disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 79 - 253 | 2e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 343 - 416 | 2.4e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 474 - 715 | 2.5e-33 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 587 - 715 | 2.1e-37 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 850 - 1025 | 9.6e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 1122 - 1236 | 3.4e-12 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1175 - 1234 | 1.1e-06 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1937 |
| AatII | GACGTC | 1 cut(s) | 420 |
| Acc16I | TGCGCA | 1 cut(s) | 3236 |
| Acc36I | ACCTGC | 1 cut(s) | 3028 |
| AccB1I | GGYRCC | 1 cut(s) | 64 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 576, 2407 |
| AccBSI | CCGCTC | 2 cut(s) | 2101, 2689 |
| AccI | GTMKAC | 3 cut(s) | 348, 2848, 3214 |
| AccII | CGCG | 1 cut(s) | 688 |
| AclWI | GGATC | 3 cut(s) | 108, 631, 3463 |
| AcoI | YGGCCR | 2 cut(s) | 297, 336 |
| AcuI | CTGAAG | 4 cut(s) | 1287, 1565, 2960, 3210 |
| AcyI | GRCGYC | 2 cut(s) | 65, 417 |
| AdeI | CACNNNGTG | 1 cut(s) | 1109 |
| AfaI | GTAC | 4 cut(s) | 543, 886, 1534, 1606 |
| AfeI | AGCGCT | 1 cut(s) | 2241 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 162, 576, 2102, 2407, 3730 |
| AflII | CTTAAG | 3 cut(s) | 1610, 1978, 2129 |
| AflIII | ACRYGT | 1 cut(s) | 1318 |
| AhlI | ACTAGT | 1 cut(s) | 130 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 201, 233 |
| Alw21I | GWGCWC | 4 cut(s) | 787, 1169, 1239, 3429 |
| Alw26I | GTCTC | 6 cut(s) | 1050, 1645, 2339, 3320, 3513, 3572 |
| Alw44I | GTGCAC | 1 cut(s) | 1235 |
| AlwI | GGATC | 3 cut(s) | 108, 631, 3463 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2842 |
| Ama87I | CYCGRG | 2 cut(s) | 1326, 2336 |
| Aor51HI | AGCGCT | 1 cut(s) | 2241 |
| AoxI | GGCC | 8 cut(s) | 297, 316, 336, 1948, 2872, 2889, 3494, 3764 |
| ApaLI | GTGCAC | 1 cut(s) | 1235 |
| ApeKI | GCWGC | 4 cut(s) | 1816, 2952, 3300, 3750 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3152, 3184 |
| AseI | ATTAAT | 4 cut(s) | 842, 1799, 2036, 3461 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 706, 1353, 1479 |
| AspLEI | GCGC | 3 cut(s) | 67, 2242, 3237 |
| AspS9I | GGNCC | 4 cut(s) | 726, 2873, 2889, 3619 |
| AsuHPI | GGTGA | 7 cut(s) | 984, 1415, 1805, 2282, 2956, 3307, 3676 |
| AsuII | TTCGAA | 1 cut(s) | 1714 |
| AsuNHI | GCTAGC | 1 cut(s) | 3163 |
| AvaI | CYCGRG | 2 cut(s) | 1326, 2336 |
| AvaII | GGWCC | 2 cut(s) | 726, 3619 |
| BaeGI | GKGCMC | 3 cut(s) | 766, 1239, 3181 |
| BalI | TGGCCA | 2 cut(s) | 299, 338 |
| BanI | GGYRCC | 1 cut(s) | 64 |
