Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0002380

Physical Location & Seq

Genomic Coordinates Forward (+)

27413217 .. 27421220

Gene Structure 8004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG137600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGAACAGTCTCTGAGCTCTCTTGCATACAAGGGTTCTATACCTGAAGCAATCACTGAAGCAAAGAAGCAGAGGAAACTTTTTGTCGTGTATATTTCAGGTCAAGATTCTGACTCTAGTCATTTGGAAAACTCCACATGGACTGATCTAAATGTTGCAGTCTCCGTATCAAAGTACTGCATCTTATTGCATATTCTTGAAGAAAGCACTGATGCTGCAAACTTTTCTGCAATATACCCACAGAAATCAGCACCATGTATAACAGCGATTGGATTCAATGGTGTACAACTTTGGCAAAATGAGGGTTTTGTCAGTGCTGAAGTTCTGGCGTCTAGTTTAGAGAAGGTGTGGTTGAGTCTACAGATCCAGGAAACAGCTGCAACTGTCATGAGTGCAGCAGCTCTTGCTTCAAAGAAATCTGAACCATCTATTTCCGGGATTCCTACTACTACCTCAACTGATGGAAGTTCCTCAAGTACAGGTGTTCTCTCTGATCAAGGAAGTTCCTCAAGTACGGTTGTTCCATTGTCTTTAACAGACAAAAATGGTCAATCACAAGATGCTGTGGAGGGCGCCCCTAACATGATGAACGAAAGTAAAGGTCCTGATTGCAAATTTGAGGATAAAACCAAGGATTTAAGAGACAAGACATCTTTGAAACCAGTTGATGGTGATGAGTTAAAGTGTGTCGGGGAAAAACAGTCCAGCAGCAGCTCTTCCACTGAAGCTGGCCAAGGATCACAGGATGTTGCTATAAAAGAGAGCACTTCTGGAGGCGACCATATTTCTTCCATTACTGAAGGTGGAAGCCCCAGAGGGATCACAGTTAATCAATCTGTCTTGGTAGGAGGTTCACAAGCATCTATTGTTGGAGAAAATGAAACTTTGAAAATTGGAAACAGTGAAGCTGAAGATGATAAGAGGGTTGATGGATCAAGTGATGCTCACTACCTCAGAGAGCTCACTGTTAATCAATCTGGTATCTTAGGAGGAGGTTCACAAGCATTTAGTATTGAAGAAAATGAAGCTCTGCAAGTTGTAAAGGGTGAAGCTGAAGACCTTAAGAAGGTTGATGCAGTTGAAAATGCTAGAAGGGTGAATAGATCAAGTGATGCTTATTTGAATATCCGATTACCCGATGGTACCAGCCTGCAAGAGATGTTTTCTTTGACAAGCACTTTAAGAATTGTCAAAGGGTATATTGATGAAAACCAAGGAAGTGGTATCGGTAGTTATGACCTAGCCATCCCTTATCCTCGCAAGGTATTCACTGAGCAAGGTGAGACATGCTGGATACGTGTTACCTACTTTTTCATGTGTTTAGAAATAACTATTGCATTATTTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034976 GO:0036003 GO:0036503 GO:0042221 GO:0043161 GO:0043170 GO:0043618 GO:0043620 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045893 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902680 GO:1903506 GO:1903508 GO:1990440 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBX

Protein Analysis

449

Amino Acids

47.89

Weight (kDa)

4.64

Isoelectric Point (pI)

