pycom04g09880

IQ-DOMAIN 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
12625598 .. 12627990
2393 bp
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UTR
Exon/CDS
Intron
pycom04g09880.2

Sequence Viewer

Length: 1449 bp
ATGGGGAAGAAAGGTTGGTTTTCTTCAGTAAAGAAAGCTCTGAGCCCTGATTCTAAGAAGAAAGAGGAGCGATCAGATAAATCAAAAAAGAAATGGTTTGGGAAACAAAAGTACCCGGAGTTTGAATCTACTTCTTATCAACCGTCCATTATATTGCCACCTCTTCCACCACGAGAACAGGTGAAATTAACCAATGTGGAGAATGAGCAGAACAATGATGCTTACTCTGTTCCAGTCACCACCACAGTCACCCCTACCGCAGTGGCTGAGGCTGCAGTTTCCGTGGCTCCTCCTCCGACTCAAGCTGTTGCAGAGGTTGTAAGACTCCCTACAACCACTCAGTATGCTGGAAAATCAAGGGAGGAAGTGGCAGCAATCAAGATTCAAACAGCATTTCGAGGATACCTGGCAAGAAGGGCGTTGAGGGCGTTAAGAGGGCTTGTTAGGCTGAAATCATTGATAGAGGGATCTGTTGTGAAACGGCAAGCCACAAATACCCTCCGATGCATGCAGACTCTATCTCGTGTGCAGTCTCAGATACGTTCCAGGAGGATTAGGATGTTAGAAGAGAATCAGGCTCTGCAAAGGCAACTCCTACTAAAACATGCAAAAGAGCTTGAGACTTTGCGGCTTGGGGATGAATGGGATGATAGCATACAGTCAAAGGAGCAAGTTGAAGCAAACCTATTAAGCAAACACGAGGCAGCAATGAGAAGGGAAAGAGCACTCGCTTATGCATTCTCTCATCAGAAAAATGGGAAGAATACTACAAAATCTGTAAACCCAATGTTCATGGATCAAAGCAATCCCACATGGGGTTGGAGCTGGTTGGAAAGGTGGATGGCTGCCCGGCCTTGGGAGAGTCGTGGCATGACAGATAAAGACATGCAGGATGAGCATGCATCTGTAAAGAGTGCAAGTCGCGGCATTTCTGCTGGAGAAATTAACAAGTCCTATGCCCGCTACCTCCTCAATTCCGACAAGCAATCCCCAACAGCCAGTGAAAAGCCAAGCCATCCTGGATTTCGGTCCCCTTCAACTCCTTCTAGGCCAGCTTCGAAAGTAGCTCGAAAATTAAAGCCAGCAGCAAGCCCAAGGGGTAGTAGGGTCCCGGATGATGACACGAAAAGCATGGTCAGTGTGCAATCAACTCAGTTTAGGAGGCACAGCATTGCTGGCTCCTCTGTGAGGGATGACGAAAGCCTAGATAGTTCTCCAGCAGTTCCAAGTTACATGGTACCAACTAAATCCGCAAGAGCCAAGTCCAGGCTGCAGAGCCCAGCAGAGAAGAATGGGATCACTGAGAAGGACTTGCCGCCTGAGTCAGCTAAGAAACGGCTGTCATTTCCAGCCTCCCCCGCTCAACCAAGGCGGCATTCTGGTCCACCAAGGGTTGACAGCAGTATAATTACAGCAAACAAAGTGACTGATATTGGAGTCGAAAGCTAA

Protein Analysis

483

Amino Acids

53.68

Weight (kDa)

10.12

Isoelectric Point (pI)

