FvH4_6g13450

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
8161551 .. 8170244
8694 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g13450.t1

Sequence Viewer

Length: 3858 bp
ATGGCTGAGTTTCTTACTTTTGCTGCCCAGGAATTGCTGAAAAAAGTGGCTTCACTTGCCACTCAAGAGTTCACTCTTCTATGGGGATTCGAGGGAGAATTGGCAAATCTGCGTGACTCACTGCTCTTTCTTGAAGCTGTGCTACGAGATGCGGAACAAAAGCAACAAGATCAGGGCGAGGCTGCCAAGCTCTGGTTGGCGAAGTTGGAAGACATAGCTCATCTTGCCGATGATGTGTTAGATGACTACGGGTATGAGCTTCTCCGGCGTAAGGTGGAACTGCGAAACCAGATAAAGAAAAAGGTGCTAAACTTCTTTTCCCTCTCCAATCCCATTGTATTTCGTGTTAAAATGACACAGAGAATTAAAAAAATCAACACTTCTCTGGAGGATTTGGGTAAAAGGGCAACTGGGTTCGGGTTTGTTGATAGGCCTCCCTTGGAGGCACCAAGCTCATATGACAGAAGAATCGATAGGGAAACCTACTCTGATTTCAAAATAGACGAAAACATTATCATTGGAAGGGAAGATCTTGTGAAAGATATAGTGAAAGACTTGACTAACTCAAACAACAATAAGGAAAATGATCTTTCAGTTCTGGCCGTTGTGGGAATGGGAGGACTTGGGAAGACCACTTTGGCTAAATCTGTATATCATGATGACATAATAGAGCAACATTTTCAACAGAAAATATGGGTTTGTGTATCTACACCATTTGAAGTCAAGTCAATTTTAAGGGGGATTTTGGAGTCTCTTCAACCTGCTGCAGTGCAAACTATAGAGGGAATATGCATAATCCTTAAAAAGGAGTTGAAAGAGAAGAGGTATTTACTCGTGCTCGATGATGTTTGGAACGAAGATGCTCAAAAATGGGAAGAATTGATGGGTTGCTTGGTAAACATCACTGATAGCCAGGGAAGCAGCATCCTTGTCACCACCCGCAGCGACAAAGTTGCAAAAATTGTGGAGACTGTTCCTAGACGTGATTTGAAGAAACTAACAGATGATGAATGTTGGCTCGTCCTGAAGGACCGAGCATTTCCAGTTGGGAGTGATTCTATTACTGAAGATCAAGAAAATATCGGCAGGGAGATCGCTAAAAAGTGCGGAGGTGTACCATTACTAGCAAAGGTGTTGGGAAATATGATGCGTTCTAAAAAGTTTGATGAATGGCAATCACTTGTGGAAAGTGGTATATGGAAATTACCGGAGGCAGAAAGCAGAATAATGGCAATTTTGAAATTGAGTTTTGATGAATTGAAATCTCCATCATTAAAACAGTGTTTTGCGTACTGCTCCATGTTCATTAAAGATTCTCAACTTCAAAAGGACGACTTGATCCAACTTTGGATGGCTCAAGGATGGCTTCAAGAGATGGAGGACCAAGGTAATGAATATTTTAATATTCTGTTACAGAACTCATTCTTTCAAGACGTGATAAGAGATTATCTCTATGGTGATATAATCGCATGCAAGATGCACGATCTCGTTCATGATCTAGCTGAACATGTTTCAAAGTCGAAGCACTTCCGCTCCTCATTTTCCTGTGAAACCCTCATTGACAACAACTTAGATGGATTTAAAGCTCTACGTGTTTTGAATCTACACAAGGCAGACATTCAGGAGTTGCCAGATTCATTAGGAAAGTTGAAACACTTGAGGTATTTAAATGTTATGGGAACAAAGATCAGAGCATTTCCCAAATCATTGGGTCAGCTTTTTAACCTTCAGACACTTAAAATGCCTGACCGCCTTGAAGAATTCCCCAAGGAAATTGCAAATTTGATCAACTTGCGACATATTTACTTCGGTAGACGTGTGAAAGTTCCAGCCAGGGTATTGGGAAGATTGACTAATCTCCGATCATTACCTTTTGTAAAGTTGGGCAAGGAGACGGCACCTCAAATTGGAGAATTAGGTGGCCTAAACCATCTGACACTCAGAATATCTATTCAAAATTTGGAACATGTTGCAGATAAAGAAGAGGCAGAGAAGGCCAATTTAATGGACAAGAAACATGTACGCAGGTTATTCCTTGGATGGACGCCTAGTAGGCCAAGCAACAGTGCTGTCAGTGACGAAGTTGTACTTGAAGTCCTGCGACCACATTCTAATCTGGAATTTTTGGAGATTCATGGATTCATGGGTGTTAAATTTCCATCATGGTTATTGTTATGCACAAACTTAAAGGAGATTGAATTAAGAAGTTGCAGCAACTGCGAAGGAGTCCCACTACTTGGCCGTTTGCCCAATCTTGTACGTGTGAAGATGGAAGGTATGCAGAACCTCAGGTGTTTGGGATATGAGTTTTATGGTTATGATAATGTCTCTGACGATAGAAAGGTTTTGTTTCCTGCATTAAAAACATTACGCATTAGCCAGGTGAGAAACCTAGTTGAATGGATGGAAGTGCCAACGGAAAGAGTGAAGGTGTTTCCTTGCCTTGAGAAGTTGACCTTGAGAGGATGCGACCAATTAAGAAGTGCTCCCGGTCATTTTCCATCCCTGAAAAAGTTGGTGATTGAAGACATGAATAACGGAGGCATTGCAATAGCAAGTATTCTAAACAGTAGTCTGACCACTCTCAGTTATCTAAGGATAGAGAATGTGAAGGGACTTGCTTGTCTGCCGGAAAGCTTGTTAGGAAACAACAAGAATCTTTCATATTTGGAGTTACGGGGTTGTGAGGAGTTAATTTGTATTGCTCCTCCCCAATCCCACTGCTGCGCATCGCTTCAGCAACTAACAATACGGGAGTGTCCTAAGCTGAGGTGTTTACCTGATAATGGGCTATTACGCCCACTCTCTCTCCAGATGTTGGTGATACGAGAATGCCACATTCTGGAGTCCATTCCAATCCCTGAGGAAGGTAGTCTCCCATCTCTTCAAGAATTGACCATCTCTGGATGTCCTGAGTTATCCGGTCTACCTGATGGGCTTCGATACTGCAAATCTCTTCAAGAATTGGAAATAAAGAACTGCCCAAAGATAACGTCTATTCCAATTCCATCAGAGGGCCTCCCATCTCTTTTTCGACTGGTGCTTTCGCAGTTTCCTGAATTATCAAGCCTACCGAGTGGGCTAGGCTGCTGCACCTCTCTTGCTCATTTGAGAATAACAGAGTGCCCCAAGGTAACATCCATTCCAATCGACAGTCTCAGTACAACCCTCCGTGAGCTGTGTGTGAGTAATTTCGAGTCTCTTCCTAATTTAAACGGCGGCGTCACATCCCTCCGTCGATTGGAAATTGAGAAATGTGAAACTACACAAATTGATCTTCATCAATTCCCCGTCTCTCTCCAGGAGTTAAGAATAATAGAGTGTCCTAATCTAGAGACGGTTCCAAATTTAGACAAGCTCACATCCCTCCGTGACGTGTCGATTACTGATTGTTCCGGATTAACGAGTCTACCAAGTGGGTTAGCAACGGCATCCCCACAAGTATTCACCCGTCTCAAGCACTTGACACTTGGTCCGTTTTGGAAGGAGCTGGAGTCATTCCCTGCTTTTCAGGATCTACCACAACTTGGATCATTATTTATCTGCGGGTGGCCAAAGCTCAAGTCTCTGCCTGGACAAATTCGACACATGACGTCTTTGACCTATTTGTCGATAGATTCCTTTGAGGGAGTGGAGGCTATTCCAGATTGGTTGGGAAACCTTGCATCTCTTGAATACCTAGATGTGCACCGTTGCGAGAATCTGATGTATCTACCTTCCGTCCAAGCCATGCAACGCCTCACCAAATTAGATGGGCTATTCATCGGCAACTGTCCCCTTCTAAGGGAAAGATGCAGAGAGGAGAGCGGCCCAGAGTGGCCGAAGATTTCTCATATTACAGACATCACTGTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1286

Amino Acids

145.34

Weight (kDa)

6.05

Isoelectric Point (pI)

52.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 97 2.1e-21 Rx N-terminal domain
nSTAND1 PF20703 168 - 386 3.6e-06 Novel STAND NTPase 1