46.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBX7_N	PF23187	9 - 91	8.3e-09	UBX7 N-terminal domain
UBX	PF00789	369 - 427	5.7e-12	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43210 AT2G43210 AT2G43210
fragaria_vesca	FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270
malus_domestica	MD04G1038600.v1.1
prunus_persica	Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1
pyrus_communis	pycom04g03140
rosa_chinensis	RchiOBHm_Chr4g0407361
rosa_laevigata	RLG00000008730
rosa_multiflora	Rmu_sc0014661.1_g000002
rosa_roxburghii	Rroxscaffold_5G00351900
rosa_rugosa	Rorug04G0078800
rosa_samantha	Rh4AG143700 Rh4BG141500 Rh4CG150000 Rh4DG137600
rosa_wichuraiana	Rw4G011680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1142
AccB1I	GGYRCC	2 cut(s)	572, 1142
AccB7I	CCANNNNNTGG	1 cut(s)	668
AccI	GTMKAC	1 cut(s)	358
AclWI	GGATC	4 cut(s)	358, 745, 827, 940
AcoI	YGGCCR	1 cut(s)	730
AcsI	RAATTY	1 cut(s)	614
AcuI	CTGAAG	7 cut(s)	66, 78, 339, 744, 819, 930, 1074
AcyI	GRCGYC	2 cut(s)	329, 573
AfaI	GTAC	5 cut(s)	176, 285, 478, 514, 1144
AfiI	CCNNNNNNNGG	2 cut(s)	668, 1066
AflII	CTTAAG	1 cut(s)	1061
AflIII	ACRYGT	1 cut(s)	1297
AgsI	TTSAA	8 cut(s)	200, 277, 411, 658, 889, 1016, 1082, 1123
AjnI	CCWGG	1 cut(s)	366
AluBI	AGCT	9 cut(s)	18, 377, 401, 714, 728, 908, 961, 1028, 1052
AluI	AGCT	9 cut(s)	18, 377, 401, 714, 728, 908, 961, 1028, 1052
Alw21I	GWGCWC	3 cut(s)	20, 767, 963
Alw26I	GTCTC	4 cut(s)	15, 166, 636, 1277
AlwI	GGATC	4 cut(s)	358, 745, 827, 940
AlwNI	CAGNNNCTG	1 cut(s)	13
AoxI	GGCC	1 cut(s)	730
ApeKI	GCWGC	6 cut(s)	215, 377, 395, 398, 708, 711
ApoI	RAATTY	1 cut(s)	614
Asp718I	GGTACC	1 cut(s)	1142
AspLEI	GCGC	1 cut(s)	575
AspS9I	GGNCC	1 cut(s)	602
AsuC2I	CCSGG	1 cut(s)	436
AsuHPI	GGTGA	4 cut(s)	683, 1058, 1108, 1292
AvaII	GGWCC	1 cut(s)	602
BalI	TGGCCA	1 cut(s)	732
BanI	GGYRCC	2 cut(s)	572, 1142
BanII	GRGCYC	2 cut(s)	20, 963
BbsI	GAAGAC	1 cut(s)	1062
Bbv12I	GWGCWC	3 cut(s)	20, 767, 963
BbvI	GCAGC	6 cut(s)	202, 364, 407, 410, 720, 723
BccI	CCATC	6 cut(s)	433, 455, 662, 923, 1133, 1253
BciT130I	CCWGG	1 cut(s)	368
BciVI	GTATCC	1 cut(s)	1287
BclI	TGATCA	1 cut(s)	493
BcnI	CCSGG	1 cut(s)	436
BcoDI	GTCTC	4 cut(s)	15, 166, 636, 1277
BfaI	CTAG	4 cut(s)	117, 333, 1089, 1241
BfmI	CTRYAG	1 cut(s)	359
