSI | CCGG | 9 cut(s) | 264, 512, 774, 875, 1068, 1253, 1558, 2309, 2804 |
| BslFI | GGGAC | 7 cut(s) | 82, 246, 494, 674, 913, 1709, 2140 |
| BsmAI | GTCTC | 7 cut(s) | 1093, 1616, 1976, 2109, 2682, 2965, 2986 |
| BsmFI | GGGAC | 7 cut(s) | 82, 246, 494, 674, 913, 1709, 2140 |
| BsmI | GAATGC | 1 cut(s) | 2371 |
| Bso31I | GGTCTC | 1 cut(s) | 2986 |
| BsoBI | CYCGRG | 1 cut(s) | 2839 |
| Bsp119I | TTCGAA | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 3 cut(s) | 741, 1930, 2883 |
| Bsp13I | TCCGGA | 3 cut(s) | 1252, 2308, 2803 |
| Bsp143I | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| BspACI | CCGC | 7 cut(s) | 763, 795, 1519, 2320, 2358, 3503, 3765 |
| BspDI | ATCGAT | 2 cut(s) | 2729, 3000 |
| BspEI | TCCGGA | 3 cut(s) | 1252, 2308, 2803 |
| BspFNI | CGCG | 1 cut(s) | 13 |
| BspHI | TCATGA | 3 cut(s) | 2620, 3066, 3871 |
| BspLI | GGNNCC | 6 cut(s) | 509, 510, 738, 879, 2852, 3046 |
| BspMAI | CTGCAG | 3 cut(s) | 1218, 2995, 3307 |
| BspMI | ACCTGC | 2 cut(s) | 1657, 1898 |
| BspPI | GGATC | 3 cut(s) | 374, 1037, 1353 |
| BspT104I | TTCGAA | 1 cut(s) | 251 |
| BspT107I | GGYRCC | 1 cut(s) | 736 |
| BspTNI | GGTCTC | 1 cut(s) | 2986 |
| BsrBI | CCGCTC | 3 cut(s) | 795, 1519, 2320 |
| BsrDI | GCAATG | 2 cut(s) | 3498, 3717 |
| BssECI | CCNNGG | 4 cut(s) | 988, 1024, 3544, 3774 |
| BssMI | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| BssNI | GRCGYC | 1 cut(s) | 8 |
| BssSI | CACGAG | 1 cut(s) | 347 |
| BssT1I | CCWWGG | 2 cut(s) | 988, 1024 |
| Bst2BI | CACGAG | 1 cut(s) | 347 |
| Bst2UI | CCWGG | 5 cut(s) | 1291, 1976, 2234, 3687, 3775 |
| Bst6I | CTCTTC | 4 cut(s) | 356, 690, 2125, 2165 |
| BstACI | GRCGYC | 1 cut(s) | 8 |
| BstBAI | YACGTR | 1 cut(s) | 2435 |
| BstBI | TTCGAA | 1 cut(s) | 251 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 949, 2622 |
| BstFNI | CGCG | 1 cut(s) | 13 |
| BstH2I | RGCGCY | 1 cut(s) | 58 |
| BstHHI | GCGC | 2 cut(s) | 57, 1002 |
| BstKTI | GATC | 7 cut(s) | 369, 501, 1045, 1348, 1588, 1798, 2733 |
| BstMAI | GTCTC | 7 cut(s) | 1093, 1616, 1976, 2109, 2682, 2965, 2986 |
| BstMBI | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 541, 864, 1690, 1872, 1885, 1934, 3201, 3702, 3728 |
| BstNI | CCWGG | 5 cut(s) | 1291, 1976, 2234, 3687, 3775 |
| BstNSI | RCATGY | 3 cut(s) | 2463, 3627, 3696 |
| BstSCI | CCNGG | 9 cut(s) | 262, 510, 1066, 1289, 1557, 1974, 2232, 3685, 3773 |
| BstSFI | CTRYAG | 6 cut(s) | 1214, 1371, 2991, 3303, 3579, 3935 |
