pycom04g12900

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
15912431 .. 15916871
4441 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g12900.7

Sequence Viewer

Length: 1476 bp
ATGGGAGCCCGCTGCTCCAGATTCTCCCTCTGCTGGTTCCACTCCCACCTTAAACCCACCGTCCTCGAATCCTCCGAACTGGACAATGGGAGCAAAAGCGACAAAAGCATATGGCCGACCTTCACGGAGTACAGCCTCGACCAAATGAAAGCCGCCACGTCTGGCTTTGCCTCCGACAACATAGTCTCCGAGCACGGCGAAAAAGCTCCCAACGTTGTCTACAAGGGAAAGCTCGACAACGGCCTGTTAATCGCCGTCAAGCGATTCAACAAGCTCGCCTGGCCCGACAATCGCCAATTCCTCGAGGAGGCGAGGTCGGTGGGGAGCCTGAGGAGCGAGAGGCTGGCGAATCTGATCGGATGCTGTTGCGAAGGGGAGGAGCGGCTGCTGGTGGCGGAGTTCATGGCGCACGAGACGCTGGCAAAGCACCTGTTCCACTGGGAGAGCCAGCCGATGAGGTGGGCTATGAGGCTGAGGGTGGCGCTGTATCTGGCTCAAGCTCTCGATTACTGCAGTGGTAAAGGTCGTGCCTTGTATCATGATCTCAATGCCTACAGGGTTTTGTTTGATCAGGATGGTAATCCCAGGCTGTCATGTTTTGGCCTCATGAAGAATAGAAGGGATGGCAAGAGGTACAGTACAAACTTGGCTTTCACTCCTCCTGAGTATCTCAGGACAGGTAGGGTGACGCAAGAAAGTGTAATTTACAGCTTCGGAACATTGTTGCTTGATCTTCTAAGTGGCAAACATATTCCCCCCAGCCATGCGCTAGATCTAATTCGCGGCAGGAATTTCCTGATGCTAATGGATTCTGCTTTGGAGGGTAATTTCTCAAATGATGACGGAACTGAGTTAGTACGCTTAGCTTCTCGTTGTCTGCAATATGAAGCTCGTGAGCGGCCAAATGCAAAGTCCCTCGTCACTGCTCTCATGTCACTTCAGAAAGAAACAGAGGTTGCATCACATGTTTTGATGGGTATTGCACATGAAAGCGCATCCTCAACGCAGCCATTGGCATTAACACCCTTTGGAGAAGCTTGTTTGAGAAAGGATCTCACTGCCATACATGAAATATTGGAAAAGAATGGATACAAGGATGATGTGGGGATTGCTAATGAGCTTTCATTCCAGCTGTGGACTAATCAAATGCAGGAGACTTTGAATTCTAAGAAGAGTGGAGATTCTGCTTTTCGAGCTAAAGATTTTACAACTGCGATTGATTCCTATACACAATTCATCGACGGCGGGACCATGGTATCACCCACGGTGTATGCTCGGCGCTGCCTCTCTTACCTGATAAGTGAAATGGCACAAGAAGCTCTGGGGGATGCTATGCAAGCCCAGGTAGTTTCTCCCGAGTGGCCGACAGCTTTGTACCTTCAAGCAGCTTGCCTCTTCATCCTTGGCATGGATAATGATGCACAAGAAACACTCAAAGATGGCACAAATTTGGAAGCCAAAAAGAACAAAACCTGA

Protein Analysis

492

Amino Acids

54.97

Weight (kDa)

6.21

Isoelectric Point (pI)

