Rmu_sc0000654.1_g000045

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000654.1
Physical Location & Seq
Reverse (-)
215786 .. 223259
7474 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000654.1_g000045.1.cds

Sequence Viewer

Length: 3954 bp
atggcacagaaaattaagaagatcaacatatctgtggatgagttgaataagaaggcaggtgctattggcttagttgctagactatccttagatgcaacaacttcccatggtataagcattgacagggagacctactctctcttaaaacaagatgaaaacaatatcattggaagggacgatgttgtggcagatattgttcaagccctgaccaaatcaaaccaaaatctggaaagtgatctctcggttctggccattgtgggtatgggaggtcttggaaagacaactttggctaaatcaatatatcatgaatcagagataagtaggcactttgagaaaaagatgtggatatgtgtatctaccccttttgaagtcaattccattctgagagggatcctggaatatcttaaaccagaaaatgctgcggtgaaagctatagatgcaatatgtagtattctccgagaagagttgaaaggaaagagataccttcttatacttgatgatgtatggaatgaagatgctgaaaaatggaatgatttgaagagttgcttgctaagaattactgatacccaaggaagtagcattgttgttactacccgcagtggcaaagttgcaaaaatggtagagacccttcgtaggtgtaatttgaaaaaactatccgacaatgaatgttggctcatattgaagggtaaagcaattccagtcggaagtgttcctatacttgaagatcaagagagaattggaagggagattgccaaaaagtgtgaaggtgtaccgttagtggcaaaggtactaggaaacattatgcgctctaaaacgagcaatgaatggagttcaattatggaaagtaaaatatgggatttgccggaagaagaagaaagaatcatgtcaattttaaagttgagttttgatgatttgaaatgtccatcattgaaacaatgttttgcatattgctcgaaattcatcaaagacttcgtaatggaaaaggatgacttagtccaactttggatggctcaaggatggcttcaccccaccaaaagtaatatggagatggaggatatagggaacgaatatttcaacattttatcagaaaaatccctttttgaagacgttagaaagtattctaatggttatacaacatgcaagatgcacgatcttgtgcatgaccttgcaggacgagtgtcaaacatggcaaaccgccgctcactattttccaagggagaagcacttgggaacaccttgcctacctttagatctttacgtgtgttaaatttatacagggcagacattgacaagttgccgaattcaattggaaagttggcacacttgaggtatctgaatgttatggaaacaaatgtgaacgcatttccaaaatctattggtcagttttattaccttgagacgtttaaaatgccttatcatgttgaagagttcccaaagatgattgctgatatgatcaacttgagacatgtttattttggtaaatatgcgaaagttccggttggggtattgggaagattgactaatctcagatcattaccttttctgaaggtgggtaaggagactggacctagaattgaggaactgggcgggttaagccatttgagaggcaccttatctatctataatctggagcatgtaagagatggagaagaagcagtgaatgcaaagttagttgataagaaacatatacgcaagttgactctcgactggaagcttagtagaccaagcaacaatgttgacaatgaggatgatgtacttgaaggtctgcaaccacattgtaatttggaaattttgaagattcaggggtttatgggtgtcaagtttccatcatggtttttggatgccagcagcttgaaagaaattgaattagcagggtgcaacaaatgcgaaggagttccaatattgggccatctgccaaatctcatacatgttaagatgaggaacatgcagaacctaaggtgcttggggtctgagttttatggttacgatcagatttcaagtgcaacaacaagtgacgggagaaagactttgtttcctgctttgagatcattacatattgagaatgccgagaatctgatagaatggatggaagcaggggaagtgatgctgacagcagaaaaattaagggtgtttcctaaccttgaggacgtgaccctgcatcggtgtaagcaattgagaagtgcgcccagtcattttccatctctcaagaagttggtgatacgaggagtggagagtggtatgcctatagcaagtattttaagcaataaactgactactctcactcatctccttgtacttgatgtcgagggacttactagtcttccggaagagacgttaagaaacaacaagaatcttgaatctctgtatataagcaactgtccggagttaagctgcattgctccccatggatttaactgctgcgcatctgttgagacactaactattgagaagtgtcctaagttgaggtatttatctgatgggccactcccactctctctcaaggagttggagataataaattgctccagtctagagtccattccaatcatccctgagcaaggcggtcccccatctctgcgcaaattgcgaatatccgagtgttctcagttatccagtttacctgatgggctacaatactgcacatctcttcaagaattgcagatacggagctgcccagagataacgtccattccagcccaatgctgcacatctcttcaacaactggacatagggagctgcccaaagataacatccattccaattccatctgcgggcctcccgttctaccacaacttgaatcattatggatctacgggtttctttgagggagtggaggctattccagaatggttgggaaaccttgcatctcttcactccttaactattttccgttgcaagaatctgatgtatctaccttccgtccaagctatgcaacgcctcaccaaattagattcgttaagcacctacaattgtccccttttgagcgaaagatgcaccgcggagagcggcccagagtggcctaagatttctcatattccaaacatctatggggcgaaaacactagttggaaactacaatccatttgaagctgtattagatgtgaaagacgatgaacagcacctcatttgcgctaaactgaaagagttgtctcttcaacatgatctcaacagtgaataccaaaaggtgcctttgtcaatagatgttaaagatagtgctattgttaatgcaacgcctgtagcagtcaattggaatccacccgaaccatggggtttagtggagatgagggtagagaggtctcattcctggtctgagaagaagagtggagggagtccttgctcattgtctgcgctgagtcctcgatcctcgtctgatcagtcacaaatcgataaggagcaggcacagtctgagattaaacagttaaaagatgatatgaagtttgaatctgagtctacaccatcccttgcacatattgatgaaaagcaggcagagtctgaaattaagttaaaagacggtatgaagttggaatccgagtctgtaccctccacacgagaaggattatgcattgttgggttagcaatggcatccccacacgtattcaccagtctcaagtccttgggaattggcccgttttgtgaagagctggattcattccctgctcttcaggttctaccacaacttgaaacattgacgatctacgggtggctgaagctcaagtctctgcctgaacaaattcaacacttgacgtctttgacctatttgcggatatattggtttgagggagtggaggctattccagaatggttgggaaaccttgcatctcttcacctcttaactattttccattggaagaatctgatgtatctaccttccgtccaagctatgcaacgcctcaccaaattagattcgttaagcatctacaattgtccccttttgagagaaagatgcaccgcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1317

Amino Acids

147.87

Weight (kDa)

6.25