NB-ARC PF00931 176 - 348 6.4e-34 NB-ARC domain
WHD_DRP PF23559 434 - 501 1.5e-19 Disease resistance protein Winged helix domain
LRR_14 PF23598 514 - 796 1.2e-27 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 636 - 760 2.3e-33 R13L1/DRL21 LRRs
LRR_14 PF23598 937 - 1179 5.9e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 2622, 3607
AatII GACGTC 1 cut(s) 3596
Acc16I TGCGCA 1 cut(s) 2728
Acc36I ACCTGC 2 cut(s) 769, 2016
AccB1I GGYRCC 2 cut(s) 445, 1897
AccB7I CCANNNNNTGG 5 cut(s) 192, 2237, 2818, 2842, 3527
AccBSI CCGCTC 2 cut(s) 1533, 3807
AccI GTMKAC 3 cut(s) 1813, 2926, 3409
AccIII TCCGGA 1 cut(s) 3395
AciI CCGC 8 cut(s) 152, 940, 1107, 1531, 1750, 3219, 3546, 3807
AclWI GGATC 3 cut(s) 1333, 3522, 3538
AcoI YGGCCR 4 cut(s) 600, 2239, 3551, 3818
AcsI RAATTY 7 cut(s) 1760, 1780, 1957, 2120, 2153, 3346, 3579
AcuI CTGAAG 4 cut(s) 1046, 1086, 1712, 2720
AcyI GRCGYC 3 cut(s) 2045, 3222, 3593
AfaI GTAC 6 cut(s) 1116, 1292, 2022, 2088, 2259, 3163
AflIII ACRYGT 7 cut(s) 1507, 1591, 1816, 1966, 2017, 2260, 3375
AhdI GACNNNNNGTC 1 cut(s) 3471
AjiI CACGTC 4 cut(s) 983, 1435, 1817, 3376
AjnI CCWGG 6 cut(s) 27, 912, 1832, 2379, 3300, 3571
AjuI GAANNNNNNNTTGG 2 cut(s) 620, 652
Alw21I GWGCWC 3 cut(s) 840, 2488, 3690
Alw44I GTGCAC 1 cut(s) 3686
AlwI GGATC 3 cut(s) 1333, 3522, 3538
AlwNI CAGNNNCTG 1 cut(s) 2217
Aor13HI TCCGGA 1 cut(s) 3395
ApaLI GTGCAC 1 cut(s) 3686
ApeKI GCWGC 9 cut(s) 23, 182, 764, 921, 942, 2211, 2724, 3087, 3090
ApoI RAATTY 7 cut(s) 1760, 1780, 1957, 2120, 2153, 3346, 3579
ArsI GACNNNNNNTTYG 4 cut(s) 2978, 3010, 3548, 3580
Asp700I GAANNNNTTC 2 cut(s) 1421, 1526
AspLEI GCGC 1 cut(s) 2729
AspS9I GGNCC 5 cut(s) 1030, 1381, 3016, 3473, 3809
AsuC2I CCSGG 1 cut(s) 2490
AsuHPI GGTGA 7 cut(s) 925, 1469, 2395, 2530, 2833, 3439, 3733
AvaII GGWCC 3 cut(s) 1030, 1381, 3473
AxyI CCTNAGG 2 cut(s) 2288, 2862
BaeGI GKGCMC 2 cut(s) 3128, 3690
BalI TGGCCA 1 cut(s) 3553
BanI GGYRCC 2 cut(s) 445, 1897
BarI GAAGNNNNNNTAC 2 cut(s) 126, 158
BauI CACGAG 1 cut(s) 833
BbsI GAAGAC 3 cut(s) 216, 635, 2532
Bbv12I GWGCWC 3 cut(s) 840, 2488, 3690
BbvCI CCTCAGC 1 cut(s) 2768
BbvI GCAGC 9 cut(s) 10, 169, 751, 933, 954, 2223, 2711, 3074, 3077
