pycom03g03910

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
3095043 .. 3096299
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g03910.1

Sequence Viewer

Length: 1257 bp
ATGTTCAAGAAAGATTCTATAATTCAAAAAGATAACTTGATTCAACTTTGGATGGCTCAAGGACTACTCCATCCTTCGCCTAGCAAAAGTAAAGATATGGAGGACATAGGCGATGAATATTTTAATATTCTATTTCATAGCTCCTTATTTCAAGATGCTTCAATGAGTGACAAAGACATTGTTAGCATATTCCAGATGCACGATCTTGTGCACGACCTTGCAGAACATGTATCTAAATCAGAAAGCTTGACGGGAGACTTATGTGGCATAGATAATACAAATGAGATTCGACATGTTGCTCGGGTTTCTACTTCTATGCTAGATAAAATTCCAGAAAGAAGTGCTAAGAAATTGCGGTCAGTGTTTTTCGACGATGGTGAAGTTCCTAGTAACATTCTTCCACGATTCAAAGCTTTACGTGTCTTAAATTTCAGTAATGCTAAGATTGAAGAATTTCCGGTTTCAGTTGGAAGGTTGAAACACTTGAGGTATCTTAACATTTCTAAAACAAGATTCAAAGAACTCCCCAAATCTGTAGGCAAGCTCTATAACCTACAGACTTTAAGAGCAACAAATTGTGCCCTTGAGGAGTTTCCAAAAGAGCTGCAAAACTTGATCGACCTAAGGCATATTTATTTTGATATGAGTACAAAATTCCCCCAGGGGATAAGTCGGCTAACATGCCTTCGAACATTACCTTACTTTTCGGTGGGTAATGAGACTGGTCGTCAAATTGAAGAGTTGGCTGACCTGAAACATTTGAGAGGTAAATTAATTGTTTGTAATTTGGAGCACGTAAAGAATGGAGAAGAAGCAAAGAAAGCTAAGTTGGAGGATAAGACGAAAATATGCCATTTAAGCTTCAAATGGATAGAAGATTGGTCAATAACCAACAACAATGAACAGGGGGATATACTGGAAGGCCTCCGACCGCATCCTGGGTTGGAGAGCTTACGTATTGAAAACTTCATGGGTGATGAGTTTCCATCGTGGATGATGAGTGGGTCATTATTACTCAACAACTTGAAGAAGATTAAGTTACTTGGATGCGACAAATGTGAAGTAGTCCCACCGCTTGGTCATCTACCTAAACTTACGGTGCTTGGGATTAGCGGAATGGCTAACTTGAAATGTATTGGAGTTGAGTTCTACGGTTATGATCTTGTCCACAATGTAGCCACGACAAGTAAAGAGATAATTACTTTATTTCCTGCACTAAAAAAATTAAATATTTCTAACTGCGATCGATCTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

419

Amino Acids

47.54

Weight (kDa)

7.62

Isoelectric Point (pI)