| BstSLI | GKGCMC | 2 cut(s) | 741, 1930 |
| BstUI | CGCG | 1 cut(s) | 13 |
| BstV1I | GCAGC | 3 cut(s) | 1859, 2059, 2383 |
| BstV2I | GAAGAC | 6 cut(s) | 609, 830, 2243, 2329, 2528, 3417 |
| BstX2I | RGATCY | 1 cut(s) | 1345 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 571 |
| BstYI | RGATCY | 1 cut(s) | 1345 |
| Bsu15I | ATCGAT | 2 cut(s) | 2729, 3000 |
| BsuI | GTATCC | 2 cut(s) | 916, 3175 |
| BsuTUI | ATCGAT | 2 cut(s) | 2729, 3000 |
| BtgZI | GCGATG | 1 cut(s) | 651 |
| BtrI | CACGTC | 1 cut(s) | 3470 |
| BtsI | GCAGTG | 4 cut(s) | 1410, 1482, 1603, 1846 |
| BveI | ACCTGC | 2 cut(s) | 1657, 1898 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1481, 3410 |
| CciI | TCATGA | 3 cut(s) | 2620, 3066, 3871 |
| CfoI | GCGC | 2 cut(s) | 57, 1002 |
| Cfr13I | GGNCC | 8 cut(s) | 21, 508, 548, 2850, 3044, 3118, 3221, 3535 |
| ClaI | ATCGAT | 2 cut(s) | 2729, 3000 |
| CseI | GACGC | 2 cut(s) | 2, 1466 |
| Csp6I | GTAC | 8 cut(s) | 400, 454, 1057, 2641, 2845, 3092, 3156, 3384 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 817, 852, 1257, 1292 |
| CviQI | GTAC | 8 cut(s) | 400, 454, 1057, 2641, 2845, 3092, 3156, 3384 |
| DpnI | GATC | 7 cut(s) | 368, 500, 1044, 1347, 1587, 1797, 2732 |
| DpnII | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| DraI | TTTAAA | 1 cut(s) | 1962 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2978 |
| EaeI | YGGCCR | 5 cut(s) | 28, 343, 380, 1093, 3193 |
| Eam1104I | CTCTTC | 4 cut(s) | 356, 690, 2125, 2165 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2978 |
| EarI | CTCTTC | 4 cut(s) | 356, 690, 2125, 2165 |
| Ecl136II | GAGCTC | 1 cut(s) | 2881 |
| Eco130I | CCWWGG | 2 cut(s) | 988, 1024 |
| Eco147I | AGGCCT | 2 cut(s) | 1630, 1970 |
| Eco24I | GRGCYC | 1 cut(s) | 2883 |
| Eco31I | GGTCTC | 1 cut(s) | 2986 |
| Eco32I | GATATC | 1 cut(s) | 2860 |
| Eco47I | GGWCC | 5 cut(s) | 21, 508, 2850, 3221, 3535 |
| Eco53kI | GAGCTC | 1 cut(s) | 2881 |
| Eco57I | CTGAAG | 6 cut(s) | 486, 915, 2106, 2396, 3411, 3468 |
| Eco88I | CYCGRG | 1 cut(s) | 2839 |
| EcoICRI | GAGCTC | 1 cut(s) | 2881 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 949, 2622 |
| EcoO109I | RGGNCCY | 3 cut(s) | 508, 548, 3044 |
| EcoRI | GAATTC | 2 cut(s) | 1736, 3779 |
| EcoRII | CCWGG | 5 cut(s) | 1289, 1974, 2232, 3685, 3773 |
| EcoRV | GATATC | 1 cut(s) | 2860 |
| EcoT14I | CCWWGG | 2 cut(s) | 988, 1024 |
| EcoT38I | GRGCYC | 1 cut(s) | 2883 |
| ErhI | CCWWGG | 2 cut(s) | 988, 1024 |