BceAI ACGGC 5 cut(s) 587, 1911, 2226, 3232, 3444
BcgI CGANNNNNNTGC 4 cut(s) 935, 969, 1075, 1109
BciT130I CCWGG 6 cut(s) 29, 914, 1834, 2381, 3302, 3573
BclI TGATCA 1 cut(s) 1785
BcnI CCSGG 1 cut(s) 2490
BfaI CTAG 8 cut(s) 978, 1124, 1499, 2049, 2393, 3083, 3332, 3680
BfmI CTRYAG 2 cut(s) 765, 777
BfuAI ACCTGC 2 cut(s) 769, 2016
BglI GCCNNNNNGGC 1 cut(s) 2053
BglII AGATCT 1 cut(s) 529
Bme1390I CCNGG 7 cut(s) 29, 914, 1834, 2381, 2490, 3302, 3573
Bme18I GGWCC 3 cut(s) 1030, 1381, 3473
BmeRI GACNNNNNGTC 1 cut(s) 3471
BmgBI CACGTC 4 cut(s) 983, 1435, 1817, 3376
BmgT120I GGNCC 5 cut(s) 1030, 1381, 3016, 3473, 3809
BmiI GGNNCC 3 cut(s) 447, 1899, 3342
BmrFI CCNGG 7 cut(s) 29, 914, 1834, 2381, 2490, 3302, 3573
BmrI ACTGGG 1 cut(s) 420
BmuI ACTGGG 1 cut(s) 420
BpiI GAAGAC 3 cut(s) 216, 635, 2532
BplI GAGNNNNNCTC 2 cut(s) 1434, 1466
BpmI CTGGAG 5 cut(s) 407, 2795, 2864, 3284, 3512
Bpu10I CCTNAGC 2 cut(s) 2763, 2768
BpuEI CTTGAG 7 cut(s) 48, 1341, 1678, 2465, 2479, 3440, 3545
BpuMI CCSGG 1 cut(s) 2490
Bsa29I ATCGAT 1 cut(s) 471
BsaAI YACGTR 2 cut(s) 1592, 2261
BsaBI GATNNNNATC 1 cut(s) 3279
BsaHI GRCGYC 3 cut(s) 2045, 3222, 3593
BsaJI CCNNGG 8 cut(s) 27, 438, 913, 1384, 1767, 1833, 2035, 3129
BsaWI WCCGGW 3 cut(s) 1207, 2921, 3395
BsaXI ACNNNNNCTCC 6 cut(s) 1517, 1547, 2793, 2823, 3479, 3509
Bse1I ACTGG 3 cut(s) 415, 1043, 3042
Bse21I CCTNAGG 2 cut(s) 2288, 2862
Bse3DI GCAATG 1 cut(s) 2544
Bse8I GATNNNNATC 1 cut(s) 3279
BseAI TCCGGA 1 cut(s) 3395
BseBI CCWGG 6 cut(s) 29, 914, 1834, 2381, 3302, 3573
BseCI ATCGAT 1 cut(s) 471
BseDI CCNNGG 8 cut(s) 27, 438, 913, 1384, 1767, 1833, 2035, 3129
BseJI GATNNNNATC 1 cut(s) 3279
BseMI GCAATG 1 cut(s) 2544
BseMII CTCAG 7 cut(s) 1954, 2302, 2599, 2759, 2853, 2904, 3172
BseNI ACTGG 3 cut(s) 415, 1043, 3042
BseRI GAGGAG 4 cut(s) 1525, 2697, 2702, 3815
BseSI GKGCMC 2 cut(s) 3128, 3690
BseXI GCAGC 9 cut(s) 10, 169, 751, 933, 954, 2223, 2711, 3074, 3077
BsgI GTGCAG 1 cut(s) 3076
BshNI GGYRCC 2 cut(s) 445, 1897
BshVI ATCGAT 1 cut(s) 471
BsiHKAI GWGCWC 3 cut(s) 840, 2488, 3690
BsiSI CCGG 6 cut(s) 265, 1208, 2490, 2630, 2922, 3396
BslFI GGGAC 3 cut(s) 2213, 2628, 3759
BsmBI CGTCTC 4 cut(s) 1886, 3298, 3329, 3458
BsmFI GGGAC 3 cut(s) 2213, 2628, 3759
BsmI GAATGC 1 cut(s) 2837
Bsp1286I GDGCHC 4 cut(s) 840, 2488, 3128, 3690
Bsp13I TCCGGA 1 cut(s) 3395
BspACI CCGC 8 cut(s) 152, 940, 1107, 1531, 1750, 3219, 3546, 3807
BspCNI CTCAG 7 cut(s) 1953, 2301, 2598, 2760, 2854, 2905, 3171
BspDI ATCGAT 1 cut(s) 471
BspEI TCCGGA 1 cut(s) 3395
BspHI TCATGA 2 cut(s) 655, 1492
BspLI GGNNCC 3 cut(s) 447, 1899, 3342
BspMAI CTGCAG 1 cut(s) 769
BspMI ACCTGC 2 cut(s) 769, 2016
BspPI GGATC 3 cut(s) 1333, 3522, 3538
BspT107I GGYRCC 2 cut(s) 445, 1897
BsrBI CCGCTC 2 cut(s) 1533, 3807
BsrDI GCAATG 1 cut(s) 2544
BsrI ACTGG 3 cut(s) 415, 1043, 3042
BssECI CCNNGG 8 cut(s) 27, 438, 913, 1384, 1767, 1833, 2035, 3129
BssNI GRCGYC 3 cut(s) 2045, 3222, 3593
BssSI CACGAG 1 cut(s) 833
BssT1I CCWWGG 5 cut(s) 438, 1384, 1767, 2035, 3129
Bst2BI CACGAG 1 cut(s) 833
Bst2UI CCWGG 6 cut(s) 29, 914, 1834, 2381, 3302, 3573
Bst4CI ACNGT 9 cut(s) 973, 1281, 2066, 2570, 3155, 3340, 3692, 3773, 3850
Bst6I CTCTTC 7 cut(s) 81, 759, 815, 1977, 2889, 2961, 3207
BstACI GRCGYC 3 cut(s) 2045, 3222, 3593
BstAPI GCANNNNNTGC 1 cut(s) 2217
BstBAI YACGTR 2 cut(s) 1592, 2261
BstC8I GCNNGC 1 cut(s) 1471
BstENI CCTNNNNNAGG 2 cut(s) 803, 2865
BstHHI GCGC 1 cut(s) 2729
BstMWI GCNNNNNNNGC 7 cut(s) 56, 224, 265, 918, 1994, 2053, 2217
BstNI CCWGG 6 cut(s) 29, 914, 1834, 2381, 3302, 3573
BstNSI RCATGY 4 cut(s) 1473, 1511, 1970, 2021
BstSCI CCNGG 7 cut(s) 27, 912, 1832, 2379, 2488, 3300, 3571
BstSFI CTRYAG 2 cut(s) 765, 777
BstSLI GKGCMC 2 cut(s) 3128, 3690
BstV1I GCAGC 9 cut(s) 10, 169, 751, 933, 954, 2223, 2711, 3074, 3077
BstV2I GAAGAC 3 cut(s) 216, 635, 2532
BstX2I RGATCY 2 cut(s) 529, 3514
BstXI CCANNNNNNTGG 3 cut(s) 1708, 1840, 2005
BstYI RGATCY 2 cut(s) 529, 3514
Bsu15I ATCGAT 1 cut(s) 471
Bsu36I CCTNAGG 2 cut(s) 2288, 2862
BsuTUI ATCGAT 1 cut(s) 471
BtgZI GCGATG 1 cut(s) 2715
BtrI CACGTC 4 cut(s) 983, 1435, 1817, 3376
BtsI GCAGTG 3 cut(s) 119, 774, 2719
BtsIMutI CAGTG 8 cut(s) 119, 774, 903, 1286, 2071, 2080, 2719, 3846
BveI ACCTGC 2 cut(s) 769, 2016
Cac8I GCNNGC 1 cut(s) 1471
CaiI CAGNNNCTG 1 cut(s) 2217
CciI TCATGA 2 cut(s) 655, 1492
CfoI GCGC 1 cut(s) 2729
Cfr13I GGNCC 5 cut(s) 1030, 1381, 3016, 3473, 3809