49.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 1 - 74 2e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 118 - 376 7.1e-36 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 245 - 373 1.8e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1076
AciI CCGC 4 cut(s) 355, 932, 1073, 1113
AcsI RAATTY 4 cut(s) 327, 427, 452, 653
AfaI GTAC 1 cut(s) 649
AfiI CCNNNNNNNGG 2 cut(s) 938, 1076
AflIII ACRYGT 3 cut(s) 226, 292, 418
AhdI GACNNNNNGTC 1 cut(s) 726
AjnI CCWGG 2 cut(s) 660, 937
AjuI GAANNNNNNNTTGG 2 cut(s) 812, 844
AluBI AGCT 8 cut(s) 141, 246, 413, 544, 604, 824, 861, 951
AluI AGCT 8 cut(s) 141, 246, 413, 544, 604, 824, 861, 951
Alw21I GWGCWC 2 cut(s) 213, 795
Alw26I GTCTC 2 cut(s) 249, 713
Alw44I GTGCAC 1 cut(s) 209
Ama87I CYCGRG 1 cut(s) 300
AoxI GGCC 1 cut(s) 922
ApaLI GTGCAC 1 cut(s) 209
ApeKI GCWGC 1 cut(s) 604
ApoI RAATTY 4 cut(s) 327, 427, 452, 653
AseI ATTAAT 1 cut(s) 773
Asp700I GAANNNNTTC 1 cut(s) 453
AsuHPI GGTGA 2 cut(s) 389, 986
AsuII TTCGAA 1 cut(s) 688
AvaI CYCGRG 1 cut(s) 300
AxyI CCTNAGG 1 cut(s) 623
BaeGI GKGCMC 2 cut(s) 213, 583
Bbv12I GWGCWC 2 cut(s) 213, 795
BbvI GCAGC 1 cut(s) 591
BccI CCATC 4 cut(s) 46, 78, 368, 994
BciT130I CCWGG 2 cut(s) 662, 939
BcoDI GTCTC 2 cut(s) 249, 713
BfaI CTAG 3 cut(s) 81, 320, 387
BfmI CTRYAG 2 cut(s) 534, 554
BisI GCNGC 1 cut(s) 605
BlsI GCNGC 1 cut(s) 606
Bme1390I CCNGG 2 cut(s) 662, 939
BmeRI GACNNNNNGTC 1 cut(s) 726
BmeT110I CYCGRG 1 cut(s) 300
BmrFI CCNGG 2 cut(s) 662, 939
BmsI GCATC 4 cut(s) 145, 186, 943, 1037
Bpu14I TTCGAA 1 cut(s) 688
BpuEI CTTGAG 3 cut(s) 42, 505, 605
Bsa29I ATCGAT 1 cut(s) 1246
BsaAI YACGTR 3 cut(s) 419, 796, 956
BsaJI CCNNGG 3 cut(s) 660, 661, 938
BsaWI WCCGGW 1 cut(s) 457
Bsc4I CCNNNNNNNGG 2 cut(s) 938, 1076
Bse1I ACTGG 2 cut(s) 727, 921
Bse21I CCTNAGG 1 cut(s) 623
BseBI CCWGG 2 cut(s) 662, 939
BseCI ATCGAT 1 cut(s) 1246
BseDI CCNNGG 3 cut(s) 660, 661, 938
BseGI GGATG 5 cut(s) 57, 70, 934, 999, 1052
BseLI CCNNNNNNNGG 2 cut(s) 938, 1076
BseNI ACTGG 2 cut(s) 727, 921
BseRI GAGGAG 1 cut(s) 602
BseSI GKGCMC 2 cut(s) 213, 583
BseXI GCAGC 1 cut(s) 591
BsgI GTGCAG 1 cut(s) 1197
Bsh1285I CGRYCG 2 cut(s) 932, 1246
BshFI GGCC 1 cut(s) 924
BshVI ATCGAT 1 cut(s) 1246
BsiEI CGRYCG 2 cut(s) 932, 1246
BsiHKAI GWGCWC 2 cut(s) 213, 795
BsiHKCI CYCGRG 1 cut(s) 300
BsiSI CCGG 1 cut(s) 458
BslFI GGGAC 1 cut(s) 1052
BslI CCNNNNNNNGG 2 cut(s) 938, 1076
BsmAI GTCTC 2 cut(s) 249, 713
BsmFI GGGAC 1 cut(s) 1052
BsnI GGCC 1 cut(s) 924
BsoBI CYCGRG 1 cut(s) 300
Bsp119I TTCGAA 1 cut(s) 688
Bsp1286I GDGCHC 3 cut(s) 213, 583, 795
Bsp143I GATC 5 cut(s) 202, 615, 1159, 1243, 1247
BspACI CCGC 4 cut(s) 355, 932, 1073, 1113