Isoelectric Point (pI)

50.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 47
AasI GACNNNNNNGTC 1 cut(s) 2316
AatII GACGTC 1 cut(s) 3746
Acc16I TGCGCA 2 cut(s) 2422, 2579
Acc36I ACCTGC 1 cut(s) 47
AccB1I GGYRCC 2 cut(s) 1607, 3184
AccB7I CCANNNNNTGG 1 cut(s) 226
AccBSI CCGCTC 2 cut(s) 1200, 3006
AccI GTMKAC 2 cut(s) 1720, 3449
AccII CGCG 2 cut(s) 2999, 3950
AccIII TCCGGA 2 cut(s) 2323, 2380
AclWI GGATC 4 cut(s) 385, 398, 2815, 3354
AcoI YGGCCR 1 cut(s) 249
AcsI RAATTY 5 cut(s) 956, 1267, 1300, 1788, 3729
AcuI CTGAAG 3 cut(s) 1565, 3644, 3725
AcyI GRCGYC 1 cut(s) 3743
AfaI GTAC 5 cut(s) 771, 789, 1755, 2295, 3537
AfiI CCNNNNNNNGG 8 cut(s) 226, 633, 1904, 2160, 2558, 2771, 3264, 3759
AflIII ACRYGT 4 cut(s) 1258, 1465, 1927, 3589
AhlI ACTAGT 2 cut(s) 2315, 3061
AjiI CACGTC 1 cut(s) 2149
AjnI CCWGG 2 cut(s) 393, 3302
AlwI GGATC 4 cut(s) 385, 398, 2815, 3354
AlwNI CAGNNNCTG 1 cut(s) 3491
Aor13HI TCCGGA 2 cut(s) 2323, 2380
AoxI GGCC 7 cut(s) 249, 1906, 2480, 2773, 3007, 3017, 3622
ApeKI GCWGC 7 cut(s) 419, 1848, 2391, 2418, 2670, 2703, 2736
ApoI RAATTY 5 cut(s) 956, 1267, 1300, 1788, 3729
Asp700I GAANNNNTTC 3 cut(s) 1117, 1893, 3729
AspLEI GCGC 6 cut(s) 807, 2185, 2423, 2580, 3131, 3349
AspS9I GGNCC 7 cut(s) 1565, 1906, 2480, 2564, 2773, 3008, 3623
AsuHPI GGTGA 7 cut(s) 436, 1016, 2227, 2932, 3589, 3815, 3883
AvaII GGWCC 2 cut(s) 1565, 2564
AxyI CCTNAGG 1 cut(s) 1955
BalI TGGCCA 1 cut(s) 251
BamHI GGATCC 1 cut(s) 390
BanI GGYRCC 2 cut(s) 1607, 3184
BarI GAAGNNNNNNTAC 2 cut(s) 612, 644
BauI CACGAG 1 cut(s) 3546
BbsI GAAGAC 2 cut(s) 1110, 2312
BbvI GCAGC 7 cut(s) 406, 1860, 2378, 2405, 2657, 2690, 2723
BcgI CGANNNNNNTGC 2 cut(s) 933, 967
BciT130I CCWGG 2 cut(s) 395, 3304
BclI TGATCA 2 cut(s) 1452, 3370
BcuI ACTAGT 2 cut(s) 2315, 3061
BfaI CTAG 6 cut(s) 78, 791, 1569, 2316, 2531, 3062
BfmI CTRYAG 3 cut(s) 432, 2244, 3234
BfuAI ACCTGC 1 cut(s) 47
BglII AGATCT 1 cut(s) 1250
BisI GCNGC 9 cut(s) 420, 1198, 1849, 2392, 2419, 2671, 2704, 2737, 3007
BlsI GCNGC 9 cut(s) 421, 1199, 1850, 2393, 2420, 2672, 2705, 2738, 3008
Bme1390I CCNGG 2 cut(s) 395, 3304
Bme18I GGWCC 2 cut(s) 1565, 2564
BmgBI CACGTC 1 cut(s) 2149
