Rh3BG133200

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
11229045 .. 11233185
4141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG133200.1

Sequence Viewer

Length: 1302 bp
ATGGGAGCCCGCTGCTCCAGATTCTCTCTCTGCTGGTTCCACTCCCACCTTAAACCGTCCGTCCTCGAATCCACCGACCTCGAGAATGGGGGCGGCAAAAGCGACAAAAACTCGTGCCCGAGCTTCACCGAGTTCAGCTTAGACCAACTGAAAGCCGCCACGTGCGGCTTCTCCTCCGACAACATAGTCTCGGAGCACGGCGAGAAAGCCCCCAACGTTGTCTACAAAGGAAAGCTCGACAACAACGCCGACCGTTGGATCGCCGTCAAGCGCTTCAACAAGCTGGCCTGGCCCGATTCTCGCCAATTCCTCGAGGAAGCAAGATCGGTTGGGACATTGAGAAGTGAGAGATTGGCGAATCTGATTGGGTGTTGTTGTGAAGGAGATGAGAGGTTGTTGGTGGCTGAGTTTATGCCACATGAGACTTTGGCAAAGCATTTGTTTCATTGGGAGAGCCAGCCAATGAGATGGGCTATGAGGTTGAGGGTGGCTCTGTATTTGGCTCAGGCTCTTGAGTATTGTAGTGGTAAAGGGCGCGCATTGTATCATGATCTCAATGCTTACAGGGTTTTGTTTGATAAGGATGCGAATCCTAGGCTGTCCTGCTTTGGACTTATGAAGAATAGCAGGGATGGGAAGAGTTACAGTACTAACTTGGCCTTTACCCCACCAGAGTACCTCAGGACAGGTAGGGTGACACAAGAAAGTGTAGTTTACAGCTTTGGAACCTTGTTGCTAGATCTTCTAAGTGGCAAACATATTCCCCCCAGCCATGCACTAGATCTTATTCGTGGCAAGAATTTCCTGATGCTGATGGATTCGGCTCTGGAGGGTAATTTCTCAAATGATGATGGAACTGAGTTAGTACGCTTGGCTTCCCGTTGTCTGCAATATGAAGCTCGTGAGAGGCCTAATGCGAAATCCCTTGCCACTGCTCTTATGTCACTTCAGAAAGAAACAGAGGTTGCATCCTATGTTTTGATGGGTATCCCACAAGAAACTGCATCGTCAACACAGCCACTGTCATTAACACCTTTTGGTGAAGCTTGTTTGAGAATGGATCTGACAGCCATACATGAAATACTGGAGAAGAATGGATACAAGGATGATGAGGGAATTGCTAATGAGCTATCTTTCCAGCTGTGGACTAATCAAATGCAGGAGACCTTGGATTCTAAGAAGAGTGCAGATTCTGCTTTTAGAGCGAAAGACTACGCAACTGCAATTGATTCCTATACACAAGTGAGTCCTCTCTCTCAGAATAATCTTAGACTGGCGTGCAATAATCACGCTTTCATTTAA

Protein Analysis

433

Amino Acids

48.55

Weight (kDa)