| FaqI | GGGAC | 7 cut(s) | 82, 246, 494, 674, 913, 1709, 2140 |
| FauI | CCCGC | 2 cut(s) | 756, 1512 |
| FauNDI | CATATG | 2 cut(s) | 3618, 3793 |
| FbaI | TGATCA | 1 cut(s) | 1795 |
| FblI | GTMKAC | 1 cut(s) | 3242 |
| Fnu4HI | GCNGC | 3 cut(s) | 1873, 2073, 2397 |
| FriOI | GRGCYC | 1 cut(s) | 2883 |
| Fsp4HI | GCNGC | 3 cut(s) | 1873, 2073, 2397 |
| GlaI | GCGC | 2 cut(s) | 56, 1001 |
| GluI | GCNGC | 3 cut(s) | 1873, 2073, 2397 |
| GsaI | CCCAGC | 1 cut(s) | 315 |
| GsuI | CTGGAG | 1 cut(s) | 3837 |
| HaeII | RGCGCY | 1 cut(s) | 58 |
| HapII | CCGG | 9 cut(s) | 264, 512, 774, 875, 1068, 1253, 1558, 2309, 2804 |
| HgaI | GACGC | 2 cut(s) | 2, 1466 |
| HhaI | GCGC | 2 cut(s) | 57, 1002 |
| Hin1I | GRCGYC | 1 cut(s) | 8 |
| Hin6I | GCGC | 2 cut(s) | 55, 1000 |
| HinP1I | GCGC | 2 cut(s) | 55, 1000 |
| HincII | GTYRAC | 4 cut(s) | 46, 2548, 3331, 3715 |
| HindII | GTYRAC | 4 cut(s) | 46, 2548, 3331, 3715 |
| HindIII | AAGCTT | 1 cut(s) | 3202 |
| HpaII | CCGG | 9 cut(s) | 264, 512, 774, 875, 1068, 1253, 1558, 2309, 2804 |
| Hpy188I | TCNGA | 9 cut(s) | 21, 1494, 1621, 1894, 1994, 2750, 3393, 3406, 3487 |
| Hpy99I | CGWCG | 5 cut(s) | 13, 18, 21, 461, 1356 |
| HpyCH4IV | ACGT | 4 cut(s) | 1390, 2434, 2818, 3469 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 541, 864, 1690, 1872, 1885, 1934, 3201, 3702, 3728 |
| HpySE526I | ACGT | 4 cut(s) | 1390, 2434, 2818, 3469 |
| Hsp92I | GRCGYC | 1 cut(s) | 8 |
| HspAI | GCGC | 2 cut(s) | 55, 1000 |
| KflI | GGGWCCC | 1 cut(s) | 508 |
| Kpn2I | TCCGGA | 3 cut(s) | 1252, 2308, 2803 |
| Ksp22I | TGATCA | 1 cut(s) | 1795 |
| Kzo9I | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| LmnI | GCTCC | 8 cut(s) | 320, 700, 877, 1196, 1318, 2317, 3290, 3397 |
| Lsp1109I | GCAGC | 3 cut(s) | 1859, 2059, 2383 |
| MaeII | ACGT | 4 cut(s) | 1390, 2434, 2818, 3469 |
| MalI | GATC | 7 cut(s) | 368, 500, 1044, 1347, 1587, 1797, 2732 |
| MbiI | CCGCTC | 3 cut(s) | 795, 1519, 2320 |
| MboI | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| MfeI | CAATTG | 4 cut(s) | 1799, 2141, 2975, 3021 |
| MflI | RGATCY | 1 cut(s) | 1345 |
| MhlI | GDGCHC | 3 cut(s) | 741, 1930, 2883 |
| MlsI | TGGCCA | 2 cut(s) | 1095, 3195 |
| MluNI | TGGCCA | 2 cut(s) | 1095, 3195 |
| MlyI | GAGTC | 8 cut(s) | 764, 2060, 2111, 2637, 2639, 2684, 2915, 3893 |
| MmeI | TCCRAC | 7 cut(s) | 363, 366, 459, 1713, 2728, 3192, 3613 |
| Mox20I | TGGCCA | 2 cut(s) | 1095, 3195 |
| MroI | TCCGGA | 3 cut(s) | 1252, 2308, 2803 |
