Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0008076

Physical Location & Seq

Genomic Coordinates Reverse (-)

5265604 .. 5272130

Gene Structure 6527 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3141 bp

ATGCGGGGGAATCTGGTGATTGAGGTTGGGGGTTGGGTCCAACTAGCATTGAGTTGGGCTAGGATTTGTGGCCTTTTCCCAAAAAACCGTCGCTCTCTCCCCTTCTCTTACTCTCTCTCGCCCACCTCTGAAGCTTCCCTAAAACCCACCAGCTTCAACCTCACTTCAGCAATTCATCTCTCCAGCGTTTCGTGGGGAATCACCTCTCGCACTCTCGGAGAAATGGATAGGAGATTAAATGGACCAACTGGACCTTCGAGCTCCGTCAATGGCGGCCCAGCCACAAGATCGGGTTCTCATGCTCCGCAAGCTAACTACAATAGTCGAGCTGTTCAGGAAGCATTGGAACAGTTGGCATCCATTGATCTAATTGACTTATGCAATGAATCTAAAGTTGAGTGCTGTCGGGCAACACGAGACTTGAGGAGTTGTGGACGACAAGTAAAGGATGTGCTCATCTCATGTGGACATGCTTCATTATGTGCAGAGTGTAGCCAGCGCTGTGATGTGTGTCCCATTTGTAGAATTCAAATACCAAAGAATGGCGCAAAATTATGCCGACGCCTTTATGATCAGTGTCTAGAAGCTCATCTTATACCCAAAAGATGTGATAAGAGATTTCAAGAGAAAGAAGATGGGGAGGAGCAAATATCTGCTGATGTCCAACGCCTTTATTCTTTATTTGATGTTGCCCTGGAGAATAACTTAGTTTCTTTGATATGCCACTATGTTACAGATGTTTGTTTGGATGAAAGTGCAGTATCCAGCGATCCCGTTATTGCTTTTTTGTTGGATGAAGTGGTTGTGAAGGATTGGTGCAAGCGCACATTCCAGAACATCATCACAGAACTTCAAGGCATTTATAATCTTGAAGCGGAACCGATGAAGTCTATGTTGAGTTTACTTCTTAAGTTCTCAGTACAGTTGGCTGGCATATCCAGTGTGATTGAAGTTTTGGATTCATCTTTGAAAGGGTCTTTTTCAGCTCAGCTTCATGACTTTCACCAGCTTCAAGAGAGCATATTAAAGACAAAGCAGCATATGGAGGTTATGATATGGTGTATAAGACATGAGTTCCTTGAGAAAGTGAGGCCTCGTTATACTGATTTCTCATCGTGGCATTCTCTTGTCCGTGAAAGGAAATCTGCTGCAATTAAGCGTTCTTGGCCTGATTCTGTAAATAACTCTGAAGAGTCCAGTGGACAGGAAGGTACCCTATTTATTGAAGATGCCCTGGTAAATCTGGAGGTTGGGCAGGGAAATACAGAGAAATTGGTGGAGGGATTAAAACTAGGATCTTTGCAGAAGGATGGAGTTTCATCAGTTCTCAGGTCTAAGATAGGAGGGGTTGCAGGATGCTATCCATTTGAAAATGTTCGAGCTGCTGTTGATATACTTTTTCTATGTGGTAGTTCAGATTTGGTGGTTGCGAAGCAAGCTATTTTTCTATATTACCTATTTGATCGGCATTGGACAATGACTGATGAGCAATGGAGACACCTTCTAGACGATTTTGGAGCTACTTTTGGCATACCCAGGCAATTACTACTGGAATCCTTAATCTTTTATCTTTTGGATGATCACACAGATAAAGCTCTGCAGGAAGCTTGTCACCTTCTTCCGGAGATCTCTGGTCCAGCAACTCATCCTAAGATTGCACAAGTACTATTAGAAAGGGGTAATCCTGATACCGCTCTTTTGGTTTTACGGTGGTCCGGGCGTGATGGTACATCAAAGTCGTCAATATCACTTGTTGAGGCTGTTACTGCAGTTCGGGTGAGGGTAGAGTGTGGACTTTTCACCGAAGCATTTATACATCAAAGAATGCTGTGTACCAAAGTCAAGGAGAAGACGTTGAAGCTTGGAGAATTGGGGGATGCAACTGATGATTCAAAAAGCAAATATAGGAGTTGGGAAGACTGGGTGGAGATATTGGTCACTGAAATTTGTGTCCTCTGTATACGACGGAGCATGCTAGACCGAGTGATAGAGTTGCCTTGGAACTCTGATGAAGAGAAACATCTCCACAAGTGCCTGTTAGACTATACCATTGATTATCCTTCCTCAACTATTGGAAGCCTTCTTGTCGTATTCTACATTCAGCGGTACCGGTACTCTGAAGCTTACCAAGTTGATCAAATACTTAAAAACCTGGAGGAGGAGTTCATTTCAAAGAAGTCTGTCAGTGAAGAAGTTTTATCTCGAATGAGATCTATGAGCGGATGGAGAGCTGGATTAATCGATAAATGCATGGAGTTGCTGCCAGAAGTCCAACGACAAGAAATAAAGTCGGGAAAGTTTCCTGAGGTAGCTGTTACCACCTCTAGTGAAGTTGAAATGGCAGCAGCATCACTTCCTGAAGTGCAAAAGTCACAATCAATTAGTATGCTGATTCCTTCATCCATTGATTCTTCTCTTGGTTTATGGTCGGATTGTGTGAATCCTTCCTGGAAACCGTCAATATCTGAAACACCAAAAAAAAGAGTTGGGTTGGTTGACAGTTATCGCTCTGAACTTGGTAACAATGGTTCAATTCTTCATGAGAAGTTGCTTAGCAATTCTGAAACACAATGGAAGCCTGATGATAGCATAAACAAGGCTTTCAACTTTGAAGATGCATCAACTCCTGGAATTCATTGGGCTACTCCCCCCTCATCCGTCAAGGACAGGAAAAAGAGTTCATCAAGAGTACTTTCAAATAGCCGTCTCCAAGACAATCAATATGCTAGAATGTCACCAGAAACGGAACGGAACAAGAGGTTCAACGCATTCCAAAATTCAAGTCCTTTGAACTTTTACAGCGCTGATTCTAATCCAGTAACTACACCCAGCAGCAACCGTGGCCTGTTTAAAGATTCCGCAACAGACCTGCGTCGGAGTGTGAACAGTAAGGGGTTCCAACGAGATAGGGACAATAGAACTTGGAATATGGCTTCCAAGGATGACCCAATGGACATTTCGTTGAGCTATGGAGAAAAGAGTCATGTGATTGAGGACGGAAACTTAAACAGTGGACCGAGATGGAGGTCTGACGAAGCTAGTGACGAGGAAGAGGAGCAGAGTCCACAGAAAGCCATTGGGATCACTCATCGTGCTTCTACTGCGAGGGCATTACGAAGAACAAGATTTTCCAAGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0022414 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELYS

Protein Analysis

1047

Amino Acids

117.59

Weight (kDa)

6.19

Isoelectric Point (pI)

52.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ELYS	PF13934	406 - 681	1.6e-38	Nuclear pore complex assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39810 AT2G39810
fragaria_vesca	FvH4_5g19540 FvH4_5g19540 FvH4_5g19540 FvH4_5g19540
malus_domestica	MD04G1060900.v1.1 MD06G1054200.v1.1
prunus_persica	Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1
pyrus_communis	pycom04g05480 pycom06g04560
rosa_chinensis	RchiOBHm_Chr7g0204151
rosa_laevigata	RLG00000003484
rosa_multiflora	Rmu_sc0001311.1_g000032
rosa_roxburghii	Rroxscaffold_3G00253300
rosa_rugosa	Rorug07G0081200
rosa_samantha	Rh7AG211100 Rh7BG209700 Rh7CG223600 Rh7DG217900
rosa_wichuraiana	Rw7G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	864
Acc36I	ACCTGC	1 cut(s)	2877
Acc65I	GGTACC	2 cut(s)	1211, 2106
AccB1I	GGYRCC	2 cut(s)	1211, 2106
AccB7I	CCANNNNNTGG	1 cut(s)	542
AccBSI	CCGCTC	2 cut(s)	1694, 2220
AccI	GTMKAC	1 cut(s)	1960
AccIII	TCCGGA	1 cut(s)	1621
AciI	CCGC	8 cut(s)	4, 273, 305, 875, 1692, 2104, 2220, 2859