6.29

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 72 - 312 8.6e-27 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 73 - 309 2e-20 Protein kinase domain
TPR_BSK1_C PF25575 348 - 415 4.6e-32 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 185
AbsI CCTCGAGG 1 cut(s) 311
AccI GTMKAC 1 cut(s) 222
AccII CGCG 1 cut(s) 537
AciI CCGC 4 cut(s) 10, 93, 156, 165
AclI AACGTT 1 cut(s) 216
AclWI GGATC 2 cut(s) 266, 1068
AcsI RAATTY 1 cut(s) 799
AcuI CTGAAG 1 cut(s) 932
AcvI CACGTG 1 cut(s) 162
AfaI GTAC 3 cut(s) 649, 677, 867
AfeI AGCGCT 1 cut(s) 272
AfiI CCNNNNNNNGG 1 cut(s) 255
AgsI TTSAA 1 cut(s) 277
AjnI CCWGG 1 cut(s) 287
AluBI AGCT 9 cut(s) 123, 138, 235, 283, 720, 899, 1046, 1129, 1141
AluI AGCT 9 cut(s) 123, 138, 235, 283, 720, 899, 1046, 1129, 1141
Alw21I GWGCWC 1 cut(s) 198
Alw26I GTCTC 3 cut(s) 193, 416, 1157
AlwI GGATC 2 cut(s) 266, 1068
AlwNI CAGNNNCTG 2 cut(s) 1021, 1193
Ama87I CYCGRG 3 cut(s) 80, 118, 311
Aor51HI AGCGCT 1 cut(s) 272
AoxI GGCC 4 cut(s) 285, 290, 657, 908
ApeKI GCWGC 1 cut(s) 12
ApoI RAATTY 1 cut(s) 799
AspA2I CCTAGG 1 cut(s) 593
AspLEI GCGC 3 cut(s) 273, 537, 539
AspS9I GGNCC 1 cut(s) 291
AsuHPI GGTGA 3 cut(s) 118, 706, 1052
AvaI CYCGRG 3 cut(s) 80, 118, 311
AvrII CCTAGG 1 cut(s) 593
AxyI CCTNAGG 1 cut(s) 680
BaeGI GKGCMC 1 cut(s) 119
BaeI ACNNNNGTAYC 2 cut(s) 659, 692
BanII GRGCYC 1 cut(s) 10
BarI GAAGNNNNNNTAC 2 cut(s) 1082, 1114
BauI CACGAG 2 cut(s) 112, 900
BbrPI CACGTG 1 cut(s) 162
Bbv12I GWGCWC 1 cut(s) 198
BccI CCATC 5 cut(s) 462, 626, 808, 845, 976
BceAI ACGGC 2 cut(s) 214, 248
BciT130I CCWGG 1 cut(s) 289
BciVI GTATCC 2 cut(s) 998, 1091
BcoDI GTCTC 3 cut(s) 193, 416, 1157
BfaI CTAG 3 cut(s) 594, 737, 779
BfoI RGCGCY 1 cut(s) 274
BfuI GTATCC 2 cut(s) 998, 1091
BglII AGATCT 2 cut(s) 739, 781
BisI GCNGC 4 cut(s) 13, 94, 156, 166
BlnI CCTAGG 1 cut(s) 593
BlsI GCNGC 4 cut(s) 14, 95, 157, 167
BmcAI AGTACT 1 cut(s) 649
Bme1390I CCNGG 1 cut(s) 289
BmeT110I CYCGRG 3 cut(s) 80, 118, 311
BmgT120I GGNCC 1 cut(s) 291
BmiI GGNNCC 3 cut(s) 7, 38, 727
BmrFI CCNGG 1 cut(s) 289
BmsI GCATC 4 cut(s) 574, 798, 977, 1013
BplI GAGNNNNNCTC 2 cut(s) 475, 507
BpmI CTGGAG 2 cut(s) 848, 1106
Bpu10I CCTNAGC 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 533
BsaAI YACGTR 1 cut(s) 162
BsaBI GATNNNNATC 2 cut(s) 588, 986
BsaI GGTCTC 1 cut(s) 1157
BsaJI CCNNGG 2 cut(s) 593, 1167
Bsc4I CCNNNNNNNGG 1 cut(s) 255
Bse1I ACTGG 2 cut(s) 1089, 1278
Bse21I CCTNAGG 1 cut(s) 680
Bse8I GATNNNNATC 2 cut(s) 588, 986
BseBI CCWGG 1 cut(s) 289
BseDI CCNNGG 2 cut(s) 593, 1167
BseGI GGATG 4 cut(s) 589, 637, 968, 1111
BseJI GATNNNNATC 2 cut(s) 588, 986
