Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002380

Physical Location & Seq

Genomic Coordinates Forward (+)

2899913 .. 2906192

Gene Structure 6280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g03140.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGAACAGTCTCTCACCTCTCTTACATACAAAGGTTCCATACCTGAAGCAATAACTGAAGCAAAGAAGCAGAGGAAACTCTTTGTTGTGTATATTTCAGGTAAAAATGACGAGTCTAGTCGTTTGGAAAATTCTACATGGACTGATCTAAATGTGGCGGACTCAGTAGAAAAGTACTGCATTTTATTGCATATCCCTGAAGAAAGCACTGATGCTGCTAATTTTTCTGCAATATACCCACAGAAATCTGTACCTTGTATAACAGCTATCGGATACAATGGTGTACAACTTTGGCAGAATGAGGGTTTTCTCAGTGCTGAAGCTCTGGCGTCCAGTTTAGAGAAGGCATGGTTGGGTCTCCATATCCAGGAAACAACTGCAACTGTATTGAGTGCAGCTCTTGCTTCAAATAAATCCGAACCATCGATTTCTGGGGTTCCTAATGCTGTCTCAACTGGTGAAGAAAGTTCCTCAAGTAAAGCTGTTATCTCCGATCAAGGAAGTTCCTCAAGTACAGCTGTTGAGTCTCCCTTAATTGACACAAATGTTCATTCTCCAGATGCTATAGATGCTGCATCTGACACAGTGATGAAAAATAAAGGTCGTGATTGTAAAATTGAGTCCAGCTCTTCCACCAAATCTGCCCAAGGAGTACATGATGTCGCTATGGAAGACCTGAACAAGTCTGGAGGTGATATTGTTAATCCTGTTGCTGAAGGTGGTTATAGTGGCCCAGAAAAGACCACTGTTAATCATTCATGTGTCTCAGGAGAAGGTTCACAAGCAGTTAGTAATGTAAAATCTGAAGTTGTACAAGTTGATAAGGGTGAAGTTGAAGATGATAAGAAGGTTGAGACCTTCGAGAATTGTACGAGGGTCAGCAGATCAAGTGATGTTCACTTGAATATACGATTGCCCAATGGTGTTAGCCTGAAAGAGAAGTTTTCTATAACAAGCACCATGAGAATGGTTAAAAACTATGTTGATGAAAACCAAGGAAGTGGTATTGGCAACTATGATCTAGCCATCCCTTATCCTCGCAAGATATTCTGTGATCAAGATTTAAGCAAATCGTTATCAGATTTGGGCCTGTTTGACAGGCAAGCATTGATAGTGGTTCCACGTCAGAAAGGGACTAGTTATCTGAGTGGGACATCTGCATTCTCTGACCAAACAGACTCGAGAAATACTGTTAGTTCCTCAGATGGAAGCAATGGGGGATATTTTTCGTATGTGAAAAGACTTTTATCATACTTTAATCCTCTTTCTTATTTGGGCAGTGGTGCTAGCTCATCAAGTTCGGGACAGCAATCCGAAAATGGCACGTGGGAATATAGCCCAAACCCTACACGTCGGAATAGTGTCACTCAAAACGCTTCTACAAGTGGTAAAAGTGAGGAGAAAAAGAGCAGGAAGCCACCAGCATCCGGTTTTGGAAGTAACATTCACACTTTGAAACGCGACGAAGATGATGAGCGGTTCAGTGATAGAAATTCCTTCTGGAATGGTAATTCTACCGAGTATGGCGGCAACGATGATGGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034976 GO:0036003 GO:0036503 GO:0042221 GO:0043161 GO:0043170 GO:0043618 GO:0043620 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045893 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902680 GO:1903506 GO:1903508 GO:1990440 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBX

Protein Analysis

516

Amino Acids

55.37

Weight (kDa)

5.06

Isoelectric Point (pI)