| BanII | GRGCYC | 2 cut(s) | 1169, 3429 |
| BauI | CACGAG | 1 cut(s) | 2897 |
| BbsI | GAAGAC | 2 cut(s) | 47, 2409 |
| Bbv12I | GWGCWC | 4 cut(s) | 787, 1169, 1239, 3429 |
| BbvCI | CCTCAGC | 1 cut(s) | 2654 |
| BbvI | GCAGC | 4 cut(s) | 1828, 2964, 3312, 3762 |
| BccI | CCATC | 5 cut(s) | 165, 583, 737, 1003, 1072 |
| BceAI | ACGGC | 1 cut(s) | 2985 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 743, 764, 777, 798, 1022, 1056 |
| BciVI | GTATCC | 1 cut(s) | 412 |
| BclI | TGATCA | 1 cut(s) | 1641 |
| BcoDI | GTCTC | 6 cut(s) | 1050, 1645, 2339, 3320, 3513, 3572 |
| BcuI | ACTAGT | 1 cut(s) | 130 |
| BfaI | CTAG | 9 cut(s) | 131, 1371, 1943, 2331, 2675, 2721, 2726, 3164, 3260 |
| BfmI | CTRYAG | 1 cut(s) | 1560 |
| BfoI | RGCGCY | 2 cut(s) | 68, 2243 |
| BfrI | CTTAAG | 3 cut(s) | 1610, 1978, 2129 |
| BfuAI | ACCTGC | 1 cut(s) | 3028 |
| BfuI | GTATCC | 1 cut(s) | 412 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2671 |
| BisI | GCNGC | 9 cut(s) | 1700, 1817, 2096, 2099, 2516, 2953, 3301, 3751, 3754 |
| BlsI | GCNGC | 9 cut(s) | 1701, 1818, 2097, 2100, 2517, 2954, 3302, 3752, 3755 |
| BmcAI | AGTACT | 1 cut(s) | 886 |
| Bme18I | GGWCC | 2 cut(s) | 726, 3619 |
| BmeT110I | CYCGRG | 2 cut(s) | 1326, 2336 |
| BmgT120I | GGNCC | 4 cut(s) | 726, 2873, 2889, 3619 |
| BmiI | GGNNCC | 1 cut(s) | 66 |
| BmrI | ACTGGG | 1 cut(s) | 2109 |
| BmtI | GCTAGC | 1 cut(s) | 3167 |
| BmuI | ACTGGG | 1 cut(s) | 2109 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2794 |
| BpiI | GAAGAC | 2 cut(s) | 47, 2409 |
| BpmI | CTGGAG | 2 cut(s) | 639, 2819 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2654, 3498 |
| Bpu14I | TTCGAA | 1 cut(s) | 1714 |
| BpuEI | CTTGAG | 9 cut(s) | 89, 788, 873, 1068, 1531, 1985, 2714, 3344, 3488 |
| BsaHI | GRCGYC | 2 cut(s) | 65, 417 |
| BsaJI | CCNNGG | 3 cut(s) | 93, 319, 1427 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3684, 3714 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 162, 576, 2102, 2407, 3730 |
| Bse1I | ACTGG | 3 cut(s) | 1350, 1484, 2115 |
| Bse3DI | GCAATG | 5 cut(s) | 1013, 1144, 2578, 2866, 3634 |
| BseDI | CCNNGG | 3 cut(s) | 93, 319, 1427 |
| BseGI | GGATG | 9 cut(s) | 89, 444, 493, 721, 1083, 2025, 2078, 3608, 3718 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 162, 576, 2102, 2407, 3730 |
| BseMI | GCAATG | 5 cut(s) | 1013, 1144, 2578, 2866, 3634 |
| BseMII | CTCAG | 9 cut(s) | 173, 684, 780, 956, 1640, 2160, 2645, 2834, 3406 |
| BseNI | ACTGG | 3 cut(s) | 1350, 1484, 2115 |
| BseRI | GAGGAG | 4 cut(s) | 3128, 3131, 3215, 3437 |
| BseSI | GKGCMC | 3 cut(s) | 766, 1239, 3181 |