60.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1237
AccB1I GGYRCC 1 cut(s) 1237
AccBSI CCGCTC 1 cut(s) 1361
AccII CGCG 1 cut(s) 924
AciI CCGC 8 cut(s) 258, 628, 924, 961, 1251, 1316, 1359, 1372
AclWI GGATC 3 cut(s) 475, 804, 1304
AcuI CTGAAG 1 cut(s) 9
AfaI GTAC 2 cut(s) 113, 1239
AfiI CCNNNNNNNGG 5 cut(s) 815, 855, 856, 1188, 1266
AgsI TTSAA 4 cut(s) 125, 386, 677, 1038
AjnI CCWGG 4 cut(s) 405, 545, 1018, 1265
AjuI GAANNNNNNNTTGG 2 cut(s) 1360, 1392
AluBI AGCT 8 cut(s) 38, 305, 616, 825, 1055, 1067, 1328, 1446
AluI AGCT 8 cut(s) 38, 305, 616, 825, 1055, 1067, 1328, 1446
Alw21I GWGCWC 1 cut(s) 727
Alw26I GTCTC 2 cut(s) 537, 614
AlwI GGATC 3 cut(s) 475, 804, 1304
AlwNI CAGNNNCTG 2 cut(s) 266, 580
AoxI GGCC 2 cut(s) 851, 1049
ApeKI GCWGC 6 cut(s) 272, 371, 704, 845, 1085, 1270
Asp718I GGTACC 1 cut(s) 1237
AspS9I GGNCC 3 cut(s) 1029, 1108, 1382
AsuC2I CCSGG 3 cut(s) 116, 850, 1112
AsuHPI GGTGA 3 cut(s) 193, 229, 241
AsuII TTCGAA 1 cut(s) 1058
AvaII GGWCC 3 cut(s) 1029, 1108, 1382
BaeI ACNNNNGTAYC 2 cut(s) 95, 128
BanI GGYRCC 1 cut(s) 1237
BanII GRGCYC 2 cut(s) 47, 1280
BauI CACGAG 3 cut(s) 171, 522, 698
Bbv12I GWGCWC 1 cut(s) 727
BbvCI CCTCAGC 1 cut(s) 267
BbvI GCAGC 6 cut(s) 259, 383, 716, 832, 1097, 1257
BccI CCATC 2 cut(s) 835, 1023
BceAI ACGGC 2 cut(s) 497, 1352
BciT130I CCWGG 4 cut(s) 407, 547, 1020, 1267
BciVI GTATCC 1 cut(s) 395
BcnI CCSGG 3 cut(s) 116, 850, 1112
BcoDI GTCTC 2 cut(s) 537, 614
BfaI CTAG 2 cut(s) 1047, 1205
BfmI CTRYAG 2 cut(s) 273, 1271
BfuI GTATCC 1 cut(s) 395
Bme1390I CCNGG 7 cut(s) 116, 407, 547, 850, 1020, 1112, 1267
Bme18I GGWCC 3 cut(s) 1029, 1108, 1382
BmgT120I GGNCC 3 cut(s) 1029, 1108, 1382
BmiI GGNNCC 6 cut(s) 288, 1031, 1109, 1110, 1180, 1239
BmrFI CCNGG 7 cut(s) 116, 407, 547, 850, 1020, 1112, 1267
BmsI GCATC 3 cut(s) 208, 494, 911
BpmI CTGGAG 2 cut(s) 957, 1200
Bpu10I CCTNAGC 1 cut(s) 267
Bpu14I TTCGAA 1 cut(s) 1058
BpuEI CTTGAG 2 cut(s) 285, 638
BpuMI CCSGG 3 cut(s) 116, 850, 1112
BsaJI CCNNGG 5 cut(s) 282, 854, 1094, 1367, 1388
Bsc4I CCNNNNNNNGG 5 cut(s) 815, 855, 856, 1188, 1266
Bse1I ACTGG 2 cut(s) 233, 999
