Rroxscaffold_5G00364600

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
45789385 .. 45798376
8992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00364600.1

Sequence Viewer

Length: 3180 bp
ATGGGTGTGTGTATCCACCCTTTTGAAGTCAAGACGATCTTAAGGGGGATCTTGGAAACTCTGAAACCAGAAAAAGCAGCAATACAAAGCAAGGACGCGATTTGTAAATTCATTCGAGAAGAGGTAAAAGGGAAAAGATACCTTCTCGTATTGGATGATGTTTGGAGCGAAGATCCAGAAAAATGGAAGGAGTTGAGGAGTAGTTTGTTAACAATTAATGATACTCAAGGAAGCAGCATCATTGTCACTACCCGTAGTGACAGAGTTGCAAAAGTCATGGAAACTCTTCCTAGATGTGATTTAAGAAAACTATCGGATGATGAATGCTGGCTCATTTTGAAGGATAAAGCCATTCCAATTGGGAGTCCTCCTATGTCTAAAGAGCAGGAGATAATTGGTAGAGAGATCGCTAAAAGATGTGGAGGTCTACCACTAGTGTCAAAGGTTTTGGGAGATGTGATGCGCTCTAAAACAAGTGATGAATGGCAATCAATTTTAAAAAGTAAAATATGGGATTCACCAGAAGGAGAGAAGAGAATTTTTTCAATTTTGAAGCTGAGTTTCGATGAATTGAAACCTCCTTCCTTGAAACAATGTTTTGCATATTGCTCAATGTTCTTCAAAGATTTTGATATTGAAAAGGATGACTTGATCCAACTTTGGATGGCTCAGGGATGGCTTGACCCGTGTTCTAACAAAATCTTAGAGATGGAGGAGAGAGGTAATGAATATTTTAGAATCCTATTGGCTAAGTCTTTTTTTCAAGACGTTACAAAGGATTATGATGGTAATGTTACCAAATGTAAAATGCACGATCTTGTGCATGATCTTGCACAACATGTTTCAAAATCAAGGGACTCACGCTCACTTTTTTCAAATGGAGAAGTTCTTGAGAGCAACGTACTTAACTTTAAAACTTTACGTGTCTTAAATTTATACAAAGCCGACATTATGGAGTTGCCAATTTCAATTGGGAAGTTGAAACATTTGAGGTATTTGAATGTTTTGGAAACAAGAATTAAAACATTTCCCAAAACAATAGGCCAGCTTTATAACTTGCAAACTTTGAAAATACCTTATCAGCTTGAAGAGTTTCCAAAGGAAATTGCAAATTTGATCAACTTGCGGCACATTTATTTTGGTAGATATATGAAAGTTCCAAGTGGGATATTGGGACGGTTCACCAATCTCCGGTCATTACCTTTTCTCAGGGTGGGTAAAGAGACAAGTCTTAGAATTGAGGAATTGGGTTGTTTAAACCAGTTGCATGACACCTTGTCTATATATGGACTTGAAAATGTAGGAGATGGAGAAGAAGCTCTGAAAGCAAACTTGGTCGAGAAGAAACATATACGCAAGTTAATCCTTGATTGGAAGCTTAGTAGGCCAAGCCATAATGTGGAGAATGAGGATAATGTACTAGAAGGCCTCCAACCACATTCTAGTTTGGAATTTTTGGAGATTCAGGGATTCATGGGTGTTAAATTTCCATCATGGTTATTCCTAGCCAACCATTTGAAGGAGATTGAATTATTGGGCTGCAACAAATGTGATGGAGTCCCAGTACTTGGGCATTTACCCAATCTTAGTTGTGTTAAGATTAAGAGAATGCAGAACCTAGCTCGTATAGGACCTGAGTTCTATGGTGATCATGACCATGTCAACTGTGAAAATGGATCAAGTAACAAGGCGCGATCTTTGTTCCCTGCTTTGAAAACGTTGCAGATAGAGTGGGCCCAGAACCTGGTCGAGTGGATGGAAGCGCCAACAGAAAGAGCGAGTGTGGTGTTTCCATGCCTCGAGGAGCTGACCTTGATTAAATGTGACAAACTGACAAGTGCTCCCAGTCATTTCCCATCTCTCAAGAAGTTGGTCATAGAATGGATGGATAGCGGAGGCATGCCAATAGCTAGTATTCTAAACAATCAACTCACAACTCTCACTTATCTCAGATTATTGCGTGTGGGGGGACTTGCTTGTCTGCCGGAAGGGCTGTTAGAAAACAACAAGAATCTTGCACATTTAGACATAAGTCAGTGTTCAGAGTTAACTTGTATTTCTCCTCGATCACAAGGATTAGAGTACTGTAGCGCATCTCTTTCATATTTGGGGCTAAGTTATTGTGAGAATCTCAGATATTTACCTGATGGGCTACTCACTCCTTCTCTTAAAGAGATGACGTTGTATGCTTGTGACAATCTAGAGTACATCCCAGATGCTACACACGGTGGTCTCACATCCCTTGAAACATTGTCTTTGACAATGTGCTATAAAATAACTTCGATTCCATTTTCACAAGGCCTGCCATCTCTTGGTGAATTACATATAGACGAGTGTCCGGAATTATCAAGCCTACCGGGTGGACTAGAATACTGTACCTCTATTCGGAGTTTGTCAATAACAGCTTGCCCCAAGGTACCATCCATTTCAATCGAAAGTCTGAGTGCATCCCTCGAAGATTTGTGTGTAAGTAATCTACACTCTCTTCCAATTTCACAAGGAGGCTTCACATCACTCCGTCAATTGAGAATTGAGCGCGGCGAAAGTGCCCAAATTGGGCCAGAATTTAGTGCCTTTCTTCAAACCCTCGTCTCTCTTGAAAAATTGACGATAAGGTTTTGCAAAAATCTAGAGAGTATTCCAAGTTCAGACAAGCTCACATCCCTCCGCAGCTTGGAGATTAGTCGATGTAATAAATTAACATGTCTACCGAATGGGTTAGCAGCATCGTCACAGCCCTGCAGCCTCACCCGTTTGAAGGAATTGACAATTGGTGAGTTCAGCGAGGATCTCGATGCATTCCCAGCTTTTCAGGCTATACCACAGCTTGAATCATTAACCATCTGGGGGTGGGATAAGCTCAAATCTCTCCCTGAACAAATTCAACACTTGCCTTCTTTAAGGCATTTGGAAATAAATTGGTTTCGCGGAGTGGAGGCTATTCCAGAGTGGTTGGGAAACCTTGCATCTCTTGAGGACCTGACTATTTGGTTTTGCGAGACTCTGAAGTATCTTCCTTCTGTGGAAGCAATGCAACGCCTCACCAAATTGAAAGAGATAAACATCTACGACTGCCCCCTTCTAGAAGAAAGATGCAGGGAGGAGAGCGGCTCAGAGTGGCCAAAGATTCGTCATCTTCCGTTCATCACGATTGAAGATACAAAAATCGAGAATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1059

Amino Acids

119.95

Weight (kDa)

5.84

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 8 - 118 1.7e-15 NB-ARC domain
WHD_DRP PF23559 205 - 278 1.3e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 290 - 541 2.5e-28 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 413 - 537 9.5e-35 R13L1/DRL21 LRRs
LRR_14 PF23598 743 - 949 3.5e-07 Leucine-rich repeat region
LRR_14 PF23598 943 - 1024 4.2e-08 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 959 - 1018 8.2e-08 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1053
AasI GACNNNNNNGTC 1 cut(s) 1977
AbsI CCTCGAGG 1 cut(s) 1799
Acc65I GGTACC 1 cut(s) 2416
AccB1I GGYRCC 1 cut(s) 2416
AccB7I CCANNNNNTGG 4 cut(s) 1399, 1568, 1744, 2312
AccBSI CCGCTC 1 cut(s) 3108
AccI GTMKAC 2 cut(s) 427, 2707
AccII CGCG 4 cut(s) 98, 1693, 2538, 2928
