pycom05g21980

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
24523701 .. 24525950
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g21980.1

Sequence Viewer

Length: 2250 bp
ATGAAGTTTCCTCTTGGGGTGGGGCAATGGACTCACCTCCGGACACTGCCTCACTTTTCTGTGGGAAAGGAAAGAGGTTGTGGAATTGAGGAGTTGGCTAGCTTGAACCAGTTGAAGGGTGAATTAACTCTCTACAATCTAGAACACGTACGTGATAGAGATAAAGCAAGGAAAGCTAAATTGGAGGATAAGAAAAACCTATGCCATTTGAGATTTGTATGGACAGAAGATATGTCAACAACCAACAACAATGATGAGGATGTACTAGAAGGCCTCCAACCACATTCCGAGTTCGAAGGCCTCGTGATTGAACATTTCAGGGGTGCTAAATTTCCGTCTTGGATGATGAGTAGGTCGTTACCGCTCAATAATTTGAAGAAGATTCATTTGCGCAGGTGCAACAAATGTGAAGGAGTACCAACACTCGGTCATCTACCTAATCTTCAACACCTTCGGATTGATAGAATGGCTGAGCTAAAATGTATCGGAGCTGACTTTTATGGTTACAATCTTGTTTACAATGCAACAAGGTCACGTAAAGAGACGACAACTTTGTTTCCAGCACTGAAACAATTATCCATTAGTGAGTGCAGGGAGCTTATTGAATGGATGGAAGCACCAAAATTGTCAACTGAAGTGTTTCCTTGCCTTGAGGAGCTCCATATCTTGAATTGTCCCAAATTGAGAAATGCTCCCAGTCATTTTCCATTGCTCAAGGACTTGTGGATATCTTCTTGTGACGATGTCCAGCCATTAAAAAATATAACCAGCAGACTAACAAGTCTGACTTCCCTCACGATTGATCTTAATAAGAAGATTACTAGTCTGCCAAAAGGGATGTTGGAGAGCAACAAAAATCTCACATCTGTTGAGATATTAAGTTGTGAGAAGTTGACTTGTATTGCTCCCAATGTACTTGGATGTTGCACATCCCTCCAGAAGCTGCATGTCTATGATTGTAAAAAGCTGAGGCGTTTACCTGATGGGATAGACACACTGCCTTTGCTTGAGAAGATGACAATAAGAGAATGCCCTCGCCTAGAGTTCATCCCAATGACACACGGCATGGTTTCTCTCCGCAAACTGCATATTGATTCTTGCGGTGGACTGTCAGGCCTACCAAGTGGGCTAGAATACTGTACATCTCTTCAAGCATTGAGCATAATGGGTTGCGGTAATCTATCAGTCATTCCAGTCACACACGACCTTTCTTCTCTCCGCACATTGAAGATTGGAGATTGTGAAGGATTATCATGCCTACCAAGCGGACTCGAGCATTTCTCCTCTCTACAAGAATTGTCTGTGTGGAATTGTCCAATTGTAACATCAATTCCAATTTCCAACGGCACGCCCTTGACCTCCTTGCAGGTATTGGAAATTGAAAATTGTATGGAATTATCAAGCTTCCCGGCCCTAGAATATTGTCCTTCTCTTTTGAAATTGATGATAAGGAACTGCCCAAAGTTAGCATTCATAAGTGCCTTATCACTTACGAATCCACTACCAAGTAGCAGATCAGAAAACTTCACTAGTACGAGCCTTGACAGTCTTGAGTATTTGTCTATAAGGAGTTGTAGTAATCTGCATTCAATTCCAGATTTAGACAGCTTCACTTCTCTCCGTCAACTGTGGATTCATAACTGTGAAAGATTAGAGATTCGGGTTACTTCACTATGTGTCTCTCTTGAGGAGTTGAAATTAACCAGTTTGCCTAAGCTAGAGAGTATACCAAGTTTAGACAACCTCACATCTCTCTGTATGGTGGCCATTTATGGTTGTCGGAATTTGAAAATTTTCCCAAGGGGGCTTCACTGCCTCACTCGTTTGAAGACTTTGACAATTGGTGGGTTCTCGGAGGAGCTTGATTGCTTCCCTGACTTTCCAATTCTTTCGCGACTTAAAAGATTAACATTGCGTGGGTGGCCTAAGCTCAAGTCTCTGCCTCAACAAATTCAACACTTCACTTCTTTGACGCATTTGTGTATAATGTCTTTTGATGGAGTGGAGGCCCTGCCAGACTGGTTGGGTAACCTTACATATCTGTGGCAGCTGGAGATTGTGAACTGCAAGAATTTGATGTATTTACCTACCGTCAAAGCTATGCAACGCCTTACCAACTTACTAAATCTGGAAATTCGTTGTTGCCCCTTTCTTGGAGAAAGGTGCACTGCAGAGACAGGCTCGGAATGGCATAAGGTTTCTCACATTCTTACTTTCAGAGGTACATTATTTTTTATCTCCGTGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

750

Amino Acids

84.63

Weight (kDa)

8.06

Isoelectric Point (pI)

50.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 2 - 198 3.3e-08 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 29 - 156 3.9e-38 R13L1/DRL21 LRRs
LRR_14 PF23598 293 - 481 5.5e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 512 - 614 3.8e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 573 - 716 4.7e-09 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 651 - 707 3.4e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 384
AasI GACNNNNNNGTC 1 cut(s) 780
Acc16I TGCGCA 1 cut(s) 392
Acc36I ACCTGC 2 cut(s) 384, 1357
AccBSI CCGCTC 1 cut(s) 364
AccI GTMKAC 1 cut(s) 1726
AccII CGCG 1 cut(s) 1894
AccIII TCCGGA 1 cut(s) 39
AciI CCGC 6 cut(s) 362, 1078, 1101, 1173, 1219, 1266
AcoI YGGCCR 1 cut(s) 1764
AcsI RAATTY 6 cut(s) 329, 1783, 1791, 1950, 2071, 2133
AcuI CTGAAG 1 cut(s) 654
AdeI CACNNNGTG 1 cut(s) 1676
AfaI GTAC 7 cut(s) 150, 264, 417, 915, 1141, 1534, 2224
AfiI CCNNNNNNNGG 3 cut(s) 115, 425, 2153
AflIII ACRYGT 1 cut(s) 145
AhlI ACTAGT 2 cut(s) 821, 1529
AjuI GAANNNNNNNTTGG 2 cut(s) 164, 196
AleI CACNNNNGTG 1 cut(s) 150
Alw21I GWGCWC 2 cut(s) 660, 2168
Alw26I GTCTC 4 cut(s) 536, 1684, 1941, 2168
Alw44I GTGCAC 1 cut(s) 2164
AlwNI CAGNNNCTG 1 cut(s) 943
Ama87I CYCGRG 1 cut(s) 1271
Aor13HI TCCGGA 1 cut(s) 39
AoxI GGCC 7 cut(s) 271, 298, 1114, 1410, 1764, 1922, 2007
ApaLI GTGCAC 1 cut(s) 2164
ApeKI GCWGC 2 cut(s) 943, 2047
ApoI RAATTY 6 cut(s) 329, 1783, 1791, 1950, 2071, 2133
ArsI GACNNNNNNTTYG 2 cut(s) 535, 567
Asp700I GAANNNNTTC 2 cut(s) 639, 1793
AspLEI GCGC 1 cut(s) 393
AspS9I GGNCC 2 cut(s) 1411, 2008
AsuC2I CCSGG 1 cut(s) 1409
AsuHPI GGTGA 2 cut(s) 26, 131
AsuII TTCGAA 1 cut(s) 294
AsuNHI GCTAGC 1 cut(s) 98
AvaI CYCGRG 1 cut(s) 1271