BseLI CCNNNNNNNGG 1 cut(s) 255
BseMII CTCAG 5 cut(s) 396, 518, 694, 849, 1271
BseNI ACTGG 2 cut(s) 1089, 1278
BsePI GCGCGC 1 cut(s) 535
BseRI GAGGAG 1 cut(s) 163
BseSI GKGCMC 1 cut(s) 119
BseYI CCCAGC 1 cut(s) 767
BsgI GTGCAG 1 cut(s) 1206
Bsh1236I CGCG 1 cut(s) 537
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 4 cut(s) 287, 292, 659, 910
BsiEI CGRYCG 1 cut(s) 253
BsiHKAI GWGCWC 1 cut(s) 198
BsiHKCI CYCGRG 3 cut(s) 80, 118, 311
BslFI GGGAC 1 cut(s) 346
BslI CCNNNNNNNGG 1 cut(s) 255
BsmAI GTCTC 3 cut(s) 193, 416, 1157
BsmFI GGGAC 1 cut(s) 346
BsnI GGCC 4 cut(s) 287, 292, 659, 910
Bso31I GGTCTC 1 cut(s) 1157
BsoBI CYCGRG 3 cut(s) 80, 118, 311
Bsp1286I GDGCHC 3 cut(s) 10, 119, 198
Bsp143I GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
BspACI CCGC 4 cut(s) 10, 93, 156, 165
BspANI GGCC 4 cut(s) 287, 292, 659, 910
BspCNI CTCAG 5 cut(s) 397, 517, 693, 850, 1270
BspFNI CGCG 1 cut(s) 537
BspHI TCATGA 1 cut(s) 547
BspLI GGNNCC 3 cut(s) 7, 38, 727
BspPI GGATC 2 cut(s) 266, 1068
BspTNI GGTCTC 1 cut(s) 1157
BsrI ACTGG 2 cut(s) 1089, 1278
BssECI CCNNGG 2 cut(s) 593, 1167
BssHII GCGCGC 1 cut(s) 535
BssMI GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
BssSI CACGAG 2 cut(s) 112, 900
BssT1I CCWWGG 2 cut(s) 593, 1167
Bst2BI CACGAG 2 cut(s) 112, 900
Bst2UI CCWGG 1 cut(s) 289
Bst4CI ACNGT 4 cut(s) 57, 254, 647, 1023
Bst6I CTCTTC 2 cut(s) 632, 1175
BstAPI GCANNNNNTGC 1 cut(s) 1193
BstBAI YACGTR 1 cut(s) 162
BstC8I GCNNGC 5 cut(s) 10, 285, 458, 537, 1279
BstDEI CTNAG 9 cut(s) 139, 405, 504, 680, 746, 858, 1176, 1257, 1268
BstF5I GGATG 4 cut(s) 589, 637, 968, 1111
BstFNI CGCG 1 cut(s) 537
BstH2I RGCGCY 1 cut(s) 274
BstHHI GCGC 3 cut(s) 273, 537, 539
BstKTI GATC 6 cut(s) 261, 326, 553, 742, 784, 1063
BstMAI GTCTC 3 cut(s) 193, 416, 1157
BstMBI GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 4 cut(s) 99, 289, 1193, 1202
BstNI CCWGG 1 cut(s) 289
BstSCI CCNGG 1 cut(s) 287
BstSLI GKGCMC 1 cut(s) 119
BstUI CGCG 1 cut(s) 537
BstX2I RGATCY 3 cut(s) 739, 781, 1060
BstXI CCANNNNNNTGG 1 cut(s) 468
BstYI RGATCY 3 cut(s) 739, 781, 1060
Bsu36I CCTNAGG 1 cut(s) 680
BsuI GTATCC 2 cut(s) 998, 1091
BsuRI GGCC 4 cut(s) 287, 292, 659, 910
BtsCI GGATG 4 cut(s) 589, 637, 968, 1111
BtsI GCAGTG 1 cut(s) 930
BtsIMutI CAGTG 2 cut(s) 930, 1019
Cac8I GCNNGC 5 cut(s) 10, 285, 458, 537, 1279
CaiI CAGNNNCTG 2 cut(s) 1021, 1193
CciI TCATGA 1 cut(s) 547
CfoI GCGC 3 cut(s) 273, 537, 539
Cfr13I GGNCC 1 cut(s) 291
Csp6I GTAC 3 cut(s) 648, 676, 866
CviAII CATG 4 cut(s) 419, 548, 773, 1076
CviQI GTAC 3 cut(s) 648, 676, 866
DdeI CTNAG 9 cut(s) 139, 405, 504, 680, 746, 858, 1176, 1257, 1268