BfoI	RGCGCY	1 cut(s)	576
BfrI	CTTAAG	1 cut(s)	1061
BfuI	GTATCC	1 cut(s)	1287
BisI	GCNGC	6 cut(s)	216, 378, 396, 399, 709, 712
BlsI	GCNGC	6 cut(s)	217, 379, 397, 400, 710, 713
BmcAI	AGTACT	1 cut(s)	176
Bme1390I	CCNGG	2 cut(s)	368, 436
Bme18I	GGWCC	1 cut(s)	602
BmgT120I	GGNCC	1 cut(s)	602
BmiI	GGNNCC	2 cut(s)	574, 1144
BmrFI	CCNGG	2 cut(s)	368, 436
BmsI	GCATC	7 cut(s)	189, 202, 550, 869, 931, 1063, 1102
BoxI	GACNNNNGTC	1 cut(s)	117
BpiI	GAAGAC	1 cut(s)	1062
BpmI	CTGGAG	1 cut(s)	792
BpuEI	CTTGAG	2 cut(s)	457, 493
BpuMI	CCSGG	1 cut(s)	436
BsaAI	YACGTR	1 cut(s)	1298
BsaHI	GRCGYC	2 cut(s)	329, 573
BsaJI	CCNNGG	3 cut(s)	630, 733, 1213
Bsc4I	CCNNNNNNNGG	2 cut(s)	668, 1066
Bse1I	ACTGG	1 cut(s)	662
BseBI	CCWGG	1 cut(s)	368
BseDI	CCNNGG	3 cut(s)	630, 733, 1213
BseGI	GGATG	2 cut(s)	751, 1245
BseLI	CCNNNNNNNGG	2 cut(s)	668, 1066
BseMII	CTCAG	3 cut(s)	5, 967, 1263
BseNI	ACTGG	1 cut(s)	662
BseRI	GAGGAG	1 cut(s)	1005
BseXI	GCAGC	6 cut(s)	202, 364, 407, 410, 720, 723
BsgI	GTGCAG	1 cut(s)	414
BshFI	GGCC	1 cut(s)	732
BshNI	GGYRCC	2 cut(s)	572, 1142
BsiHKAI	GWGCWC	3 cut(s)	20, 767, 963
BsiSI	CCGG	1 cut(s)	435
BslI	CCNNNNNNNGG	2 cut(s)	668, 1066
BsmAI	GTCTC	4 cut(s)	15, 166, 636, 1277
BsnI	GGCC	1 cut(s)	732
Bsp1286I	GDGCHC	3 cut(s)	20, 767, 963
Bsp1407I	TGTACA	1 cut(s)	283
Bsp143I	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
BspANI	GGCC	1 cut(s)	732
BspCNI	CTCAG	3 cut(s)	6, 966, 1264
BspHI	TCATGA	1 cut(s)	387
BspLI	GGNNCC	2 cut(s)	574, 1144
BspPI	GGATC	4 cut(s)	358, 745, 827, 940
BspQI	GCTCTTC	1 cut(s)	721
BspT107I	GGYRCC	2 cut(s)	572, 1142
BspTI	CTTAAG	1 cut(s)	1061
BsrGI	TGTACA	1 cut(s)	283
BsrI	ACTGG	1 cut(s)	662
BssECI	CCNNGG	3 cut(s)	630, 733, 1213
BssMI	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
BssNI	GRCGYC	2 cut(s)	329, 573
BssT1I	CCWWGG	3 cut(s)	630, 733, 1213
Bst2UI	CCWGG	1 cut(s)	368
Bst4CI	ACNGT	7 cut(s)	9, 385, 517, 702, 826, 902, 967
Bst6I	CTCTTC	1 cut(s)	721
BstACI	GRCGYC	2 cut(s)	329, 573
BstAFI	CTTAAG	1 cut(s)	1061
BstAPI	GCANNNNNTGC	1 cut(s)	404
BstAUI	TGTACA	1 cut(s)	283
BstBAI	YACGTR	1 cut(s)	1298
BstC8I	GCNNGC	2 cut(s)	730, 1151
BstDEI	CTNAG	4 cut(s)	14, 953, 985, 1272
BstENI	CCTNNNNNAGG	1 cut(s)	1064
BstF5I	GGATG	2 cut(s)	751, 1245
BstH2I	RGCGCY	1 cut(s)	576
BstHHI	GCGC	1 cut(s)	575