BaeGI GKGCMC 1 cut(s) 2168
BalI TGGCCA 1 cut(s) 1766
BanII GRGCYC 1 cut(s) 660
BauI CACGAG 1 cut(s) 302
BbsI GAAGAC 1 cut(s) 1835
Bbv12I GWGCWC 2 cut(s) 660, 2168
BbvCI CCTCAGC 1 cut(s) 968
BbvI GCAGC 2 cut(s) 930, 2059
BccI CCATC 3 cut(s) 604, 977, 1991
BceAI ACGGC 2 cut(s) 1078, 1360
BcnI CCSGG 1 cut(s) 1409
BcoDI GTCTC 4 cut(s) 536, 1684, 1941, 2168
BcuI ACTAGT 2 cut(s) 821, 1529
BfaI CTAG 9 cut(s) 99, 140, 266, 822, 1040, 1130, 1415, 1530, 1718
BfmI CTRYAG 1 cut(s) 2169
BfuAI ACCTGC 2 cut(s) 384, 1357
BisI GCNGC 2 cut(s) 944, 2048
BlpI GCTNAGC 1 cut(s) 471
BlsI GCNGC 2 cut(s) 945, 2049
Bme1390I CCNGG 1 cut(s) 1409
BmeT110I CYCGRG 1 cut(s) 1271
BmgT120I GGNCC 2 cut(s) 1411, 2008
BmrFI CCNGG 1 cut(s) 1409
BmrI ACTGGG 1 cut(s) 690
BmtI GCTAGC 1 cut(s) 102
BmuI ACTGGG 1 cut(s) 690
BpiI GAAGAC 1 cut(s) 1835
BplI GAGNNNNNCTC 6 cut(s) 676, 708, 1265, 1297, 2165, 2197
BpmI CTGGAG 2 cut(s) 920, 2072
Bpu10I CCTNAGC 3 cut(s) 968, 1713, 1926
Bpu1102I GCTNAGC 1 cut(s) 471
Bpu14I TTCGAA 1 cut(s) 294
BpuEI CTTGAG 6 cut(s) 671, 698, 1028, 1571, 1706, 1916
BpuMI CCSGG 1 cut(s) 1409
BsaAI YACGTR 3 cut(s) 148, 152, 536
BsaJI CCNNGG 1 cut(s) 1799
BsaWI WCCGGW 1 cut(s) 39
BsaXI ACNNNNNCTCC 2 cut(s) 1561, 1591
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 425, 2153
Bse1I ACTGG 5 cut(s) 109, 696, 1193, 1704, 2024
Bse3DI GCAATG 3 cut(s) 32, 707, 1910
BseAI TCCGGA 1 cut(s) 39
BseDI CCNNGG 1 cut(s) 1799
BseGI GGATG 7 cut(s) 265, 348, 615, 843, 926, 929, 1047
BseLI CCNNNNNNNGG 3 cut(s) 115, 425, 2153
BseMI GCAATG 3 cut(s) 32, 707, 1910
BseMII CTCAG 2 cut(s) 462, 959
BseNI ACTGG 5 cut(s) 109, 696, 1193, 1704, 2024
BseRI GAGGAG 5 cut(s) 104, 668, 1273, 1703, 1871
BseSI GKGCMC 1 cut(s) 2168
BseXI GCAGC 2 cut(s) 930, 2059
BsgI GTGCAG 1 cut(s) 610
Bsh1236I CGCG 1 cut(s) 1894
BshFI GGCC 7 cut(s) 273, 300, 1116, 1412, 1766, 1924, 2009
BsiHKAI GWGCWC 2 cut(s) 660, 2168
BsiHKCI CYCGRG 1 cut(s) 1271
BsiSI CCGG 2 cut(s) 40, 1409
BsiWI CGTACG 1 cut(s) 148
BslFI GGGAC 1 cut(s) 660
BslI CCNNNNNNNGG 3 cut(s) 115, 425, 2153
BsmAI GTCTC 4 cut(s) 536, 1684, 1941, 2168
BsmBI CGTCTC 1 cut(s) 536
BsmFI GGGAC 1 cut(s) 660