DpnI GATC 6 cut(s) 260, 325, 552, 741, 783, 1062
DpnII GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
DrdI GACNNNNNNGTC 1 cut(s) 185
DseDI GACNNNNNNGTC 1 cut(s) 185
Eam1104I CTCTTC 2 cut(s) 632, 1175
EarI CTCTTC 2 cut(s) 632, 1175
Eco130I CCWWGG 2 cut(s) 593, 1167
Eco147I AGGCCT 1 cut(s) 910
Eco24I GRGCYC 1 cut(s) 10
Eco31I GGTCTC 1 cut(s) 1157
Eco47III AGCGCT 1 cut(s) 272
Eco57I CTGAAG 1 cut(s) 932
Eco72I CACGTG 1 cut(s) 162
Eco81I CCTNAGG 1 cut(s) 680
Eco88I CYCGRG 3 cut(s) 80, 118, 311
EcoRII CCWGG 1 cut(s) 287
EcoT14I CCWWGG 2 cut(s) 593, 1167
EcoT38I GRGCYC 1 cut(s) 10
ErhI CCWWGG 2 cut(s) 593, 1167
FaeI CATG 4 cut(s) 422, 551, 776, 1079
FaqI GGGAC 1 cut(s) 346
FatI CATG 4 cut(s) 418, 547, 772, 1075
FauI CCCGC 1 cut(s) 17
FblI GTMKAC 1 cut(s) 222
Fnu4HI GCNGC 4 cut(s) 13, 94, 156, 166
FokI GGATG 4 cut(s) 596, 644, 955, 1118
FriOI GRGCYC 1 cut(s) 10
Fsp4HI GCNGC 4 cut(s) 13, 94, 156, 166
FspBI CTAG 3 cut(s) 594, 737, 779
GlaI GCGC 3 cut(s) 272, 536, 538
GluI GCNGC 4 cut(s) 13, 94, 156, 166
GsaI CCCAGC 1 cut(s) 771
GsuI CTGGAG 2 cut(s) 848, 1106
HaeII RGCGCY 1 cut(s) 274
HaeIII GGCC 4 cut(s) 287, 292, 659, 910
HhaI GCGC 3 cut(s) 273, 537, 539
Hin1II CATG 4 cut(s) 422, 551, 776, 1079
Hin6I GCGC 3 cut(s) 271, 535, 537
HinP1I GCGC 3 cut(s) 271, 535, 537
HincII GTYRAC 1 cut(s) 1011
HindII GTYRAC 1 cut(s) 1011
HindIII AAGCTT 1 cut(s) 1044
HphI GGTGA 3 cut(s) 118, 706, 1052
Hpy166II GTNNAC 4 cut(s) 223, 715, 1011, 1146
Hpy188I TCNGA 6 cut(s) 178, 193, 363, 951, 1065, 1260
Hpy188III TCNNGA 8 cut(s) 18, 82, 512, 548, 682, 805, 827, 902
Hpy8I GTNNAC 4 cut(s) 223, 715, 1011, 1146
HpyAV CCTTC 1 cut(s) 374
HpyCH4III ACNGT 4 cut(s) 57, 254, 647, 1023
HpyCH4IV ACGT 2 cut(s) 161, 216
HpyCH4V TGCA 8 cut(s) 776, 889, 968, 1004, 1159, 1187, 1223, 1281
HpyF10VI GCNNNNNNNGC 4 cut(s) 99, 289, 1193, 1202
HpyF3I CTNAG 9 cut(s) 139, 405, 504, 680, 746, 858, 1176, 1257, 1268
HpySE526I ACGT 2 cut(s) 161, 216
Hsp92II CATG 4 cut(s) 422, 551, 776, 1079
HspAI GCGC 3 cut(s) 271, 535, 537
Kzo9I GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
LmnI GCTCC 3 cut(s) 5, 20, 193
LweI GCATC 4 cut(s) 574, 798, 977, 1013
MaeI CTAG 3 cut(s) 594, 737, 779
MaeII ACGT 2 cut(s) 161, 216
MaeIII GTNAC 3 cut(s) 641, 694, 942
MalI GATC 6 cut(s) 260, 325, 552, 741, 783, 1062
MboI GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
MboII GAAGA 5 cut(s) 631, 649, 734, 1102, 1192
MfeI CAATTG 1 cut(s) 1224
MflI RGATCY 3 cut(s) 739, 781, 1060
MhlI GDGCHC 3 cut(s) 10, 119, 198
MluCI AATT 5 cut(s) 305, 799, 835, 1116, 1224
MlyI GAGTC 1 cut(s) 1255
MmeI TCCRAC 2 cut(s) 201, 236