35.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 182
AbsI CCTCGAGG 1 cut(s) 302
AccBSI CCGCTC 2 cut(s) 382, 898
AccI GTMKAC 1 cut(s) 219
AccII CGCG 1 cut(s) 783
AciI CCGC 7 cut(s) 10, 153, 382, 395, 783, 898, 1245
AclI AACGTT 1 cut(s) 213
AclWI GGATC 1 cut(s) 1059
AcoI YGGCCR 3 cut(s) 113, 899, 1361
AcsI RAATTY 3 cut(s) 790, 1162, 1447
AcuI CTGAAG 1 cut(s) 923
AfaI GTAC 5 cut(s) 131, 635, 640, 858, 1376
AfiI CCNNNNNNNGG 3 cut(s) 33, 307, 1408
AflIII ACRYGT 1 cut(s) 964
AgsI TTSAA 3 cut(s) 268, 1162, 1382
AjiI CACGTC 1 cut(s) 159
AjnI CCWGG 3 cut(s) 278, 584, 1341
Alw21I GWGCWC 1 cut(s) 195
Alw26I GTCTC 3 cut(s) 190, 407, 1148
AlwI GGATC 1 cut(s) 1059
Ama87I CYCGRG 2 cut(s) 302, 1355
AoxI GGCC 6 cut(s) 113, 241, 281, 601, 899, 1361
ApeKI GCWGC 5 cut(s) 12, 385, 1006, 1281, 1385
ApoI RAATTY 3 cut(s) 790, 1162, 1447
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
AspLEI GCGC 5 cut(s) 409, 484, 769, 995, 1281
AspS9I GGNCC 2 cut(s) 282, 1248
AsuHPI GGTGA 2 cut(s) 697, 1251
AvaI CYCGRG 2 cut(s) 302, 1355
AvaII GGWCC 1 cut(s) 1248
AxyI CCTNAGG 1 cut(s) 329
BaeI ACNNNNGTAYC 2 cut(s) 1239, 1272
BanII GRGCYC 1 cut(s) 10
BauI CACGAG 2 cut(s) 410, 891
Bbv12I GWGCWC 1 cut(s) 195
BbvCI CCTCAGC 1 cut(s) 473
BbvI GCAGC 4 cut(s) 372, 1018, 1268, 1397
BccI CCATC 4 cut(s) 569, 617, 967, 1433
BceAI ACGGC 4 cut(s) 211, 239, 256, 1258
BciT130I CCWGG 3 cut(s) 280, 586, 1343
BciVI GTATCC 1 cut(s) 1082
BclI TGATCA 1 cut(s) 568
BcoDI GTCTC 3 cut(s) 190, 407, 1148
BfaI CTAG 1 cut(s) 770
BfmI CTRYAG 2 cut(s) 511, 553
BfoI RGCGCY 2 cut(s) 485, 1282
BfuI GTATCC 1 cut(s) 1082
BglII AGATCT 1 cut(s) 772
BisI GCNGC 9 cut(s) 13, 153, 383, 386, 784, 899, 1007, 1282, 1386
BlpI GCTNAGC 1 cut(s) 862
BlsI GCNGC 9 cut(s) 14, 154, 384, 387, 785, 900, 1008, 1283, 1387
Bme1390I CCNGG 3 cut(s) 280, 586, 1343
Bme18I GGWCC 1 cut(s) 1248
BmeT110I CYCGRG 2 cut(s) 302, 1355
BmgBI CACGTC 1 cut(s) 159
BmgT120I GGNCC 2 cut(s) 282, 1248
BmiI GGNNCC 4 cut(s) 7, 38, 326, 1249
BmrFI CCNGG 3 cut(s) 280, 586, 1343
BmrI ACTGGG 1 cut(s) 448
BmsI GCATC 6 cut(s) 350, 789, 968, 1004, 1318, 1408
BmuI ACTGGG 1 cut(s) 448
Bpu10I CCTNAGC 1 cut(s) 473
Bpu1102I GCTNAGC 1 cut(s) 862
BpuEI CTTGAG 1 cut(s) 480
BsaBI GATNNNNATC 1 cut(s) 579