BsmI GAATGC 3 cut(s) 1034, 1469, 1585
BsnI GGCC 7 cut(s) 273, 300, 1116, 1412, 1766, 1924, 2009
BsoBI CYCGRG 1 cut(s) 1271
Bsp119I TTCGAA 1 cut(s) 294
Bsp1286I GDGCHC 2 cut(s) 660, 2168
Bsp13I TCCGGA 1 cut(s) 39
Bsp1407I TGTACA 1 cut(s) 1139
Bsp143I GATC 2 cut(s) 802, 1514
Bsp1720I GCTNAGC 1 cut(s) 471
Bsp68I TCGCGA 1 cut(s) 1894
BspACI CCGC 6 cut(s) 362, 1078, 1101, 1173, 1219, 1266
BspANI GGCC 7 cut(s) 273, 300, 1116, 1412, 1766, 1924, 2009
BspCNI CTCAG 2 cut(s) 463, 960
BspEI TCCGGA 1 cut(s) 39
BspFNI CGCG 1 cut(s) 1894
BspMAI CTGCAG 1 cut(s) 2173
BspMI ACCTGC 2 cut(s) 384, 1357
BspOI GCTAGC 1 cut(s) 102
BspT104I TTCGAA 1 cut(s) 294
BsrBI CCGCTC 1 cut(s) 364
BsrDI GCAATG 3 cut(s) 32, 707, 1910
BsrGI TGTACA 1 cut(s) 1139
BsrI ACTGG 5 cut(s) 109, 696, 1193, 1704, 2024
BssECI CCNNGG 1 cut(s) 1799
BssMI GATC 2 cut(s) 802, 1514
BssNAI GTATAC 1 cut(s) 1727
BssSI CACGAG 1 cut(s) 302
BssT1I CCWWGG 1 cut(s) 1799
Bst1107I GTATAC 1 cut(s) 1727
Bst2BI CACGAG 1 cut(s) 302
Bst4CI ACNGT 6 cut(s) 1110, 1139, 1547, 1629, 1643, 2092
Bst6I CTCTTC 1 cut(s) 1152
BstAUI TGTACA 1 cut(s) 1139
BstBAI YACGTR 3 cut(s) 148, 152, 536
BstBI TTCGAA 1 cut(s) 294
BstC8I GCNNGC 2 cut(s) 100, 1349
BstDEI CTNAG 4 cut(s) 471, 968, 1713, 1926
BstEII GGTNACC 1 cut(s) 2027
BstF5I GGATG 7 cut(s) 265, 348, 615, 843, 926, 929, 1047
BstFNI CGCG 1 cut(s) 1894
BstHHI GCGC 1 cut(s) 393
BstKTI GATC 2 cut(s) 805, 1517
BstMAI GTCTC 4 cut(s) 536, 1684, 1941, 2168
BstMBI GATC 2 cut(s) 802, 1514
BstMWI GCNNNNNNNGC 3 cut(s) 173, 1263, 1921
BstNSI RCATGY 1 cut(s) 950
BstPI GGTNACC 1 cut(s) 2027
BstSCI CCNGG 1 cut(s) 1407
BstSFI CTRYAG 1 cut(s) 2169
BstSLI GKGCMC 1 cut(s) 2168
BstUI CGCG 1 cut(s) 1894
BstV1I GCAGC 2 cut(s) 930, 2059
BstV2I GAAGAC 1 cut(s) 1835
BstZ17I GTATAC 1 cut(s) 1727
BsuRI GGCC 7 cut(s) 273, 300, 1116, 1412, 1766, 1924, 2009
BtsCI GGATG 7 cut(s) 265, 348, 615, 843, 926, 929, 1047
BtsI GCAGTG 4 cut(s) 44, 995, 1810, 2166
BtsIMutI CAGTG 5 cut(s) 44, 563, 995, 1810, 2166
BtuMI TCGCGA 1 cut(s) 1894
BveI ACCTGC 2 cut(s) 384, 1357
Cac8I GCNNGC 2 cut(s) 100, 1349
CaiI CAGNNNCTG 1 cut(s) 943
CfoI GCGC 1 cut(s) 393
Cfr13I GGNCC 2 cut(s) 1411, 2008