BspANI GGCC 1 cut(s) 924
BspDI ATCGAT 1 cut(s) 1246
BspT104I TTCGAA 1 cut(s) 688
BsrI ACTGG 2 cut(s) 727, 921
BssECI CCNNGG 3 cut(s) 660, 661, 938
BssMI GATC 5 cut(s) 202, 615, 1159, 1243, 1247
Bst2UI CCWGG 2 cut(s) 662, 939
Bst4CI ACNGT 2 cut(s) 1099, 1154
Bst6I CTCTTC 1 cut(s) 732
BstBAI YACGTR 3 cut(s) 419, 796, 956
BstBI TTCGAA 1 cut(s) 688
BstC8I GCNNGC 1 cut(s) 542
BstDEI CTNAG 4 cut(s) 345, 441, 623, 825
BstF5I GGATG 5 cut(s) 57, 70, 934, 999, 1052
BstKTI GATC 5 cut(s) 205, 618, 1162, 1246, 1250
BstMAI GTCTC 2 cut(s) 249, 713
BstMBI GATC 5 cut(s) 202, 615, 1159, 1243, 1247
BstMCI CGRYCG 2 cut(s) 932, 1246
BstMWI GCNNNNNNNGC 2 cut(s) 821, 858
BstNI CCWGG 2 cut(s) 662, 939
BstNSI RCATGY 3 cut(s) 230, 296, 684
BstSCI CCNGG 2 cut(s) 660, 937
BstSFI CTRYAG 2 cut(s) 534, 554
BstSLI GKGCMC 2 cut(s) 213, 583
BstSNI TACGTA 1 cut(s) 956
BstV1I GCAGC 1 cut(s) 591
Bsu15I ATCGAT 1 cut(s) 1246
Bsu36I CCTNAGG 1 cut(s) 623
BsuRI GGCC 1 cut(s) 924
BsuTUI ATCGAT 1 cut(s) 1246
BtgZI GCGATG 1 cut(s) 126
BtsCI GGATG 5 cut(s) 57, 70, 934, 999, 1052
BtsIMutI CAGTG 1 cut(s) 366
Cac8I GCNNGC 1 cut(s) 542
ClaI ATCGAT 1 cut(s) 1246
Csp6I GTAC 1 cut(s) 648
CviAII CATG 4 cut(s) 227, 293, 681, 970
CviQI GTAC 1 cut(s) 648
DdeI CTNAG 4 cut(s) 345, 441, 623, 825
DpnI GATC 5 cut(s) 204, 617, 1161, 1245, 1249
DpnII GATC 5 cut(s) 202, 615, 1159, 1243, 1247
DriI GACNNNNNGTC 1 cut(s) 726
Eam1104I CTCTTC 1 cut(s) 732
Eam1105I GACNNNNNGTC 1 cut(s) 726
EarI CTCTTC 1 cut(s) 732
Eco105I TACGTA 1 cut(s) 956
Eco147I AGGCCT 1 cut(s) 924
Eco81I CCTNAGG 1 cut(s) 623
Eco88I CYCGRG 1 cut(s) 300
EcoRII CCWGG 2 cut(s) 660, 937
FaeI CATG 4 cut(s) 230, 296, 684, 973
FaqI GGGAC 1 cut(s) 1052
FatI CATG 4 cut(s) 226, 292, 680, 969
Fnu4HI GCNGC 1 cut(s) 605
FokI GGATG 5 cut(s) 57, 64, 921, 1006, 1059
Fsp4HI GCNGC 1 cut(s) 605
FspBI CTAG 3 cut(s) 81, 320, 387
GluI GCNGC 1 cut(s) 605
HaeIII GGCC 1 cut(s) 924
HapII CCGG 1 cut(s) 458
Hin1II CATG 4 cut(s) 230, 296, 684, 973
HindIII AAGCTT 3 cut(s) 244, 411, 859
HinfI GANTC 5 cut(s) 14, 40, 286, 405, 513
HpaII CCGG 1 cut(s) 458
HphI GGTGA 2 cut(s) 389, 986
Hpy166II GTNNAC 2 cut(s) 211, 1168
Hpy188I TCNGA 2 cut(s) 241, 929
Hpy188III TCNNGA 4 cut(s) 7, 152, 193, 332
Hpy8I GTNNAC 2 cut(s) 211, 1168
Hpy99I CGWCG 1 cut(s) 374
HpyAV CCTTC 4 cut(s) 84, 465, 695, 914
HpyCH4III ACNGT 2 cut(s) 1099, 1154
HpyCH4IV ACGT 3 cut(s) 418, 795, 955
HpyCH4V TGCA 5 cut(s) 199, 211, 221, 607, 1214
HpyF10VI GCNNNNNNNGC 2 cut(s) 821, 858
HpyF3I CTNAG 4 cut(s) 345, 441, 623, 825
HpySE526I ACGT 3 cut(s) 418, 795, 955
Hsp92II CATG 4 cut(s) 230, 296, 684, 973
Kzo9I GATC 5 cut(s) 202, 615, 1159, 1243, 1247