| BseXI | GCAGC | 4 cut(s) | 1828, 2964, 3312, 3762 |
| BsgI | GTGCAG | 1 cut(s) | 2809 |
| Bsh1236I | CGCG | 1 cut(s) | 688 |
| BshFI | GGCC | 8 cut(s) | 299, 318, 338, 1950, 2874, 2891, 3496, 3766 |
| BshNI | GGYRCC | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 4 cut(s) | 787, 1169, 1239, 3429 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1326, 2336 |
| BslFI | GGGAC | 3 cut(s) | 188, 2944, 3024 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 162, 576, 2102, 2407, 3730 |
| BsmAI | GTCTC | 6 cut(s) | 1050, 1645, 2339, 3320, 3513, 3572 |
| BsmBI | CGTCTC | 1 cut(s) | 3320 |
| BsmFI | GGGAC | 3 cut(s) | 188, 2944, 3024 |
| BsmI | GAATGC | 1 cut(s) | 1220 |
| BsnI | GGCC | 8 cut(s) | 299, 318, 338, 1950, 2874, 2891, 3496, 3766 |
| BsoBI | CYCGRG | 2 cut(s) | 1326, 2336 |
| Bsp119I | TTCGAA | 1 cut(s) | 1714 |
| Bsp1286I | GDGCHC | 6 cut(s) | 766, 787, 1169, 1239, 3181, 3429 |
| Bsp143I | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| BspANI | GGCC | 8 cut(s) | 299, 318, 338, 1950, 2874, 2891, 3496, 3766 |
| BspCNI | CTCAG | 9 cut(s) | 172, 683, 781, 957, 1641, 2161, 2646, 2835, 3405 |
| BspFNI | CGCG | 1 cut(s) | 688 |
| BspHI | TCATGA | 2 cut(s) | 732, 3792 |
| BspLI | GGNNCC | 1 cut(s) | 66 |
| BspMI | ACCTGC | 1 cut(s) | 3028 |
| BspOI | GCTAGC | 1 cut(s) | 3167 |
| BspPI | GGATC | 3 cut(s) | 108, 631, 3463 |
| BspQI | GCTCTTC | 1 cut(s) | 3030 |
| BspT104I | TTCGAA | 1 cut(s) | 1714 |
| BspT107I | GGYRCC | 1 cut(s) | 64 |
| BspTI | CTTAAG | 3 cut(s) | 1610, 1978, 2129 |
| BsrBI | CCGCTC | 2 cut(s) | 2101, 2689 |
| BsrDI | GCAATG | 5 cut(s) | 1013, 1144, 2578, 2866, 3634 |
| BsrI | ACTGG | 3 cut(s) | 1350, 1484, 2115 |
| BssECI | CCNNGG | 3 cut(s) | 93, 319, 1427 |
| BssMI | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| BssNAI | GTATAC | 2 cut(s) | 349, 2849 |
| BssNI | GRCGYC | 2 cut(s) | 65, 417 |
| BssSI | CACGAG | 1 cut(s) | 2897 |
| BssT1I | CCWWGG | 1 cut(s) | 93 |
| Bst1107I | GTATAC | 2 cut(s) | 349, 2849 |
| Bst2BI | CACGAG | 1 cut(s) | 2897 |
| Bst4CI | ACNGT | 4 cut(s) | 914, 1403, 1431, 3141 |
| Bst6I | CTCTTC | 7 cut(s) | 126, 475, 507, 1758, 2979, 3030, 3051 |
| BstACI | GRCGYC | 2 cut(s) | 65, 417 |
| BstAFI | CTTAAG | 3 cut(s) | 1610, 1978, 2129 |
| BstBI | TTCGAA | 1 cut(s) | 1714 |
| BstC8I | GCNNGC | 6 cut(s) | 1568, 1774, 2292, 2804, 3165, 3305 |
| BstDSI | CCRYGG | 1 cut(s) | 1427 |
| BstF5I | GGATG | 9 cut(s) | 89, 444, 493, 721, 1083, 2025, 2078, 3608, 3718 |
| BstFNI | CGCG | 1 cut(s) | 688 |
| BstH2I | RGCGCY | 2 cut(s) | 68, 2243 |
| BstHHI | GCGC | 3 cut(s) | 67, 2242, 3237 |