AclWI	GGATC	3 cut(s)	764, 1303, 3089
AcsI	RAATTY	4 cut(s)	525, 1944, 2631, 2776
AcuI	CTGAAG	5 cut(s)	150, 150, 1209, 2139, 2379
AcyI	GRCGYC	1 cut(s)	562
AfaI	GTAC	8 cut(s)	921, 1213, 1665, 1729, 1834, 2108, 2114, 2691
AfeI	AGCGCT	2 cut(s)	500, 2803
AfiI	CCNNNNNNNGG	3 cut(s)	542, 1621, 2158
AflII	CTTAAG	1 cut(s)	908
AgeI	ACCGGT	1 cut(s)	2109
AjnI	CCWGG	6 cut(s)	693, 1233, 1535, 2151, 2447, 2626
AjuI	GAANNNNNNNTTGG	4 cut(s)	238, 270, 2941, 2973
AloI	GAACNNNNNNTCC	4 cut(s)	2147, 2179, 2662, 2694
Alw21I	GWGCWC	2 cut(s)	263, 456
Alw26I	GTCTC	3 cut(s)	411, 1489, 2711
AlwI	GGATC	3 cut(s)	764, 1303, 3089
Aor13HI	TCCGGA	1 cut(s)	1621
Aor51HI	AGCGCT	2 cut(s)	500, 2803
AoxI	GGCC	5 cut(s)	70, 274, 1091, 1166, 2842
ApeKI	GCWGC	7 cut(s)	1036, 1148, 1382, 2260, 2342, 2345, 2832
ApoI	RAATTY	4 cut(s)	525, 1944, 2631, 2776
ArsI	GACNNNNNNTTYG	2 cut(s)	2767, 2799
AseI	ATTAAT	1 cut(s)	2237
AsiGI	ACCGGT	1 cut(s)	2109
Asp700I	GAANNNNTTC	1 cut(s)	1374
Asp718I	GGTACC	2 cut(s)	1211, 2106
AspLEI	GCGC	4 cut(s)	501, 548, 825, 2804
AspS9I	GGNCC	7 cut(s)	37, 242, 251, 275, 1634, 1713, 3014
AsuC2I	CCSGG	1 cut(s)	1717
AsuHPI	GGTGA	7 cut(s)	28, 193, 995, 1604, 1789, 1792, 2727
AvaII	GGWCC	6 cut(s)	37, 242, 251, 1634, 1713, 3014
AxyI	CCTNAGG	1 cut(s)	2304
BanI	GGYRCC	2 cut(s)	1211, 2106
BanII	GRGCYC	1 cut(s)	263
BarI	GAAGNNNNNNTAC	2 cut(s)	1797, 1829
BauI	CACGAG	1 cut(s)	414
BbsI	GAAGAC	2 cut(s)	1856, 1923
Bbv12I	GWGCWC	2 cut(s)	263, 456
BbvI	GCAGC	7 cut(s)	1048, 1135, 1369, 2247, 2354, 2357, 2844
BccI	CCATC	5 cut(s)	629, 1304, 1718, 2217, 3015
BceAI	ACGGC	1 cut(s)	2688
BciT130I	CCWGG	6 cut(s)	695, 1235, 1537, 2153, 2449, 2628
BciVI	GTATCC	1 cut(s)	772
BclI	TGATCA	3 cut(s)	571, 1579, 2134
BcnI	CCSGG	1 cut(s)	1717
BcoDI	GTCTC	3 cut(s)	411, 1489, 2711
BfaI	CTAG	9 cut(s)	44, 60, 581, 1292, 1505, 1976, 2325, 2727, 3039
BfmI	CTRYAG	2 cut(s)	1598, 1767
BfoI	RGCGCY	2 cut(s)	502, 2805
BfrI	CTTAAG	1 cut(s)	908
BfuAI	ACCTGC	1 cut(s)	2877
BfuI	GTATCC	1 cut(s)	772
BglII	AGATCT	2 cut(s)	1626, 2210
BisI	GCNGC	8 cut(s)	274, 1037, 1149, 1383, 2261, 2343, 2346, 2833
BlpI	GCTNAGC	2 cut(s)	987, 2552
BlsI	GCNGC	8 cut(s)	275, 1038, 1150, 1384, 2262, 2344, 2347, 2834
BmcAI	AGTACT	2 cut(s)	1665, 2691
Bme1390I	CCNGG	7 cut(s)	695, 1235, 1537, 1717, 2153, 2449, 2628