BmgT120I GGNCC 7 cut(s) 1565, 1906, 2480, 2564, 2773, 3008, 3623
BmiI GGNNCC 4 cut(s) 392, 1609, 2566, 3186
BmrFI CCNGG 2 cut(s) 395, 3304
BmrI ACTGGG 2 cut(s) 1592, 2181
BmuI ACTGGG 2 cut(s) 1592, 2181
BoxI GACNNNNGTC 1 cut(s) 1177
BpiI GAAGAC 2 cut(s) 1110, 2312
BplI GAGNNNNNCTC 2 cut(s) 119, 151
BpmI CTGGAG 2 cut(s) 1649, 2509
Bpu10I CCTNAGC 1 cut(s) 2553
BpuEI CTTGAG 9 cut(s) 996, 1345, 1415, 1480, 2162, 2189, 2483, 3590, 3695
Bsa29I ATCGAT 1 cut(s) 3384
BsaAI YACGTR 2 cut(s) 1259, 3592
BsaHI GRCGYC 1 cut(s) 3743
BsaI GGTCTC 3 cut(s) 122, 617, 3300
BsaJI CCNNGG 7 cut(s) 106, 568, 1212, 2404, 2997, 3263, 3612
BsaWI WCCGGW 3 cut(s) 1495, 2323, 2380
Bsc4I CCNNNNNNNGG 8 cut(s) 226, 633, 1904, 2160, 2558, 2771, 3264, 3759
Bse1I ACTGG 9 cut(s) 698, 1567, 1587, 1712, 2187, 2526, 2613, 2727, 3600
Bse21I CCTNAGG 1 cut(s) 1955
Bse3DI GCAATG 3 cut(s) 826, 2394, 3582
BseAI TCCGGA 2 cut(s) 2323, 2380
BseBI CCWGG 2 cut(s) 395, 3304
BseCI ATCGAT 1 cut(s) 3384
BseDI CCNNGG 7 cut(s) 106, 568, 1212, 2404, 2997, 3263, 3612
BseLI CCNNNNNNNGG 8 cut(s) 226, 633, 1904, 2160, 2558, 2771, 3264, 3759
BseMI GCAATG 3 cut(s) 826, 2394, 3582
BseMII CTCAG 9 cut(s) 374, 1540, 1962, 2544, 2618, 3300, 3341, 3396, 3435
BseNI ACTGG 9 cut(s) 698, 1567, 1587, 1712, 2187, 2526, 2613, 2727, 3600
BseRI GAGGAG 1 cut(s) 2238
BseXI GCAGC 7 cut(s) 406, 1860, 2378, 2405, 2657, 2690, 2723
BsgI GTGCAG 2 cut(s) 2623, 2689
Bsh1236I CGCG 2 cut(s) 2999, 3950
BshFI GGCC 7 cut(s) 251, 1908, 2482, 2775, 3009, 3019, 3624
BshNI GGYRCC 2 cut(s) 1607, 3184
BshVI ATCGAT 1 cut(s) 3384
BsiSI CCGG 4 cut(s) 863, 1496, 2324, 2381
BslFI GGGAC 5 cut(s) 188, 2322, 2550, 2958, 3909
BslI CCNNNNNNNGG 8 cut(s) 226, 633, 1904, 2160, 2558, 2771, 3264, 3759
BsmBI CGTCTC 2 cut(s) 1391, 2324
BsmFI GGGAC 5 cut(s) 188, 2322, 2550, 2958, 3909
BsmI GAATGC 2 cut(s) 1666, 2068
BsnI GGCC 7 cut(s) 251, 1908, 2482, 2775, 3009, 3019, 3624
Bso31I GGTCTC 3 cut(s) 122, 617, 3300
Bsp13I TCCGGA 2 cut(s) 2323, 2380
Bsp19I CCATGG 3 cut(s) 106, 2404, 3263
BspANI GGCC 7 cut(s) 251, 1908, 2482, 2775, 3009, 3019, 3624
BspCNI CTCAG 9 cut(s) 375, 1539, 1963, 2545, 2617, 3301, 3342, 3397, 3436
BspDI ATCGAT 1 cut(s) 3384