| BstKTI | GATC | 9 cut(s) | 84, 103, 626, 1231, 1243, 1644, 2188, 2275, 3458 |
| BstMAI | GTCTC | 6 cut(s) | 1050, 1645, 2339, 3320, 3513, 3572 |
| BstMBI | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 296, 685, 1847, 1884, 2671, 2680, 3747 |
| BstNSI | RCATGY | 2 cut(s) | 1322, 2959 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2794 |
| BstSFI | CTRYAG | 1 cut(s) | 1560 |
| BstSLI | GKGCMC | 3 cut(s) | 766, 1239, 3181 |
| BstUI | CGCG | 1 cut(s) | 688 |
| BstV1I | GCAGC | 4 cut(s) | 1828, 2964, 3312, 3762 |
| BstV2I | GAAGAC | 2 cut(s) | 47, 2409 |
| BstX2I | RGATCY | 2 cut(s) | 100, 623 |
| BstYI | RGATCY | 2 cut(s) | 100, 623 |
| BstZ17I | GTATAC | 2 cut(s) | 349, 2849 |
| BsuI | GTATCC | 1 cut(s) | 412 |
| BsuRI | GGCC | 8 cut(s) | 299, 318, 338, 1950, 2874, 2891, 3496, 3766 |
| BtgI | CCRYGG | 1 cut(s) | 1427 |
| BtsCI | GGATG | 9 cut(s) | 89, 444, 493, 721, 1083, 2025, 2078, 3608, 3718 |
| BtsI | GCAGTG | 2 cut(s) | 787, 2461 |
| BtsIMutI | CAGTG | 4 cut(s) | 787, 1343, 1740, 2461 |
| BveI | ACCTGC | 1 cut(s) | 3028 |
| Cac8I | GCNNGC | 6 cut(s) | 1568, 1774, 2292, 2804, 3165, 3305 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2842 |
| CciI | TCATGA | 2 cut(s) | 732, 3792 |
| CfoI | GCGC | 3 cut(s) | 67, 2242, 3237 |
| Cfr13I | GGNCC | 4 cut(s) | 726, 2873, 2889, 3619 |
| CseI | GACGC | 2 cut(s) | 3156, 3337 |
| Csp6I | GTAC | 4 cut(s) | 542, 885, 1533, 1605 |
| CviQI | GTAC | 4 cut(s) | 542, 885, 1533, 1605 |
| DinI | GGCGCC | 1 cut(s) | 66 |
| DpnI | GATC | 9 cut(s) | 83, 102, 625, 1230, 1242, 1643, 2187, 2274, 3457 |
| DpnII | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| DraI | TTTAAA | 1 cut(s) | 907 |
| DraIII | CACNNNGTG | 1 cut(s) | 1109 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1937 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1937 |
| EaeI | YGGCCR | 2 cut(s) | 297, 336 |
| Eam1104I | CTCTTC | 7 cut(s) | 126, 475, 507, 1758, 2979, 3030, 3051 |
| EarI | CTCTTC | 7 cut(s) | 126, 475, 507, 1758, 2979, 3030, 3051 |
| Ecl136II | GAGCTC | 2 cut(s) | 1167, 3427 |
| Eco130I | CCWWGG | 1 cut(s) | 93 |
| Eco147I | AGGCCT | 2 cut(s) | 318, 1950 |
| Eco24I | GRGCYC | 2 cut(s) | 1169, 3429 |
| Eco32I | GATATC | 1 cut(s) | 3790 |
| Eco47I | GGWCC | 2 cut(s) | 726, 3619 |
| Eco47III | AGCGCT | 1 cut(s) | 2241 |
| Eco53kI | GAGCTC | 2 cut(s) | 1167, 3427 |
| Eco57I | CTGAAG | 4 cut(s) | 1287, 1565, 2960, 3210 |
| Eco88I | CYCGRG | 2 cut(s) | 1326, 2336 |
| EcoICRI | GAGCTC | 2 cut(s) | 1167, 3427 |
| EcoRV | GATATC | 1 cut(s) | 3790 |
| EcoT14I | CCWWGG | 1 cut(s) | 93 |
| EcoT22I | ATGCAT | 3 cut(s) | 91, 1227, 3468 |
| EcoT38I | GRGCYC | 2 cut(s) | 1169, 3429 |