40.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43210 AT2G43210 AT2G43210
fragaria_vesca	FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270
malus_domestica	MD04G1038600.v1.1
prunus_persica	Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1
pyrus_communis	pycom04g03140
rosa_chinensis	RchiOBHm_Chr4g0407361
rosa_laevigata	RLG00000008730
rosa_multiflora	Rmu_sc0014661.1_g000002
rosa_roxburghii	Rroxscaffold_5G00351900
rosa_rugosa	Rorug04G0078800
rosa_samantha	Rh4AG143700 Rh4BG141500 Rh4CG150000 Rh4DG137600
rosa_wichuraiana	Rw4G011680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1477
AccII	CGCG	1 cut(s)	1461
AciI	CCGC	3 cut(s)	158, 1477, 1527
AcsI	RAATTY	2 cut(s)	130, 1492
AcuI	CTGAAG	6 cut(s)	66, 78, 219, 339, 735, 825
AcvI	CACGTG	1 cut(s)	1326
AcyI	GRCGYC	1 cut(s)	329
AfaI	GTAC	7 cut(s)	176, 252, 285, 514, 654, 813, 871
AfiI	CCNNNNNNNGG	2 cut(s)	367, 1427
AflIII	ACRYGT	1 cut(s)	1349
AgsI	TTSAA	4 cut(s)	408, 836, 904, 1456
AhlI	ACTAGT	1 cut(s)	1136
AjiI	CACGTC	2 cut(s)	1124, 1352
AjnI	CCWGG	1 cut(s)	366
AjuI	GAANNNNNNNTTGG	2 cut(s)	335, 367
AluBI	AGCT	7 cut(s)	266, 323, 398, 482, 518, 627, 1290
AluI	AGCT	7 cut(s)	266, 323, 398, 482, 518, 627, 1290
Alw26I	GTCTC	6 cut(s)	15, 362, 454, 531, 769, 848
Ama87I	CYCGRG	1 cut(s)	1180
AoxI	GGCC	2 cut(s)	730, 1087
ApeKI	GCWGC	3 cut(s)	215, 395, 572
ApoI	RAATTY	2 cut(s)	130, 1492
AspS9I	GGNCC	2 cut(s)	731, 1087
AsuHPI	GGTGA	4 cut(s)	7, 470, 704, 839
AsuNHI	GCTAGC	1 cut(s)	1286
AvaI	CYCGRG	1 cut(s)	1180
BaeI	ACNNNNGTAYC	2 cut(s)	265, 298
BbrPI	CACGTG	1 cut(s)	1326
BbsI	GAAGAC	1 cut(s)	678
BbvI	GCAGC	3 cut(s)	202, 407, 559
BccI	CCATC	4 cut(s)	430, 1034, 1199, 1532
BciT130I	CCWGG	1 cut(s)	368
BciVI	GTATCC	1 cut(s)	266
BclI	TGATCA	1 cut(s)	1054
BcoDI	GTCTC	6 cut(s)	15, 362, 454, 531, 769, 848
BcuI	ACTAGT	1 cut(s)	1136
BfaI	CTAG	4 cut(s)	117, 1022, 1137, 1287
BfmI	CTRYAG	1 cut(s)	564
BfuI	GTATCC	1 cut(s)	266
BisI	GCNGC	4 cut(s)	216, 396, 573, 1528
BlsI	GCNGC	4 cut(s)	217, 397, 574, 1529
BmcAI	AGTACT	1 cut(s)	176
Bme1390I	CCNGG	1 cut(s)	368