BsaJI CCNNGG 5 cut(s) 584, 1251, 1263, 1341, 1402
BsaXI ACNNNNNCTCC 4 cut(s) 170, 200, 299, 329
Bsc4I CCNNNNNNNGG 3 cut(s) 33, 307, 1408
Bse1I ACTGG 2 cut(s) 84, 443
Bse21I CCTNAGG 1 cut(s) 329
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 3 cut(s) 280, 586, 1343
BseDI CCNNGG 5 cut(s) 584, 1251, 1263, 1341, 1402
BseGI GGATG 7 cut(s) 365, 580, 628, 995, 1102, 1333, 1398
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 3 cut(s) 33, 307, 1408
BseMII CTCAG 5 cut(s) 320, 464, 654, 685, 840
BseNI ACTGG 2 cut(s) 84, 443
BseRI GAGGAG 4 cut(s) 320, 346, 392, 648
BseXI GCAGC 4 cut(s) 372, 1018, 1268, 1397
BseYI CCCAGC 1 cut(s) 758
Bsh1236I CGCG 1 cut(s) 783
BshFI GGCC 6 cut(s) 115, 243, 283, 603, 901, 1363
BsiHKAI GWGCWC 1 cut(s) 195
BsiHKCI CYCGRG 2 cut(s) 302, 1355
BslFI GGGAC 2 cut(s) 898, 1261
BslI CCNNNNNNNGG 3 cut(s) 33, 307, 1408
BsmAI GTCTC 3 cut(s) 190, 407, 1148
BsmBI CGTCTC 1 cut(s) 407
BsmFI GGGAC 2 cut(s) 898, 1261
BsnI GGCC 6 cut(s) 115, 243, 283, 603, 901, 1363
BsoBI CYCGRG 2 cut(s) 302, 1355
Bsp1286I GDGCHC 2 cut(s) 10, 195
Bsp143I GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
Bsp1720I GCTNAGC 1 cut(s) 862
Bsp19I CCATGG 1 cut(s) 1251
BspACI CCGC 7 cut(s) 10, 153, 382, 395, 783, 898, 1245
BspANI GGCC 6 cut(s) 115, 243, 283, 603, 901, 1363
BspCNI CTCAG 5 cut(s) 321, 465, 655, 684, 841
BspFNI CGCG 1 cut(s) 783
BspHI TCATGA 2 cut(s) 538, 606
BspLI GGNNCC 4 cut(s) 7, 38, 326, 1249
BspMAI CTGCAG 1 cut(s) 515
BspPI GGATC 1 cut(s) 1059
BsrBI CCGCTC 2 cut(s) 382, 898
BsrI ACTGG 2 cut(s) 84, 443
BssECI CCNNGG 5 cut(s) 584, 1251, 1263, 1341, 1402
BssMI GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
BssSI CACGAG 2 cut(s) 410, 891
BssT1I CCWWGG 2 cut(s) 1251, 1402
Bst2BI CACGAG 2 cut(s) 410, 891
Bst2UI CCWGG 3 cut(s) 280, 586, 1343
Bst4CI ACNGT 3 cut(s) 61, 638, 1267
Bst6I CTCTTC 2 cut(s) 1166, 1400
BstC8I GCNNGC 7 cut(s) 10, 276, 345, 420, 449, 1338, 1390
BstDEI CTNAG 8 cut(s) 329, 473, 663, 671, 737, 849, 862, 1167
BstDSI CCRYGG 2 cut(s) 1251, 1263
BstENI CCTNNNNNAGG 1 cut(s) 305
BstF5I GGATG 7 cut(s) 365, 580, 628, 995, 1102, 1333, 1398
BstFNI CGCG 1 cut(s) 783
BstH2I RGCGCY 2 cut(s) 485, 1282
BstHHI GCGC 5 cut(s) 409, 484, 769, 995, 1281