| EgeI | GGCGCC | 1 cut(s) | 66 |
| EheI | GGCGCC | 1 cut(s) | 66 |
| ErhI | CCWWGG | 1 cut(s) | 93 |
| Esp3I | CGTCTC | 1 cut(s) | 3320 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 105, 137, 270, 302 |
| FaqI | GGGAC | 3 cut(s) | 188, 2944, 3024 |
| FauI | CCCGC | 1 cut(s) | 2694 |
| FbaI | TGATCA | 1 cut(s) | 1641 |
| FblI | GTMKAC | 3 cut(s) | 348, 2848, 3214 |
| Fnu4HI | GCNGC | 9 cut(s) | 1700, 1817, 2096, 2099, 2516, 2953, 3301, 3751, 3754 |
| FokI | GGATG | 9 cut(s) | 76, 451, 500, 728, 1090, 2032, 2085, 3595, 3705 |
| FriOI | GRGCYC | 2 cut(s) | 1169, 3429 |
| Fsp4HI | GCNGC | 9 cut(s) | 1700, 1817, 2096, 2099, 2516, 2953, 3301, 3751, 3754 |
| FspBI | CTAG | 9 cut(s) | 131, 1371, 1943, 2331, 2675, 2721, 2726, 3164, 3260 |
| FspI | TGCGCA | 1 cut(s) | 3236 |
| GlaI | GCGC | 3 cut(s) | 66, 2241, 3236 |
| GluI | GCNGC | 9 cut(s) | 1700, 1817, 2096, 2099, 2516, 2953, 3301, 3751, 3754 |
| GsuI | CTGGAG | 2 cut(s) | 639, 2819 |
| HaeII | RGCGCY | 2 cut(s) | 68, 2243 |
| HaeIII | GGCC | 8 cut(s) | 299, 318, 338, 1950, 2874, 2891, 3496, 3766 |
| HgaI | GACGC | 2 cut(s) | 3156, 3337 |
| HhaI | GCGC | 3 cut(s) | 67, 2242, 3237 |
| Hin1I | GRCGYC | 2 cut(s) | 65, 417 |
| Hin6I | GCGC | 3 cut(s) | 65, 2240, 3235 |
| HinP1I | GCGC | 3 cut(s) | 65, 2240, 3235 |
| HincII | GTYRAC | 3 cut(s) | 1911, 2346, 3562 |
| HindII | GTYRAC | 3 cut(s) | 1911, 2346, 3562 |
| HindIII | AAGCTT | 4 cut(s) | 605, 1437, 1885, 3013 |
| HpaI | GTTAAC | 1 cut(s) | 3562 |
| HphI | GGTGA | 7 cut(s) | 984, 1415, 1805, 2282, 2956, 3307, 3676 |
| Hpy166II | GTNNAC | 9 cut(s) | 349, 1237, 1911, 2194, 2346, 2789, 2849, 3215, 3562 |
| Hpy8I | GTNNAC | 9 cut(s) | 349, 1237, 1911, 2194, 2346, 2789, 2849, 3215, 3562 |
| Hpy99I | CGWCG | 1 cut(s) | 419 |
| HpyCH4III | ACNGT | 4 cut(s) | 914, 1403, 1431, 3141 |
| HpyCH4IV | ACGT | 4 cut(s) | 417, 552, 2015, 2303 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 296, 685, 1847, 1884, 2671, 2680, 3747 |
| HpySE526I | ACGT | 4 cut(s) | 417, 552, 2015, 2303 |
| Hsp92I | GRCGYC | 2 cut(s) | 65, 417 |
| HspAI | GCGC | 3 cut(s) | 65, 2240, 3235 |
| KasI | GGCGCC | 1 cut(s) | 64 |
| Ksp22I | TGATCA | 1 cut(s) | 1641 |
| KspAI | GTTAAC | 1 cut(s) | 3562 |
| Kzo9I | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| LguI | GCTCTTC | 1 cut(s) | 3030 |
| LmnI | GCTCC | 8 cut(s) | 790, 1172, 2125, 2383, 2500, 2688, 2694, 3424 |
| Lsp1109I | GCAGC | 4 cut(s) | 1828, 2964, 3312, 3762 |
| MaeI | CTAG | 9 cut(s) | 131, 1371, 1943, 2331, 2675, 2721, 2726, 3164, 3260 |
| MaeII | ACGT | 4 cut(s) | 417, 552, 2015, 2303 |