AccIII TCCGGA 1 cut(s) 2338
AciI CCGC 6 cut(s) 1126, 1893, 2538, 2668, 2928, 3108
AclI AACGTT 1 cut(s) 1718
AclWI GGATC 5 cut(s) 56, 167, 646, 1684, 2796
AcoI YGGCCR 1 cut(s) 3119
AcsI RAATTY 8 cut(s) 107, 537, 931, 1111, 1451, 1484, 2564, 2880
AcuI CTGAAG 1 cut(s) 3026
AdeI CACNNNGTG 1 cut(s) 2228
AfaI GTAC 7 cut(s) 903, 1419, 1566, 2084, 2207, 2377, 2418
AflII CTTAAG 1 cut(s) 40
AflIII ACRYGT 3 cut(s) 838, 922, 2702
AhdI GACNNNNNGTC 1 cut(s) 1276
AhlI ACTAGT 1 cut(s) 433
AjnI CCWGG 1 cut(s) 1743
AjuI GAANNNNNNNTTGG 4 cut(s) 1316, 1348, 2754, 2786
Alw21I GWGCWC 1 cut(s) 1843
Alw26I GTCTC 4 cut(s) 1217, 2237, 2596, 2993
AlwI GGATC 5 cut(s) 56, 167, 646, 1684, 2796
AlwNI CAGNNNCTG 1 cut(s) 1744
Ama87I CYCGRG 1 cut(s) 1799
Aor13HI TCCGGA 1 cut(s) 2338
AoxI GGCC 7 cut(s) 1042, 1385, 1426, 1734, 2299, 2558, 3119
ApaI GGGCCC 1 cut(s) 1738
ApeKI GCWGC 6 cut(s) 77, 234, 1539, 2670, 2723, 2742
ApoI RAATTY 8 cut(s) 107, 537, 931, 1111, 1451, 1484, 2564, 2880
AseI ATTAAT 1 cut(s) 216
Asp700I GAANNNNTTC 4 cut(s) 285, 541, 1092, 2880
Asp718I GGTACC 1 cut(s) 2416
AspLEI GCGC 5 cut(s) 465, 1693, 1765, 2093, 2538
AspS9I GGNCC 5 cut(s) 1631, 1734, 1735, 2558, 2977
AsuC2I CCSGG 1 cut(s) 2358
AsuHPI GGTGA 7 cut(s) 510, 1174, 1658, 2327, 2740, 2786, 3034
AvaI CYCGRG 1 cut(s) 1799
AvaII GGWCC 2 cut(s) 1631, 2977
BaeGI GKGCMC 2 cut(s) 1738, 2551
BalI TGGCCA 1 cut(s) 3121
BanI GGYRCC 1 cut(s) 2416
BanII GRGCYC 1 cut(s) 1738
Bbv12I GWGCWC 1 cut(s) 1843
BbvI GCAGC 6 cut(s) 89, 246, 1526, 2682, 2735, 2754
BciT130I CCWGG 1 cut(s) 1745
BciVI GTATCC 1 cut(s) 23
BclI TGATCA 2 cut(s) 1116, 1648
BcnI CCSGG 1 cut(s) 2358
BcoDI GTCTC 4 cut(s) 1217, 2237, 2596, 2993
BcuI ACTAGT 1 cut(s) 433
BfmI CTRYAG 2 cut(s) 2086, 2740
BfoI RGCGCY 1 cut(s) 1766
BfrI CTTAAG 1 cut(s) 40
BfuI GTATCC 1 cut(s) 23
BglI GCCNNNNNGGC 1 cut(s) 1990
BisI GCNGC 9 cut(s) 78, 235, 1127, 1540, 2539, 2671, 2724, 2743, 3109
BlsI GCNGC 9 cut(s) 79, 236, 1128, 1541, 2540, 2672, 2725, 2744, 3110
BmcAI AGTACT 2 cut(s) 1566, 2084
Bme1390I CCNGG 2 cut(s) 1745, 2358
Bme18I GGWCC 2 cut(s) 1631, 2977
BmeRI GACNNNNNGTC 1 cut(s) 1276