Bse3DI GCAATG 2 cut(s) 714, 1170
BseBI CCWGG 4 cut(s) 407, 547, 1020, 1267
BseDI CCNNGG 5 cut(s) 282, 854, 1094, 1367, 1388
BseGI GGATG 8 cut(s) 564, 643, 652, 846, 898, 1015, 1120, 1198
BseLI CCNNNNNNNGG 5 cut(s) 815, 855, 856, 1188, 1266
BseMI GCAATG 2 cut(s) 714, 1170
BseMII CTCAG 7 cut(s) 32, 258, 353, 548, 1166, 1293, 1311
BseNI ACTGG 2 cut(s) 233, 999
BseRI GAGGAG 5 cut(s) 80, 279, 282, 959, 1171
BseXI GCAGC 6 cut(s) 259, 383, 716, 832, 1097, 1257
BseYI CCCAGC 1 cut(s) 1279
BsgI GTGCAG 1 cut(s) 548
Bsh1236I CGCG 1 cut(s) 924
BshFI GGCC 2 cut(s) 853, 1051
BshNI GGYRCC 1 cut(s) 1237
BsiHKAI GWGCWC 1 cut(s) 727
BsiSI CCGG 3 cut(s) 116, 850, 1112
BslFI GGGAC 2 cut(s) 1015, 1094
BslI CCNNNNNNNGG 5 cut(s) 815, 855, 856, 1188, 1266
BsmAI GTCTC 2 cut(s) 537, 614
BsmFI GGGAC 2 cut(s) 1015, 1094
BsmI GAATGC 2 cut(s) 737, 1375
BsnI GGCC 2 cut(s) 853, 1051
Bsp119I TTCGAA 1 cut(s) 1058
Bsp1286I GDGCHC 3 cut(s) 47, 727, 1280
Bsp143I GATC 4 cut(s) 71, 467, 796, 1296
BspACI CCGC 8 cut(s) 258, 628, 924, 961, 1251, 1316, 1359, 1372
BspANI GGCC 2 cut(s) 853, 1051
BspCNI CTCAG 7 cut(s) 33, 259, 352, 547, 1165, 1294, 1312
BspFNI CGCG 1 cut(s) 924
BspLI GGNNCC 6 cut(s) 288, 1031, 1109, 1110, 1180, 1239
BspMAI CTGCAG 2 cut(s) 277, 1275
BspPI GGATC 3 cut(s) 475, 804, 1304
BspT104I TTCGAA 1 cut(s) 1058
BspT107I GGYRCC 1 cut(s) 1237
BsrBI CCGCTC 1 cut(s) 1361
BsrDI GCAATG 2 cut(s) 714, 1170
BsrI ACTGG 2 cut(s) 233, 999
BssECI CCNNGG 5 cut(s) 282, 854, 1094, 1367, 1388
BssMI GATC 4 cut(s) 71, 467, 796, 1296
BssSI CACGAG 3 cut(s) 171, 522, 698
BssT1I CCWWGG 4 cut(s) 854, 1094, 1367, 1388
Bst2BI CACGAG 3 cut(s) 171, 522, 698
Bst2UI CCWGG 4 cut(s) 407, 547, 1020, 1267
Bst4CI ACNGT 3 cut(s) 144, 247, 660
Bst6I CTCTTC 2 cut(s) 168, 561
BstBI TTCGAA 1 cut(s) 1058
BstC8I GCNNGC 8 cut(s) 486, 509, 900, 961, 1053, 1083, 1090, 1177
BstDEI CTNAG 9 cut(s) 41, 54, 267, 339, 534, 1152, 1302, 1320, 1329
BstDSI CCRYGG 1 cut(s) 282
BstENI CCTNNNNNAGG 1 cut(s) 1186
BstF5I GGATG 8 cut(s) 564, 643, 652, 846, 898, 1015, 1120, 1198
BstFNI CGCG 1 cut(s) 924
BstKTI GATC 4 cut(s) 74, 470, 799, 1299
