disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 34 - 284 | 7.8e-34 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 162 - 286 | 2.1e-36 | R13L1/DRL21 LRRs |
| LRR_R13L1-DRL21 | PF25019 | 658 - 733 | 3.6e-06 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 815 - 900 | 9.9e-12 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 840 - 897 | 5e-09 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 713 |
| Acc16I | TGCGCA | 1 cut(s) | 2018 |
| Acc36I | ACCTGC | 1 cut(s) | 1804 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 689, 1120 |
| AccBSI | CCGCTC | 1 cut(s) | 814 |
| AccI | GTMKAC | 2 cut(s) | 1624, 1996 |
| AccII | CGCG | 1 cut(s) | 171 |
| AciI | CCGC | 9 cut(s) | 106, 424, 812, 852, 1229, 1326, 1743, 2620, 2748 |
| AclI | AACGTT | 2 cut(s) | 2477, 2832 |
| AclWI | GGATC | 2 cut(s) | 2259, 2458 |
| AcsI | RAATTY | 5 cut(s) | 178, 404, 2517, 2647, 2857 |
| AcuI | CTGAAG | 6 cut(s) | 290, 1532, 1736, 1808, 1992, 2663 |
| AfaI | GTAC | 2 cut(s) | 2179, 2847 |
| AfeI | AGCGCT | 1 cut(s) | 954 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 689, 815, 1120, 2613, 2725 |
| AflII | CTTAAG | 2 cut(s) | 235, 2105 |
| AflIII | ACRYGT | 2 cut(s) | 43, 169 |
| AjnI | CCWGG | 1 cut(s) | 1231 |
| AleI | CACNNNNGTG | 1 cut(s) | 1810 |
| Alw21I | GWGCWC | 2 cut(s) | 546, 2424 |
| Alw26I | GTCTC | 6 cut(s) | 370, 1052, 1609, 2384, 2508, 2567 |
| AlwI | GGATC | 2 cut(s) | 2259, 2458 |
| Ama87I | CYCGRG | 2 cut(s) | 51, 1049 |
| Aor51HI | AGCGCT | 1 cut(s) | 954 |
| AoxI | GGCC | 7 cut(s) | 673, 1585, 1648, 1665, 2375, 2489, 2759 |
| ApeKI | GCWGC | 4 cut(s) | 914, 2082, 2223, 2617 |
| ApoI | RAATTY | 5 cut(s) | 178, 404, 2517, 2647, 2857 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 617, 649, 1931, 1963 |
| AseI | ATTAAT | 3 cut(s) | 524, 2456, 2699 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 78, 204, 342, 675 |
| AspLEI | GCGC | 2 cut(s) | 955, 2019 |
| AspS9I | GGNCC | 4 cut(s) | 1586, 1649, 1665, 2376 |
| AsuHPI | GGTGA | 5 cut(s) | 140, 1732, 2089, 2230, 2671 |
| AvaI | CYCGRG | 2 cut(s) | 51, 1049 |
| BaeGI | GKGCMC | 2 cut(s) | 334, 1960 |
| BanII | GRGCYC | 1 cut(s) | 2424 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1608, 1640 |
| BauI | CACGAG | 1 cut(s) | 1610 |
| Bbv12I | GWGCWC | 2 cut(s) | 546, 2424 |
| BbvCI | CCTCAGC | 1 cut(s) | 1367 |
| BbvI | GCAGC | 4 cut(s) | 926, 2094, 2235, 2604 |
| BccI | CCATC | 2 cut(s) | 1568, 2325 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 337, 371 |