LmnI GCTCC 2 cut(s) 146, 790
Lsp1109I GCAGC 1 cut(s) 591
LweI GCATC 4 cut(s) 145, 186, 943, 1037
MaeI CTAG 3 cut(s) 81, 320, 387
MaeII ACGT 3 cut(s) 418, 795, 955
MaeIII GTNAC 3 cut(s) 167, 389, 1038
MalI GATC 5 cut(s) 204, 617, 1161, 1245, 1249
MboI GATC 5 cut(s) 202, 615, 1159, 1243, 1247
MboII GAAGA 7 cut(s) 389, 461, 749, 821, 887, 1039, 1042
MhlI GDGCHC 3 cut(s) 213, 583, 795
MmeI TCCRAC 4 cut(s) 448, 810, 924, 952
MnlI CCTC 6 cut(s) 94, 480, 580, 758, 826, 935
MroXI GAANNNNTTC 1 cut(s) 453
MseI TTAA 8 cut(s) 123, 425, 495, 563, 773, 857, 1035, 1226
MspI CCGG 1 cut(s) 458
MspR9I CCNGG 2 cut(s) 662, 939
MvaI CCWGG 2 cut(s) 662, 939
MwoI GCNNNNNNNGC 2 cut(s) 821, 858
NdeII GATC 5 cut(s) 202, 615, 1159, 1243, 1247
NlaIII CATG 4 cut(s) 230, 296, 684, 973
NmuCI GTSAC 1 cut(s) 167
NspI RCATGY 3 cut(s) 230, 296, 684
NspV TTCGAA 1 cut(s) 688
PasI CCCWGGG 1 cut(s) 661
PceI AGGCCT 1 cut(s) 924
PciI ACATGT 2 cut(s) 226, 292
PdmI GAANNNNTTC 1 cut(s) 453
PfeI GAWTC 5 cut(s) 14, 40, 286, 405, 513
PflMI CCANNNNNTGG 1 cut(s) 1076
PkrI GCNGC 1 cut(s) 606
Ple19I CGATCG 1 cut(s) 1246
Ppu21I YACGTR 3 cut(s) 419, 796, 956
PscI ACATGT 2 cut(s) 226, 292
PshBI ATTAAT 1 cut(s) 773
Psp6I CCWGG 2 cut(s) 660, 937
PspGI CCWGG 2 cut(s) 660, 937
PvuI CGATCG 1 cut(s) 1246
RsaI GTAC 1 cut(s) 649
RsaNI GTAC 1 cut(s) 648
SaqAI TTAA 8 cut(s) 123, 425, 495, 563, 773, 857, 1035, 1226
SatI GCNGC 1 cut(s) 605
Sau3AI GATC 5 cut(s) 202, 615, 1159, 1243, 1247
ScrFI CCNGG 2 cut(s) 662, 939
SduI GDGCHC 3 cut(s) 213, 583, 795
SfaNI GCATC 4 cut(s) 145, 186, 943, 1037
SfcI CTRYAG 2 cut(s) 534, 554
SfuI TTCGAA 1 cut(s) 688
SmlI CTYRAG 3 cut(s) 57, 484, 584
SmoI CTYRAG 3 cut(s) 57, 484, 584
SnaBI TACGTA 1 cut(s) 956
SseBI AGGCCT 1 cut(s) 924
SsiI CCGC 4 cut(s) 355, 932, 1073, 1113
SspI AATATT 3 cut(s) 119, 127, 1231
SspMI CTAG 3 cut(s) 81, 320, 387
StuI AGGCCT 1 cut(s) 924
StyD4I CCNGG 2 cut(s) 660, 937
TaaI ACNGT 2 cut(s) 1099, 1154
TaiI ACGT 3 cut(s) 421, 798, 958
TaqI TCGA 5 cut(s) 289, 369, 618, 688, 1246
TatI WGTACW 1 cut(s) 647
TfiI GAWTC 5 cut(s) 14, 40, 286, 405, 513
Tru1I TTAA 8 cut(s) 123, 425, 495, 563, 773, 857, 1035, 1226
Tru9I TTAA 8 cut(s) 123, 425, 495, 563, 773, 857, 1035, 1226
TscAI CASTG 1 cut(s) 366
TseFI GTSAC 1 cut(s) 167
TseI GCWGC 1 cut(s) 604
Tsp45I GTSAC 1 cut(s) 167
TspDTI ATGAA 4 cut(s) 125, 129, 915, 958
TspRI CASTG 1 cut(s) 366
Van91I CCANNNNNTGG 1 cut(s) 1076
VneI GTGCAC 1 cut(s) 209
VspI ATTAAT 1 cut(s) 773
XapI RAATTY 4 cut(s) 327, 427, 452, 653
XceI RCATGY 3 cut(s) 230, 296, 684
XmnI GAANNNNTTC 1 cut(s) 453
XspI CTAG 3 cut(s) 81, 320, 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.