BspEI TCCGGA 2 cut(s) 2323, 2380
BspFNI CGCG 2 cut(s) 2999, 3950
BspHI TCATGA 1 cut(s) 304
BspLI GGNNCC 4 cut(s) 392, 1609, 2566, 3186
BspMI ACCTGC 1 cut(s) 47
BspPI GGATC 4 cut(s) 385, 398, 2815, 3354
BspQI GCTCTTC 2 cut(s) 3630, 3663
BspT107I GGYRCC 2 cut(s) 1607, 3184
BspTNI GGTCTC 3 cut(s) 122, 617, 3300
BsrBI CCGCTC 2 cut(s) 1200, 3006
BsrDI GCAATG 3 cut(s) 826, 2394, 3582
BsrI ACTGG 9 cut(s) 698, 1567, 1587, 1712, 2187, 2526, 2613, 2727, 3600
BssECI CCNNGG 7 cut(s) 106, 568, 1212, 2404, 2997, 3263, 3612
BssNI GRCGYC 1 cut(s) 3743
BssSI CACGAG 1 cut(s) 3546
BssT1I CCWWGG 6 cut(s) 106, 568, 1212, 2404, 3263, 3612
Bst2BI CACGAG 1 cut(s) 3546
Bst2UI CCWGG 2 cut(s) 395, 3304
Bst4CI ACNGT 6 cut(s) 774, 2378, 3170, 3402, 3417, 3512
BstACI GRCGYC 1 cut(s) 3743
BstAPI GCANNNNNTGC 2 cut(s) 1661, 1884
BstBAI YACGTR 2 cut(s) 1259, 3592
BstC8I GCNNGC 5 cut(s) 548, 1846, 2773, 3396, 3483
BstDSI CCRYGG 4 cut(s) 106, 2404, 2997, 3263
BstENI CCTNNNNNAGG 1 cut(s) 2556
BstFNI CGCG 2 cut(s) 2999, 3950
BstHHI GCGC 6 cut(s) 807, 2185, 2423, 2580, 3131, 3349
BstMWI GCNNNNNNNGC 7 cut(s) 428, 437, 1593, 1661, 1884, 2584, 2991
BstNI CCWGG 2 cut(s) 395, 3304
BstNSI RCATGY 5 cut(s) 1140, 1469, 1637, 1931, 1948
BstPAI GACNNNNGTC 1 cut(s) 1177
BstSCI CCNGG 2 cut(s) 393, 3302
BstSFI CTRYAG 3 cut(s) 432, 2244, 3234
BstUI CGCG 2 cut(s) 2999, 3950
BstV1I GCAGC 7 cut(s) 406, 1860, 2378, 2405, 2657, 2690, 2723
BstV2I GAAGAC 2 cut(s) 1110, 2312
BstX2I RGATCY 3 cut(s) 390, 1250, 2807
BstYI RGATCY 3 cut(s) 390, 1250, 2807
Bsu15I ATCGAT 1 cut(s) 3384
Bsu36I CCTNAGG 1 cut(s) 1955
BsuRI GGCC 7 cut(s) 251, 1908, 2482, 2775, 3009, 3019, 3624
BsuTUI ATCGAT 1 cut(s) 3384
BtgI CCRYGG 4 cut(s) 106, 2404, 2997, 3263
BtrI CACGTC 1 cut(s) 2149
BtsI GCAGTG 2 cut(s) 604, 1662
BtsIMutI CAGTG 3 cut(s) 604, 1662, 3175
BveI ACCTGC 1 cut(s) 47
Cac8I GCNNGC 5 cut(s) 548, 1846, 2773, 3396, 3483
CaiI CAGNNNCTG 1 cut(s) 3491
CciI TCATGA 1 cut(s) 304
CfoI GCGC 6 cut(s) 807, 2185, 2423, 2580, 3131, 3349
Cfr13I GGNCC 7 cut(s) 1565, 1906, 2480, 2564, 2773, 3008, 3623
Cfr42I CCGCGG 1 cut(s) 3000
ClaI ATCGAT 1 cut(s) 3384
Csp6I GTAC 5 cut(s) 770, 788, 1754, 2294, 3536