BmeT110I	CYCGRG	1 cut(s)	1180
BmgBI	CACGTC	2 cut(s)	1124, 1352
BmgT120I	GGNCC	2 cut(s)	731, 1087
BmiI	GGNNCC	3 cut(s)	37, 438, 1119
BmrFI	CCNGG	1 cut(s)	368
BmsI	GCATC	5 cut(s)	202, 550, 559, 584, 1433
BmtI	GCTAGC	1 cut(s)	1290
BpiI	GAAGAC	1 cut(s)	678
BplI	GAGNNNNNCTC	4 cut(s)	382, 414, 611, 643
BpmI	CTGGAG	2 cut(s)	540, 708
BpuEI	CTTGAG	2 cut(s)	457, 493
Bsa29I	ATCGAT	1 cut(s)	425
BsaAI	YACGTR	1 cut(s)	1326
BsaHI	GRCGYC	1 cut(s)	329
BsaI	GGTCTC	2 cut(s)	362, 848
BsaJI	CCNNGG	2 cut(s)	646, 994
BsaWI	WCCGGW	1 cut(s)	1427
Bsc4I	CCNNNNNNNGG	2 cut(s)	367, 1427
Bse1I	ACTGG	2 cut(s)	333, 460
Bse3DI	GCAATG	1 cut(s)	1219
BseBI	CCWGG	1 cut(s)	368
BseCI	ATCGAT	1 cut(s)	425
BseDI	CCNNGG	2 cut(s)	646, 994
BseGI	GGATG	2 cut(s)	1026, 1424
BseLI	CCNNNNNNNGG	2 cut(s)	367, 1427
BseMI	GCAATG	1 cut(s)	1219
BseMII	CTCAG	5 cut(s)	177, 325, 780, 1136, 1215
BseNI	ACTGG	2 cut(s)	333, 460
BseRI	GAGGAG	1 cut(s)	1412
BseXI	GCAGC	3 cut(s)	202, 407, 559
BsgI	GTGCAG	1 cut(s)	414
Bsh1236I	CGCG	1 cut(s)	1461
BshFI	GGCC	2 cut(s)	732, 1089
BshVI	ATCGAT	1 cut(s)	425
BsiHKCI	CYCGRG	1 cut(s)	1180
BsiSI	CCGG	1 cut(s)	1428
BslFI	GGGAC	3 cut(s)	1147, 1165, 1317
BslI	CCNNNNNNNGG	2 cut(s)	367, 1427
BsmAI	GTCTC	6 cut(s)	15, 362, 454, 531, 769, 848
BsmFI	GGGAC	3 cut(s)	1147, 1165, 1317
BsmI	GAATGC	1 cut(s)	1160
BsnI	GGCC	2 cut(s)	732, 1089
Bso31I	GGTCTC	2 cut(s)	362, 848
BsoBI	CYCGRG	1 cut(s)	1180
Bsp1407I	TGTACA	2 cut(s)	283, 811
Bsp143I	GATC	5 cut(s)	145, 493, 884, 1018, 1054
BspACI	CCGC	3 cut(s)	158, 1477, 1527
BspANI	GGCC	2 cut(s)	732, 1089
BspCNI	CTCAG	5 cut(s)	176, 324, 779, 1137, 1214
BspDI	ATCGAT	1 cut(s)	425
BspFNI	CGCG	1 cut(s)	1461
BspLI	GGNNCC	3 cut(s)	37, 438, 1119
BspOI	GCTAGC	1 cut(s)	1290
BspQI	GCTCTTC	1 cut(s)	634
BspTNI	GGTCTC	2 cut(s)	362, 848
BsrBI	CCGCTC	1 cut(s)	1477
BsrDI	GCAATG	1 cut(s)	1219
BsrGI	TGTACA	2 cut(s)	283, 811
BsrI	ACTGG	2 cut(s)	333, 460
BssECI	CCNNGG	2 cut(s)	646, 994
BssMI	GATC	5 cut(s)	145, 493, 884, 1018, 1054
BssNI	GRCGYC	1 cut(s)	329
BssT1I	CCWWGG	2 cut(s)	646, 994
Bst2UI	CCWGG	1 cut(s)	368
