The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity.
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PP2C | PF00481 | 88 - 337 | 5.5e-41 | Protein phosphatase 2C |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 821 |
| Acc65I | GGTACC | 1 cut(s) | 542 |
| AccB1I | GGYRCC | 2 cut(s) | 258, 542 |
| AciI | CCGC | 5 cut(s) | 347, 488, 540, 647, 1056 |
| AclWI | GGATC | 3 cut(s) | 293, 338, 392 |
| AcsI | RAATTY | 1 cut(s) | 251 |
| AcuI | CTGAAG | 2 cut(s) | 174, 873 |
| AfaI | GTAC | 3 cut(s) | 79, 544, 622 |
| AflIII | ACRYGT | 1 cut(s) | 80 |
| AgsI | TTSAA | 5 cut(s) | 52, 409, 673, 930, 960 |
| AjnI | CCWGG | 2 cut(s) | 225, 784 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 52, 84 |
| AluBI | AGCT | 7 cut(s) | 98, 383, 505, 611, 642, 658, 1007 |
| AluI | AGCT | 7 cut(s) | 98, 383, 505, 611, 642, 658, 1007 |
| Alw26I | GTCTC | 4 cut(s) | 368, 557, 807, 1095 |
| AlwI | GGATC | 3 cut(s) | 293, 338, 392 |
| Ama87I | CYCGRG | 1 cut(s) | 606 |
| ApeKI | GCWGC | 5 cut(s) | 98, 234, 1004, 1007, 1010 |
| ApoI | RAATTY | 1 cut(s) | 251 |
| Asp718I | GGTACC | 1 cut(s) | 542 |
| AsuHPI | GGTGA | 5 cut(s) | 547, 584, 611, 774, 1094 |
| AsuNHI | GCTAGC | 1 cut(s) | 898 |
| AvaI | CYCGRG | 1 cut(s) | 606 |
| AxyI | CCTNAGG | 1 cut(s) | 687 |
| BaeGI | GKGCMC | 1 cut(s) | 9 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 526, 559 |
| BanI | GGYRCC | 2 cut(s) | 258, 542 |
| BbvI | GCAGC | 5 cut(s) | 85, 221, 994, 1016, 1022 |
| BccI | CCATC | 4 cut(s) | 164, 287, 629, 902 |
| BciT130I | CCWGG | 2 cut(s) | 227, 786 |
| BclI | TGATCA | 2 cut(s) | 442, 496 |
| BcoDI | GTCTC | 4 cut(s) | 368, 557, 807, 1095 |
| BfaI | CTAG | 5 cut(s) | 380, 395, 791, 801, 899 |
| BfmI | CTRYAG | 2 cut(s) | 99, 1008 |
| BisI | GCNGC | 8 cut(s) | 99, 235, 347, 489, 648, 1005, 1008, 1011 |
| BlsI | GCNGC | 8 cut(s) | 100, 236, 348, 490, 649, 1006, 1009, 1012 |
| Bme1390I | CCNGG | 2 cut(s) | 227, 786 |
| BmeT110I | CYCGRG | 1 cut(s) | 606 |
| BmiI | GGNNCC | 3 cut(s) | 260, 426, 544 |
| BmrFI | CCNGG | 2 cut(s) | 227, 786 |
| BmtI | GCTAGC | 1 cut(s) | 902 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 691, 723 |
| BpuEI | CTTGAG | 1 cut(s) | 527 |
| BsaBI | GATNNNNATC | 1 cut(s) | 43 |
| BsaI | GGTCTC | 1 cut(s) | 557 |
| BsaWI | WCCGGW | 1 cut(s) | 427 |
| Bse1I | ACTGG | 2 cut(s) | 553, 996 |
| Bse21I | CCTNAGG | 1 cut(s) | 687 |
| Bse3DI | GCAATG | 3 cut(s) | 114, 801, 1047 |
| Bse8I | GATNNNNATC | 1 cut(s) | 43 |
| BseBI | CCWGG | 2 cut(s) | 227, 786 |
| BseGI | GGATG | 4 cut(s) | 14, 80, 925, 1051 |
| BseJI | GATNNNNATC | 1 cut(s) | 43 |