BmeT110I CYCGRG 1 cut(s) 1799
BmgT120I GGNCC 5 cut(s) 1631, 1734, 1735, 2558, 2977
BmiI GGNNCC 2 cut(s) 1736, 2418
BmrFI CCNGG 2 cut(s) 1745, 2358
BmrI ACTGGG 2 cut(s) 1556, 1839
BmsI GCATC 9 cut(s) 246, 450, 2102, 2206, 2456, 2735, 2785, 2975, 3083
BmuI ACTGGG 2 cut(s) 1556, 1839
BoxI GACNNNNGTC 2 cut(s) 2031, 2334
BplI GAGNNNNNCTC 2 cut(s) 3095, 3127
Bpu10I CCTNAGC 1 cut(s) 669
BpuEI CTTGAG 4 cut(s) 210, 911, 1847, 2993
BpuMI CCSGG 1 cut(s) 2358
BsaAI YACGTR 1 cut(s) 923
BsaBI GATNNNNATC 1 cut(s) 3062
BsaI GGTCTC 1 cut(s) 2237
BsaJI CCNNGG 1 cut(s) 2412
BsaWI WCCGGW 2 cut(s) 1191, 2338
BsaXI ACNNNNNCTCC 4 cut(s) 1548, 1578, 1825, 1855
Bse1I ACTGG 3 cut(s) 1261, 1562, 1845
Bse3DI GCAATG 1 cut(s) 3036
Bse8I GATNNNNATC 1 cut(s) 3062
BseAI TCCGGA 1 cut(s) 2338
BseBI CCWGG 1 cut(s) 1745
BseDI CCNNGG 1 cut(s) 2412
BseJI GATNNNNATC 1 cut(s) 3062
BseMI GCAATG 1 cut(s) 3036
BseMII CTCAG 8 cut(s) 548, 683, 1222, 1626, 1963, 2146, 2432, 3126
BseNI ACTGG 3 cut(s) 1261, 1562, 1845
BseRI GAGGAG 5 cut(s) 211, 728, 1817, 2052, 3116
BseSI GKGCMC 2 cut(s) 1738, 2551
BseXI GCAGC 6 cut(s) 89, 246, 1526, 2682, 2735, 2754
BseYI CCCAGC 1 cut(s) 2803
Bsh1236I CGCG 4 cut(s) 98, 1693, 2538, 2928
BshFI GGCC 7 cut(s) 1044, 1387, 1428, 1736, 2301, 2560, 3121
BshNI GGYRCC 1 cut(s) 2416
BsiHKAI GWGCWC 1 cut(s) 1843
BsiHKCI CYCGRG 1 cut(s) 1799
BsiSI CCGG 4 cut(s) 1192, 1985, 2339, 2357
BslFI GGGAC 4 cut(s) 869, 1188, 1544, 1983
BsmAI GTCTC 4 cut(s) 1217, 2237, 2596, 2993
BsmBI CGTCTC 1 cut(s) 2596
BsmFI GGGAC 4 cut(s) 869, 1188, 1544, 1983
BsmI GAATGC 3 cut(s) 329, 1614, 2798
BsnI GGCC 7 cut(s) 1044, 1387, 1428, 1736, 2301, 2560, 3121
Bso31I GGTCTC 1 cut(s) 2237
BsoBI CYCGRG 1 cut(s) 1799
Bsp120I GGGCCC 1 cut(s) 1734
Bsp1286I GDGCHC 3 cut(s) 1738, 1843, 2551
Bsp13I TCCGGA 1 cut(s) 2338
BspACI CCGC 6 cut(s) 1126, 1893, 2538, 2668, 2928, 3108
BspANI GGCC 7 cut(s) 1044, 1387, 1428, 1736, 2301, 2560, 3121
BspCNI CTCAG 8 cut(s) 549, 682, 1221, 1627, 1962, 2145, 2433, 3125
BspEI TCCGGA 1 cut(s) 2338
BspFNI CGCG 4 cut(s) 98, 1693, 2538, 2928
BspHI TCATGA 1 cut(s) 1651
BspLI GGNNCC 2 cut(s) 1736, 2418
BspMAI CTGCAG 1 cut(s) 2744