ClaI ATCGAT 1 cut(s) 471
CseI GACGC 2 cut(s) 2053, 3211
Csp6I GTAC 6 cut(s) 1115, 1291, 2021, 2087, 2258, 3162
CspCI CAANNNNNGTGG 2 cut(s) 945, 980
CviQI GTAC 6 cut(s) 1115, 1291, 2021, 2087, 2258, 3162
DraI TTTAAA 3 cut(s) 1582, 1668, 3213
DrdI GACNNNNNNGTC 2 cut(s) 2622, 3607
DriI GACNNNNNGTC 1 cut(s) 3471
DseDI GACNNNNNNGTC 2 cut(s) 2622, 3607
EaeI YGGCCR 4 cut(s) 600, 2239, 3551, 3818
Eam1104I CTCTTC 7 cut(s) 81, 759, 815, 1977, 2889, 2961, 3207
Eam1105I GACNNNNNGTC 1 cut(s) 3471
EarI CTCTTC 7 cut(s) 81, 759, 815, 1977, 2889, 2961, 3207
Eco130I CCWWGG 5 cut(s) 438, 1384, 1767, 2035, 3129
Eco147I AGGCCT 1 cut(s) 433
Eco47I GGWCC 3 cut(s) 1030, 1381, 3473
Eco57I CTGAAG 4 cut(s) 1046, 1086, 1712, 2720
Eco81I CCTNAGG 2 cut(s) 2288, 2862
EcoNI CCTNNNNNAGG 2 cut(s) 803, 2865
EcoO109I RGGNCCY 1 cut(s) 3016
EcoRI GAATTC 1 cut(s) 1760
EcoRII CCWGG 6 cut(s) 27, 912, 1832, 2379, 3300, 3571
EcoT14I CCWWGG 5 cut(s) 438, 1384, 1767, 2035, 3129
EcoT22I ATGCAT 1 cut(s) 794
ErhI CCWWGG 5 cut(s) 438, 1384, 1767, 2035, 3129
Esp3I CGTCTC 4 cut(s) 1886, 3298, 3329, 3458
FalI AAGNNNNNCTT 8 cut(s) 1319, 1351, 1350, 1382, 2073, 2105, 2441, 2473
FaqI GGGAC 3 cut(s) 2213, 2628, 3759
FauI CCCGC 2 cut(s) 947, 3539
FauNDI CATATG 1 cut(s) 457
FbaI TGATCA 1 cut(s) 1785
FblI GTMKAC 3 cut(s) 1813, 2926, 3409
FspBI CTAG 8 cut(s) 978, 1124, 1499, 2049, 2393, 3083, 3332, 3680
FspI TGCGCA 1 cut(s) 2728
GlaI GCGC 1 cut(s) 2728
GsuI CTGGAG 5 cut(s) 407, 2795, 2864, 3284, 3512
HapII CCGG 6 cut(s) 265, 1208, 2490, 2630, 2922, 3396
HgaI GACGC 2 cut(s) 2053, 3211
HhaI GCGC 1 cut(s) 2729
Hin1I GRCGYC 3 cut(s) 2045, 3222, 3593
Hin6I GCGC 1 cut(s) 2727
HinP1I GCGC 1 cut(s) 2727
HincII GTYRAC 1 cut(s) 2454
HindII GTYRAC 1 cut(s) 2454
HindIII AAGCTT 1 cut(s) 2635
HpaII CCGG 6 cut(s) 265, 1208, 2490, 2630, 2922, 3396
HphI GGTGA 7 cut(s) 925, 1469, 2395, 2530, 2833, 3439, 3733
Hpy166II GTNNAC 9 cut(s) 72, 898, 1115, 1814, 2454, 2777, 2927, 3410, 3688
Hpy8I GTNNAC 9 cut(s) 72, 898, 1115, 1814, 2454, 2777, 2927, 3410, 3688
Hpy99I CGWCG 1 cut(s) 3240
HpyCH4III ACNGT 9 cut(s) 973, 1281, 2066, 2570, 3155, 3340, 3692, 3773, 3850
HpyCH4IV ACGT 8 cut(s) 982, 1434, 1591, 1816, 2260, 2993, 3375, 3593