BstKTI GATC 6 cut(s) 357, 544, 571, 733, 775, 1054
BstMAI GTCTC 3 cut(s) 190, 407, 1148
BstMBI GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
BstMWI GCNNNNNNNGC 8 cut(s) 105, 280, 333, 415, 424, 1193, 1316, 1337
BstNI CCWGG 3 cut(s) 280, 586, 1343
BstNSI RCATGY 1 cut(s) 968
BstSCI CCNGG 3 cut(s) 278, 584, 1341
BstSFI CTRYAG 2 cut(s) 511, 553
BstUI CGCG 1 cut(s) 783
BstV1I GCAGC 4 cut(s) 372, 1018, 1268, 1397
BstX2I RGATCY 2 cut(s) 772, 1051
BstYI RGATCY 2 cut(s) 772, 1051
Bsu36I CCTNAGG 1 cut(s) 329
BsuI GTATCC 1 cut(s) 1082
BsuRI GGCC 6 cut(s) 115, 243, 283, 603, 901, 1363
BtgI CCRYGG 2 cut(s) 1251, 1263
BtrI CACGTC 1 cut(s) 159
BtsCI GGATG 7 cut(s) 365, 580, 628, 995, 1102, 1333, 1398
BtsI GCAGTG 3 cut(s) 520, 921, 1056
BtsIMutI CAGTG 4 cut(s) 436, 520, 921, 1056
Cac8I GCNNGC 7 cut(s) 10, 276, 345, 420, 449, 1338, 1390
CciI TCATGA 2 cut(s) 538, 606
CfoI GCGC 5 cut(s) 409, 484, 769, 995, 1281
Cfr13I GGNCC 2 cut(s) 282, 1248
CseI GACGC 2 cut(s) 424, 697
Csp6I GTAC 5 cut(s) 130, 634, 639, 857, 1375
CviQI GTAC 5 cut(s) 130, 634, 639, 857, 1375
DdeI CTNAG 8 cut(s) 329, 473, 663, 671, 737, 849, 862, 1167
DpnI GATC 6 cut(s) 356, 543, 570, 732, 774, 1053
DpnII GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
DrdI GACNNNNNNGTC 1 cut(s) 182
DseDI GACNNNNNNGTC 1 cut(s) 182
EaeI YGGCCR 3 cut(s) 113, 899, 1361
Eam1104I CTCTTC 2 cut(s) 1166, 1400
EarI CTCTTC 2 cut(s) 1166, 1400
EciI GGCGGA 1 cut(s) 410
Eco130I CCWWGG 2 cut(s) 1251, 1402
Eco24I GRGCYC 1 cut(s) 10
Eco47I GGWCC 1 cut(s) 1248
Eco57I CTGAAG 1 cut(s) 923
Eco81I CCTNAGG 1 cut(s) 329
Eco88I CYCGRG 2 cut(s) 302, 1355
EcoNI CCTNNNNNAGG 1 cut(s) 305
EcoRI GAATTC 1 cut(s) 1162
EcoRII CCWGG 3 cut(s) 278, 584, 1341
EcoT14I CCWWGG 2 cut(s) 1251, 1402
EcoT38I GRGCYC 1 cut(s) 10
ErhI CCWWGG 2 cut(s) 1251, 1402
Esp3I CGTCTC 1 cut(s) 407
FaqI GGGAC 2 cut(s) 898, 1261
FauI CCCGC 2 cut(s) 17, 1238
FauNDI CATATG 1 cut(s) 110
FbaI TGATCA 1 cut(s) 568
FblI GTMKAC 1 cut(s) 219
Fnu4HI GCNGC 9 cut(s) 13, 153, 383, 386, 784, 899, 1007, 1282, 1386
FokI GGATG 7 cut(s) 372, 587, 635, 982, 1109, 1340, 1385
FriOI GRGCYC 1 cut(s) 10
Fsp4HI GCNGC 9 cut(s) 13, 153, 383, 386, 784, 899, 1007, 1282, 1386
FspBI CTAG 1 cut(s) 770