CviQI GTAC 5 cut(s) 770, 788, 1754, 2294, 3536
DraI TTTAAA 2 cut(s) 894, 1405
DrdI GACNNNNNNGTC 1 cut(s) 2316
DseDI GACNNNNNNGTC 1 cut(s) 2316
EaeI YGGCCR 1 cut(s) 249
Eco130I CCWWGG 6 cut(s) 106, 568, 1212, 2404, 3263, 3612
Eco31I GGTCTC 3 cut(s) 122, 617, 3300
Eco47I GGWCC 2 cut(s) 1565, 2564
Eco57I CTGAAG 3 cut(s) 1565, 3644, 3725
Eco81I CCTNAGG 1 cut(s) 1955
EcoNI CCTNNNNNAGG 1 cut(s) 2556
EcoRI GAATTC 1 cut(s) 1300
EcoRII CCWGG 2 cut(s) 393, 3302
EcoT14I CCWWGG 6 cut(s) 106, 568, 1212, 2404, 3263, 3612
EcoT22I ATGCAT 1 cut(s) 3563
ErhI CCWWGG 6 cut(s) 106, 568, 1212, 2404, 3263, 3612
Esp3I CGTCTC 2 cut(s) 1391, 2324
FalI AAGNNNNNCTT 6 cut(s) 530, 562, 974, 1006, 1005, 1037
FaqI GGGAC 5 cut(s) 188, 2322, 2550, 2958, 3909
FauI CCCGC 3 cut(s) 602, 1580, 2764
FbaI TGATCA 2 cut(s) 1452, 3370
FblI GTMKAC 2 cut(s) 1720, 3449
Fnu4HI GCNGC 9 cut(s) 420, 1198, 1849, 2392, 2419, 2671, 2704, 2737, 3007
Fsp4HI GCNGC 9 cut(s) 420, 1198, 1849, 2392, 2419, 2671, 2704, 2737, 3007
FspBI CTAG 6 cut(s) 78, 791, 1569, 2316, 2531, 3062
FspI TGCGCA 2 cut(s) 2422, 2579
GlaI GCGC 6 cut(s) 806, 2184, 2422, 2579, 3130, 3348
GluI GCNGC 9 cut(s) 420, 1198, 1849, 2392, 2419, 2671, 2704, 2737, 3007
GsuI CTGGAG 2 cut(s) 1649, 2509
HaeIII GGCC 7 cut(s) 251, 1908, 2482, 2775, 3009, 3019, 3624
HapII CCGG 4 cut(s) 863, 1496, 2324, 2381
HhaI GCGC 6 cut(s) 807, 2185, 2423, 2580, 3131, 3349
Hin1I GRCGYC 1 cut(s) 3743
Hin6I GCGC 6 cut(s) 805, 2183, 2421, 2578, 3129, 3347
HinP1I GCGC 6 cut(s) 805, 2183, 2421, 2578, 3129, 3347
HincII GTYRAC 2 cut(s) 1698, 1738
HindII GTYRAC 2 cut(s) 1698, 1738
HindIII AAGCTT 1 cut(s) 1712
HpaII CCGG 4 cut(s) 863, 1496, 2324, 2381
HphI GGTGA 7 cut(s) 436, 1016, 2227, 2932, 3589, 3815, 3883
Hpy166II GTNNAC 7 cut(s) 770, 1357, 1698, 1721, 1738, 2618, 3450
Hpy8I GTNNAC 7 cut(s) 770, 1357, 1698, 1721, 1738, 2618, 3450
HpyCH4III ACNGT 6 cut(s) 774, 2378, 3170, 3402, 3417, 3512
HpyCH4IV ACGT 8 cut(s) 1107, 1258, 1400, 2148, 2333, 2684, 3591, 3743
HpyF10VI GCNNNNNNNGC 7 cut(s) 428, 437, 1593, 1661, 1884, 2584, 2991
HpySE526I ACGT 8 cut(s) 1107, 1258, 1400, 2148, 2333, 2684, 3591, 3743
Hsp92I GRCGYC 1 cut(s) 3743
HspAI GCGC 6 cut(s) 805, 2183, 2421, 2578, 3129, 3347