BspPI GGATC 5 cut(s) 56, 167, 646, 1684, 2796
BspT107I GGYRCC 1 cut(s) 2416
BspTI CTTAAG 1 cut(s) 40
BspTNI GGTCTC 1 cut(s) 2237
BsrBI CCGCTC 1 cut(s) 3108
BsrDI GCAATG 1 cut(s) 3036
BsrI ACTGG 3 cut(s) 1261, 1562, 1845
BssECI CCNNGG 1 cut(s) 2412
BssT1I CCWWGG 1 cut(s) 2412
Bst2UI CCWGG 1 cut(s) 1745
Bst4CI ACNGT 5 cut(s) 1179, 1667, 2087, 2228, 2375
Bst6I CTCTTC 5 cut(s) 114, 291, 527, 1083, 2490
BstAFI CTTAAG 1 cut(s) 40
BstBAI YACGTR 1 cut(s) 923
BstC8I GCNNGC 5 cut(s) 329, 1046, 1901, 2303, 2407
BstFNI CGCG 4 cut(s) 98, 1693, 2538, 2928
BstH2I RGCGCY 1 cut(s) 1766
BstHHI GCGC 5 cut(s) 465, 1693, 1765, 2093, 2538
BstMAI GTCTC 4 cut(s) 1217, 2237, 2596, 2993
BstMWI GCNNNNNNNGC 5 cut(s) 1325, 1384, 1990, 2804, 2813
BstNI CCWGG 1 cut(s) 1745
BstNSI RCATGY 3 cut(s) 842, 1903, 2706
BstPAI GACNNNNGTC 2 cut(s) 2031, 2334
BstSCI CCNGG 2 cut(s) 1743, 2356
BstSFI CTRYAG 2 cut(s) 2086, 2740
BstSLI GKGCMC 2 cut(s) 1738, 2551
BstUI CGCG 4 cut(s) 98, 1693, 2538, 2928
BstV1I GCAGC 6 cut(s) 89, 246, 1526, 2682, 2735, 2754
BstX2I RGATCY 3 cut(s) 48, 172, 2788
BstXI CCANNNNNNTGG 1 cut(s) 183
BstYI RGATCY 3 cut(s) 48, 172, 2788
BsuI GTATCC 1 cut(s) 23
BsuRI GGCC 7 cut(s) 1044, 1387, 1428, 1736, 2301, 2560, 3121
BtsIMutI CAGTG 1 cut(s) 2042
Cac8I GCNNGC 5 cut(s) 329, 1046, 1901, 2303, 2407
CaiI CAGNNNCTG 1 cut(s) 1744
CciI TCATGA 1 cut(s) 1651
CfoI GCGC 5 cut(s) 465, 1693, 1765, 2093, 2538
Cfr13I GGNCC 5 cut(s) 1631, 1734, 1735, 2558, 2977
CseI GACGC 1 cut(s) 104
CsiI ACCWGGT 1 cut(s) 1743
Csp6I GTAC 7 cut(s) 902, 1418, 1565, 2083, 2206, 2376, 2417
CviQI GTAC 7 cut(s) 902, 1418, 1565, 2083, 2206, 2376, 2417
DraI TTTAAA 3 cut(s) 498, 913, 1257
DraIII CACNNNGTG 1 cut(s) 2228
DrdI GACNNNNNNGTC 1 cut(s) 1977
DriI GACNNNNNGTC 1 cut(s) 1276
DseDI GACNNNNNNGTC 1 cut(s) 1977
EaeI YGGCCR 1 cut(s) 3119
Eam1104I CTCTTC 5 cut(s) 114, 291, 527, 1083, 2490
Eam1105I GACNNNNNGTC 1 cut(s) 1276
EarI CTCTTC 5 cut(s) 114, 291, 527, 1083, 2490
Eco130I CCWWGG 1 cut(s) 2412
Eco147I AGGCCT 2 cut(s) 1428, 2301
Eco24I GRGCYC 1 cut(s) 1738
Eco31I GGTCTC 1 cut(s) 2237
Eco47I GGWCC 2 cut(s) 1631, 2977
Eco57I CTGAAG 1 cut(s) 3026