| BseMI | GCAATG | 3 cut(s) | 114, 801, 1047 |
| BseMII | CTCAG | 3 cut(s) | 678, 687, 1106 |
| BseNI | ACTGG | 2 cut(s) | 553, 996 |
| BseRI | GAGGAG | 2 cut(s) | 704, 1042 |
| BseSI | GKGCMC | 1 cut(s) | 9 |
| BseXI | GCAGC | 5 cut(s) | 85, 221, 994, 1016, 1022 |
| BsgI | GTGCAG | 1 cut(s) | 1023 |
| BshNI | GGYRCC | 2 cut(s) | 258, 542 |
| BsiHKCI | CYCGRG | 1 cut(s) | 606 |
| BsiSI | CCGG | 1 cut(s) | 428 |
| BslFI | GGGAC | 1 cut(s) | 324 |
| BsmAI | GTCTC | 4 cut(s) | 368, 557, 807, 1095 |
| BsmFI | GGGAC | 1 cut(s) | 324 |
| BsmI | GAATGC | 1 cut(s) | 806 |
| Bso31I | GGTCTC | 1 cut(s) | 557 |
| BsoBI | CYCGRG | 1 cut(s) | 606 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp1407I | TGTACA | 1 cut(s) | 77 |
| Bsp143I | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| BspACI | CCGC | 5 cut(s) | 347, 488, 540, 647, 1056 |
| BspCNI | CTCAG | 3 cut(s) | 679, 688, 1105 |
| BspLI | GGNNCC | 3 cut(s) | 260, 426, 544 |
| BspMAI | CTGCAG | 2 cut(s) | 103, 1012 |
| BspOI | GCTAGC | 1 cut(s) | 902 |
| BspPI | GGATC | 3 cut(s) | 293, 338, 392 |
| BspT107I | GGYRCC | 2 cut(s) | 258, 542 |
| BspTNI | GGTCTC | 1 cut(s) | 557 |
| BsrDI | GCAATG | 3 cut(s) | 114, 801, 1047 |
| BsrGI | TGTACA | 1 cut(s) | 77 |
| BsrI | ACTGG | 2 cut(s) | 553, 996 |
| BssMI | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| Bst2UI | CCWGG | 2 cut(s) | 227, 786 |
| Bst4CI | ACNGT | 3 cut(s) | 160, 664, 821 |
| Bst6I | CTCTTC | 3 cut(s) | 1019, 1073, 1084 |
| BstAUI | TGTACA | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 1 cut(s) | 900 |
| BstDEI | CTNAG | 3 cut(s) | 687, 696, 1092 |
| BstF5I | GGATG | 4 cut(s) | 14, 80, 925, 1051 |
| BstKTI | GATC | 9 cut(s) | 41, 288, 333, 400, 445, 499, 517, 577, 886 |
| BstMAI | GTCTC | 4 cut(s) | 368, 557, 807, 1095 |
| BstMBI | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 104, 119, 207, 1010 |
| BstNI | CCWGG | 2 cut(s) | 227, 786 |
| BstNSI | RCATGY | 1 cut(s) | 84 |
| BstSCI | CCNGG | 2 cut(s) | 225, 784 |
| BstSFI | CTRYAG | 2 cut(s) | 99, 1008 |
| BstSLI | GKGCMC | 1 cut(s) | 9 |
| BstV1I | GCAGC | 5 cut(s) | 85, 221, 994, 1016, 1022 |
| BstX2I | RGATCY | 2 cut(s) | 285, 397 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 991 |
| BstYI | RGATCY | 2 cut(s) | 285, 397 |
| Bsu36I | CCTNAGG | 1 cut(s) | 687 |
| BtsCI | GGATG | 4 cut(s) | 14, 80, 925, 1051 |
| BtsI | GCAGTG | 1 cut(s) | 948 |
| BtsIMutI | CAGTG | 3 cut(s) | 31, 546, 948 |
| Cac8I | GCNNGC | 1 cut(s) | 900 |
| Csp6I | GTAC | 3 cut(s) | 78, 543, 621 |
| CviAII | CATG | 5 cut(s) | 19, 81, 271, 299, 1014 |
| CviQI | GTAC | 3 cut(s) | 78, 543, 621 |