GlaI GCGC 5 cut(s) 408, 483, 768, 994, 1280
GluI GCNGC 9 cut(s) 13, 153, 383, 386, 784, 899, 1007, 1282, 1386
GsaI CCCAGC 1 cut(s) 762
HaeII RGCGCY 2 cut(s) 485, 1282
HaeIII GGCC 6 cut(s) 115, 243, 283, 603, 901, 1363
HgaI GACGC 2 cut(s) 424, 697
HhaI GCGC 5 cut(s) 409, 484, 769, 995, 1281
Hin6I GCGC 5 cut(s) 407, 482, 767, 993, 1279
HinP1I GCGC 5 cut(s) 407, 482, 767, 993, 1279
HindIII AAGCTT 1 cut(s) 1035
HinfI GANTC 7 cut(s) 21, 68, 264, 349, 809, 1181, 1220
HphI GGTGA 2 cut(s) 697, 1251
Hpy166II GTNNAC 2 cut(s) 220, 1137
Hpy188I TCNGA 7 cut(s) 76, 175, 190, 354, 359, 716, 942
Hpy8I GTNNAC 2 cut(s) 220, 1137
Hpy99I CGWCG 1 cut(s) 1244
HpyAV CCTTC 4 cut(s) 130, 365, 612, 1388
HpyCH4III ACNGT 3 cut(s) 61, 638, 1267
HpyCH4IV ACGT 2 cut(s) 158, 213
HpyCH4V TGCA 8 cut(s) 513, 880, 908, 959, 983, 1150, 1336, 1421
HpyF10VI GCNNNNNNNGC 8 cut(s) 105, 280, 333, 415, 424, 1193, 1316, 1337
HpyF3I CTNAG 8 cut(s) 329, 473, 663, 671, 737, 849, 862, 1167
HpySE526I ACGT 2 cut(s) 158, 213
HspAI GCGC 5 cut(s) 407, 482, 767, 993, 1279
Ksp22I TGATCA 1 cut(s) 568
Kzo9I GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
LmnI GCTCC 7 cut(s) 5, 20, 90, 211, 324, 333, 379
Lsp1109I GCAGC 4 cut(s) 372, 1018, 1268, 1397
LweI GCATC 6 cut(s) 350, 789, 968, 1004, 1318, 1408
MaeI CTAG 1 cut(s) 770
MaeII ACGT 2 cut(s) 158, 213
MaeIII GTNAC 3 cut(s) 685, 919, 933
MalI GATC 6 cut(s) 356, 543, 570, 732, 774, 1053
MbiI CCGCTC 2 cut(s) 382, 898
MboI GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
MboII GAAGA 4 cut(s) 622, 725, 1183, 1387
MflI RGATCY 2 cut(s) 772, 1051
MhlI GDGCHC 2 cut(s) 10, 195
MluCI AATT 8 cut(s) 296, 702, 777, 790, 826, 1162, 1232, 1447
MmeI TCCRAC 1 cut(s) 198
MseI TTAA 3 cut(s) 51, 248, 1019
MspA1I CMGCKG 2 cut(s) 12, 1132
MspR9I CCNGG 3 cut(s) 280, 586, 1343
MvaI CCWGG 3 cut(s) 280, 586, 1343
MvnI CGCG 1 cut(s) 783
MwoI GCNNNNNNNGC 8 cut(s) 105, 280, 333, 415, 424, 1193, 1316, 1337
NcoI CCATGG 1 cut(s) 1251
NdeI CATATG 1 cut(s) 110
NdeII GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
NlaIV GGNNCC 4 cut(s) 7, 38, 326, 1249
NmeAIII GCCGAG 1 cut(s) 1255
NmuCI GTSAC 3 cut(s) 685, 919, 933
NspI RCATGY 1 cut(s) 968
PaeR7I CTCGAG 1 cut(s) 302
PagI TCATGA 2 cut(s) 538, 606