BstMAI GTCTC 2 cut(s) 537, 614
BstMBI GATC 4 cut(s) 71, 467, 796, 1296
BstMWI GCNNNNNNNGC 7 cut(s) 272, 416, 425, 445, 895, 1176, 1358
BstNI CCWGG 4 cut(s) 407, 547, 1020, 1267
BstNSI RCATGY 4 cut(s) 511, 608, 889, 902
BstSCI CCNGG 7 cut(s) 114, 405, 545, 848, 1018, 1110, 1265
BstSFI CTRYAG 2 cut(s) 273, 1271
BstUI CGCG 1 cut(s) 924
BstV1I GCAGC 6 cut(s) 259, 383, 716, 832, 1097, 1257
BstX2I RGATCY 1 cut(s) 467
BstYI RGATCY 1 cut(s) 467
BsuI GTATCC 1 cut(s) 395
BsuRI GGCC 2 cut(s) 853, 1051
BtgI CCRYGG 1 cut(s) 282
BtsCI GGATG 8 cut(s) 564, 643, 652, 846, 898, 1015, 1120, 1198
BtsI GCAGTG 1 cut(s) 267
BtsIMutI CAGTG 4 cut(s) 267, 1006, 1144, 1299
Cac8I GCNNGC 8 cut(s) 486, 509, 900, 961, 1053, 1083, 1090, 1177
CaiI CAGNNNCTG 2 cut(s) 266, 580
Cfr13I GGNCC 3 cut(s) 1029, 1108, 1382
Csp6I GTAC 2 cut(s) 112, 1238
CviAII CATG 9 cut(s) 508, 605, 793, 813, 871, 886, 899, 1132, 1234
CviQI GTAC 2 cut(s) 112, 1238
DdeI CTNAG 9 cut(s) 41, 54, 267, 339, 534, 1152, 1302, 1320, 1329
DpnI GATC 4 cut(s) 73, 469, 798, 1298
DpnII GATC 4 cut(s) 71, 467, 796, 1296
Eam1104I CTCTTC 2 cut(s) 168, 561
EarI CTCTTC 2 cut(s) 168, 561
Eco130I CCWWGG 4 cut(s) 854, 1094, 1367, 1388
Eco24I GRGCYC 2 cut(s) 47, 1280
Eco47I GGWCC 3 cut(s) 1029, 1108, 1382
Eco57I CTGAAG 1 cut(s) 9
EcoNI CCTNNNNNAGG 1 cut(s) 1186
EcoO109I RGGNCCY 1 cut(s) 1108
EcoRII CCWGG 4 cut(s) 405, 545, 1018, 1265
EcoT14I CCWWGG 4 cut(s) 854, 1094, 1367, 1388
EcoT22I ATGCAT 3 cut(s) 509, 739, 904
EcoT38I GRGCYC 2 cut(s) 47, 1280
ErhI CCWWGG 4 cut(s) 854, 1094, 1367, 1388
FaeI CATG 9 cut(s) 511, 608, 796, 816, 874, 889, 902, 1135, 1237
FaqI GGGAC 2 cut(s) 1015, 1094
FatI CATG 9 cut(s) 507, 604, 792, 812, 870, 885, 898, 1131, 1233
FauI CCCGC 2 cut(s) 968, 1366
FokI GGATG 8 cut(s) 571, 650, 659, 853, 905, 1002, 1127, 1205
FriOI GRGCYC 2 cut(s) 47, 1280
FspBI CTAG 2 cut(s) 1047, 1205
GsaI CCCAGC 1 cut(s) 1283
GsuI CTGGAG 2 cut(s) 957, 1200
HaeIII GGCC 2 cut(s) 853, 1051
HapII CCGG 3 cut(s) 116, 850, 1112
Hin1II CATG 9 cut(s) 511, 608, 796, 816, 874, 889, 902, 1135, 1237
HincII GTYRAC 1 cut(s) 1396