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 224, 265, 918, 1994, 2053, 2217
HpySE526I ACGT 8 cut(s) 982, 1434, 1591, 1816, 2260, 2993, 3375, 3593
Hsp92I GRCGYC 3 cut(s) 2045, 3222, 3593
HspAI GCGC 1 cut(s) 2727
Kpn2I TCCGGA 1 cut(s) 3395
Ksp22I TGATCA 1 cut(s) 1785
LmnI GCTCC 5 cut(s) 1301, 1538, 2491, 2710, 3487
Lsp1109I GCAGC 9 cut(s) 10, 169, 751, 933, 954, 2223, 2711, 3074, 3077
MaeI CTAG 8 cut(s) 978, 1124, 1499, 2049, 2393, 3083, 3332, 3680
MaeII ACGT 8 cut(s) 982, 1434, 1591, 1816, 2260, 2993, 3375, 3593
MaeIII GTNAC 8 cut(s) 113, 931, 1410, 2075, 2673, 3133, 3223, 3371
MbiI CCGCTC 2 cut(s) 1533, 3807
MflI RGATCY 2 cut(s) 529, 3514
MhlI GDGCHC 4 cut(s) 840, 2488, 3128, 3690
MlsI TGGCCA 1 cut(s) 3553
MluNI TGGCCA 1 cut(s) 3553
MlyI GAGTC 7 cut(s) 110, 758, 2235, 2855, 3206, 3415, 3503
MmeI TCCRAC 2 cut(s) 186, 1366
Mox20I TGGCCA 1 cut(s) 3553
Mph1103I ATGCAT 1 cut(s) 794
MroI TCCGGA 1 cut(s) 3395
MroXI GAANNNNTTC 2 cut(s) 1421, 1526
MscI TGGCCA 1 cut(s) 3553
Msp20I TGGCCA 1 cut(s) 3553
MspI CCGG 6 cut(s) 265, 1208, 2490, 2630, 2922, 3396
MspR9I CCNGG 7 cut(s) 29, 914, 1834, 2381, 2490, 3302, 3573
Mva1269I GAATGC 1 cut(s) 2837
MvaI CCWGG 6 cut(s) 29, 914, 1834, 2381, 3302, 3573
MwoI GCNNNNNNNGC 7 cut(s) 56, 224, 265, 918, 1994, 2053, 2217
NciI CCSGG 1 cut(s) 2490
NdeI CATATG 1 cut(s) 457
NlaIV GGNNCC 3 cut(s) 447, 1899, 3342
NmuCI GTSAC 5 cut(s) 113, 931, 2075, 3223, 3371
NsbI TGCGCA 1 cut(s) 2728
NsiI ATGCAT 1 cut(s) 794
NspI RCATGY 4 cut(s) 1473, 1511, 1970, 2021
PaeI GCATGC 1 cut(s) 1473
PagI TCATGA 2 cut(s) 655, 1492
PceI AGGCCT 1 cut(s) 433
PciI ACATGT 3 cut(s) 1507, 1966, 2017
PctI GAATGC 1 cut(s) 2837
PdmI GAANNNNTTC 2 cut(s) 1421, 1526
PflMI CCANNNNNTGG 5 cut(s) 192, 2237, 2818, 2842, 3527
PfoI TCCNGGA 1 cut(s) 3300
PleI GAGTC 7 cut(s) 110, 757, 2234, 2854, 3205, 3414, 3502
PpsI GAGTC 7 cut(s) 110, 757, 2234, 2854, 3205, 3414, 3502
Ppu21I YACGTR 2 cut(s) 1592, 2261
PscI ACATGT 3 cut(s) 1507, 1966, 2017
Psp6I CCWGG 6 cut(s) 27, 912, 1832, 2379, 3300, 3571
PspGI CCWGG 6 cut(s) 27, 912, 1832, 2379, 3300, 3571
PspN4I GGNNCC 3 cut(s) 447, 1899, 3342
PspPI GGNCC 5 cut(s) 1030, 1381, 3016, 3473, 3809