Bme18I	GGWCC	6 cut(s)	37, 242, 251, 1634, 1713, 3014
BmgT120I	GGNCC	7 cut(s)	37, 242, 251, 275, 1634, 1713, 3014
BmiI	GGNNCC	5 cut(s)	38, 879, 1213, 2108, 2897
BmrFI	CCNGG	7 cut(s)	695, 1235, 1537, 1717, 2153, 2449, 2628
BmrI	ACTGGG	1 cut(s)	1930
BmsI	GCATC	7 cut(s)	365, 1219, 1346, 1867, 2357, 2605, 2627
BmuI	ACTGGG	1 cut(s)	1930
BoxI	GACNNNNGTC	1 cut(s)	2871
BpiI	GAAGAC	2 cut(s)	1856, 1923
BpmI	CTGGAG	4 cut(s)	166, 716, 1265, 2174
Bpu1102I	GCTNAGC	2 cut(s)	987, 2552
BpuEI	CTTGAG	2 cut(s)	442, 1100
BpuMI	CCSGG	1 cut(s)	1717
Bsa29I	ATCGAT	1 cut(s)	2241
BsaBI	GATNNNNATC	1 cut(s)	2811
BsaHI	GRCGYC	1 cut(s)	562
BsaJI	CCNNGG	6 cut(s)	693, 1233, 1535, 1997, 2839, 2937
BsaWI	WCCGGW	2 cut(s)	1621, 2109
BsaXI	ACNNNNNCTCC	4 cut(s)	1838, 1868, 2147, 2177
Bsc4I	CCNNNNNNNGG	3 cut(s)	542, 1621, 2158
Bse118I	RCCGGY	1 cut(s)	2109
Bse1I	ACTGG	6 cut(s)	253, 939, 1197, 1554, 1925, 2816
Bse21I	CCTNAGG	1 cut(s)	2304
Bse3DI	GCAATG	2 cut(s)	388, 1496
Bse8I	GATNNNNATC	1 cut(s)	2811
BseAI	TCCGGA	1 cut(s)	1621
BseBI	CCWGG	6 cut(s)	695, 1235, 1537, 2153, 2449, 2628
BseCI	ATCGAT	1 cut(s)	2241
BseDI	CCNNGG	6 cut(s)	693, 1233, 1535, 1997, 2839, 2937
BseJI	GATNNNNATC	1 cut(s)	2811
BseLI	CCNNNNNNNGG	3 cut(s)	542, 1621, 2158
BseMI	GCAATG	2 cut(s)	388, 1496
BseMII	CTCAG	4 cut(s)	930, 1001, 1342, 2295
BseNI	ACTGG	6 cut(s)	253, 939, 1197, 1554, 1925, 2816
BseRI	GAGGAG	5 cut(s)	439, 656, 2171, 2174, 3068
BseXI	GCAGC	7 cut(s)	1048, 1135, 1369, 2247, 2354, 2357, 2844
BseYI	CCCAGC	2 cut(s)	277, 2828
BsgI	GTGCAG	2 cut(s)	504, 777
BshFI	GGCC	5 cut(s)	72, 276, 1093, 1168, 2844
BshNI	GGYRCC	2 cut(s)	1211, 2106
BshTI	ACCGGT	1 cut(s)	2109
BshVI	ATCGAT	1 cut(s)	2241
BsiHKAI	GWGCWC	2 cut(s)	263, 456
BsiSI	CCGG	3 cut(s)	1622, 1716, 2110
BslFI	GGGAC	2 cut(s)	498, 2924
BslI	CCNNNNNNNGG	3 cut(s)	542, 1621, 2158
BsmAI	GTCTC	3 cut(s)	411, 1489, 2711
BsmBI	CGTCTC	1 cut(s)	2711
BsmFI	GGGAC	2 cut(s)	498, 2924
BsmI	GAATGC	3 cut(s)	1120, 1830, 2768
BsnI	GGCC	5 cut(s)	72, 276, 1093, 1168, 2844
Bsp1286I	GDGCHC	2 cut(s)	263, 456
Bsp13I	TCCGGA	1 cut(s)	1621
Bsp1720I	GCTNAGC	2 cut(s)	987, 2552
BspACI	CCGC	8 cut(s)	4, 273, 305, 875, 1692, 2104, 2220, 2859
BspANI	GGCC	5 cut(s)	72, 276, 1093, 1168, 2844
BspCNI	CTCAG	4 cut(s)	929, 1000, 1341, 2296
BspDI	ATCGAT	1 cut(s)	2241
BspEI	TCCGGA	1 cut(s)	1621
