Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002380

Physical Location & Seq

Genomic Coordinates Reverse (-)

35845597 .. 35853142

Gene Structure 7546 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008730

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGAACAGTCTCTGAGCTCTCTTGCATACAAGGGTTCTATACCTGAAGCAATCACTGAAGCAAAGAAGCAGAGGAAACTTTTTGTCGTATATATTTCAGGTCAAGATTCTGACTCTAGTCATTTGGAAAACTCCACATGGACTGATCTAAATGTTGCAGACTCTGTATCAAAGTACTGCATCTTATTGCATATTCCTGAAGAAAGCACTGATGCTGCAAACTTTTCTGCAATATACCCACAGAAATCAGTACCATGTATAACAGCGATTGGATTCAATGGTGTACAGCTTTGGCAAAATGAGGGTTTTGTCAGTGCTGAAGTTCTGGCGTCCAGTTTAGAGAAGGTGTGGTTGAGTCTACAGATCCAGGAAACAACTGCAACTGTTATGAGTGCAGCTCTTGCTTCAAAGAAATCTGAACCATCTATTTCCGGGATTCCTACTACTGCCTCAACTGATGGAAGCTCCTCAAGTACAGCTGTTCTCTCTGATCAAGGAAGTTCCTCAAGTACGGTTGTTCCATTGTCTTCAACAGACAAAAATGGTCAATCACAAAATGCTGTGGGGGGCGGCCCTAACATGATGAACGAAAGTAAGGGTCCTGATTGCAAATTTGAGGATAAAACCAAGGATTTAAGAGACAAGACATCTTTGAAACCAGTTGATGGTGATGAGTTAAACTGTGTTGGTGAAAAACAGTCCAGCAGCAGCTCTTCCACTGAAGCTGGCCAAGGCTCACAGGATGTTGCTATAAAAGAGCTCACTTCTGGAGGCGACCATATTTCTTCCATTACTGAAGGTGGAAGCCCCAGAGGGATCACAGTTAATCAATCTGTCTTGGTAGGAGGTTCACAAGCATCTAGTGTTGGAGAAAATGAAACTTTGAAAATTGGAAACAATGAAGCTGAAGATGATAACAGGGTTGATGCATCAAGTGATGCTCACTACCTCAGAGAACTCACTGTTAATCAATCTATTATTTTGGGCGGAGGTTCACAAACATTTAGTATTGAAGAAAATGAAGTTGTGAAAGTTGTAAAGGGTGAAGCTGAAGACGTTAAGAAGGTTGATGCAGTTGAAAATGCTAGAAGGGTGAATAAATCAAGTGATGCTTATTTGAATATCCGATTACCTGATGGTACCAGCCTGCAACAGATGTTTTCTGTGACAAGCACTTTAAGAATTGTCAAAGGGTATATTGATGAAAACCAAGGAAGTGGTATCGGTAGTTATGACCTAGCCATCCCTTATCCTCGCAAGGTATTCACTGAGCAAGATCTAAGTAAACCATTATCTGAGTTGGGCCTGTATGATAGACAAGCGTTGATAGTGGTTCCACATCAGCAAGGGACTGGTTACCTCGGAGGGAGATCTTCACTCACAGACCAAACAGTTTCAAGAAATATTGTTGATGCCCCAAATGGAAGCAATGGGAGCTACTTTTCGTTTGTGAAGAGAGTTTTGTCTTTCATAAATCCTCTCTCTTATTTAGGTGGTGGTGCCAGCTCATCAAGCTCAGAAGAGCAATCCCAAAATGGCATGTGGCAATATAGCCCAAATCCTACAGTTCGAAATAACTTAACCCAAAGCACTTCTGAAAGTGGTAGAACTGAAGGGAGCCGCAGGCGGCCACCAGCATCTCCTTTTGGAAGTAATATTCACACACTGAAACATGATGAAGATGATGAACGATTCAGTGATAGAAACAAGTTCTGGAATGGTAATTCTACACAGTATGGTGGCGATGATGACAGCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034976 GO:0036003 GO:0036503 GO:0042221 GO:0043161 GO:0043170 GO:0043618 GO:0043620 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045893 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902680 GO:1903506 GO:1903508 GO:1990440 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBX

Protein Analysis

587

Amino Acids

62.68

Weight (kDa)

4.83

Isoelectric Point (pI)

51.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBX7_N	PF23187	9 - 90	2.6e-09	UBX7 N-terminal domain
UBX	PF00789	367 - 445	1.2e-18	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43210 AT2G43210 AT2G43210
fragaria_vesca	FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270 FvH4_4g11270
malus_domestica	MD04G1038600.v1.1
prunus_persica	Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1 Prupe.1G189300_v2.0.a1
pyrus_communis	pycom04g03140
rosa_chinensis	RchiOBHm_Chr4g0407361
rosa_laevigata	RLG00000008730
rosa_multiflora	Rmu_sc0014661.1_g000002
rosa_roxburghii	Rroxscaffold_5G00351900
rosa_rugosa	Rorug04G0078800
rosa_samantha	Rh4AG143700 Rh4BG141500 Rh4CG150000 Rh4DG137600
rosa_wichuraiana	Rw4G011680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1139
AccB1I	GGYRCC	2 cut(s)	1139, 1499
AccB7I	CCANNNNNTGG	1 cut(s)	665
AccI	GTMKAC	1 cut(s)	358
AciI	CCGC	4 cut(s)	570, 987, 1621, 1627
AclWI	GGATC	2 cut(s)	358, 824
AcoI	YGGCCR	2 cut(s)	727, 1628
AcsI	RAATTY	1 cut(s)	611
AcuI	CTGAAG	9 cut(s)	66, 78, 219, 339, 741, 816, 927, 1071, 1632
AcyI	GRCGYC	1 cut(s)	329
AfaI	GTAC	6 cut(s)	176, 252, 285, 475, 511, 1141
AfiI	CCNNNNNNNGG	1 cut(s)	665
AgsI	TTSAA	9 cut(s)	277, 408, 531, 655, 886, 1013, 1079, 1120, 1398
AjnI	CCWGG	1 cut(s)	366
Alw21I	GWGCWC	2 cut(s)	20, 762
Alw26I	GTCTC	2 cut(s)	15, 633
AlwI	GGATC	2 cut(s)	358, 824
AlwNI	CAGNNNCTG	2 cut(s)	13, 164
AoxI	GGCC	4 cut(s)	571, 727, 1303, 1628
ApeKI	GCWGC	4 cut(s)	215, 395, 705, 708
ApoI	RAATTY	1 cut(s)	611
Asp718I	GGTACC	1 cut(s)	1139
AspS9I	GGNCC	3 cut(s)	572, 599, 1303
AsuC2I	CCSGG	1 cut(s)	433
AsuHPI	GGTGA	4 cut(s)	680, 701, 1055, 1105
AsuII	TTCGAA	1 cut(s)	1570
AvaII	GGWCC	1 cut(s)	599
BalI	TGGCCA	1 cut(s)	729
BanI	GGYRCC	2 cut(s)	1139, 1499
BanII	GRGCYC	2 cut(s)	20, 762
BbsI	GAAGAC	2 cut(s)	519, 1059
Bbv12I	GWGCWC	2 cut(s)	20, 762
BbvI	GCAGC	4 cut(s)	202, 407, 717, 720
BccI	CCATC	5 cut(s)	430, 452, 659, 1130, 1250
BciT130I	CCWGG	1 cut(s)	368
BclI	TGATCA	1 cut(s)	490
BcnI	CCSGG	1 cut(s)	433
BcoDI	GTCTC	2 cut(s)	15, 633
BfaI	CTAG	4 cut(s)	117, 861, 1086, 1238
BfmI	CTRYAG	2 cut(s)	359, 1563
BglII	AGATCT	2 cut(s)	1276, 1370
BisI	GCNGC	7 cut(s)	216, 396, 571, 706, 709, 1621, 1628