| BciT130I | CCWGG | 1 cut(s) | 1233 |
| BclI | TGATCA | 1 cut(s) | 366 |
| BcoDI | GTCTC | 6 cut(s) | 370, 1052, 1609, 2384, 2508, 2567 |
| BfaI | CTAG | 7 cut(s) | 83, 668, 1388, 1434, 1439, 2042, 2866 |
| BfmI | CTRYAG | 3 cut(s) | 285, 2369, 2788 |
| BfoI | RGCGCY | 1 cut(s) | 956 |
| BfrI | CTTAAG | 2 cut(s) | 235, 2105 |
| BfuAI | ACCTGC | 1 cut(s) | 1804 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2365 |
| BisI | GCNGC | 7 cut(s) | 425, 915, 1229, 2083, 2224, 2618, 2749 |
| BlsI | GCNGC | 7 cut(s) | 426, 916, 1230, 2084, 2225, 2619, 2750 |
| BmcAI | AGTACT | 1 cut(s) | 2847 |
| Bme1390I | CCNGG | 1 cut(s) | 1233 |
| BmeT110I | CYCGRG | 2 cut(s) | 51, 1049 |
| BmgT120I | GGNCC | 4 cut(s) | 1586, 1649, 1665, 2376 |
| BmrFI | CCNGG | 1 cut(s) | 1233 |
| BmsI | GCATC | 6 cut(s) | 776, 990, 1016, 1478, 2470, 2723 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1507 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1075, 1107 |
| BpmI | CTGGAG | 1 cut(s) | 560 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1367, 2493 |
| BpuEI | CTTGAG | 4 cut(s) | 53, 1427, 2267, 2483 |
| BsaAI | YACGTR | 2 cut(s) | 547, 2264 |
| BsaI | GGTCTC | 1 cut(s) | 1609 |
| BsaJI | CCNNGG | 3 cut(s) | 95, 152, 1232 |
| BsaWI | WCCGGW | 1 cut(s) | 457 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 689, 815, 1120, 2613, 2725 |
| Bse1I | ACTGG | 3 cut(s) | 75, 869, 2386 |
| Bse3DI | GCAATG | 3 cut(s) | 1174, 1291, 1642 |
| BseBI | CCWGG | 1 cut(s) | 1233 |
| BseDI | CCNNGG | 3 cut(s) | 95, 152, 1232 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 689, 815, 1120, 2613, 2725 |
| BseMI | GCAATG | 3 cut(s) | 1174, 1291, 1642 |
| BseMII | CTCAG | 3 cut(s) | 365, 873, 1358 |
| BseNI | ACTGG | 3 cut(s) | 75, 869, 2386 |
| BseRI | GAGGAG | 6 cut(s) | 668, 944, 1904, 1907, 1994, 1997 |
| BseSI | GKGCMC | 2 cut(s) | 334, 1960 |
| BseXI | GCAGC | 4 cut(s) | 926, 2094, 2235, 2604 |
| BsgI | GTGCAG | 1 cut(s) | 1522 |
| Bsh1236I | CGCG | 1 cut(s) | 171 |
| BshFI | GGCC | 7 cut(s) | 675, 1587, 1650, 1667, 2377, 2491, 2761 |
| BsiHKAI | GWGCWC | 2 cut(s) | 546, 2424 |
| BsiHKCI | CYCGRG | 2 cut(s) | 51, 1049 |
| BsiSI | CCGG | 1 cut(s) | 458 |
| BslFI | GGGAC | 4 cut(s) | 791, 1720, 1800, 2756 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 689, 815, 1120, 2613, 2725 |
| BsmAI | GTCTC | 6 cut(s) | 370, 1052, 1609, 2384, 2508, 2567 |
| BsmFI | GGGAC | 4 cut(s) | 791, 1720, 1800, 2756 |