CseI GACGC 1 cut(s) 1981
Csp6I GTAC 7 cut(s) 149, 263, 416, 914, 1140, 1533, 2223
CviAII CATG 3 cut(s) 947, 1066, 1254
CviQI GTAC 7 cut(s) 149, 263, 416, 914, 1140, 1533, 2223
DdeI CTNAG 4 cut(s) 471, 968, 1713, 1926
DpnI GATC 2 cut(s) 804, 1516
DpnII GATC 2 cut(s) 802, 1514
DraIII CACNNNGTG 1 cut(s) 1676
DrdI GACNNNNNNGTC 1 cut(s) 780
DseDI GACNNNNNNGTC 1 cut(s) 780
EaeI YGGCCR 1 cut(s) 1764
Eam1104I CTCTTC 1 cut(s) 1152
EarI CTCTTC 1 cut(s) 1152
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 1 cut(s) 1799
Eco147I AGGCCT 3 cut(s) 273, 300, 1116
Eco24I GRGCYC 1 cut(s) 660
Eco32I GATATC 1 cut(s) 729
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 1 cut(s) 654
Eco88I CYCGRG 1 cut(s) 1271
Eco91I GGTNACC 1 cut(s) 2027
EcoICRI GAGCTC 1 cut(s) 658
EcoO109I RGGNCCY 1 cut(s) 2008
EcoO65I GGTNACC 1 cut(s) 2027
EcoRV GATATC 1 cut(s) 729
EcoT14I CCWWGG 1 cut(s) 1799
EcoT38I GRGCYC 1 cut(s) 660
ErhI CCWWGG 1 cut(s) 1799
Esp3I CGTCTC 1 cut(s) 536
FaeI CATG 3 cut(s) 950, 1069, 1257
FalI AAGNNNNNCTT 2 cut(s) 772, 804
FaqI GGGAC 1 cut(s) 660
FatI CATG 3 cut(s) 946, 1065, 1253
FblI GTMKAC 1 cut(s) 1726
Fnu4HI GCNGC 2 cut(s) 944, 2048
FokI GGATG 7 cut(s) 272, 355, 622, 850, 916, 933, 1034
FriOI GRGCYC 1 cut(s) 660
Fsp4HI GCNGC 2 cut(s) 944, 2048
FspBI CTAG 9 cut(s) 99, 140, 266, 822, 1040, 1130, 1415, 1530, 1718
FspI TGCGCA 1 cut(s) 392
GlaI GCGC 1 cut(s) 392
GluI GCNGC 2 cut(s) 944, 2048
GsuI CTGGAG 2 cut(s) 920, 2072
HaeIII GGCC 7 cut(s) 273, 300, 1116, 1412, 1766, 1924, 2009
HapII CCGG 2 cut(s) 40, 1409
HgaI GACGC 1 cut(s) 1981
HhaI GCGC 1 cut(s) 393
Hin1II CATG 3 cut(s) 950, 1069, 1257
Hin6I GCGC 1 cut(s) 391
HinP1I GCGC 1 cut(s) 391
HincII GTYRAC 4 cut(s) 237, 630, 894, 1625
HindII GTYRAC 4 cut(s) 237, 630, 894, 1625
HindIII AAGCTT 1 cut(s) 1402
HinfI GANTC 7 cut(s) 31, 382, 1094, 1269, 1495, 1633, 1657
HpaII CCGG 2 cut(s) 40, 1409
HphI GGTGA 2 cut(s) 26, 131
Hpy188I TCNGA 9 cut(s) 289, 456, 488, 786, 1519, 1782, 1855, 2185, 2219
HpyAV CCTTC 7 cut(s) 109, 263, 290, 404, 461, 1238, 1437
HpyCH4III ACNGT 6 cut(s) 1110, 1139, 1547, 1629, 1643, 2092
HpyCH4IV ACGT 3 cut(s) 147, 151, 535