BstKTI	GATC	7 cut(s)	148, 366, 496, 740, 822, 935, 1106
BstMAI	GTCTC	4 cut(s)	15, 166, 636, 1277
BstMBI	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
BstMWI	GCNNNNNNNGC	1 cut(s)	404
BstNI	CCWGG	1 cut(s)	368
BstNSI	RCATGY	1 cut(s)	1290
BstPAI	GACNNNNGTC	1 cut(s)	117
BstSCI	CCNGG	2 cut(s)	366, 434
BstSFI	CTRYAG	1 cut(s)	359
BstV1I	GCAGC	6 cut(s)	202, 364, 407, 410, 720, 723
BstV2I	GAAGAC	1 cut(s)	1062
BstX2I	RGATCY	1 cut(s)	363
BstXI	CCANNNNNNTGG	1 cut(s)	1220
BstYI	RGATCY	1 cut(s)	363
BsuI	GTATCC	1 cut(s)	1287
BsuRI	GGCC	1 cut(s)	732
BtsCI	GGATG	2 cut(s)	751, 1245
BtsIMutI	CAGTG	7 cut(s)	54, 207, 319, 720, 907, 963, 1269
Cac8I	GCNNGC	2 cut(s)	730, 1151
CaiI	CAGNNNCTG	1 cut(s)	13
CciI	TCATGA	1 cut(s)	387
CfoI	GCGC	1 cut(s)	575
Cfr13I	GGNCC	1 cut(s)	602
CseI	GACGC	1 cut(s)	318
Csp6I	GTAC	5 cut(s)	175, 284, 477, 513, 1143
CviAII	CATG	6 cut(s)	138, 255, 388, 583, 1287, 1315
CviQI	GTAC	5 cut(s)	175, 284, 477, 513, 1143
DdeI	CTNAG	4 cut(s)	14, 953, 985, 1272
DinI	GGCGCC	1 cut(s)	574
DpnI	GATC	7 cut(s)	147, 365, 495, 739, 821, 934, 1105
DpnII	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
EaeI	YGGCCR	1 cut(s)	730
Eam1104I	CTCTTC	1 cut(s)	721
EarI	CTCTTC	1 cut(s)	721
Ecl136II	GAGCTC	2 cut(s)	18, 961
Eco130I	CCWWGG	3 cut(s)	630, 733, 1213
Eco24I	GRGCYC	2 cut(s)	20, 963
Eco47I	GGWCC	1 cut(s)	602
Eco53kI	GAGCTC	2 cut(s)	18, 961
Eco57I	CTGAAG	7 cut(s)	66, 78, 339, 744, 819, 930, 1074
EcoICRI	GAGCTC	2 cut(s)	18, 961
EcoNI	CCTNNNNNAGG	1 cut(s)	1064
EcoO109I	RGGNCCY	1 cut(s)	602
EcoRII	CCWGG	1 cut(s)	366
EcoT14I	CCWWGG	3 cut(s)	630, 733, 1213
EcoT38I	GRGCYC	2 cut(s)	20, 963
EgeI	GGCGCC	1 cut(s)	574
EheI	GGCGCC	1 cut(s)	574
ErhI	CCWWGG	3 cut(s)	630, 733, 1213
FaeI	CATG	6 cut(s)	141, 258, 391, 586, 1290, 1318
FalI	AAGNNNNNCTT	2 cut(s)	1099, 1131
FatI	CATG	6 cut(s)	137, 254, 387, 582, 1286, 1314
FbaI	TGATCA	1 cut(s)	493
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	6 cut(s)	216, 378, 396, 399, 709, 712
FokI	GGATG	2 cut(s)	758, 1232
FriOI	GRGCYC	2 cut(s)	20, 963
Fsp4HI	GCNGC	6 cut(s)	216, 378, 396, 399, 709, 712
FspBI	CTAG	4 cut(s)	117, 333, 1089, 1241
GlaI	GCGC	1 cut(s)	574
GluI	GCNGC	6 cut(s)	216, 378, 396, 399, 709, 712
GsuI	CTGGAG	1 cut(s)	792
HaeII	RGCGCY	1 cut(s)	576
HaeIII	GGCC	1 cut(s)	732
HapII	CCGG	1 cut(s)	435
HgaI	GACGC	1 cut(s)	318
HhaI	GCGC	1 cut(s)	575
Hin1I	GRCGYC	2 cut(s)	329, 573
Hin1II	CATG	6 cut(s)	141, 258, 391, 586, 1290, 1318
Hin6I	GCGC	1 cut(s)	573
HinP1I	GCGC	1 cut(s)	573
HinfI	GANTC	5 cut(s)	107, 113, 273, 355, 439
HpaII	CCGG	1 cut(s)	435
HphI	GGTGA	4 cut(s)	683, 1058, 1108, 1292
Hpy166II	GTNNAC	4 cut(s)	284, 359, 854, 998
Hpy188I	TCNGA	6 cut(s)	15, 112, 421, 493, 956, 1130
Hpy188III	TCNNGA	5 cut(s)	104, 197, 388, 605, 771
Hpy8I	GTNNAC	4 cut(s)	284, 359, 854, 998
HpyAV	CCTTC	4 cut(s)	337, 794, 1060, 1086
HpyCH4III	ACNGT	7 cut(s)	9, 385, 517, 702, 826, 902, 967
HpyCH4IV	ACGT	1 cut(s)	1297
HpyF10VI	GCNNNNNNNGC	1 cut(s)	404
HpyF3I	CTNAG	4 cut(s)	14, 953, 985, 1272
HpySE526I	ACGT	1 cut(s)	1297
Hsp92I	GRCGYC	2 cut(s)	329, 573
Hsp92II	CATG	6 cut(s)	141, 258, 391, 586, 1290, 1318
HspAI	GCGC	1 cut(s)	573
KasI	GGCGCC	1 cut(s)	572
KpnI	GGTACC	1 cut(s)	1146
Ksp22I	TGATCA	1 cut(s)	493
Kzo9I	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
LguI	GCTCTTC	1 cut(s)	721
Lsp1109I	GCAGC	6 cut(s)	202, 364, 407, 410, 720, 723
LweI	GCATC	7 cut(s)	189, 202, 550, 869, 931, 1063, 1102
MaeI	CTAG	4 cut(s)	117, 333, 1089, 1241
MaeII	ACGT	1 cut(s)	1297
MaeIII	GTNAC	1 cut(s)	1300
MalI	GATC	7 cut(s)	147, 365, 495, 739, 821, 934, 1105
MboI	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
MboII	GAAGA	6 cut(s)	212, 708, 780, 923, 1028, 1067
MflI	RGATCY	1 cut(s)	363
MhlI	GDGCHC	3 cut(s)	20, 767, 963
MlsI	TGGCCA	1 cut(s)	732
MluCI	AATT	3 cut(s)	614, 891, 1185
MluNI	TGGCCA	1 cut(s)	732
Mly113I	GGCGCC	1 cut(s)	573
MlyI	GAGTC	2 cut(s)	107, 364
MmeI	TCCRAC	1 cut(s)	850
Mox20I	TGGCCA	1 cut(s)	732
MscI	TGGCCA	1 cut(s)	732
MseI	TTAA	7 cut(s)	533, 638, 680, 828, 969, 1062, 1181
Msp20I	TGGCCA	1 cut(s)	732
MspA1I	CMGCKG	1 cut(s)	377
MspCI	CTTAAG	1 cut(s)	1061
MspI	CCGG	1 cut(s)	435
MspR9I	CCNGG	2 cut(s)	368, 436
MvaI	CCWGG	1 cut(s)	368
MwoI	GCNNNNNNNGC	1 cut(s)	404
NarI	GGCGCC	1 cut(s)	573
NciI	CCSGG	1 cut(s)	436
NdeII	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
NlaIII	CATG	6 cut(s)	141, 258, 391, 586, 1290, 1318
NlaIV	GGNNCC	2 cut(s)	574, 1144
NspI	RCATGY	1 cut(s)	1290
PagI	TCATGA	1 cut(s)	387
PciSI	GCTCTTC	1 cut(s)	721
PfeI	GAWTC	3 cut(s)	107, 273, 439