Eco88I CYCGRG 1 cut(s) 1799
EcoO109I RGGNCCY 2 cut(s) 1631, 2977
EcoRII CCWGG 1 cut(s) 1743
EcoT14I CCWWGG 1 cut(s) 2412
EcoT22I ATGCAT 1 cut(s) 2800
EcoT38I GRGCYC 1 cut(s) 1738
ErhI CCWWGG 1 cut(s) 2412
Esp3I CGTCTC 1 cut(s) 2596
FalI AAGNNNNNCTT 4 cut(s) 23, 55, 632, 664
FaqI GGGAC 4 cut(s) 869, 1188, 1544, 1983
FbaI TGATCA 2 cut(s) 1116, 1648
FblI GTMKAC 2 cut(s) 427, 2707
Fnu4HI GCNGC 9 cut(s) 78, 235, 1127, 1540, 2539, 2671, 2724, 2743, 3109
FriOI GRGCYC 1 cut(s) 1738
Fsp4HI GCNGC 9 cut(s) 78, 235, 1127, 1540, 2539, 2671, 2724, 2743, 3109
GlaI GCGC 5 cut(s) 464, 1692, 1764, 2092, 2537
GluI GCNGC 9 cut(s) 78, 235, 1127, 1540, 2539, 2671, 2724, 2743, 3109
GsaI CCCAGC 1 cut(s) 2807
HaeII RGCGCY 1 cut(s) 1766
HaeIII GGCC 7 cut(s) 1044, 1387, 1428, 1736, 2301, 2560, 3121
HapII CCGG 4 cut(s) 1192, 1985, 2339, 2357
HgaI GACGC 1 cut(s) 104
HhaI GCGC 5 cut(s) 465, 1693, 1765, 2093, 2538
Hin6I GCGC 5 cut(s) 463, 1691, 1763, 2091, 2536
HinP1I GCGC 5 cut(s) 463, 1691, 1763, 2091, 2536
HincII GTYRAC 3 cut(s) 210, 1663, 2049
HindII GTYRAC 3 cut(s) 210, 1663, 2049
HindIII AAGCTT 1 cut(s) 1376
HpaI GTTAAC 2 cut(s) 210, 2049
HpaII CCGG 4 cut(s) 1192, 1985, 2339, 2357
HphI GGTGA 7 cut(s) 510, 1174, 1658, 2327, 2740, 2786, 3034
Hpy166II GTNNAC 7 cut(s) 210, 428, 1182, 1663, 2049, 2363, 2708
Hpy8I GTNNAC 7 cut(s) 210, 428, 1182, 1663, 2049, 2363, 2708
HpyCH4III ACNGT 5 cut(s) 1179, 1667, 2087, 2228, 2375
HpyCH4IV ACGT 5 cut(s) 768, 900, 922, 1718, 2180
HpyF10VI GCNNNNNNNGC 5 cut(s) 1325, 1384, 1990, 2804, 2813
HpySE526I ACGT 5 cut(s) 768, 900, 922, 1718, 2180
HspAI GCGC 5 cut(s) 463, 1691, 1763, 2091, 2536
Kpn2I TCCGGA 1 cut(s) 2338
KpnI GGTACC 1 cut(s) 2420
Ksp22I TGATCA 2 cut(s) 1116, 1648
KspAI GTTAAC 2 cut(s) 210, 2049
LmnI GCTCC 3 cut(s) 165, 1804, 1846
Lsp1109I GCAGC 6 cut(s) 89, 246, 1526, 2682, 2735, 2754
LweI GCATC 9 cut(s) 246, 450, 2102, 2206, 2456, 2735, 2785, 2975, 3083
MabI ACCWGGT 1 cut(s) 1743
MaeII ACGT 5 cut(s) 768, 900, 922, 1718, 2180
MaeIII GTNAC 8 cut(s) 244, 257, 769, 793, 1682, 1823, 2192, 2730
MbiI CCGCTC 1 cut(s) 3108
MfeI CAATTG 4 cut(s) 357, 969, 2522, 2769