| MroXI | GAANNNNTTC | 6 cut(s) | 527, 1262, 2755, 3139, 3510, 3553 |
| MscI | TGGCCA | 2 cut(s) | 1095, 3195 |
| MslI | CAYNNNNRTG | 3 cut(s) | 569, 1839, 3893 |
| Msp20I | TGGCCA | 2 cut(s) | 1095, 3195 |
| MspA1I | CMGCKG | 1 cut(s) | 2072 |
| MspI | CCGG | 9 cut(s) | 264, 512, 774, 875, 1068, 1253, 1558, 2309, 2804 |
| MspR9I | CCNGG | 9 cut(s) | 264, 512, 1068, 1291, 1559, 1976, 2234, 3687, 3775 |
| MunI | CAATTG | 4 cut(s) | 1799, 2141, 2975, 3021 |
| Mva1269I | GAATGC | 1 cut(s) | 2371 |
| MvaI | CCWGG | 5 cut(s) | 1291, 1976, 2234, 3687, 3775 |
| MvnI | CGCG | 1 cut(s) | 13 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 541, 864, 1690, 1872, 1885, 1934, 3201, 3702, 3728 |
| NciI | CCSGG | 4 cut(s) | 264, 512, 1068, 1559 |
| NdeI | CATATG | 2 cut(s) | 3618, 3793 |
| NdeII | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| NlaIV | GGNNCC | 6 cut(s) | 509, 510, 738, 879, 2852, 3046 |
| NmeAIII | GCCGAG | 1 cut(s) | 3569 |
| NmuCI | GTSAC | 6 cut(s) | 686, 767, 870, 1477, 2740, 2986 |
| NspI | RCATGY | 3 cut(s) | 2463, 3627, 3696 |
| NspV | TTCGAA | 1 cut(s) | 251 |
| OliI | CACNNNNGTG | 1 cut(s) | 569 |
| PaeI | GCATGC | 2 cut(s) | 3627, 3696 |
| PaeR7I | CTCGAG | 1 cut(s) | 2839 |
| PagI | TCATGA | 3 cut(s) | 2620, 3066, 3871 |
| PaqCI | CACCTGC | 1 cut(s) | 1898 |
| PceI | AGGCCT | 2 cut(s) | 1630, 1970 |
| PciI | ACATGT | 1 cut(s) | 2459 |
| PctI | GAATGC | 1 cut(s) | 2371 |
| PdmI | GAANNNNTTC | 6 cut(s) | 527, 1262, 2755, 3139, 3510, 3553 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2024 |
| PfoI | TCCNGGA | 3 cut(s) | 510, 1066, 1974 |
| PkrI | GCNGC | 3 cut(s) | 1874, 2074, 2398 |
| PleI | GAGTC | 8 cut(s) | 764, 2060, 2111, 2636, 2639, 2683, 2914, 3893 |
| PpsI | GAGTC | 8 cut(s) | 764, 2060, 2111, 2636, 2639, 2683, 2914, 3893 |
| Ppu21I | YACGTR | 1 cut(s) | 2435 |
| PpuMI | RGGWCCY | 1 cut(s) | 508 |
| PscI | ACATGT | 1 cut(s) | 2459 |
| PsiI | TTATAA | 1 cut(s) | 2222 |
| Psp124BI | GAGCTC | 1 cut(s) | 2883 |
| Psp5II | RGGWCCY | 1 cut(s) | 508 |
| Psp6I | CCWGG | 5 cut(s) | 1289, 1974, 2232, 3685, 3773 |
| PspFI | CCCAGC | 1 cut(s) | 311 |
| PspGI | CCWGG | 5 cut(s) | 1289, 1974, 2232, 3685, 3773 |
| PspN4I | GGNNCC | 6 cut(s) | 509, 510, 738, 879, 2852, 3046 |
| PspPI | GGNCC | 8 cut(s) | 21, 508, 548, 2850, 3044, 3118, 3221, 3535 |
| PspPPI | RGGWCCY | 1 cut(s) | 508 |
| PstI | CTGCAG | 3 cut(s) | 1218, 2995, 3307 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1481, 3410 |