PflMI	CCANNNNNTGG	1 cut(s)	668
PfoI	TCCNGGA	2 cut(s)	366, 434
PkrI	GCNGC	6 cut(s)	217, 379, 397, 400, 710, 713
PleI	GAGTC	2 cut(s)	107, 363
PluTI	GGCGCC	1 cut(s)	576
PpsI	GAGTC	2 cut(s)	107, 363
Ppu21I	YACGTR	1 cut(s)	1298
PpuMI	RGGWCCY	1 cut(s)	602
PshAI	GACNNNNGTC	1 cut(s)	117
Psp124BI	GAGCTC	2 cut(s)	20, 963
Psp5II	RGGWCCY	1 cut(s)	602
Psp6I	CCWGG	1 cut(s)	366
PspGI	CCWGG	1 cut(s)	366
PspN4I	GGNNCC	2 cut(s)	574, 1144
PspPI	GGNCC	1 cut(s)	602
PspPPI	RGGWCCY	1 cut(s)	602
PstNI	CAGNNNCTG	1 cut(s)	13
PsuI	RGATCY	1 cut(s)	363
PvuII	CAGCTG	1 cut(s)	377
RsaI	GTAC	5 cut(s)	176, 285, 478, 514, 1144
RsaNI	GTAC	5 cut(s)	175, 284, 477, 513, 1143
SacI	GAGCTC	2 cut(s)	20, 963
SapI	GCTCTTC	1 cut(s)	721
SaqAI	TTAA	7 cut(s)	533, 638, 680, 828, 969, 1062, 1181
SatI	GCNGC	6 cut(s)	216, 378, 396, 399, 709, 712
Sau3AI	GATC	7 cut(s)	145, 363, 493, 737, 819, 932, 1103
Sau96I	GGNCC	1 cut(s)	602
ScaI	AGTACT	1 cut(s)	176
SchI	GAGTC	2 cut(s)	107, 364
ScrFI	CCNGG	2 cut(s)	368, 436
SduI	GDGCHC	3 cut(s)	20, 767, 963
SfaNI	GCATC	7 cut(s)	189, 202, 550, 869, 931, 1063, 1102
SfcI	CTRYAG	1 cut(s)	359
SfoI	GGCGCC	1 cut(s)	574
SinI	GGWCC	1 cut(s)	602
SmlI	CTYRAG	3 cut(s)	472, 508, 1061
SmoI	CTYRAG	3 cut(s)	472, 508, 1061
Sse9I	AATT	3 cut(s)	614, 891, 1185
SspDI	GGCGCC	1 cut(s)	572
SspMI	CTAG	4 cut(s)	117, 333, 1089, 1241
SstI	GAGCTC	2 cut(s)	20, 963
StyD4I	CCNGG	2 cut(s)	366, 434
StyI	CCWWGG	3 cut(s)	630, 733, 1213
TaaI	ACNGT	7 cut(s)	9, 385, 517, 702, 826, 902, 967
TaiI	ACGT	1 cut(s)	1300
TasI	AATT	3 cut(s)	614, 891, 1185
TatI	WGTACW	3 cut(s)	174, 283, 476
TfiI	GAWTC	3 cut(s)	107, 273, 439
Tru1I	TTAA	7 cut(s)	533, 638, 680, 828, 969, 1062, 1181
Tru9I	TTAA	7 cut(s)	533, 638, 680, 828, 969, 1062, 1181
TscAI	CASTG	7 cut(s)	61, 214, 319, 727, 907, 970, 1276
TseI	GCWGC	6 cut(s)	215, 377, 395, 398, 708, 711
TspDTI	ATGAA	5 cut(s)	602, 894, 1038, 1221, 1303
TspGWI	ACGGA	1 cut(s)	154
TspRI	CASTG	7 cut(s)	61, 214, 319, 727, 907, 970, 1276
Van91I	CCANNNNNTGG	1 cut(s)	668
Vha464I	CTTAAG	1 cut(s)	1061
VpaK11BI	GGWCC	1 cut(s)	602
XagI	CCTNNNNNAGG	1 cut(s)	1064
XapI	RAATTY	1 cut(s)	614
XceI	RCATGY	1 cut(s)	1290
XmiI	GTMKAC	1 cut(s)	358
XspI	CTAG	4 cut(s)	117, 333, 1089, 1241
ZrmI	AGTACT	1 cut(s)	176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.