BspHI	TCATGA	2 cut(s)	994, 2539
BspLI	GGNNCC	5 cut(s)	38, 879, 1213, 2108, 2897
BspMAI	CTGCAG	2 cut(s)	1602, 1771
BspMI	ACCTGC	1 cut(s)	2877
BspPI	GGATC	3 cut(s)	764, 1303, 3089
BspT107I	GGYRCC	2 cut(s)	1211, 2106
BspTI	CTTAAG	1 cut(s)	908
BsrBI	CCGCTC	2 cut(s)	1694, 2220
BsrDI	GCAATG	2 cut(s)	388, 1496
BsrFI	RCCGGY	1 cut(s)	2109
BsrI	ACTGG	6 cut(s)	253, 939, 1197, 1554, 1925, 2816
BssAI	RCCGGY	1 cut(s)	2109
BssECI	CCNNGG	6 cut(s)	693, 1233, 1535, 1997, 2839, 2937
BssNAI	GTATAC	1 cut(s)	1961
BssNI	GRCGYC	1 cut(s)	562
BssSI	CACGAG	1 cut(s)	414
BssT1I	CCWWGG	2 cut(s)	1997, 2937
Bst1107I	GTATAC	1 cut(s)	1961
Bst2BI	CACGAG	1 cut(s)	414
Bst2UI	CCWGG	6 cut(s)	695, 1235, 1537, 2153, 2449, 2628
Bst4CI	ACNGT	9 cut(s)	89, 351, 924, 1710, 2457, 2501, 2840, 2888, 3011
Bst6I	CTCTTC	3 cut(s)	1185, 2007, 3045
BstACI	GRCGYC	1 cut(s)	562
BstAFI	CTTAAG	1 cut(s)	908
BstC8I	GCNNGC	6 cut(s)	309, 497, 821, 931, 1437, 1973
BstDEI	CTNAG	8 cut(s)	706, 916, 987, 1328, 1335, 1650, 2304, 2552
BstDSI	CCRYGG	1 cut(s)	2839
BstENI	CCTNNNNNAGG	1 cut(s)	2156
BstH2I	RGCGCY	2 cut(s)	502, 2805
BstHHI	GCGC	4 cut(s)	501, 548, 825, 2804
BstMAI	GTCTC	3 cut(s)	411, 1489, 2711
BstMWI	GCNNNNNNNGC	6 cut(s)	308, 1165, 1436, 1766, 2841, 3101
BstNI	CCWGG	6 cut(s)	695, 1235, 1537, 2153, 2449, 2628
BstNSI	RCATGY	2 cut(s)	473, 1975
BstPAI	GACNNNNGTC	1 cut(s)	2871
BstSCI	CCNGG	7 cut(s)	693, 1233, 1535, 1715, 2151, 2447, 2626
BstSFI	CTRYAG	2 cut(s)	1598, 1767
BstV1I	GCAGC	7 cut(s)	1048, 1135, 1369, 2247, 2354, 2357, 2844
BstV2I	GAAGAC	2 cut(s)	1856, 1923
BstX2I	RGATCY	3 cut(s)	1295, 1626, 2210
BstYI	RGATCY	3 cut(s)	1295, 1626, 2210
BstZ17I	GTATAC	1 cut(s)	1961
Bsu15I	ATCGAT	1 cut(s)	2241
Bsu36I	CCTNAGG	1 cut(s)	2304
BsuI	GTATCC	1 cut(s)	772
BsuRI	GGCC	5 cut(s)	72, 276, 1093, 1168, 2844
BsuTUI	ATCGAT	1 cut(s)	2241
BtgI	CCRYGG	1 cut(s)	2839
BtsIMutI	CAGTG	6 cut(s)	581, 946, 1204, 1938, 2191, 3016
BveI	ACCTGC	1 cut(s)	2877
Cac8I	GCNNGC	6 cut(s)	309, 497, 821, 931, 1437, 1973
CciI	TCATGA	2 cut(s)	994, 2539
CfoI	GCGC	4 cut(s)	501, 548, 825, 2804
Cfr10I	RCCGGY	1 cut(s)	2109
Cfr13I	GGNCC	7 cut(s)	37, 242, 251, 275, 1634, 1713, 3014
ClaI	ATCGAT	1 cut(s)	2241
CseI	GACGC	2 cut(s)	570, 2861
Csp6I	GTAC	8 cut(s)	920, 1212, 1664, 1728, 1833, 2107, 2113, 2690
CspAI	ACCGGT	1 cut(s)	2109