| BsmI | GAATGC | 3 cut(s) | 193, 1574, 1850 |
| BsnI | GGCC | 7 cut(s) | 675, 1587, 1650, 1667, 2377, 2491, 2761 |
| Bso31I | GGTCTC | 1 cut(s) | 1609 |
| BsoBI | CYCGRG | 2 cut(s) | 51, 1049 |
| Bsp1286I | GDGCHC | 4 cut(s) | 334, 546, 1960, 2424 |
| Bsp143I | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| BspACI | CCGC | 9 cut(s) | 106, 424, 812, 852, 1229, 1326, 1743, 2620, 2748 |
| BspANI | GGCC | 7 cut(s) | 675, 1587, 1650, 1667, 2377, 2491, 2761 |
| BspCNI | CTCAG | 3 cut(s) | 366, 874, 1359 |
| BspFNI | CGCG | 1 cut(s) | 171 |
| BspMI | ACCTGC | 1 cut(s) | 1804 |
| BspPI | GGATC | 2 cut(s) | 2259, 2458 |
| BspQI | GCTCTTC | 1 cut(s) | 1806 |
| BspTI | CTTAAG | 2 cut(s) | 235, 2105 |
| BspTNI | GGTCTC | 1 cut(s) | 1609 |
| BsrBI | CCGCTC | 1 cut(s) | 814 |
| BsrDI | GCAATG | 3 cut(s) | 1174, 1291, 1642 |
| BsrI | ACTGG | 3 cut(s) | 75, 869, 2386 |
| BssECI | CCNNGG | 3 cut(s) | 95, 152, 1232 |
| BssMI | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| BssNAI | GTATAC | 1 cut(s) | 1625 |
| BssSI | CACGAG | 1 cut(s) | 1610 |
| BssT1I | CCWWGG | 1 cut(s) | 95 |
| Bst1107I | GTATAC | 1 cut(s) | 1625 |
| Bst2BI | CACGAG | 1 cut(s) | 1610 |
| Bst2UI | CCWGG | 1 cut(s) | 1233 |
| Bst4CI | ACNGT | 9 cut(s) | 114, 128, 156, 1063, 1703, 1812, 1920, 2373, 2792 |
| Bst6I | CTCTTC | 6 cut(s) | 333, 483, 1551, 1755, 1806, 1827 |
| BstAFI | CTTAAG | 2 cut(s) | 235, 2105 |
| BstBAI | YACGTR | 2 cut(s) | 547, 2264 |
| BstC8I | GCNNGC | 4 cut(s) | 293, 499, 1005, 1789 |
| BstDEI | CTNAG | 7 cut(s) | 374, 576, 882, 1367, 2465, 2493, 2763 |
| BstDSI | CCRYGG | 1 cut(s) | 152 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2723 |
| BstFNI | CGCG | 1 cut(s) | 171 |
| BstH2I | RGCGCY | 1 cut(s) | 956 |
| BstHHI | GCGC | 2 cut(s) | 955, 2019 |
| BstKTI | GATC | 4 cut(s) | 369, 901, 2254, 2453 |
| BstMAI | GTCTC | 6 cut(s) | 370, 1052, 1609, 2384, 2508, 2567 |
| BstMBI | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 572, 2365, 2374 |
| BstNI | CCWGG | 1 cut(s) | 1233 |
| BstNSI | RCATGY | 1 cut(s) | 47 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1507 |
| BstSCI | CCNGG | 1 cut(s) | 1231 |
| BstSFI | CTRYAG | 3 cut(s) | 285, 2369, 2788 |
| BstSLI | GKGCMC | 2 cut(s) | 334, 1960 |
| BstUI | CGCG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 4 cut(s) | 926, 2094, 2235, 2604 |
| BstX2I | RGATCY | 1 cut(s) | 2251 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2386 |