HindII GTYRAC 1 cut(s) 1396
HpaII CCGG 3 cut(s) 116, 850, 1112
HphI GGTGA 3 cut(s) 193, 229, 241
Hpy166II GTNNAC 3 cut(s) 781, 1385, 1396
Hpy188I TCNGA 7 cut(s) 42, 76, 297, 503, 537, 750, 979
Hpy188III TCNNGA 1 cut(s) 379
Hpy8I GTNNAC 3 cut(s) 781, 1385, 1396
HpyAV CCTTC 5 cut(s) 408, 708, 1044, 1053, 1300
HpyCH4III ACNGT 3 cut(s) 144, 247, 660
HpyCH4IV ACGT 1 cut(s) 541
HpyF10VI GCNNNNNNNGC 7 cut(s) 272, 416, 425, 445, 895, 1176, 1358
HpyF3I CTNAG 9 cut(s) 41, 54, 267, 339, 534, 1152, 1302, 1320, 1329
HpySE526I ACGT 1 cut(s) 541
Hsp92II CATG 9 cut(s) 511, 608, 796, 816, 874, 889, 902, 1135, 1237
KflI GGGWCCC 1 cut(s) 1108
KpnI GGTACC 1 cut(s) 1241
Kzo9I GATC 4 cut(s) 71, 467, 796, 1296
LmnI GCTCC 5 cut(s) 67, 292, 667, 822, 1184
Lsp1109I GCAGC 6 cut(s) 259, 383, 716, 832, 1097, 1257
LweI GCATC 3 cut(s) 208, 494, 911
MaeI CTAG 2 cut(s) 1047, 1205
MaeII ACGT 1 cut(s) 541
MaeIII GTNAC 4 cut(s) 235, 247, 1229, 1423
MalI GATC 4 cut(s) 73, 469, 798, 1298
MbiI CCGCTC 1 cut(s) 1361
MboI GATC 4 cut(s) 71, 467, 796, 1296
MboII GAAGA 7 cut(s) 15, 19, 70, 155, 578, 772, 1300
MflI RGATCY 1 cut(s) 467
MhlI GDGCHC 3 cut(s) 47, 727, 1280
MluCI AATT 5 cut(s) 185, 942, 973, 1073, 1407
MlyI GAGTC 6 cut(s) 292, 318, 508, 871, 1331, 1446
MmeI TCCRAC 4 cut(s) 320, 800, 810, 1002
Mph1103I ATGCAT 3 cut(s) 509, 739, 904
MseI TTAA 5 cut(s) 188, 431, 689, 945, 1076
MspI CCGG 3 cut(s) 116, 850, 1112
MspR9I CCNGG 7 cut(s) 116, 407, 547, 850, 1020, 1112, 1267
Mva1269I GAATGC 2 cut(s) 737, 1375
MvaI CCWGG 4 cut(s) 407, 547, 1020, 1267
MvnI CGCG 1 cut(s) 924
MwoI GCNNNNNNNGC 7 cut(s) 272, 416, 425, 445, 895, 1176, 1358
NciI CCSGG 3 cut(s) 116, 850, 1112
NdeII GATC 4 cut(s) 71, 467, 796, 1296
NlaIII CATG 9 cut(s) 511, 608, 796, 816, 874, 889, 902, 1135, 1237
NlaIV GGNNCC 6 cut(s) 288, 1031, 1109, 1110, 1180, 1239
NmuCI GTSAC 3 cut(s) 235, 247, 1423
NsiI ATGCAT 3 cut(s) 509, 739, 904
NspI RCATGY 4 cut(s) 511, 608, 889, 902
NspV TTCGAA 1 cut(s) 1058
PaeI GCATGC 2 cut(s) 511, 902
PctI GAATGC 2 cut(s) 737, 1375
PfeI GAWTC 4 cut(s) 50, 125, 382, 571
PfoI TCCNGGA 3 cut(s) 545, 1018, 1110