CviAII	CATG	9 cut(s)	299, 462, 470, 995, 1070, 1972, 2251, 2540, 2984
CviQI	GTAC	8 cut(s)	920, 1212, 1664, 1728, 1833, 2107, 2113, 2690
DdeI	CTNAG	8 cut(s)	706, 916, 987, 1328, 1335, 1650, 2304, 2552
DraI	TTTAAA	1 cut(s)	2851
Eam1104I	CTCTTC	3 cut(s)	1185, 2007, 3045
EarI	CTCTTC	3 cut(s)	1185, 2007, 3045
Ecl136II	GAGCTC	1 cut(s)	261
Eco130I	CCWWGG	2 cut(s)	1997, 2937
Eco147I	AGGCCT	1 cut(s)	1093
Eco24I	GRGCYC	1 cut(s)	263
Eco47I	GGWCC	6 cut(s)	37, 242, 251, 1634, 1713, 3014
Eco47III	AGCGCT	2 cut(s)	500, 2803
Eco53kI	GAGCTC	1 cut(s)	261
Eco57I	CTGAAG	5 cut(s)	150, 150, 1209, 2139, 2379
Eco81I	CCTNAGG	1 cut(s)	2304
EcoICRI	GAGCTC	1 cut(s)	261
EcoNI	CCTNNNNNAGG	1 cut(s)	2156
EcoRI	GAATTC	2 cut(s)	525, 2631
EcoRII	CCWGG	6 cut(s)	693, 1233, 1535, 2151, 2447, 2626
EcoT14I	CCWWGG	2 cut(s)	1997, 2937
EcoT22I	ATGCAT	2 cut(s)	2252, 2620
EcoT38I	GRGCYC	1 cut(s)	263
ErhI	CCWWGG	2 cut(s)	1997, 2937
Esp3I	CGTCTC	1 cut(s)	2711
FaeI	CATG	9 cut(s)	302, 465, 473, 998, 1073, 1975, 2254, 2543, 2987
FalI	AAGNNNNNCTT	2 cut(s)	576, 608
FaqI	GGGAC	2 cut(s)	498, 2924
FatI	CATG	9 cut(s)	298, 461, 469, 994, 1069, 1971, 2250, 2539, 2983
FauNDI	CATATG	1 cut(s)	1041
FbaI	TGATCA	3 cut(s)	571, 1579, 2134
FblI	GTMKAC	1 cut(s)	1960
Fnu4HI	GCNGC	8 cut(s)	274, 1037, 1149, 1383, 2261, 2343, 2346, 2833
FriOI	GRGCYC	1 cut(s)	263
Fsp4HI	GCNGC	8 cut(s)	274, 1037, 1149, 1383, 2261, 2343, 2346, 2833
FspBI	CTAG	9 cut(s)	44, 60, 581, 1292, 1505, 1976, 2325, 2727, 3039
GlaI	GCGC	4 cut(s)	500, 547, 824, 2803
GluI	GCNGC	8 cut(s)	274, 1037, 1149, 1383, 2261, 2343, 2346, 2833
GsaI	CCCAGC	2 cut(s)	281, 2832
GsuI	CTGGAG	4 cut(s)	166, 716, 1265, 2174
HaeII	RGCGCY	2 cut(s)	502, 2805
HaeIII	GGCC	5 cut(s)	72, 276, 1093, 1168, 2844
HapII	CCGG	3 cut(s)	1622, 1716, 2110
HgaI	GACGC	2 cut(s)	570, 2861
HhaI	GCGC	4 cut(s)	501, 548, 825, 2804
Hin1I	GRCGYC	1 cut(s)	562
Hin1II	CATG	9 cut(s)	302, 465, 473, 998, 1073, 1975, 2254, 2543, 2987
Hin6I	GCGC	4 cut(s)	499, 546, 823, 2802
HinP1I	GCGC	4 cut(s)	499, 546, 823, 2802
HincII	GTYRAC	1 cut(s)	2497
HindII	GTYRAC	1 cut(s)	2497
HindIII	AAGCTT	4 cut(s)	132, 1605, 1859, 2121
HpaII	CCGG	3 cut(s)	1622, 1716, 2110
HphI	GGTGA	7 cut(s)	28, 193, 995, 1604, 1789, 1792, 2727
Hpy99I	CGWCG	4 cut(s)	93, 564, 1968, 2877
HpyCH4III	ACNGT	9 cut(s)	89, 351, 924, 1710, 2457, 2501, 2840, 2888, 3011