| MaeIII | GTNAC | 7 cut(s) | 247, 418, 637, 1193, 1383, 2064, 2796 |
| MalI | GATC | 9 cut(s) | 83, 102, 625, 1230, 1242, 1643, 2187, 2274, 3457 |
| MbiI | CCGCTC | 2 cut(s) | 2101, 2689 |
| MboI | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| MfeI | CAATTG | 4 cut(s) | 801, 1784, 1891, 2937 |
| MflI | RGATCY | 2 cut(s) | 100, 623 |
| MhlI | GDGCHC | 6 cut(s) | 766, 787, 1169, 1239, 3181, 3429 |
| MlsI | TGGCCA | 2 cut(s) | 299, 338 |
| MluNI | TGGCCA | 2 cut(s) | 299, 338 |
| Mly113I | GGCGCC | 1 cut(s) | 65 |
| MlyI | GAGTC | 2 cut(s) | 1455, 2392 |
| MmeI | TCCRAC | 7 cut(s) | 429, 1474, 1950, 1978, 2036, 2388, 3433 |
| Mox20I | TGGCCA | 2 cut(s) | 299, 338 |
| Mph1103I | ATGCAT | 3 cut(s) | 91, 1227, 3468 |
| MroXI | GAANNNNTTC | 3 cut(s) | 706, 1353, 1479 |
| MscI | TGGCCA | 2 cut(s) | 299, 338 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3034 |
| Msp20I | TGGCCA | 2 cut(s) | 299, 338 |
| MspA1I | CMGCKG | 1 cut(s) | 3753 |
| MspCI | CTTAAG | 3 cut(s) | 1610, 1978, 2129 |
| MunI | CAATTG | 4 cut(s) | 801, 1784, 1891, 2937 |
| Mva1269I | GAATGC | 1 cut(s) | 1220 |
| MvnI | CGCG | 1 cut(s) | 688 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 296, 685, 1847, 1884, 2671, 2680, 3747 |
| NarI | GGCGCC | 1 cut(s) | 65 |
| NdeII | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| NheI | GCTAGC | 1 cut(s) | 3163 |
| NlaIV | GGNNCC | 1 cut(s) | 66 |
| NmeAIII | GCCGAG | 1 cut(s) | 2832 |
| NmuCI | GTSAC | 6 cut(s) | 247, 418, 637, 1193, 1383, 2796 |
| NsbI | TGCGCA | 1 cut(s) | 3236 |
| NsiI | ATGCAT | 3 cut(s) | 91, 1227, 3468 |
| NspI | RCATGY | 2 cut(s) | 1322, 2959 |
| NspV | TTCGAA | 1 cut(s) | 1714 |
| PaeR7I | CTCGAG | 1 cut(s) | 2336 |
| PagI | TCATGA | 2 cut(s) | 732, 3792 |
| PceI | AGGCCT | 2 cut(s) | 318, 1950 |
| PciI | ACATGT | 1 cut(s) | 1318 |
| PciSI | GCTCTTC | 1 cut(s) | 3030 |
| PctI | GAATGC | 1 cut(s) | 1220 |
| PdmI | GAANNNNTTC | 3 cut(s) | 706, 1353, 1479 |
| PflFI | GACNNNGTC | 2 cut(s) | 2302, 3331 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 576, 2407 |
| PkrI | GCNGC | 9 cut(s) | 1701, 1818, 2097, 2100, 2517, 2954, 3302, 3752, 3755 |
| PleI | GAGTC | 2 cut(s) | 1454, 2391 |
| PluTI | GGCGCC | 1 cut(s) | 68 |
| PpsI | GAGTC | 2 cut(s) | 1454, 2391 |
| PscI | ACATGT | 1 cut(s) | 1318 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2794 |
| PshBI | ATTAAT | 4 cut(s) | 842, 1799, 2036, 3461 |
| Psp124BI | GAGCTC | 2 cut(s) | 1169, 3429 |
| PspN4I | GGNNCC | 1 cut(s) | 66 |
| PspPI | GGNCC | 4 cut(s) | 726, 2873, 2889, 3619 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2842 |
| PsuI | RGATCY | 2 cut(s) | 100, 623 |