| PsuI | RGATCY | 1 cut(s) | 1345 |
| PvuII | CAGCTG | 1 cut(s) | 2072 |
| RsaI | GTAC | 8 cut(s) | 401, 455, 1058, 2642, 2846, 3093, 3157, 3385 |
| RsaNI | GTAC | 8 cut(s) | 400, 454, 1057, 2641, 2845, 3092, 3156, 3384 |
| RseI | CAYNNNNRTG | 3 cut(s) | 569, 1839, 3893 |
| SacI | GAGCTC | 1 cut(s) | 2883 |
| SatI | GCNGC | 3 cut(s) | 1873, 2073, 2397 |
| Sau3AI | GATC | 7 cut(s) | 366, 498, 1042, 1345, 1585, 1795, 2730 |
| Sau96I | GGNCC | 8 cut(s) | 21, 508, 548, 2850, 3044, 3118, 3221, 3535 |
| SchI | GAGTC | 8 cut(s) | 764, 2060, 2111, 2637, 2639, 2684, 2915, 3893 |
| ScrFI | CCNGG | 9 cut(s) | 264, 512, 1068, 1291, 1559, 1976, 2234, 3687, 3775 |
| SduI | GDGCHC | 3 cut(s) | 741, 1930, 2883 |
| SfcI | CTRYAG | 6 cut(s) | 1214, 1371, 2991, 3303, 3579, 3935 |
| Sfr274I | CTCGAG | 1 cut(s) | 2839 |
| SfuI | TTCGAA | 1 cut(s) | 251 |
| SinI | GGWCC | 5 cut(s) | 21, 508, 2850, 3221, 3535 |
| SlaI | CTCGAG | 1 cut(s) | 2839 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 569, 1839, 3893 |
| SmlI | CTYRAG | 4 cut(s) | 860, 2087, 2839, 3515 |
| SmoI | CTYRAG | 4 cut(s) | 860, 2087, 2839, 3515 |
| SpeI | ACTAGT | 1 cut(s) | 3866 |
| SphI | GCATGC | 2 cut(s) | 3627, 3696 |
| SseBI | AGGCCT | 2 cut(s) | 1630, 1970 |
| SsiI | CCGC | 7 cut(s) | 763, 795, 1519, 2320, 2358, 3503, 3765 |
| SstI | GAGCTC | 1 cut(s) | 2883 |
| StuI | AGGCCT | 2 cut(s) | 1630, 1970 |
| StyD4I | CCNGG | 9 cut(s) | 262, 510, 1066, 1289, 1557, 1974, 2232, 3685, 3773 |
| StyI | CCWWGG | 2 cut(s) | 988, 1024 |
| TaiI | ACGT | 4 cut(s) | 1393, 2437, 2821, 3472 |
| TaqII | GACCGA | 1 cut(s) | 3348 |
| TatI | WGTACW | 2 cut(s) | 1056, 3383 |
| TseFI | GTSAC | 6 cut(s) | 686, 767, 870, 1477, 2740, 2986 |
| TseI | GCWGC | 3 cut(s) | 1872, 2072, 2396 |
| Tsp45I | GTSAC | 6 cut(s) | 686, 767, 870, 1477, 2740, 2986 |
| TspGWI | ACGGA | 4 cut(s) | 84, 3410, 3654, 3736 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2024 |
| VneI | GTGCAC | 1 cut(s) | 1926 |
| VpaK11BI | GGWCC | 5 cut(s) | 21, 508, 2850, 3221, 3535 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 949, 2622 |
| XapI | RAATTY | 7 cut(s) | 1160, 1486, 1495, 1736, 2003, 2282, 3779 |
| XbaI | TCTAGA | 1 cut(s) | 1588 |
| XceI | RCATGY | 3 cut(s) | 2463, 3627, 3696 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2156 |
| XhoI | CTCGAG | 1 cut(s) | 2839 |
| XmiI | GTMKAC | 1 cut(s) | 3242 |
| XmnI | GAANNNNTTC | 6 cut(s) | 527, 1262, 2755, 3139, 3510, 3553 |