HpyCH4IV	ACGT	1 cut(s)	1853
HpyF10VI	GCNNNNNNNGC	6 cut(s)	308, 1165, 1436, 1766, 2841, 3101
HpyF3I	CTNAG	8 cut(s)	706, 916, 987, 1328, 1335, 1650, 2304, 2552
HpySE526I	ACGT	1 cut(s)	1853
Hsp92I	GRCGYC	1 cut(s)	562
Hsp92II	CATG	9 cut(s)	302, 465, 473, 998, 1073, 1975, 2254, 2543, 2987
HspAI	GCGC	4 cut(s)	499, 546, 823, 2802
Kpn2I	TCCGGA	1 cut(s)	1621
KpnI	GGTACC	2 cut(s)	1215, 2110
Ksp22I	TGATCA	3 cut(s)	571, 1579, 2134
LmnI	GCTCC	6 cut(s)	266, 307, 643, 1517, 1968, 3055
Lsp1109I	GCAGC	7 cut(s)	1048, 1135, 1369, 2247, 2354, 2357, 2844
LweI	GCATC	7 cut(s)	365, 1219, 1346, 1867, 2357, 2605, 2627
MaeI	CTAG	9 cut(s)	44, 60, 581, 1292, 1505, 1976, 2325, 2727, 3039
MaeII	ACGT	1 cut(s)	1853
MbiI	CCGCTC	2 cut(s)	1694, 2220
MflI	RGATCY	3 cut(s)	1295, 1626, 2210
MhlI	GDGCHC	2 cut(s)	263, 456
MlyI	GAGTC	3 cut(s)	1202, 2989, 3070
MmeI	TCCRAC	7 cut(s)	64, 688, 771, 2296, 2409, 2855, 2923
Mph1103I	ATGCAT	2 cut(s)	2252, 2620
MroI	TCCGGA	1 cut(s)	1621
MroXI	GAANNNNTTC	1 cut(s)	1374
MspA1I	CMGCKG	1 cut(s)	2104
MspCI	CTTAAG	1 cut(s)	908
MspI	CCGG	3 cut(s)	1622, 1716, 2110
MspR9I	CCNGG	7 cut(s)	695, 1235, 1537, 1717, 2153, 2449, 2628
Mva1269I	GAATGC	3 cut(s)	1120, 1830, 2768
MvaI	CCWGG	6 cut(s)	695, 1235, 1537, 2153, 2449, 2628
MwoI	GCNNNNNNNGC	6 cut(s)	308, 1165, 1436, 1766, 2841, 3101
NciI	CCSGG	1 cut(s)	1717
NdeI	CATATG	1 cut(s)	1041
NlaIII	CATG	9 cut(s)	302, 465, 473, 998, 1073, 1975, 2254, 2543, 2987
NlaIV	GGNNCC	5 cut(s)	38, 879, 1213, 2108, 2897
NmuCI	GTSAC	5 cut(s)	1610, 1936, 2370, 2733, 3041
NsiI	ATGCAT	2 cut(s)	2252, 2620
NspI	RCATGY	2 cut(s)	473, 1975
PaeI	GCATGC	1 cut(s)	1975
PagI	TCATGA	2 cut(s)	994, 2539
PceI	AGGCCT	1 cut(s)	1093
PcsI	WCGNNNNNNNCGW	1 cut(s)	412
PctI	GAATGC	3 cut(s)	1120, 1830, 2768
PdmI	GAANNNNTTC	1 cut(s)	1374
PflMI	CCANNNNNTGG	1 cut(s)	542
PfoI	TCCNGGA	2 cut(s)	2447, 2626
PinAI	ACCGGT	1 cut(s)	2109
PkrI	GCNGC	8 cut(s)	275, 1038, 1150, 1384, 2262, 2344, 2347, 2834
PleI	GAGTC	3 cut(s)	1201, 2988, 3069
PpsI	GAGTC	3 cut(s)	1201, 2988, 3069
PshAI	GACNNNNGTC	1 cut(s)	2871
PshBI	ATTAAT	1 cut(s)	2237
PsiI	TTATAA	1 cut(s)	864
Psp124BI	GAGCTC	1 cut(s)	263
Psp6I	CCWGG	6 cut(s)	693, 1233, 1535, 2151, 2447, 2626
PspFI	CCCAGC	2 cut(s)	277, 2828
PspGI	CCWGG	6 cut(s)	693, 1233, 1535, 2151, 2447, 2626