| DdeI | CTNAG | 3 cut(s) | 687, 696, 1092 |
| DpnI | GATC | 9 cut(s) | 40, 287, 332, 399, 444, 498, 516, 576, 885 |
| DpnII | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 821 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 821 |
| Eam1104I | CTCTTC | 3 cut(s) | 1019, 1073, 1084 |
| EarI | CTCTTC | 3 cut(s) | 1019, 1073, 1084 |
| Eco31I | GGTCTC | 1 cut(s) | 557 |
| Eco57I | CTGAAG | 2 cut(s) | 174, 873 |
| Eco81I | CCTNAGG | 1 cut(s) | 687 |
| Eco88I | CYCGRG | 1 cut(s) | 606 |
| EcoRII | CCWGG | 2 cut(s) | 225, 784 |
| FaeI | CATG | 5 cut(s) | 22, 84, 274, 302, 1017 |
| FaqI | GGGAC | 1 cut(s) | 324 |
| FatI | CATG | 5 cut(s) | 18, 80, 270, 298, 1013 |
| FauNDI | CATATG | 1 cut(s) | 458 |
| FbaI | TGATCA | 2 cut(s) | 442, 496 |
| Fnu4HI | GCNGC | 8 cut(s) | 99, 235, 347, 489, 648, 1005, 1008, 1011 |
| FokI | GGATG | 3 cut(s) | 87, 932, 1058 |
| Fsp4HI | GCNGC | 8 cut(s) | 99, 235, 347, 489, 648, 1005, 1008, 1011 |
| FspBI | CTAG | 5 cut(s) | 380, 395, 791, 801, 899 |
| GluI | GCNGC | 8 cut(s) | 99, 235, 347, 489, 648, 1005, 1008, 1011 |
| HapII | CCGG | 1 cut(s) | 428 |
| Hin1II | CATG | 5 cut(s) | 22, 84, 274, 302, 1017 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HindIII | AAGCTT | 1 cut(s) | 640 |
| HinfI | GANTC | 3 cut(s) | 219, 602, 779 |
| HpaII | CCGG | 1 cut(s) | 428 |
| HphI | GGTGA | 5 cut(s) | 547, 584, 611, 774, 1094 |
| Hpy166II | GTNNAC | 3 cut(s) | 29, 223, 1102 |
| Hpy188I | TCNGA | 6 cut(s) | 146, 335, 447, 566, 812, 847 |
| Hpy188III | TCNNGA | 5 cut(s) | 72, 153, 401, 500, 606 |
| Hpy8I | GTNNAC | 3 cut(s) | 29, 223, 1102 |
| HpyAV | CCTTC | 1 cut(s) | 49 |
| HpyCH4III | ACNGT | 3 cut(s) | 160, 664, 821 |
| HpyCH4V | TGCA | 5 cut(s) | 101, 237, 1004, 1010, 1040 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 104, 119, 207, 1010 |
| HpyF3I | CTNAG | 3 cut(s) | 687, 696, 1092 |
| Hsp92II | CATG | 5 cut(s) | 22, 84, 274, 302, 1017 |
| KpnI | GGTACC | 1 cut(s) | 546 |
| Ksp22I | TGATCA | 2 cut(s) | 442, 496 |
| Kzo9I | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| Lsp1109I | GCAGC | 5 cut(s) | 85, 221, 994, 1016, 1022 |
| MaeI | CTAG | 5 cut(s) | 380, 395, 791, 801, 899 |
| MaeIII | GTNAC | 1 cut(s) | 856 |
| MalI | GATC | 9 cut(s) | 40, 287, 332, 399, 444, 498, 516, 576, 885 |
| MboI | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| MflI | RGATCY | 2 cut(s) | 285, 397 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MluCI | AATT | 7 cut(s) | 181, 251, 364, 526, 679, 887, 948 |
| MlyI | GAGTC | 1 cut(s) | 228 |
| MmeI | TCCRAC | 1 cut(s) | 396 |
| MseI | TTAA | 2 cut(s) | 453, 1119 |
| MspA1I | CMGCKG | 2 cut(s) | 540, 1007 |