PciI ACATGT 1 cut(s) 964
PcsI WCGNNNNNNNCGW 2 cut(s) 72, 282
PfeI GAWTC 7 cut(s) 21, 68, 264, 349, 809, 1181, 1220
PkrI GCNGC 9 cut(s) 14, 154, 384, 387, 785, 900, 1008, 1283, 1387
PscI ACATGT 1 cut(s) 964
Psp1406I AACGTT 1 cut(s) 213
Psp6I CCWGG 3 cut(s) 278, 584, 1341
PspFI CCCAGC 1 cut(s) 758
PspGI CCWGG 3 cut(s) 278, 584, 1341
PspN4I GGNNCC 4 cut(s) 7, 38, 326, 1249
PspPI GGNCC 2 cut(s) 282, 1248
PspXI VCTCGAGB 1 cut(s) 302
PstI CTGCAG 1 cut(s) 515
PsuI RGATCY 2 cut(s) 772, 1051
PvuII CAGCTG 1 cut(s) 1132
RsaI GTAC 5 cut(s) 131, 635, 640, 858, 1376
RsaNI GTAC 5 cut(s) 130, 634, 639, 857, 1375
SaqAI TTAA 3 cut(s) 51, 248, 1019
SatI GCNGC 9 cut(s) 13, 153, 383, 386, 784, 899, 1007, 1282, 1386
Sau3AI GATC 6 cut(s) 354, 541, 568, 730, 772, 1051
Sau96I GGNCC 2 cut(s) 282, 1248
ScrFI CCNGG 3 cut(s) 280, 586, 1343
SduI GDGCHC 2 cut(s) 10, 195
SfaNI GCATC 6 cut(s) 350, 789, 968, 1004, 1318, 1408
SfcI CTRYAG 2 cut(s) 511, 553
Sfr274I CTCGAG 1 cut(s) 302
SinI GGWCC 1 cut(s) 1248
SlaI CTCGAG 1 cut(s) 302
SmlI CTYRAG 2 cut(s) 302, 495
SmoI CTYRAG 2 cut(s) 302, 495
Sse9I AATT 8 cut(s) 296, 702, 777, 790, 826, 1162, 1232, 1447
SsiI CCGC 7 cut(s) 10, 153, 382, 395, 783, 898, 1245
SspI AATATT 1 cut(s) 1074
SspMI CTAG 1 cut(s) 770
StyD4I CCNGG 3 cut(s) 278, 584, 1341
StyI CCWWGG 2 cut(s) 1251, 1402
TaaI ACNGT 3 cut(s) 61, 638, 1267
TaiI ACGT 2 cut(s) 161, 216
TaqI TCGA 7 cut(s) 66, 138, 234, 303, 504, 1192, 1239
TasI AATT 8 cut(s) 296, 702, 777, 790, 826, 1162, 1232, 1447
TatI WGTACW 2 cut(s) 129, 638
TauI GCSGC 4 cut(s) 155, 385, 786, 901
TfiI GAWTC 7 cut(s) 21, 68, 264, 349, 809, 1181, 1220
Tru1I TTAA 3 cut(s) 51, 248, 1019
Tru9I TTAA 3 cut(s) 51, 248, 1019
TscAI CASTG 4 cut(s) 443, 520, 928, 1063
TseFI GTSAC 3 cut(s) 685, 919, 933
TseI GCWGC 5 cut(s) 12, 385, 1006, 1281, 1385
Tsp45I GTSAC 3 cut(s) 685, 919, 933
TspDTI ATGAA 9 cut(s) 161, 391, 623, 900, 1002, 1083, 1113, 1225, 1387
TspGWI ACGGA 2 cut(s) 140, 858
TspRI CASTG 4 cut(s) 443, 520, 928, 1063
VpaK11BI GGWCC 1 cut(s) 1248
XagI CCTNNNNNAGG 1 cut(s) 305
XapI RAATTY 3 cut(s) 790, 1162, 1447
XceI RCATGY 1 cut(s) 968
XhoI CTCGAG 1 cut(s) 302
XmiI GTMKAC 1 cut(s) 219
XspI CTAG 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.