BlsI	GCNGC	7 cut(s)	217, 397, 572, 707, 710, 1622, 1629
BmcAI	AGTACT	1 cut(s)	176
Bme1390I	CCNGG	2 cut(s)	368, 433
Bme18I	GGWCC	1 cut(s)	599
BmgT120I	GGNCC	3 cut(s)	572, 599, 1303
BmiI	GGNNCC	5 cut(s)	600, 1141, 1335, 1501, 1619
BmrFI	CCNGG	2 cut(s)	368, 433
BoxI	GACNNNNGTC	1 cut(s)	117
BpiI	GAAGAC	2 cut(s)	519, 1059
BplI	GAGNNNNNCTC	2 cut(s)	382, 414
BpmI	CTGGAG	1 cut(s)	789
Bpu14I	TTCGAA	1 cut(s)	1570
BpuEI	CTTGAG	2 cut(s)	454, 490
BpuMI	CCSGG	1 cut(s)	433
BsaHI	GRCGYC	1 cut(s)	329
BsaJI	CCNNGG	4 cut(s)	627, 730, 1210, 1360
Bsc4I	CCNNNNNNNGG	1 cut(s)	665
Bse1I	ACTGG	3 cut(s)	333, 659, 1357
Bse3DI	GCAATG	1 cut(s)	1435
BseBI	CCWGG	1 cut(s)	368
BseDI	CCNNGG	4 cut(s)	627, 730, 1210, 1360
BseGI	GGATG	2 cut(s)	748, 1242
BseLI	CCNNNNNNNGG	1 cut(s)	665
BseMI	GCAATG	1 cut(s)	1435
BseMII	CTCAG	5 cut(s)	5, 964, 1260, 1287, 1530
BseNI	ACTGG	3 cut(s)	333, 659, 1357
BseRI	GAGGAG	1 cut(s)	457
BseXI	GCAGC	4 cut(s)	202, 407, 717, 720
BsgI	GTGCAG	1 cut(s)	414
BshFI	GGCC	4 cut(s)	573, 729, 1305, 1630
BshNI	GGYRCC	2 cut(s)	1139, 1499
BsiHKAI	GWGCWC	2 cut(s)	20, 762
BsiSI	CCGG	1 cut(s)	432
BslFI	GGGAC	1 cut(s)	1363
BslI	CCNNNNNNNGG	1 cut(s)	665
BsmAI	GTCTC	2 cut(s)	15, 633
BsmFI	GGGAC	1 cut(s)	1363
BsnI	GGCC	4 cut(s)	573, 729, 1305, 1630
Bsp119I	TTCGAA	1 cut(s)	1570
Bsp1286I	GDGCHC	2 cut(s)	20, 762
Bsp1407I	TGTACA	1 cut(s)	283
Bsp143I	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
BspACI	CCGC	4 cut(s)	570, 987, 1621, 1627
BspANI	GGCC	4 cut(s)	573, 729, 1305, 1630
BspCNI	CTCAG	5 cut(s)	6, 963, 1261, 1288, 1529
BspLI	GGNNCC	5 cut(s)	600, 1141, 1335, 1501, 1619
BspPI	GGATC	2 cut(s)	358, 824
BspQI	GCTCTTC	2 cut(s)	718, 1515
BspT104I	TTCGAA	1 cut(s)	1570
BspT107I	GGYRCC	2 cut(s)	1139, 1499
BsrDI	GCAATG	1 cut(s)	1435
BsrGI	TGTACA	1 cut(s)	283
BsrI	ACTGG	3 cut(s)	333, 659, 1357
BssECI	CCNNGG	4 cut(s)	627, 730, 1210, 1360
BssMI	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
BssNI	GRCGYC	1 cut(s)	329
BssT1I	CCWWGG	3 cut(s)	627, 730, 1210
Bst2UI	CCWGG	1 cut(s)	368
Bst6I	CTCTTC	3 cut(s)	718, 1448, 1515
BstACI	GRCGYC	1 cut(s)	329
BstAPI	GCANNNNNTGC	1 cut(s)	401
BstAUI	TGTACA	1 cut(s)	283
BstBI	TTCGAA	1 cut(s)	1570
BstC8I	GCNNGC	4 cut(s)	727, 1148, 1504, 1625
BstDEI	CTNAG	6 cut(s)	14, 950, 1269, 1280, 1296, 1516