Kpn2I TCCGGA 2 cut(s) 2323, 2380
Ksp22I TGATCA 2 cut(s) 1452, 3370
KspI CCGCGG 1 cut(s) 3000
LguI GCTCTTC 2 cut(s) 3630, 3663
LmnI GCTCC 6 cut(s) 1630, 2404, 2528, 2667, 2733, 3391
Lsp1109I GCAGC 7 cut(s) 406, 1860, 2378, 2405, 2657, 2690, 2723
MaeI CTAG 6 cut(s) 78, 791, 1569, 2316, 2531, 3062
MaeII ACGT 8 cut(s) 1107, 1258, 1400, 2148, 2333, 2684, 3591, 3743
MaeIII GTNAC 5 cut(s) 586, 1982, 2012, 2149, 3375
MbiI CCGCTC 2 cut(s) 1200, 3006
MfeI CAATTG 5 cut(s) 1305, 2171, 2968, 3244, 3919
MflI RGATCY 3 cut(s) 390, 1250, 2807
MlsI TGGCCA 1 cut(s) 251
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 7 cut(s) 1693, 2543, 3337, 3361, 3455, 3497, 3539
MmeI TCCRAC 6 cut(s) 681, 682, 1021, 2487, 3046, 3501
Mox20I TGGCCA 1 cut(s) 251
Mph1103I ATGCAT 1 cut(s) 3563
MroI TCCGGA 2 cut(s) 2323, 2380
MroXI GAANNNNTTC 3 cut(s) 1117, 1893, 3729
MscI TGGCCA 1 cut(s) 251
MslI CAYNNNNRTG 2 cut(s) 32, 3471
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 1 cut(s) 2999
MspI CCGG 4 cut(s) 863, 1496, 2324, 2381
MspR9I CCNGG 2 cut(s) 395, 3304
MunI CAATTG 5 cut(s) 1305, 2171, 2968, 3244, 3919
Mva1269I GAATGC 2 cut(s) 1666, 2068
MvaI CCWGG 2 cut(s) 395, 3304
MvnI CGCG 2 cut(s) 2999, 3950
MwoI GCNNNNNNNGC 7 cut(s) 428, 437, 1593, 1661, 1884, 2584, 2991
NcoI CCATGG 3 cut(s) 106, 2404, 3263
NlaIV GGNNCC 4 cut(s) 392, 1609, 2566, 3186
NmeAIII GCCGAG 1 cut(s) 2092
NmuCI GTSAC 3 cut(s) 2012, 2149, 3375
NsbI TGCGCA 2 cut(s) 2422, 2579
NsiI ATGCAT 1 cut(s) 3563
NspI RCATGY 5 cut(s) 1140, 1469, 1637, 1931, 1948
PagI TCATGA 1 cut(s) 304
PaqCI CACCTGC 1 cut(s) 47
PciI ACATGT 2 cut(s) 1465, 1927
PciSI GCTCTTC 2 cut(s) 3630, 3663
PctI GAATGC 2 cut(s) 1666, 2068
PdmI GAANNNNTTC 3 cut(s) 1117, 1893, 3729
PflFI GACNNNGTC 1 cut(s) 992
PflMI CCANNNNNTGG 1 cut(s) 226
PfoI TCCNGGA 1 cut(s) 393
PkrI GCNGC 9 cut(s) 421, 1199, 1850, 2393, 2420, 2672, 2705, 2738, 3008
PleI GAGTC 7 cut(s) 1693, 2542, 3336, 3360, 3454, 3496, 3538
PpsI GAGTC 7 cut(s) 1693, 2542, 3336, 3360, 3454, 3496, 3538
Ppu21I YACGTR 2 cut(s) 1259, 3592
PscI ACATGT 2 cut(s) 1465, 1927
PshAI GACNNNNGTC 1 cut(s) 1177
Psp6I CCWGG 2 cut(s) 393, 3302
PspGI CCWGG 2 cut(s) 393, 3302