MseI TTAA 3 cut(s) 51, 1028, 1300
MspA1I CMGCKG 2 cut(s) 12, 1141
MspR9I CCNGG 1 cut(s) 289
MunI CAATTG 1 cut(s) 1224
MvaI CCWGG 1 cut(s) 289
MvnI CGCG 1 cut(s) 537
MwoI GCNNNNNNNGC 4 cut(s) 99, 289, 1193, 1202
NdeII GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
NlaIII CATG 4 cut(s) 422, 551, 776, 1079
NlaIV GGNNCC 3 cut(s) 7, 38, 727
NmuCI GTSAC 2 cut(s) 694, 942
PaeR7I CTCGAG 2 cut(s) 80, 311
PagI TCATGA 1 cut(s) 547
PauI GCGCGC 1 cut(s) 535
PceI AGGCCT 1 cut(s) 910
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PfeI GAWTC 9 cut(s) 21, 68, 296, 358, 589, 818, 1172, 1190, 1229
PkrI GCNGC 4 cut(s) 14, 95, 157, 167
PleI GAGTC 1 cut(s) 1254
PmaCI CACGTG 1 cut(s) 162
PmlI CACGTG 1 cut(s) 162
PpsI GAGTC 1 cut(s) 1254
Ppu21I YACGTR 1 cut(s) 162
Psp1406I AACGTT 1 cut(s) 216
Psp6I CCWGG 1 cut(s) 287
PspCI CACGTG 1 cut(s) 162
PspFI CCCAGC 1 cut(s) 767
PspGI CCWGG 1 cut(s) 287
PspN4I GGNNCC 3 cut(s) 7, 38, 727
PspPI GGNCC 1 cut(s) 291
PspXI VCTCGAGB 1 cut(s) 311
PstNI CAGNNNCTG 2 cut(s) 1021, 1193
PsuI RGATCY 3 cut(s) 739, 781, 1060
PteI GCGCGC 1 cut(s) 535
PvuII CAGCTG 1 cut(s) 1141
RsaI GTAC 3 cut(s) 649, 677, 867
RsaNI GTAC 3 cut(s) 648, 676, 866
SaqAI TTAA 3 cut(s) 51, 1028, 1300
SatI GCNGC 4 cut(s) 13, 94, 156, 166
Sau3AI GATC 6 cut(s) 258, 323, 550, 739, 781, 1060
Sau96I GGNCC 1 cut(s) 291
ScaI AGTACT 1 cut(s) 649
SchI GAGTC 1 cut(s) 1255
ScrFI CCNGG 1 cut(s) 289
SduI GDGCHC 3 cut(s) 10, 119, 198
SfaNI GCATC 4 cut(s) 574, 798, 977, 1013
Sfr274I CTCGAG 2 cut(s) 80, 311
SlaI CTCGAG 2 cut(s) 80, 311
SmlI CTYRAG 3 cut(s) 80, 311, 512
SmoI CTYRAG 3 cut(s) 80, 311, 512
Sse9I AATT 5 cut(s) 305, 799, 835, 1116, 1224
SseBI AGGCCT 1 cut(s) 910
SsiI CCGC 4 cut(s) 10, 93, 156, 165
SspMI CTAG 3 cut(s) 594, 737, 779
StuI AGGCCT 1 cut(s) 910
StyD4I CCNGG 1 cut(s) 287
StyI CCWWGG 2 cut(s) 593, 1167
TaaI ACNGT 4 cut(s) 57, 254, 647, 1023
TaiI ACGT 2 cut(s) 164, 219
TaqI TCGA 4 cut(s) 66, 81, 237, 312
TasI AATT 5 cut(s) 305, 799, 835, 1116, 1224
TatI WGTACW 1 cut(s) 647
TauI GCSGC 3 cut(s) 96, 158, 168
TfiI GAWTC 9 cut(s) 21, 68, 296, 358, 589, 818, 1172, 1190, 1229
Tru1I TTAA 3 cut(s) 51, 1028, 1300
Tru9I TTAA 3 cut(s) 51, 1028, 1300
TscAI CASTG 2 cut(s) 937, 1026
TseFI GTSAC 2 cut(s) 694, 942
TseI GCWGC 1 cut(s) 12
Tsp45I GTSAC 2 cut(s) 694, 942
TspDTI ATGAA 5 cut(s) 434, 632, 909, 1092, 1285
TspGWI ACGGA 1 cut(s) 49
TspRI CASTG 2 cut(s) 937, 1026
XapI RAATTY 1 cut(s) 799
XhoI CTCGAG 2 cut(s) 80, 311
XmaJI CCTAGG 1 cut(s) 593
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 3 cut(s) 594, 737, 779
ZrmI AGTACT 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.