BstEII	GGTNACC	1 cut(s)	1355
BstF5I	GGATG	2 cut(s)	748, 1242
BstKTI	GATC	6 cut(s)	148, 366, 493, 819, 1279, 1373
BstMAI	GTCTC	2 cut(s)	15, 633
BstMBI	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
BstMWI	GCNNNNNNNGC	3 cut(s)	401, 1434, 1512
BstNI	CCWGG	1 cut(s)	368
BstNSI	RCATGY	1 cut(s)	1543
BstPAI	GACNNNNGTC	1 cut(s)	117
BstPI	GGTNACC	1 cut(s)	1355
BstSCI	CCNGG	2 cut(s)	366, 431
BstSFI	CTRYAG	2 cut(s)	359, 1563
BstV1I	GCAGC	4 cut(s)	202, 407, 717, 720
BstV2I	GAAGAC	2 cut(s)	519, 1059
BstX2I	RGATCY	3 cut(s)	363, 1276, 1370
BstXI	CCANNNNNNTGG	1 cut(s)	1217
BstYI	RGATCY	3 cut(s)	363, 1276, 1370
BsuRI	GGCC	4 cut(s)	573, 729, 1305, 1630
BtsCI	GGATG	2 cut(s)	748, 1242
BtsIMutI	CAGTG	8 cut(s)	54, 207, 319, 717, 960, 1266, 1664, 1702
Cac8I	GCNNGC	4 cut(s)	727, 1148, 1504, 1625
CaiI	CAGNNNCTG	2 cut(s)	13, 164
Cfr13I	GGNCC	3 cut(s)	572, 599, 1303
CseI	GACGC	1 cut(s)	318
Csp6I	GTAC	6 cut(s)	175, 251, 284, 474, 510, 1140
CviAII	CATG	5 cut(s)	138, 255, 580, 1540, 1673
CviQI	GTAC	6 cut(s)	175, 251, 284, 474, 510, 1140
DdeI	CTNAG	6 cut(s)	14, 950, 1269, 1280, 1296, 1516
DpnI	GATC	6 cut(s)	147, 365, 492, 818, 1278, 1372
DpnII	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
EaeI	YGGCCR	2 cut(s)	727, 1628
Eam1104I	CTCTTC	3 cut(s)	718, 1448, 1515
EarI	CTCTTC	3 cut(s)	718, 1448, 1515
EciI	GGCGGA	1 cut(s)	1002
Ecl136II	GAGCTC	2 cut(s)	18, 760
Eco130I	CCWWGG	3 cut(s)	627, 730, 1210
Eco24I	GRGCYC	2 cut(s)	20, 762
Eco47I	GGWCC	1 cut(s)	599
Eco53kI	GAGCTC	2 cut(s)	18, 760
Eco57I	CTGAAG	9 cut(s)	66, 78, 219, 339, 741, 816, 927, 1071, 1632
Eco91I	GGTNACC	1 cut(s)	1355
EcoICRI	GAGCTC	2 cut(s)	18, 760
EcoO109I	RGGNCCY	1 cut(s)	599
EcoO65I	GGTNACC	1 cut(s)	1355
EcoRII	CCWGG	1 cut(s)	366
EcoT14I	CCWWGG	3 cut(s)	627, 730, 1210
EcoT22I	ATGCAT	1 cut(s)	931
EcoT38I	GRGCYC	2 cut(s)	20, 762
ErhI	CCWWGG	3 cut(s)	627, 730, 1210
FaeI	CATG	5 cut(s)	141, 258, 583, 1543, 1676
FalI	AAGNNNNNCTT	2 cut(s)	1096, 1128
FaqI	GGGAC	1 cut(s)	1363
FatI	CATG	5 cut(s)	137, 254, 579, 1539, 1672
FbaI	TGATCA	1 cut(s)	490
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	7 cut(s)	216, 396, 571, 706, 709, 1621, 1628
FokI	GGATG	2 cut(s)	755, 1229
FriOI	GRGCYC	2 cut(s)	20, 762
Fsp4HI	GCNGC	7 cut(s)	216, 396, 571, 706, 709, 1621, 1628