| BstYI | RGATCY | 1 cut(s) | 2251 |
| BstZ17I | GTATAC | 1 cut(s) | 1625 |
| BsuRI | GGCC | 7 cut(s) | 675, 1587, 1650, 1667, 2377, 2491, 2761 |
| BtgI | CCRYGG | 1 cut(s) | 152 |
| BtgZI | GCGATG | 1 cut(s) | 1587 |
| BtsI | GCAGTG | 2 cut(s) | 327, 1783 |
| BtsIMutI | CAGTG | 7 cut(s) | 68, 110, 327, 1783, 1817, 2378, 2379 |
| BveI | ACCTGC | 1 cut(s) | 1804 |
| Cac8I | GCNNGC | 4 cut(s) | 293, 499, 1005, 1789 |
| CfoI | GCGC | 2 cut(s) | 955, 2019 |
| Cfr13I | GGNCC | 4 cut(s) | 1586, 1649, 1665, 2376 |
| CseI | GACGC | 2 cut(s) | 160, 1935 |
| Csp6I | GTAC | 2 cut(s) | 2178, 2846 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1183, 1218 |
| CviAII | CATG | 7 cut(s) | 44, 721, 1465, 1675, 1860, 2023, 2613 |
| CviQI | GTAC | 2 cut(s) | 2178, 2846 |
| DdeI | CTNAG | 7 cut(s) | 374, 576, 882, 1367, 2465, 2493, 2763 |
| DpnI | GATC | 4 cut(s) | 368, 900, 2253, 2452 |
| DpnII | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| DraI | TTTAAA | 2 cut(s) | 2803, 2862 |
| Eam1104I | CTCTTC | 6 cut(s) | 333, 483, 1551, 1755, 1806, 1827 |
| EarI | CTCTTC | 6 cut(s) | 333, 483, 1551, 1755, 1806, 1827 |
| Ecl136II | GAGCTC | 1 cut(s) | 2422 |
| Eco130I | CCWWGG | 1 cut(s) | 95 |
| Eco147I | AGGCCT | 1 cut(s) | 675 |
| Eco24I | GRGCYC | 1 cut(s) | 2424 |
| Eco31I | GGTCTC | 1 cut(s) | 1609 |
| Eco32I | GATATC | 1 cut(s) | 1128 |
| Eco47III | AGCGCT | 1 cut(s) | 954 |
| Eco53kI | GAGCTC | 1 cut(s) | 2422 |
| Eco57I | CTGAAG | 6 cut(s) | 290, 1532, 1736, 1808, 1992, 2663 |
| Eco88I | CYCGRG | 2 cut(s) | 51, 1049 |
| EcoICRI | GAGCTC | 1 cut(s) | 2422 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2723 |
| EcoRII | CCWGG | 1 cut(s) | 1231 |
| EcoRV | GATATC | 1 cut(s) | 1128 |
| EcoT14I | CCWWGG | 1 cut(s) | 95 |
| EcoT22I | ATGCAT | 1 cut(s) | 2463 |
| EcoT38I | GRGCYC | 1 cut(s) | 2424 |
| ErhI | CCWWGG | 1 cut(s) | 95 |
| FaeI | CATG | 7 cut(s) | 47, 724, 1468, 1678, 1863, 2026, 2616 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 79, 111 |
| FaqI | GGGAC | 4 cut(s) | 791, 1720, 1800, 2756 |
| FatI | CATG | 7 cut(s) | 43, 720, 1464, 1674, 1859, 2022, 2612 |
| FbaI | TGATCA | 1 cut(s) | 366 |
| FblI | GTMKAC | 2 cut(s) | 1624, 1996 |
| Fnu4HI | GCNGC | 7 cut(s) | 425, 915, 1229, 2083, 2224, 2618, 2749 |
| FriOI | GRGCYC | 1 cut(s) | 2424 |
| Fsp4HI | GCNGC | 7 cut(s) | 425, 915, 1229, 2083, 2224, 2618, 2749 |
| FspBI | CTAG | 7 cut(s) | 83, 668, 1388, 1434, 1439, 2042, 2866 |
| FspI | TGCGCA | 1 cut(s) | 2018 |