HpyF10VI GCNNNNNNNGC 3 cut(s) 173, 1263, 1921
HpyF3I CTNAG 4 cut(s) 471, 968, 1713, 1926
HpySE526I ACGT 3 cut(s) 147, 151, 535
Hsp92II CATG 3 cut(s) 950, 1069, 1257
HspAI GCGC 1 cut(s) 391
Kpn2I TCCGGA 1 cut(s) 39
Kzo9I GATC 2 cut(s) 802, 1514
LmnI GCTCC 7 cut(s) 488, 595, 655, 663, 697, 910, 1858
Lsp1109I GCAGC 2 cut(s) 930, 2059
MaeI CTAG 9 cut(s) 99, 140, 266, 822, 1040, 1130, 1415, 1530, 1718
MaeII ACGT 3 cut(s) 147, 151, 535
MaeIII GTNAC 8 cut(s) 357, 503, 531, 737, 1195, 1321, 1663, 2027
MalI GATC 2 cut(s) 804, 1516
MbiI CCGCTC 1 cut(s) 364
MboI GATC 2 cut(s) 802, 1514
MfeI CAATTG 2 cut(s) 1317, 1839
MhlI GDGCHC 2 cut(s) 660, 2168
MlsI TGGCCA 1 cut(s) 1766
MluNI TGGCCA 1 cut(s) 1766
MlyI GAGTC 2 cut(s) 25, 1263
MmeI TCCRAC 4 cut(s) 301, 822, 1365, 1760
Mox20I TGGCCA 1 cut(s) 1766
MroI TCCGGA 1 cut(s) 39
MroXI GAANNNNTTC 2 cut(s) 639, 1793
MscI TGGCCA 1 cut(s) 1766
MseI TTAA 7 cut(s) 125, 755, 807, 878, 1700, 1899, 1907
MslI CAYNNNNRTG 5 cut(s) 150, 951, 1052, 1641, 2041
Msp20I TGGCCA 1 cut(s) 1766
MspA1I CMGCKG 1 cut(s) 2050
MspI CCGG 2 cut(s) 40, 1409
MspR9I CCNGG 1 cut(s) 1409
MunI CAATTG 2 cut(s) 1317, 1839
Mva1269I GAATGC 3 cut(s) 1034, 1469, 1585
MvnI CGCG 1 cut(s) 1894
MwoI GCNNNNNNNGC 3 cut(s) 173, 1263, 1921
NciI CCSGG 1 cut(s) 1409
NdeII GATC 2 cut(s) 802, 1514
NheI GCTAGC 1 cut(s) 98
NlaIII CATG 3 cut(s) 950, 1069, 1257
NmuCI GTSAC 3 cut(s) 531, 737, 1195
NruI TCGCGA 1 cut(s) 1894
NsbI TGCGCA 1 cut(s) 392
NspI RCATGY 1 cut(s) 950
NspV TTCGAA 1 cut(s) 294
OliI CACNNNNGTG 1 cut(s) 150
PaeR7I CTCGAG 1 cut(s) 1271
PaqCI CACCTGC 1 cut(s) 384
PceI AGGCCT 3 cut(s) 273, 300, 1116
PcsI WCGNNNNNNNCGW 1 cut(s) 300
PctI GAATGC 3 cut(s) 1034, 1469, 1585
PdmI GAANNNNTTC 2 cut(s) 639, 1793
PfeI GAWTC 5 cut(s) 382, 1094, 1495, 1633, 1657
Pfl23II CGTACG 1 cut(s) 148
PflFI GACNNNGTC 1 cut(s) 743
PkrI GCNGC 2 cut(s) 945, 2049
PleI GAGTC 2 cut(s) 25, 1263
PpsI GAGTC 2 cut(s) 25, 1263
Ppu21I YACGTR 3 cut(s) 148, 152, 536
Psp124BI GAGCTC 1 cut(s) 660
PspEI GGTNACC 1 cut(s) 2027
PspLI CGTACG 1 cut(s) 148
PspPI GGNCC 2 cut(s) 1411, 2008
PspXI VCTCGAGB 1 cut(s) 1271
PstI CTGCAG 1 cut(s) 2173