FspBI	CTAG	4 cut(s)	117, 861, 1086, 1238
GluI	GCNGC	7 cut(s)	216, 396, 571, 706, 709, 1621, 1628
GsuI	CTGGAG	1 cut(s)	789
HaeIII	GGCC	4 cut(s)	573, 729, 1305, 1630
HapII	CCGG	1 cut(s)	432
HgaI	GACGC	1 cut(s)	318
Hin1I	GRCGYC	1 cut(s)	329
Hin1II	CATG	5 cut(s)	141, 258, 583, 1543, 1676
HinfI	GANTC	7 cut(s)	107, 113, 161, 273, 355, 436, 1692
HpaII	CCGG	1 cut(s)	432
HphI	GGTGA	4 cut(s)	680, 701, 1055, 1105
Hpy166II	GTNNAC	5 cut(s)	284, 359, 851, 995, 1286
Hpy188III	TCNNGA	6 cut(s)	104, 197, 602, 768, 1398, 1714
Hpy8I	GTNNAC	5 cut(s)	284, 359, 851, 995, 1286
HpyAV	CCTTC	5 cut(s)	337, 791, 1057, 1083, 1607
HpyCH4IV	ACGT	1 cut(s)	1056
HpyF10VI	GCNNNNNNNGC	3 cut(s)	401, 1434, 1512
HpyF3I	CTNAG	6 cut(s)	14, 950, 1269, 1280, 1296, 1516
HpySE526I	ACGT	1 cut(s)	1056
Hsp92I	GRCGYC	1 cut(s)	329
Hsp92II	CATG	5 cut(s)	141, 258, 583, 1543, 1676
KpnI	GGTACC	1 cut(s)	1143
Ksp22I	TGATCA	1 cut(s)	490
Kzo9I	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
LguI	GCTCTTC	2 cut(s)	718, 1515
LmnI	GCTCC	3 cut(s)	470, 1434, 1617
Lsp1109I	GCAGC	4 cut(s)	202, 407, 717, 720
MaeI	CTAG	4 cut(s)	117, 861, 1086, 1238
MaeII	ACGT	1 cut(s)	1056
MaeIII	GTNAC	2 cut(s)	1165, 1355
MalI	GATC	6 cut(s)	147, 365, 492, 818, 1278, 1372
MboI	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
MflI	RGATCY	3 cut(s)	363, 1276, 1370
MhlI	GDGCHC	2 cut(s)	20, 762
MlsI	TGGCCA	1 cut(s)	729
MluCI	AATT	4 cut(s)	611, 888, 1182, 1723
MluNI	TGGCCA	1 cut(s)	729
MlyI	GAGTC	3 cut(s)	107, 155, 364
MmeI	TCCRAC	1 cut(s)	847
Mox20I	TGGCCA	1 cut(s)	729
Mph1103I	ATGCAT	1 cut(s)	931
MscI	TGGCCA	1 cut(s)	729
MseI	TTAA	7 cut(s)	635, 677, 825, 966, 1059, 1178, 1580
Msp20I	TGGCCA	1 cut(s)	729
MspA1I	CMGCKG	1 cut(s)	479
MspI	CCGG	1 cut(s)	432
MspR9I	CCNGG	2 cut(s)	368, 433
MvaI	CCWGG	1 cut(s)	368
MwoI	GCNNNNNNNGC	3 cut(s)	401, 1434, 1512
NciI	CCSGG	1 cut(s)	433
NdeII	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
NlaIII	CATG	5 cut(s)	141, 258, 583, 1543, 1676
NlaIV	GGNNCC	5 cut(s)	600, 1141, 1335, 1501, 1619
NmuCI	GTSAC	1 cut(s)	1165
NsiI	ATGCAT	1 cut(s)	931
NspI	RCATGY	1 cut(s)	1543
NspV	TTCGAA	1 cut(s)	1570
PciSI	GCTCTTC	2 cut(s)	718, 1515
PfeI	GAWTC	4 cut(s)	107, 273, 436, 1692
PflMI	CCANNNNNTGG	1 cut(s)	665
PfoI	TCCNGGA	2 cut(s)	366, 431
PkrI	GCNGC	7 cut(s)	217, 397, 572, 707, 710, 1622, 1629