| GlaI | GCGC | 2 cut(s) | 954, 2018 |
| GluI | GCNGC | 7 cut(s) | 425, 915, 1229, 2083, 2224, 2618, 2749 |
| GsuI | CTGGAG | 1 cut(s) | 560 |
| HaeII | RGCGCY | 1 cut(s) | 956 |
| HaeIII | GGCC | 7 cut(s) | 675, 1587, 1650, 1667, 2377, 2491, 2761 |
| HapII | CCGG | 1 cut(s) | 458 |
| HgaI | GACGC | 2 cut(s) | 160, 1935 |
| HhaI | GCGC | 2 cut(s) | 955, 2019 |
| Hin1II | CATG | 7 cut(s) | 47, 724, 1468, 1678, 1863, 2026, 2616 |
| Hin6I | GCGC | 2 cut(s) | 953, 2017 |
| HinP1I | GCGC | 2 cut(s) | 953, 2017 |
| HincII | GTYRAC | 3 cut(s) | 636, 1059, 2475 |
| HindII | GTYRAC | 3 cut(s) | 636, 1059, 2475 |
| HindIII | AAGCTT | 2 cut(s) | 162, 1789 |
| HinfI | GANTC | 8 cut(s) | 37, 264, 804, 1096, 1447, 2110, 2426, 2638 |
| HpaI | GTTAAC | 1 cut(s) | 2475 |
| HpaII | CCGG | 1 cut(s) | 458 |
| HphI | GGTGA | 5 cut(s) | 140, 1732, 2089, 2230, 2671 |
| Hpy166II | GTNNAC | 7 cut(s) | 636, 907, 1059, 1502, 1625, 1997, 2475 |
| Hpy188I | TCNGA | 9 cut(s) | 309, 348, 976, 1095, 1270, 1707, 1755, 2011, 2643 |
| Hpy8I | GTNNAC | 7 cut(s) | 636, 907, 1059, 1502, 1625, 1997, 2475 |
| Hpy99I | CGWCG | 2 cut(s) | 483, 2040 |
| HpyAV | CCTTC | 7 cut(s) | 314, 446, 665, 686, 794, 2042, 2440 |
| HpyCH4III | ACNGT | 9 cut(s) | 114, 128, 156, 1063, 1703, 1812, 1920, 2373, 2792 |
| HpyCH4IV | ACGT | 7 cut(s) | 448, 546, 740, 1016, 2263, 2477, 2832 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 572, 2365, 2374 |
| HpyF3I | CTNAG | 7 cut(s) | 374, 576, 882, 1367, 2465, 2493, 2763 |
| HpySE526I | ACGT | 7 cut(s) | 448, 546, 740, 1016, 2263, 2477, 2832 |
| Hsp92II | CATG | 7 cut(s) | 47, 724, 1468, 1678, 1863, 2026, 2616 |
| HspAI | GCGC | 2 cut(s) | 953, 2017 |
| Ksp22I | TGATCA | 1 cut(s) | 366 |
| KspAI | GTTAAC | 1 cut(s) | 2475 |
| Kzo9I | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| LguI | GCTCTTC | 1 cut(s) | 1806 |
| LmnI | GCTCC | 5 cut(s) | 541, 838, 878, 1096, 1213 |
| Lsp1109I | GCAGC | 4 cut(s) | 926, 2094, 2235, 2604 |
| LweI | GCATC | 6 cut(s) | 776, 990, 1016, 1478, 2470, 2723 |
| MaeI | CTAG | 7 cut(s) | 83, 668, 1388, 1434, 1439, 2042, 2866 |
| MaeII | ACGT | 7 cut(s) | 448, 546, 740, 1016, 2263, 2477, 2832 |
| MaeIII | GTNAC | 5 cut(s) | 108, 449, 732, 777, 1509 |
| MalI | GATC | 4 cut(s) | 368, 900, 2253, 2452 |
| MbiI | CCGCTC | 1 cut(s) | 814 |
| MboI | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| MfeI | CAATTG | 2 cut(s) | 509, 1713 |
| MflI | RGATCY | 1 cut(s) | 2251 |