| MspI | CCGG | 1 cut(s) | 428 |
| MspR9I | CCNGG | 2 cut(s) | 227, 786 |
| Mva1269I | GAATGC | 1 cut(s) | 806 |
| MvaI | CCWGG | 2 cut(s) | 227, 786 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 104, 119, 207, 1010 |
| NdeI | CATATG | 1 cut(s) | 458 |
| NdeII | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| NheI | GCTAGC | 1 cut(s) | 898 |
| NlaIII | CATG | 5 cut(s) | 22, 84, 274, 302, 1017 |
| NlaIV | GGNNCC | 3 cut(s) | 260, 426, 544 |
| NspI | RCATGY | 1 cut(s) | 84 |
| PaeR7I | CTCGAG | 1 cut(s) | 606 |
| PciI | ACATGT | 1 cut(s) | 80 |
| PctI | GAATGC | 1 cut(s) | 806 |
| PfeI | GAWTC | 2 cut(s) | 602, 779 |
| PkrI | GCNGC | 8 cut(s) | 100, 236, 348, 490, 649, 1006, 1009, 1012 |
| PleI | GAGTC | 1 cut(s) | 227 |
| PpsI | GAGTC | 1 cut(s) | 227 |
| PscI | ACATGT | 1 cut(s) | 80 |
| Psp6I | CCWGG | 2 cut(s) | 225, 784 |
| PspGI | CCWGG | 2 cut(s) | 225, 784 |
| PspN4I | GGNNCC | 3 cut(s) | 260, 426, 544 |
| PstI | CTGCAG | 2 cut(s) | 103, 1012 |
| PsuI | RGATCY | 2 cut(s) | 285, 397 |
| PvuII | CAGCTG | 1 cut(s) | 1007 |
| RsaI | GTAC | 3 cut(s) | 79, 544, 622 |
| RsaNI | GTAC | 3 cut(s) | 78, 543, 621 |
| SaqAI | TTAA | 2 cut(s) | 453, 1119 |
| SatI | GCNGC | 8 cut(s) | 99, 235, 347, 489, 648, 1005, 1008, 1011 |
| Sau3AI | GATC | 9 cut(s) | 38, 285, 330, 397, 442, 496, 514, 574, 883 |
| SchI | GAGTC | 1 cut(s) | 228 |
| ScrFI | CCNGG | 2 cut(s) | 227, 786 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SfcI | CTRYAG | 2 cut(s) | 99, 1008 |
| Sfr274I | CTCGAG | 1 cut(s) | 606 |
| SlaI | CTCGAG | 1 cut(s) | 606 |
| SmlI | CTYRAG | 2 cut(s) | 506, 606 |
| SmoI | CTYRAG | 2 cut(s) | 506, 606 |
| Sse9I | AATT | 7 cut(s) | 181, 251, 364, 526, 679, 887, 948 |
| SsiI | CCGC | 5 cut(s) | 347, 488, 540, 647, 1056 |
| SspMI | CTAG | 5 cut(s) | 380, 395, 791, 801, 899 |
| StyD4I | CCNGG | 2 cut(s) | 225, 784 |
| TaaI | ACNGT | 3 cut(s) | 160, 664, 821 |
| TaqI | TCGA | 1 cut(s) | 607 |
| TasI | AATT | 7 cut(s) | 181, 251, 364, 526, 679, 887, 948 |
| TatI | WGTACW | 1 cut(s) | 77 |
| TauI | GCSGC | 3 cut(s) | 349, 491, 650 |
| TfiI | GAWTC | 2 cut(s) | 602, 779 |
| Tru1I | TTAA | 2 cut(s) | 453, 1119 |
| Tru9I | TTAA | 2 cut(s) | 453, 1119 |
| TscAI | CASTG | 3 cut(s) | 31, 553, 948 |
| TseI | GCWGC | 5 cut(s) | 98, 234, 1004, 1007, 1010 |
| TspDTI | ATGAA | 3 cut(s) | 743, 756, 789 |
| TspRI | CASTG | 3 cut(s) | 31, 553, 948 |
| XapI | RAATTY | 1 cut(s) | 251 |
| XceI | RCATGY | 1 cut(s) | 84 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 991 |
| XhoI | CTCGAG | 1 cut(s) | 606 |
| XspI | CTAG | 5 cut(s) | 380, 395, 791, 801, 899 |