PleI	GAGTC	3 cut(s)	107, 155, 363
PpsI	GAGTC	3 cut(s)	107, 155, 363
PpuMI	RGGWCCY	1 cut(s)	599
PshAI	GACNNNNGTC	1 cut(s)	117
Psp124BI	GAGCTC	2 cut(s)	20, 762
Psp5II	RGGWCCY	1 cut(s)	599
Psp6I	CCWGG	1 cut(s)	366
PspEI	GGTNACC	1 cut(s)	1355
PspGI	CCWGG	1 cut(s)	366
PspN4I	GGNNCC	5 cut(s)	600, 1141, 1335, 1501, 1619
PspPI	GGNCC	3 cut(s)	572, 599, 1303
PspPPI	RGGWCCY	1 cut(s)	599
PstNI	CAGNNNCTG	2 cut(s)	13, 164
PsuI	RGATCY	3 cut(s)	363, 1276, 1370
PvuII	CAGCTG	1 cut(s)	479
RsaI	GTAC	6 cut(s)	176, 252, 285, 475, 511, 1141
RsaNI	GTAC	6 cut(s)	175, 251, 284, 474, 510, 1140
SacI	GAGCTC	2 cut(s)	20, 762
SapI	GCTCTTC	2 cut(s)	718, 1515
SaqAI	TTAA	7 cut(s)	635, 677, 825, 966, 1059, 1178, 1580
SatI	GCNGC	7 cut(s)	216, 396, 571, 706, 709, 1621, 1628
Sau3AI	GATC	6 cut(s)	145, 363, 490, 816, 1276, 1370
Sau96I	GGNCC	3 cut(s)	572, 599, 1303
ScaI	AGTACT	1 cut(s)	176
SchI	GAGTC	3 cut(s)	107, 155, 364
ScrFI	CCNGG	2 cut(s)	368, 433
SduI	GDGCHC	2 cut(s)	20, 762
SfcI	CTRYAG	2 cut(s)	359, 1563
SfuI	TTCGAA	1 cut(s)	1570
SinI	GGWCC	1 cut(s)	599
SmlI	CTYRAG	2 cut(s)	469, 505
SmoI	CTYRAG	2 cut(s)	469, 505
Sse9I	AATT	4 cut(s)	611, 888, 1182, 1723
SsiI	CCGC	4 cut(s)	570, 987, 1621, 1627
SspI	AATATT	2 cut(s)	1405, 1657
SspMI	CTAG	4 cut(s)	117, 861, 1086, 1238
SstI	GAGCTC	2 cut(s)	20, 762
StyD4I	CCNGG	2 cut(s)	366, 431
StyI	CCWWGG	3 cut(s)	627, 730, 1210
TaiI	ACGT	1 cut(s)	1059
TaqI	TCGA	1 cut(s)	1570
TasI	AATT	4 cut(s)	611, 888, 1182, 1723
TatI	WGTACW	3 cut(s)	174, 283, 473
TauI	GCSGC	3 cut(s)	573, 1623, 1630
TfiI	GAWTC	4 cut(s)	107, 273, 436, 1692
Tru1I	TTAA	7 cut(s)	635, 677, 825, 966, 1059, 1178, 1580
Tru9I	TTAA	7 cut(s)	635, 677, 825, 966, 1059, 1178, 1580
TscAI	CASTG	8 cut(s)	61, 214, 319, 724, 967, 1273, 1671, 1702
TseFI	GTSAC	1 cut(s)	1165
TseI	GCWGC	4 cut(s)	215, 395, 705, 708
Tsp45I	GTSAC	1 cut(s)	1165
TspDTI	ATGAA	8 cut(s)	599, 891, 915, 1035, 1218, 1459, 1692, 1701
TspRI	CASTG	8 cut(s)	61, 214, 319, 724, 967, 1273, 1671, 1702
Van91I	CCANNNNNTGG	1 cut(s)	665
VpaK11BI	GGWCC	1 cut(s)	599
XapI	RAATTY	1 cut(s)	611
XceI	RCATGY	1 cut(s)	1543
XmiI	GTMKAC	1 cut(s)	358
XspI	CTAG	4 cut(s)	117, 861, 1086, 1238
ZrmI	AGTACT	1 cut(s)	176
Zsp2I	ATGCAT	1 cut(s)	931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.