| MhlI | GDGCHC | 4 cut(s) | 334, 546, 1960, 2424 |
| MluI | ACGCGT | 1 cut(s) | 169 |
| MlyI | GAGTC | 3 cut(s) | 813, 1105, 2104 |
| MmeI | TCCRAC | 4 cut(s) | 675, 856, 1101, 2428 |
| Mph1103I | ATGCAT | 1 cut(s) | 2463 |
| MroXI | GAANNNNTTC | 4 cut(s) | 78, 204, 342, 675 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1810 |
| MspA1I | CMGCKG | 1 cut(s) | 2748 |
| MspCI | CTTAAG | 2 cut(s) | 235, 2105 |
| MspI | CCGG | 1 cut(s) | 458 |
| MspR9I | CCNGG | 1 cut(s) | 1233 |
| MunI | CAATTG | 2 cut(s) | 509, 1713 |
| Mva1269I | GAATGC | 3 cut(s) | 193, 1574, 1850 |
| MvaI | CCWGG | 1 cut(s) | 1233 |
| MvnI | CGCG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 572, 2365, 2374 |
| NdeII | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| NlaIII | CATG | 7 cut(s) | 47, 724, 1468, 1678, 1863, 2026, 2616 |
| NmuCI | GTSAC | 2 cut(s) | 108, 1509 |
| NsbI | TGCGCA | 1 cut(s) | 2018 |
| NsiI | ATGCAT | 1 cut(s) | 2463 |
| NspI | RCATGY | 1 cut(s) | 47 |
| OliI | CACNNNNGTG | 1 cut(s) | 1810 |
| PaeR7I | CTCGAG | 1 cut(s) | 1049 |
| PceI | AGGCCT | 1 cut(s) | 675 |
| PciI | ACATGT | 1 cut(s) | 43 |
| PciSI | GCTCTTC | 1 cut(s) | 1806 |
| PctI | GAATGC | 3 cut(s) | 193, 1574, 1850 |
| PdmI | GAANNNNTTC | 4 cut(s) | 78, 204, 342, 675 |
| PfeI | GAWTC | 5 cut(s) | 37, 264, 1447, 2426, 2638 |
| PflFI | GACNNNGTC | 2 cut(s) | 1015, 2113 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 689, 1120 |
| PkrI | GCNGC | 7 cut(s) | 426, 916, 1230, 2084, 2225, 2619, 2750 |
| PleI | GAGTC | 3 cut(s) | 812, 1104, 2104 |
| PpsI | GAGTC | 3 cut(s) | 812, 1104, 2104 |
| Ppu21I | YACGTR | 2 cut(s) | 547, 2264 |
| PscI | ACATGT | 1 cut(s) | 43 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1507 |
| PshBI | ATTAAT | 3 cut(s) | 524, 2456, 2699 |
| PsiI | TTATAA | 1 cut(s) | 713 |
| Psp124BI | GAGCTC | 1 cut(s) | 2424 |
| Psp1406I | AACGTT | 2 cut(s) | 2477, 2832 |
| Psp6I | CCWGG | 1 cut(s) | 1231 |
| PspGI | CCWGG | 1 cut(s) | 1231 |
| PspPI | GGNCC | 4 cut(s) | 1586, 1649, 1665, 2376 |
| PsuI | RGATCY | 1 cut(s) | 2251 |
| PsyI | GACNNNGTC | 2 cut(s) | 1015, 2113 |
| RsaI | GTAC | 2 cut(s) | 2179, 2847 |
| RsaNI | GTAC | 2 cut(s) | 2178, 2846 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1810 |
| SacI | GAGCTC | 1 cut(s) | 2424 |
| SapI | GCTCTTC | 1 cut(s) | 1806 |
| SatI | GCNGC | 7 cut(s) | 425, 915, 1229, 2083, 2224, 2618, 2749 |
| Sau3AI | GATC | 4 cut(s) | 366, 898, 2251, 2450 |