PstI CTGCAG 1 cut(s) 769
PstNI CAGNNNCTG 1 cut(s) 2217
PsuI RGATCY 2 cut(s) 529, 3514
RsaI GTAC 6 cut(s) 1116, 1292, 2022, 2088, 2259, 3163
RsaNI GTAC 6 cut(s) 1115, 1291, 2021, 2087, 2258, 3162
Sau96I GGNCC 5 cut(s) 1030, 1381, 3016, 3473, 3809
SchI GAGTC 7 cut(s) 110, 758, 2235, 2855, 3206, 3415, 3503
ScrFI CCNGG 7 cut(s) 29, 914, 1834, 2381, 2490, 3302, 3573
SduI GDGCHC 4 cut(s) 840, 2488, 3128, 3690
SfcI CTRYAG 2 cut(s) 765, 777
SinI GGWCC 3 cut(s) 1030, 1381, 3473
SmiI ATTTAAAT 1 cut(s) 1668
SmlI CTYRAG 7 cut(s) 63, 1356, 1657, 2444, 2458, 3455, 3560
SmoI CTYRAG 7 cut(s) 63, 1356, 1657, 2444, 2458, 3455, 3560
SphI GCATGC 1 cut(s) 1473
SseBI AGGCCT 1 cut(s) 433
SsiI CCGC 8 cut(s) 152, 940, 1107, 1531, 1750, 3219, 3546, 3807
SspI AATATT 2 cut(s) 1397, 1405
SspMI CTAG 8 cut(s) 978, 1124, 1499, 2049, 2393, 3083, 3332, 3680
StuI AGGCCT 1 cut(s) 433
StyD4I CCNGG 7 cut(s) 27, 912, 1832, 2379, 2488, 3300, 3571
StyI CCWWGG 5 cut(s) 438, 1384, 1767, 2035, 3129
SwaI ATTTAAAT 1 cut(s) 1668
TaaI ACNGT 9 cut(s) 973, 1281, 2066, 2570, 3155, 3340, 3692, 3773, 3850
TaiI ACGT 8 cut(s) 985, 1437, 1594, 1819, 2263, 2996, 3378, 3596
TaqII GACCGA 1 cut(s) 1047
TatI WGTACW 2 cut(s) 2086, 3161
TauI GCSGC 2 cut(s) 3222, 3810
TscAI CASTG 8 cut(s) 126, 774, 910, 1286, 2071, 2080, 2726, 3853
TseFI GTSAC 5 cut(s) 113, 931, 2075, 3223, 3371
TseI GCWGC 9 cut(s) 23, 182, 764, 921, 942, 2211, 2724, 3087, 3090
Tsp45I GTSAC 5 cut(s) 113, 931, 2075, 3223, 3371
TspGWI ACGGA 7 cut(s) 2432, 2553, 3161, 3224, 3359, 3465, 3709
TspRI CASTG 8 cut(s) 126, 774, 910, 1286, 2071, 2080, 2726, 3853
Van91I CCANNNNNTGG 5 cut(s) 192, 2237, 2818, 2842, 3527
VneI GTGCAC 1 cut(s) 3686
VpaK11BI GGWCC 3 cut(s) 1030, 1381, 3473
XagI CCTNNNNNAGG 2 cut(s) 803, 2865
XapI RAATTY 7 cut(s) 1760, 1780, 1957, 2120, 2153, 3346, 3579
XbaI TCTAGA 1 cut(s) 3331
XceI RCATGY 4 cut(s) 1473, 1511, 1970, 2021
XcmI CCANNNNNNNNNTGG 1 cut(s) 193
XmiI GTMKAC 3 cut(s) 1813, 2926, 3409
XmnI GAANNNNTTC 2 cut(s) 1421, 1526
XspI CTAG 8 cut(s) 978, 1124, 1499, 2049, 2393, 3083, 3332, 3680
ZraI GACGTC 1 cut(s) 3594
Zsp2I ATGCAT 1 cut(s) 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.