MflI RGATCY 3 cut(s) 48, 172, 2788
MhlI GDGCHC 3 cut(s) 1738, 1843, 2551
MlsI TGGCCA 1 cut(s) 3121
MluNI TGGCCA 1 cut(s) 3121
MlyI GAGTC 4 cut(s) 373, 851, 1566, 2995
MmeI TCCRAC 2 cut(s) 679, 1456
Mox20I TGGCCA 1 cut(s) 3121
Mph1103I ATGCAT 1 cut(s) 2800
MroI TCCGGA 1 cut(s) 2338
MroXI GAANNNNTTC 4 cut(s) 285, 541, 1092, 2880
MscI TGGCCA 1 cut(s) 3121
MslI CAYNNNNRTG 1 cut(s) 1656
Msp20I TGGCCA 1 cut(s) 3121
MspCI CTTAAG 1 cut(s) 40
MspI CCGG 4 cut(s) 1192, 1985, 2339, 2357
MspR9I CCNGG 2 cut(s) 1745, 2358
MssI GTTTAAAC 1 cut(s) 1257
MunI CAATTG 4 cut(s) 357, 969, 2522, 2769
Mva1269I GAATGC 3 cut(s) 329, 1614, 2798
MvaI CCWGG 1 cut(s) 1745
MvnI CGCG 4 cut(s) 98, 1693, 2538, 2928
MwoI GCNNNNNNNGC 5 cut(s) 1325, 1384, 1990, 2804, 2813
NciI CCSGG 1 cut(s) 2358
NlaIV GGNNCC 2 cut(s) 1736, 2418
NmuCI GTSAC 5 cut(s) 244, 257, 1823, 2192, 2730
NsiI ATGCAT 1 cut(s) 2800
NspI RCATGY 3 cut(s) 842, 1903, 2706
PaeI GCATGC 1 cut(s) 1903
PaeR7I CTCGAG 1 cut(s) 1799
PagI TCATGA 1 cut(s) 1651
PceI AGGCCT 2 cut(s) 1428, 2301
PciI ACATGT 2 cut(s) 838, 2702
PctI GAATGC 3 cut(s) 329, 1614, 2798
PdmI GAANNNNTTC 4 cut(s) 285, 541, 1092, 2880
PfeI GAWTC 9 cut(s) 515, 738, 1462, 1470, 2011, 2128, 2284, 2831, 3127
PflFI GACNNNGTC 1 cut(s) 1658
PflMI CCANNNNNTGG 4 cut(s) 1399, 1568, 1744, 2312
PkrI GCNGC 9 cut(s) 79, 236, 1128, 1541, 2540, 2672, 2725, 2744, 3110
PleI GAGTC 4 cut(s) 372, 851, 1565, 2995
PmeI GTTTAAAC 1 cut(s) 1257
PpsI GAGTC 4 cut(s) 372, 851, 1565, 2995
Ppu21I YACGTR 1 cut(s) 923
PpuMI RGGWCCY 2 cut(s) 1631, 2977
PscI ACATGT 2 cut(s) 838, 2702
PshAI GACNNNNGTC 2 cut(s) 2031, 2334
PshBI ATTAAT 1 cut(s) 216
PsiI TTATAA 1 cut(s) 1053
Psp1406I AACGTT 1 cut(s) 1718
Psp5II RGGWCCY 2 cut(s) 1631, 2977
Psp6I CCWGG 1 cut(s) 1743
PspFI CCCAGC 1 cut(s) 2803
PspGI CCWGG 1 cut(s) 1743
PspN4I GGNNCC 2 cut(s) 1736, 2418
PspOMI GGGCCC 1 cut(s) 1734
PspPI GGNCC 5 cut(s) 1631, 1734, 1735, 2558, 2977
PspPPI RGGWCCY 2 cut(s) 1631, 2977
PspXI VCTCGAGB 1 cut(s) 1799
PsrI GAACNNNNNNTAC 2 cut(s) 2629, 2661
PstI CTGCAG 1 cut(s) 2744
PstNI CAGNNNCTG 1 cut(s) 1744
PsuI RGATCY 3 cut(s) 48, 172, 2788