| PsyI | GACNNNGTC | 2 cut(s) | 2302, 3331 |
| RsaI | GTAC | 4 cut(s) | 543, 886, 1534, 1606 |
| RsaNI | GTAC | 4 cut(s) | 542, 885, 1533, 1605 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3034 |
| SacI | GAGCTC | 2 cut(s) | 1169, 3429 |
| SapI | GCTCTTC | 1 cut(s) | 3030 |
| SatI | GCNGC | 9 cut(s) | 1700, 1817, 2096, 2099, 2516, 2953, 3301, 3751, 3754 |
| Sau3AI | GATC | 9 cut(s) | 81, 100, 623, 1228, 1240, 1641, 2185, 2272, 3455 |
| Sau96I | GGNCC | 4 cut(s) | 726, 2873, 2889, 3619 |
| ScaI | AGTACT | 1 cut(s) | 886 |
| SchI | GAGTC | 2 cut(s) | 1455, 2392 |
| SduI | GDGCHC | 6 cut(s) | 766, 787, 1169, 1239, 3181, 3429 |
| SfcI | CTRYAG | 1 cut(s) | 1560 |
| SfoI | GGCGCC | 1 cut(s) | 66 |
| Sfr274I | CTCGAG | 1 cut(s) | 2336 |
| SfuI | TTCGAA | 1 cut(s) | 1714 |
| SinI | GGWCC | 2 cut(s) | 726, 3619 |
| SlaI | CTCGAG | 1 cut(s) | 2336 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3034 |
| SpeI | ACTAGT | 1 cut(s) | 130 |
| SseBI | AGGCCT | 2 cut(s) | 318, 1950 |
| SspDI | GGCGCC | 1 cut(s) | 64 |
| SspI | AATATT | 2 cut(s) | 1145, 1471 |
| SspMI | CTAG | 9 cut(s) | 131, 1371, 1943, 2331, 2675, 2721, 2726, 3164, 3260 |
| SstI | GAGCTC | 2 cut(s) | 1169, 3429 |
| StuI | AGGCCT | 2 cut(s) | 318, 1950 |
| StyI | CCWWGG | 1 cut(s) | 93 |
| TaaI | ACNGT | 4 cut(s) | 914, 1403, 1431, 3141 |
| TaiI | ACGT | 4 cut(s) | 420, 555, 2018, 2306 |
| TaqII | GACCGA | 1 cut(s) | 2093 |
| TatI | WGTACW | 1 cut(s) | 884 |
| TauI | GCSGC | 5 cut(s) | 1702, 2098, 2101, 2518, 3756 |
| TscAI | CASTG | 4 cut(s) | 787, 1350, 1740, 2461 |
| TseFI | GTSAC | 6 cut(s) | 247, 418, 637, 1193, 1383, 2796 |
| TseI | GCWGC | 4 cut(s) | 1816, 2952, 3300, 3750 |
| Tsp45I | GTSAC | 6 cut(s) | 247, 418, 637, 1193, 1383, 2796 |
| TspGWI | ACGGA | 4 cut(s) | 1085, 2138, 3632, 3692 |
| TspRI | CASTG | 4 cut(s) | 787, 1350, 1740, 2461 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2302, 3331 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 576, 2407 |
| Vha464I | CTTAAG | 3 cut(s) | 1610, 1978, 2129 |
| VneI | GTGCAC | 1 cut(s) | 1235 |
| VpaK11BI | GGWCC | 2 cut(s) | 726, 3619 |
| VspI | ATTAAT | 4 cut(s) | 842, 1799, 2036, 3461 |
| XbaI | TCTAGA | 1 cut(s) | 2725 |
| XceI | RCATGY | 2 cut(s) | 1322, 2959 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 307, 2883, 3081 |
| XhoI | CTCGAG | 1 cut(s) | 2336 |
| XmiI | GTMKAC | 3 cut(s) | 348, 2848, 3214 |
| XmnI | GAANNNNTTC | 3 cut(s) | 706, 1353, 1479 |
| XspI | CTAG | 9 cut(s) | 131, 1371, 1943, 2331, 2675, 2721, 2726, 3164, 3260 |
| ZraI | GACGTC | 1 cut(s) | 418 |
| ZrmI | AGTACT | 1 cut(s) | 886 |
| Zsp2I | ATGCAT | 3 cut(s) | 91, 1227, 3468 |