PspN4I GGNNCC 4 cut(s) 392, 1609, 2566, 3186
PspPI GGNCC 7 cut(s) 1565, 1906, 2480, 2564, 2773, 3008, 3623
PstNI CAGNNNCTG 1 cut(s) 3491
PsuI RGATCY 3 cut(s) 390, 1250, 2807
PsyI GACNNNGTC 1 cut(s) 992
RsaI GTAC 5 cut(s) 771, 789, 1755, 2295, 3537
RsaNI GTAC 5 cut(s) 770, 788, 1754, 2294, 3536
RseI CAYNNNNRTG 2 cut(s) 32, 3471
SacII CCGCGG 1 cut(s) 3000
SapI GCTCTTC 2 cut(s) 3630, 3663
SatI GCNGC 9 cut(s) 420, 1198, 1849, 2392, 2419, 2671, 2704, 2737, 3007
Sau96I GGNCC 7 cut(s) 1565, 1906, 2480, 2564, 2773, 3008, 3623
SchI GAGTC 7 cut(s) 1693, 2543, 3337, 3361, 3455, 3497, 3539
ScrFI CCNGG 2 cut(s) 395, 3304
SfcI CTRYAG 3 cut(s) 432, 2244, 3234
Sfr303I CCGCGG 1 cut(s) 3000
SgrBI CCGCGG 1 cut(s) 3000
SinI GGWCC 2 cut(s) 1565, 2564
SmiMI CAYNNNNRTG 2 cut(s) 32, 3471
SmlI CTYRAG 9 cut(s) 1011, 1324, 1394, 1459, 2141, 2204, 2498, 3605, 3710
SmoI CTYRAG 9 cut(s) 1011, 1324, 1394, 1459, 2141, 2204, 2498, 3605, 3710
SpeI ACTAGT 2 cut(s) 2315, 3061
SspI AATATT 2 cut(s) 1070, 1902
SspMI CTAG 6 cut(s) 78, 791, 1569, 2316, 2531, 3062
StyD4I CCNGG 2 cut(s) 393, 3302
StyI CCWWGG 6 cut(s) 106, 568, 1212, 2404, 3263, 3612
TaaI ACNGT 6 cut(s) 774, 2378, 3170, 3402, 3417, 3512
TaiI ACGT 8 cut(s) 1110, 1261, 1403, 2151, 2336, 2687, 3594, 3746
TaqI TCGA 5 cut(s) 953, 1704, 2304, 3358, 3384
TatI WGTACW 2 cut(s) 1753, 2293
TauI GCSGC 2 cut(s) 1200, 3009
TscAI CASTG 3 cut(s) 604, 1662, 3175
TseFI GTSAC 3 cut(s) 2012, 2149, 3375
TseI GCWGC 7 cut(s) 419, 1848, 2391, 2418, 2670, 2703, 2736
Tsp45I GTSAC 3 cut(s) 2012, 2149, 3375
TspGWI ACGGA 4 cut(s) 2680, 2879, 2908, 3859
TspRI CASTG 3 cut(s) 604, 1662, 3175
Tth111I GACNNNGTC 1 cut(s) 992
Van91I CCANNNNNTGG 1 cut(s) 226
VpaK11BI GGWCC 2 cut(s) 1565, 2564
XagI CCTNNNNNAGG 1 cut(s) 2556
XapI RAATTY 5 cut(s) 956, 1267, 1300, 1788, 3729
XbaI TCTAGA 1 cut(s) 2530
XceI RCATGY 5 cut(s) 1140, 1469, 1637, 1931, 1948
XcmI CCANNNNNNNNNTGG 3 cut(s) 259, 1039, 3261
XmiI GTMKAC 2 cut(s) 1720, 3449
XmnI GAANNNNTTC 3 cut(s) 1117, 1893, 3729
XspI CTAG 6 cut(s) 78, 791, 1569, 2316, 2531, 3062
ZraI GACGTC 1 cut(s) 3744
Zsp2I ATGCAT 1 cut(s) 3563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.