PsyI GACNNNGTC 1 cut(s) 1658
RsaI GTAC 7 cut(s) 903, 1419, 1566, 2084, 2207, 2377, 2418
RsaNI GTAC 7 cut(s) 902, 1418, 1565, 2083, 2206, 2376, 2417
RseI CAYNNNNRTG 1 cut(s) 1656
SatI GCNGC 9 cut(s) 78, 235, 1127, 1540, 2539, 2671, 2724, 2743, 3109
Sau96I GGNCC 5 cut(s) 1631, 1734, 1735, 2558, 2977
ScaI AGTACT 2 cut(s) 1566, 2084
SchI GAGTC 4 cut(s) 373, 851, 1566, 2995
ScrFI CCNGG 2 cut(s) 1745, 2358
SduI GDGCHC 3 cut(s) 1738, 1843, 2551
SexAI ACCWGGT 1 cut(s) 1743
SfaNI GCATC 9 cut(s) 246, 450, 2102, 2206, 2456, 2735, 2785, 2975, 3083
SfcI CTRYAG 2 cut(s) 2086, 2740
Sfr274I CTCGAG 1 cut(s) 1799
SinI GGWCC 2 cut(s) 1631, 2977
SlaI CTCGAG 1 cut(s) 1799
SmiMI CAYNNNNRTG 1 cut(s) 1656
SmlI CTYRAG 6 cut(s) 40, 225, 890, 1799, 1862, 2972
SmoI CTYRAG 6 cut(s) 40, 225, 890, 1799, 1862, 2972
SpeI ACTAGT 1 cut(s) 433
SphI GCATGC 1 cut(s) 1903
SseBI AGGCCT 2 cut(s) 1428, 2301
SsiI CCGC 6 cut(s) 1126, 1893, 2538, 2668, 2928, 3108
SspI AATATT 1 cut(s) 731
StuI AGGCCT 2 cut(s) 1428, 2301
StyD4I CCNGG 2 cut(s) 1743, 2356
StyI CCWWGG 1 cut(s) 2412
TaaI ACNGT 5 cut(s) 1179, 1667, 2087, 2228, 2375
TaiI ACGT 5 cut(s) 771, 903, 925, 1721, 2183
TatI WGTACW 4 cut(s) 1417, 1564, 2082, 2205
TauI GCSGC 3 cut(s) 1129, 2541, 3111
TfiI GAWTC 9 cut(s) 515, 738, 1462, 1470, 2011, 2128, 2284, 2831, 3127
TscAI CASTG 1 cut(s) 2042
TseFI GTSAC 5 cut(s) 244, 257, 1823, 2192, 2730
TseI GCWGC 6 cut(s) 77, 234, 1539, 2670, 2723, 2742
Tsp45I GTSAC 5 cut(s) 244, 257, 1823, 2192, 2730
TspDTI ATGAA 9 cut(s) 100, 336, 495, 582, 741, 1166, 1462, 2091, 3133
TspGWI ACGGA 2 cut(s) 2507, 3129
TspRI CASTG 1 cut(s) 2042
Tth111I GACNNNGTC 1 cut(s) 1658
Van91I CCANNNNNTGG 4 cut(s) 1399, 1568, 1744, 2312
Vha464I CTTAAG 1 cut(s) 40
VpaK11BI GGWCC 2 cut(s) 1631, 2977
VspI ATTAAT 1 cut(s) 216
XapI RAATTY 8 cut(s) 107, 537, 931, 1111, 1451, 1484, 2564, 2880
XbaI TCTAGA 3 cut(s) 2200, 2629, 3082
XceI RCATGY 3 cut(s) 842, 1903, 2706
XhoI CTCGAG 1 cut(s) 1799
XmiI GTMKAC 2 cut(s) 427, 2707
XmnI GAANNNNTTC 4 cut(s) 285, 541, 1092, 2880
ZrmI AGTACT 2 cut(s) 1566, 2084
Zsp2I ATGCAT 1 cut(s) 2800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.