| Sau96I | GGNCC | 4 cut(s) | 1586, 1649, 1665, 2376 |
| ScaI | AGTACT | 1 cut(s) | 2847 |
| SchI | GAGTC | 3 cut(s) | 813, 1105, 2104 |
| ScrFI | CCNGG | 1 cut(s) | 1233 |
| SduI | GDGCHC | 4 cut(s) | 334, 546, 1960, 2424 |
| SfaNI | GCATC | 6 cut(s) | 776, 990, 1016, 1478, 2470, 2723 |
| SfcI | CTRYAG | 3 cut(s) | 285, 2369, 2788 |
| Sfr274I | CTCGAG | 1 cut(s) | 1049 |
| SlaI | CTCGAG | 1 cut(s) | 1049 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1810 |
| SmlI | CTYRAG | 7 cut(s) | 32, 235, 1049, 1406, 2105, 2246, 2498 |
| SmoI | CTYRAG | 7 cut(s) | 32, 235, 1049, 1406, 2105, 2246, 2498 |
| SseBI | AGGCCT | 1 cut(s) | 675 |
| SsiI | CCGC | 9 cut(s) | 106, 424, 812, 852, 1229, 1326, 1743, 2620, 2748 |
| SspI | AATATT | 2 cut(s) | 196, 847 |
| SspMI | CTAG | 7 cut(s) | 83, 668, 1388, 1434, 1439, 2042, 2866 |
| SstI | GAGCTC | 1 cut(s) | 2424 |
| StuI | AGGCCT | 1 cut(s) | 675 |
| StyD4I | CCNGG | 1 cut(s) | 1231 |
| StyI | CCWWGG | 1 cut(s) | 95 |
| TaaI | ACNGT | 9 cut(s) | 114, 128, 156, 1063, 1703, 1812, 1920, 2373, 2792 |
| TaiI | ACGT | 7 cut(s) | 451, 549, 743, 1019, 2266, 2480, 2835 |
| TaqI | TCGA | 8 cut(s) | 40, 481, 679, 1010, 1050, 2035, 2186, 2424 |
| TaqII | GACCGA | 1 cut(s) | 806 |
| TatI | WGTACW | 1 cut(s) | 2845 |
| TauI | GCSGC | 3 cut(s) | 427, 1231, 2751 |
| TfiI | GAWTC | 5 cut(s) | 37, 264, 1447, 2426, 2638 |
| TscAI | CASTG | 7 cut(s) | 75, 117, 327, 1783, 1817, 2378, 2386 |
| TseFI | GTSAC | 2 cut(s) | 108, 1509 |
| TseI | GCWGC | 4 cut(s) | 914, 2082, 2223, 2617 |
| Tsp45I | GTSAC | 2 cut(s) | 108, 1509 |
| TspDTI | ATGAA | 3 cut(s) | 709, 1008, 1736 |
| TspGWI | ACGGA | 3 cut(s) | 851, 1642, 2165 |
| TspRI | CASTG | 7 cut(s) | 75, 117, 327, 1783, 1817, 2378, 2386 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1015, 2113 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 689, 1120 |
| Vha464I | CTTAAG | 2 cut(s) | 235, 2105 |
| VspI | ATTAAT | 3 cut(s) | 524, 2456, 2699 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2723 |
| XapI | RAATTY | 5 cut(s) | 178, 404, 2517, 2647, 2857 |
| XbaI | TCTAGA | 1 cut(s) | 1438 |
| XceI | RCATGY | 1 cut(s) | 47 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1596, 1659, 1857 |
| XhoI | CTCGAG | 1 cut(s) | 1049 |
| XmiI | GTMKAC | 2 cut(s) | 1624, 1996 |
| XmnI | GAANNNNTTC | 4 cut(s) | 78, 204, 342, 675 |
| XspI | CTAG | 7 cut(s) | 83, 668, 1388, 1434, 1439, 2042, 2866 |
| ZrmI | AGTACT | 1 cut(s) | 2847 |
| Zsp2I | ATGCAT | 1 cut(s) | 2463 |