Bst4CI	ACNGT	5 cut(s)	9, 385, 586, 748, 1192
Bst6I	CTCTTC	1 cut(s)	634
BstACI	GRCGYC	1 cut(s)	329
BstAPI	GCANNNNNTGC	1 cut(s)	401
BstAUI	TGTACA	2 cut(s)	283, 811
BstBAI	YACGTR	1 cut(s)	1326
BstC8I	GCNNGC	2 cut(s)	1104, 1288
BstDEI	CTNAG	5 cut(s)	163, 311, 766, 1145, 1201
BstF5I	GGATG	2 cut(s)	1026, 1424
BstFNI	CGCG	1 cut(s)	1461
BstKTI	GATC	5 cut(s)	148, 496, 887, 1021, 1057
BstMAI	GTCTC	6 cut(s)	15, 362, 454, 531, 769, 848
BstMBI	GATC	5 cut(s)	145, 493, 884, 1018, 1054
BstMWI	GCNNNNNNNGC	2 cut(s)	401, 569
BstNI	CCWGG	1 cut(s)	368
BstSCI	CCNGG	1 cut(s)	366
BstSFI	CTRYAG	1 cut(s)	564
BstUI	CGCG	1 cut(s)	1461
BstV1I	GCAGC	3 cut(s)	202, 407, 559
BstV2I	GAAGAC	1 cut(s)	678
BstXI	CCANNNNNNTGG	2 cut(s)	967, 1001
Bsu15I	ATCGAT	1 cut(s)	425
BsuI	GTATCC	1 cut(s)	266
BsuRI	GGCC	2 cut(s)	732, 1089
BsuTUI	ATCGAT	1 cut(s)	425
BtrI	CACGTC	2 cut(s)	1124, 1352
BtsCI	GGATG	2 cut(s)	1026, 1424
BtsI	GCAGTG	1 cut(s)	1285
BtsIMutI	CAGTG	6 cut(s)	207, 319, 591, 744, 1285, 1489
Cac8I	GCNNGC	2 cut(s)	1104, 1288
Cfr13I	GGNCC	2 cut(s)	731, 1087
ClaI	ATCGAT	1 cut(s)	425
CseI	GACGC	1 cut(s)	318
Csp6I	GTAC	7 cut(s)	175, 251, 284, 513, 653, 812, 870
CviAII	CATG	5 cut(s)	138, 348, 656, 759, 961
CviQI	GTAC	7 cut(s)	175, 251, 284, 513, 653, 812, 870
DdeI	CTNAG	5 cut(s)	163, 311, 766, 1145, 1201
DpnI	GATC	5 cut(s)	147, 495, 886, 1020, 1056
DpnII	GATC	5 cut(s)	145, 493, 884, 1018, 1054
Eam1104I	CTCTTC	1 cut(s)	634
EarI	CTCTTC	1 cut(s)	634
EciI	GGCGGA	1 cut(s)	173
Eco130I	CCWWGG	2 cut(s)	646, 994
Eco31I	GGTCTC	2 cut(s)	362, 848
Eco57I	CTGAAG	6 cut(s)	66, 78, 219, 339, 735, 825
Eco72I	CACGTG	1 cut(s)	1326
Eco88I	CYCGRG	1 cut(s)	1180
EcoRII	CCWGG	1 cut(s)	366
EcoT14I	CCWWGG	2 cut(s)	646, 994
ErhI	CCWWGG	2 cut(s)	646, 994
FaeI	CATG	5 cut(s)	141, 351, 659, 762, 964
FaqI	GGGAC	3 cut(s)	1147, 1165, 1317
FatI	CATG	5 cut(s)	137, 347, 655, 758, 960
FbaI	TGATCA	1 cut(s)	1054
Fnu4HI	GCNGC	4 cut(s)	216, 396, 573, 1528
FokI	GGATG	2 cut(s)	1013, 1411
Fsp4HI	GCNGC	4 cut(s)	216, 396, 573, 1528
FspBI	CTAG	4 cut(s)	117, 1022, 1137, 1287
GluI	GCNGC	4 cut(s)	216, 396, 573, 1528