PspN4I	GGNNCC	5 cut(s)	38, 879, 1213, 2108, 2897
PspPI	GGNCC	7 cut(s)	37, 242, 251, 275, 1634, 1713, 3014
PsrI	GAACNNNNNNTAC	2 cut(s)	2512, 2544
PstI	CTGCAG	2 cut(s)	1602, 1771
PsuI	RGATCY	3 cut(s)	1295, 1626, 2210
RsaI	GTAC	8 cut(s)	921, 1213, 1665, 1729, 1834, 2108, 2114, 2691
RsaNI	GTAC	8 cut(s)	920, 1212, 1664, 1728, 1833, 2107, 2113, 2690
SacI	GAGCTC	1 cut(s)	263
SatI	GCNGC	8 cut(s)	274, 1037, 1149, 1383, 2261, 2343, 2346, 2833
Sau96I	GGNCC	7 cut(s)	37, 242, 251, 275, 1634, 1713, 3014
ScaI	AGTACT	2 cut(s)	1665, 2691
SchI	GAGTC	3 cut(s)	1202, 2989, 3070
ScrFI	CCNGG	7 cut(s)	695, 1235, 1537, 1717, 2153, 2449, 2628
SduI	GDGCHC	2 cut(s)	263, 456
SfaNI	GCATC	7 cut(s)	365, 1219, 1346, 1867, 2357, 2605, 2627
SfcI	CTRYAG	2 cut(s)	1598, 1767
SinI	GGWCC	6 cut(s)	37, 242, 251, 1634, 1713, 3014
SmlI	CTYRAG	3 cut(s)	421, 908, 1079
SmoI	CTYRAG	3 cut(s)	421, 908, 1079
SphI	GCATGC	1 cut(s)	1975
SseBI	AGGCCT	1 cut(s)	1093
SsiI	CCGC	8 cut(s)	4, 273, 305, 875, 1692, 2104, 2220, 2859
SspMI	CTAG	9 cut(s)	44, 60, 581, 1292, 1505, 1976, 2325, 2727, 3039
SstI	GAGCTC	1 cut(s)	263
StuI	AGGCCT	1 cut(s)	1093
StyD4I	CCNGG	7 cut(s)	693, 1233, 1535, 1715, 2151, 2447, 2626
StyI	CCWWGG	2 cut(s)	1997, 2937
TaaI	ACNGT	9 cut(s)	89, 351, 924, 1710, 2457, 2501, 2840, 2888, 3011
TaiI	ACGT	1 cut(s)	1856
TaqI	TCGA	5 cut(s)	257, 325, 1378, 2203, 2241
TaqII	GACCGA	2 cut(s)	1995, 3031
TatI	WGTACW	3 cut(s)	919, 1663, 2689
TauI	GCSGC	1 cut(s)	276
TscAI	CASTG	6 cut(s)	581, 946, 1204, 1945, 2191, 3016
TseFI	GTSAC	5 cut(s)	1610, 1936, 2370, 2733, 3041
TseI	GCWGC	7 cut(s)	1036, 1148, 1382, 2260, 2342, 2345, 2832
Tsp45I	GTSAC	5 cut(s)	1610, 1936, 2370, 2733, 3041
TspGWI	ACGGA	7 cut(s)	253, 1121, 1981, 2647, 2759, 2764, 3012
TspRI	CASTG	6 cut(s)	581, 946, 1204, 1945, 2191, 3016
Van91I	CCANNNNNTGG	1 cut(s)	542
Vha464I	CTTAAG	1 cut(s)	908
VpaK11BI	GGWCC	6 cut(s)	37, 242, 251, 1634, 1713, 3014
VspI	ATTAAT	1 cut(s)	2237
XagI	CCTNNNNNAGG	1 cut(s)	2156
XapI	RAATTY	4 cut(s)	525, 1944, 2631, 2776
XbaI	TCTAGA	2 cut(s)	580, 1504
XceI	RCATGY	2 cut(s)	473, 1975
XmiI	GTMKAC	1 cut(s)	1960
XmnI	GAANNNNTTC	1 cut(s)	1374
XspI	CTAG	9 cut(s)	44, 60, 581, 1292, 1505, 1976, 2325, 2727, 3039
ZrmI	AGTACT	2 cut(s)	1665, 2691
Zsp2I	ATGCAT	2 cut(s)	2252, 2620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.