PstNI CAGNNNCTG 1 cut(s) 943
PsyI GACNNNGTC 1 cut(s) 743
PvuII CAGCTG 1 cut(s) 2050
RruI TCGCGA 1 cut(s) 1894
RsaI GTAC 7 cut(s) 150, 264, 417, 915, 1141, 1534, 2224
RsaNI GTAC 7 cut(s) 149, 263, 416, 914, 1140, 1533, 2223
RseI CAYNNNNRTG 5 cut(s) 150, 951, 1052, 1641, 2041
SacI GAGCTC 1 cut(s) 660
SaqAI TTAA 7 cut(s) 125, 755, 807, 878, 1700, 1899, 1907
SatI GCNGC 2 cut(s) 944, 2048
Sau3AI GATC 2 cut(s) 802, 1514
Sau96I GGNCC 2 cut(s) 1411, 2008
SchI GAGTC 2 cut(s) 25, 1263
ScrFI CCNGG 1 cut(s) 1409
SduI GDGCHC 2 cut(s) 660, 2168
SfcI CTRYAG 1 cut(s) 2169
Sfr274I CTCGAG 1 cut(s) 1271
SfuI TTCGAA 1 cut(s) 294
SlaI CTCGAG 1 cut(s) 1271
SmiMI CAYNNNNRTG 5 cut(s) 150, 951, 1052, 1641, 2041
SmlI CTYRAG 7 cut(s) 650, 713, 1007, 1271, 1550, 1685, 1931
SmoI CTYRAG 7 cut(s) 650, 713, 1007, 1271, 1550, 1685, 1931
SpeI ACTAGT 2 cut(s) 821, 1529
SseBI AGGCCT 3 cut(s) 273, 300, 1116
SsiI CCGC 6 cut(s) 362, 1078, 1101, 1173, 1219, 1266
SspI AATATT 1 cut(s) 1421
SspMI CTAG 9 cut(s) 99, 140, 266, 822, 1040, 1130, 1415, 1530, 1718
SstI GAGCTC 1 cut(s) 660
StuI AGGCCT 3 cut(s) 273, 300, 1116
StyD4I CCNGG 1 cut(s) 1407
StyI CCWWGG 1 cut(s) 1799
TaaI ACNGT 6 cut(s) 1110, 1139, 1547, 1629, 1643, 2092
TaiI ACGT 3 cut(s) 150, 154, 538
TaqI TCGA 2 cut(s) 294, 1272
TaqII GACCGA 1 cut(s) 416
TatI WGTACW 3 cut(s) 262, 913, 1139
TfiI GAWTC 5 cut(s) 382, 1094, 1495, 1633, 1657
Tru1I TTAA 7 cut(s) 125, 755, 807, 878, 1700, 1899, 1907
Tru9I TTAA 7 cut(s) 125, 755, 807, 878, 1700, 1899, 1907
TscAI CASTG 5 cut(s) 51, 570, 1002, 1817, 2173
TseFI GTSAC 3 cut(s) 531, 737, 1195
TseI GCWGC 2 cut(s) 943, 2047
Tsp45I GTSAC 3 cut(s) 531, 737, 1195
TspDTI ATGAA 5 cut(s) 17, 374, 1036, 1462, 1625
TspGWI ACGGA 3 cut(s) 324, 1610, 2230
TspRI CASTG 5 cut(s) 51, 570, 1002, 1817, 2173
Tth111I GACNNNGTC 1 cut(s) 743
VneI GTGCAC 1 cut(s) 2164
XapI RAATTY 6 cut(s) 329, 1783, 1791, 1950, 2071, 2133
XbaI TCTAGA 1 cut(s) 139
XceI RCATGY 1 cut(s) 950
XhoI CTCGAG 1 cut(s) 1271
XmiI GTMKAC 1 cut(s) 1726
XmnI GAANNNNTTC 2 cut(s) 639, 1793
XspI CTAG 9 cut(s) 99, 140, 266, 822, 1040, 1130, 1415, 1530, 1718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.