GsuI	CTGGAG	2 cut(s)	540, 708
HaeIII	GGCC	2 cut(s)	732, 1089
HapII	CCGG	1 cut(s)	1428
HgaI	GACGC	1 cut(s)	318
Hin1I	GRCGYC	1 cut(s)	329
Hin1II	CATG	5 cut(s)	141, 351, 659, 762, 964
HinfI	GANTC	5 cut(s)	113, 161, 524, 620, 1178
HpaII	CCGG	1 cut(s)	1428
HphI	GGTGA	4 cut(s)	7, 470, 704, 839
Hpy166II	GTNNAC	3 cut(s)	284, 779, 898
Hpy188III	TCNNGA	9 cut(s)	557, 605, 687, 768, 862, 1058, 1182, 1302, 1501
Hpy8I	GTNNAC	3 cut(s)	284, 779, 898
Hpy99I	CGWCG	2 cut(s)	1356, 1466
HpyAV	CCTTC	6 cut(s)	337, 710, 767, 841, 868, 1507
HpyCH4III	ACNGT	5 cut(s)	9, 385, 586, 748, 1192
HpyCH4IV	ACGT	3 cut(s)	1123, 1325, 1351
HpyCH4V	TGCA	7 cut(s)	180, 190, 230, 380, 395, 575, 1160
HpyF10VI	GCNNNNNNNGC	2 cut(s)	401, 569
HpyF3I	CTNAG	5 cut(s)	163, 311, 766, 1145, 1201
HpySE526I	ACGT	3 cut(s)	1123, 1325, 1351
Hsp92I	GRCGYC	1 cut(s)	329
Hsp92II	CATG	5 cut(s)	141, 351, 659, 762, 964
Ksp22I	TGATCA	1 cut(s)	1054
Kzo9I	GATC	5 cut(s)	145, 493, 884, 1018, 1054
LguI	GCTCTTC	1 cut(s)	634
Lsp1109I	GCAGC	3 cut(s)	202, 407, 559
LweI	GCATC	5 cut(s)	202, 550, 559, 584, 1433
MaeI	CTAG	4 cut(s)	117, 1022, 1137, 1287
MaeII	ACGT	3 cut(s)	1123, 1325, 1351
MaeIII	GTNAC	2 cut(s)	1363, 1439
MalI	GATC	5 cut(s)	147, 495, 886, 1020, 1056
MbiI	CCGCTC	1 cut(s)	1477
MboI	GATC	5 cut(s)	145, 493, 884, 1018, 1054
MboII	GAAGA	6 cut(s)	212, 473, 621, 683, 848, 1478
MluCI	AATT	7 cut(s)	130, 220, 534, 615, 865, 1492, 1510
MlyI	GAGTC	5 cut(s)	122, 155, 533, 629, 1172
MmeI	TCCRAC	1 cut(s)	1334
MseI	TTAA	6 cut(s)	533, 702, 750, 972, 1064, 1257
MslI	CAYNNNNRTG	3 cut(s)	587, 759, 965
MspA1I	CMGCKG	1 cut(s)	518
MspI	CCGG	1 cut(s)	1428
MspR9I	CCNGG	1 cut(s)	368
Mva1269I	GAATGC	1 cut(s)	1160
MvaI	CCWGG	1 cut(s)	368
MvnI	CGCG	1 cut(s)	1461
MwoI	GCNNNNNNNGC	2 cut(s)	401, 569
NdeII	GATC	5 cut(s)	145, 493, 884, 1018, 1054
NheI	GCTAGC	1 cut(s)	1286
NlaIII	CATG	5 cut(s)	141, 351, 659, 762, 964
NlaIV	GGNNCC	3 cut(s)	37, 438, 1119
NmuCI	GTSAC	1 cut(s)	1363
PaeR7I	CTCGAG	1 cut(s)	1180
PciSI	GCTCTTC	1 cut(s)	634
PctI	GAATGC	1 cut(s)	1160
PfoI	TCCNGGA	1 cut(s)	366