PleI GAGTC 6 cut(s) 292, 318, 508, 870, 1330, 1445
PpsI GAGTC 6 cut(s) 292, 318, 508, 870, 1330, 1445
PpuMI RGGWCCY 1 cut(s) 1108
Psp5II RGGWCCY 1 cut(s) 1108
Psp6I CCWGG 4 cut(s) 405, 545, 1018, 1265
PspFI CCCAGC 1 cut(s) 1279
PspGI CCWGG 4 cut(s) 405, 545, 1018, 1265
PspN4I GGNNCC 6 cut(s) 288, 1031, 1109, 1110, 1180, 1239
PspPI GGNCC 3 cut(s) 1029, 1108, 1382
PspPPI RGGWCCY 1 cut(s) 1108
PstI CTGCAG 2 cut(s) 277, 1275
PstNI CAGNNNCTG 2 cut(s) 266, 580
PsuI RGATCY 1 cut(s) 467
RsaI GTAC 2 cut(s) 113, 1239
RsaNI GTAC 1 cut(s) 112
SaqAI TTAA 5 cut(s) 188, 431, 689, 945, 1076
Sau3AI GATC 4 cut(s) 71, 467, 796, 1296
Sau96I GGNCC 3 cut(s) 1029, 1108, 1382
SchI GAGTC 6 cut(s) 292, 318, 508, 871, 1331, 1446
ScrFI CCNGG 7 cut(s) 116, 407, 547, 850, 1020, 1112, 1267
SduI GDGCHC 3 cut(s) 47, 727, 1280
SfaNI GCATC 3 cut(s) 208, 494, 911
SfcI CTRYAG 2 cut(s) 273, 1271
SfuI TTCGAA 1 cut(s) 1058
SinI GGWCC 3 cut(s) 1029, 1108, 1382
SmlI CTYRAG 2 cut(s) 300, 617
SmoI CTYRAG 2 cut(s) 300, 617
SphI GCATGC 2 cut(s) 511, 902
Sse9I AATT 5 cut(s) 185, 942, 973, 1073, 1407
SsiI CCGC 8 cut(s) 258, 628, 924, 961, 1251, 1316, 1359, 1372
SspMI CTAG 2 cut(s) 1047, 1205
StyD4I CCNGG 7 cut(s) 114, 405, 545, 848, 1018, 1110, 1265
StyI CCWWGG 4 cut(s) 854, 1094, 1367, 1388
TaaI ACNGT 3 cut(s) 144, 247, 660
TaiI ACGT 1 cut(s) 544
TaqI TCGA 4 cut(s) 397, 1058, 1069, 1440
TaqII GACCGA 1 cut(s) 1017
TasI AATT 5 cut(s) 185, 942, 973, 1073, 1407
TauI GCSGC 4 cut(s) 631, 927, 1318, 1375
TfiI GAWTC 4 cut(s) 50, 125, 382, 571
Tru1I TTAA 5 cut(s) 188, 431, 689, 945, 1076
Tru9I TTAA 5 cut(s) 188, 431, 689, 945, 1076
TscAI CASTG 4 cut(s) 267, 1006, 1144, 1306
TseFI GTSAC 3 cut(s) 235, 247, 1423
TseI GCWGC 6 cut(s) 272, 371, 704, 845, 1085, 1270
Tsp45I GTSAC 3 cut(s) 235, 247, 1423
TspDTI ATGAA 2 cut(s) 654, 781
TspGWI ACGGA 1 cut(s) 271
TspRI CASTG 4 cut(s) 267, 1006, 1144, 1306
VpaK11BI GGWCC 3 cut(s) 1029, 1108, 1382
XagI CCTNNNNNAGG 1 cut(s) 1186
XceI RCATGY 4 cut(s) 511, 608, 889, 902
XspI CTAG 2 cut(s) 1047, 1205
Zsp2I ATGCAT 3 cut(s) 509, 739, 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.