PkrI	GCNGC	4 cut(s)	217, 397, 574, 1529
PleI	GAGTC	5 cut(s)	121, 155, 532, 628, 1172
PmaCI	CACGTG	1 cut(s)	1326
PmlI	CACGTG	1 cut(s)	1326
PpsI	GAGTC	5 cut(s)	121, 155, 532, 628, 1172
Ppu21I	YACGTR	1 cut(s)	1326
Psp6I	CCWGG	1 cut(s)	366
PspCI	CACGTG	1 cut(s)	1326
PspGI	CCWGG	1 cut(s)	366
PspN4I	GGNNCC	3 cut(s)	37, 438, 1119
PspPI	GGNCC	2 cut(s)	731, 1087
PvuII	CAGCTG	1 cut(s)	518
RsaI	GTAC	7 cut(s)	176, 252, 285, 514, 654, 813, 871
RsaNI	GTAC	7 cut(s)	175, 251, 284, 513, 653, 812, 870
RseI	CAYNNNNRTG	3 cut(s)	587, 759, 965
SapI	GCTCTTC	1 cut(s)	634
SaqAI	TTAA	6 cut(s)	533, 702, 750, 972, 1064, 1257
SatI	GCNGC	4 cut(s)	216, 396, 573, 1528
Sau3AI	GATC	5 cut(s)	145, 493, 884, 1018, 1054
Sau96I	GGNCC	2 cut(s)	731, 1087
ScaI	AGTACT	1 cut(s)	176
SchI	GAGTC	5 cut(s)	122, 155, 533, 629, 1172
ScrFI	CCNGG	1 cut(s)	368
SfaNI	GCATC	5 cut(s)	202, 550, 559, 584, 1433
SfcI	CTRYAG	1 cut(s)	564
Sfr274I	CTCGAG	1 cut(s)	1180
SlaI	CTCGAG	1 cut(s)	1180
SmiMI	CAYNNNNRTG	3 cut(s)	587, 759, 965
SmlI	CTYRAG	3 cut(s)	472, 508, 1180
SmoI	CTYRAG	3 cut(s)	472, 508, 1180
SpeI	ACTAGT	1 cut(s)	1136
Sse9I	AATT	7 cut(s)	130, 220, 534, 615, 865, 1492, 1510
SsiI	CCGC	3 cut(s)	158, 1477, 1527
SspMI	CTAG	4 cut(s)	117, 1022, 1137, 1287
StyD4I	CCNGG	1 cut(s)	366
StyI	CCWWGG	2 cut(s)	646, 994
TaaI	ACNGT	5 cut(s)	9, 385, 586, 748, 1192
TaiI	ACGT	3 cut(s)	1126, 1328, 1354
TaqI	TCGA	3 cut(s)	425, 861, 1181
TasI	AATT	7 cut(s)	130, 220, 534, 615, 865, 1492, 1510
TatI	WGTACW	5 cut(s)	174, 283, 512, 652, 811
TauI	GCSGC	1 cut(s)	1530
Tru1I	TTAA	6 cut(s)	533, 702, 750, 972, 1064, 1257
Tru9I	TTAA	6 cut(s)	533, 702, 750, 972, 1064, 1257
TscAI	CASTG	6 cut(s)	214, 319, 591, 751, 1285, 1489
TseFI	GTSAC	1 cut(s)	1363
TseI	GCWGC	3 cut(s)	215, 395, 572
Tsp45I	GTSAC	1 cut(s)	1363
TspDTI	ATGAA	4 cut(s)	539, 605, 747, 1002
TspRI	CASTG	6 cut(s)	214, 319, 591, 751, 1285, 1489
XapI	RAATTY	2 cut(s)	130, 1492
XhoI	CTCGAG	1 cut(s)	1180
XspI	CTAG	4 cut(s)	117, 1022, 1137, 1287
ZrmI	AGTACT	1 cut(s)	176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.