Rmu_co8438275.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8438275.1
Physical Location & Seq
Forward (+)
1 .. 1563
1563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8438275.1_g000001.1.cds

Sequence Viewer

Length: 1563 bp
aaatgcgaagaagtcccagcacttggtcagctgcccaatcttgtacatgtgaagatgaaaaccatggagaatctgaagtgtttgggatatgagttttatggttatgatcacgaatctgatgatacaaaggttttgtttcgtgcattgaaaacattatatattcaggaggtgagaagcctaattgaatggatggaagtgccaacaggaagagtgacggtgtttccttgcctgaaggagttggccctgaaaggttgcgaccaactgagaagtgctcccagtcattttccatgtctgaaaaagttggtgattaaaggcatgaatagcggaggcagtccaatagcaagtattctaagcaataaactgaccactctcacttctctcaagattcgcaatgtgaggggacttgcctgtctgccaggaaggttgttagaaaacaaccagaatctttcatgtatgctgatagatgattgtgaggagtttacttgtattgctcctccccaatcacaagggtttgagtactgctgcgcgtctcttcaggaactgacaattagggggtgtcctaagctgaggtgtttacctgattatgggctctctcttgagaagttggagataataaattgctccagtctagagtccatccctatcatccctgagcacggtggtctcccatctctacgcgaattgcggatcctagcatgtcctgagttatccagtctacctgatgggctccaatactgcacatctcttcaaattttgctaatacggagctgcccaaagataacgtccattccaattccatctgagggcctcccatcccttgattggctgtctctttccgagtgtcctgaattagcaagcctacccagtggactaggctgctgcacctctcttgttactttggtggtagcaacgtgccctaagctaacatccattccaatttgcggcttcacatccctccgactcttgtatgtaagtaatctagagtctcttccaggtttacacggcggcttcacatccctccgtcgattgggaatctatggatgtcaaggtacacaaattgatctgcaattttgtgcctctcttgaggggttgggcatatcagactgtccaaatctagagactgttcgaagtttagacaagctcacatccctccgtgagttgaggattactgattgttcccgattgacatgtctacccagtgggttagcaatggcatccccacacgtattcacccgtctcaagtacttgacacttggtccgttttggaatgagctggattatgattttcaggttctaccacaacttgaagaattaagtatctacgggtggccgaagctcaagtctctgcctgaacaaactcaacacttgacgtctttgaccacattgtggataagtgactttgagggattggaggctattccagaatggttgggaaaccttgcatctcttcaattcttaagaattaagaattgcaagaatctggtgtatctaccttccgtccaagctatgcaccgcctcaccaaattagatcggatacggatcgacaattgtccccttttgagc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

521

Amino Acids

57.8

Weight (kDa)

6.14

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 408
AatII GACGTC 1 cut(s) 1373
AccB7I CCANNNNNTGG 2 cut(s) 23, 1386
AccI GTMKAC 2 cut(s) 715, 1192
AccII CGCG 2 cut(s) 527, 678
AciI CCGC 5 cut(s) 324, 685, 942, 1005, 1513
AclWI GGATC 3 cut(s) 682, 695, 1547
AcoI YGGCCR 1 cut(s) 1328
AcsI RAATTY 1 cut(s) 750
AcuI CTGAAG 3 cut(s) 95, 251, 518
AcyI GRCGYC 1 cut(s) 1370
AdeI CACNNNGTG 1 cut(s) 1386
AfaI GTAC 4 cut(s) 45, 518, 1051, 1244
AfiI CCNNNNNNNGG 8 cut(s) 23, 584, 656, 803, 822, 941, 1027, 1386
AflII CTTAAG 1 cut(s) 1456
AflIII ACRYGT 3 cut(s) 46, 1187, 1222
AgsI TTSAA 5 cut(s) 148, 185, 749, 1307, 1451
AhdI GACNNNNNGTC 1 cut(s) 1254
AjnI CCWGG 2 cut(s) 415, 991
AluBI AGCT 8 cut(s) 31, 565, 768, 922, 1141, 1273, 1336, 1505
AluI AGCT 8 cut(s) 31, 565, 768, 922, 1141, 1273, 1336, 1505
Alw21I GWGCWC 2 cut(s) 274, 657
Alw26I GTCTC 7 cut(s) 534, 668, 834, 990, 1112, 1241, 1347
AlwI GGATC 3 cut(s) 682, 695, 1547
AlwNI CAGNNNCTG 1 cut(s) 541
AoxI GGCC 3 cut(s) 240, 805, 1328
ApeKI GCWGC 5 cut(s) 31, 522, 768, 876, 879
ApoI RAATTY 1 cut(s) 750
ArsI GACNNNNNNTTYG 4 cut(s) 767, 799, 1325, 1357
AspLEI GCGC 1 cut(s) 527
AspS9I GGNCC 3 cut(s) 241, 805, 1256
AsuHPI GGTGA 4 cut(s) 181, 316, 1222, 1510
AsuII TTCGAA 1 cut(s) 1126
AvaII GGWCC 1 cut(s) 1256
BaeGI GKGCMC 1 cut(s) 917
BaeI ACNNNNGTAYC 2 cut(s) 114, 147
BamHI GGATCC 1 cut(s) 687
BanII GRGCYC 2 cut(s) 591, 729
Bbv12I GWGCWC 2 cut(s) 274, 657
BbvCI CCTCAGC 1 cut(s) 566
BbvI GCAGC 5 cut(s) 18, 509, 755, 863, 866
BccI CCATC 6 cut(s) 184, 644, 676, 716, 805, 820
BceAI ACGGC 1 cut(s) 1018
BciT130I CCWGG 2 cut(s) 417, 993
BciVI GTATCC 1 cut(s) 1527
BclI TGATCA 1 cut(s) 106
BcoDI GTCTC 7 cut(s) 534, 668, 834, 990, 1112, 1241, 1347
BfaI CTAG 5 cut(s) 629, 692, 872, 980, 1115
BfrI CTTAAG 1 cut(s) 1456
BfuI GTATCC 1 cut(s) 1527
BisI GCNGC 7 cut(s) 32, 523, 769, 877, 880, 943, 1006
BlsI GCNGC 7 cut(s) 33, 524, 770, 878, 881, 944, 1007
BmcAI AGTACT 2 cut(s) 518, 1244
Bme1390I CCNGG 2 cut(s) 417, 993
Bme18I GGWCC 1 cut(s) 1256
BmeRI GACNNNNNGTC 1 cut(s) 1254
BmgT120I GGNCC 3 cut(s) 241, 805, 1256
BmiI GGNNCC 2 cut(s) 689, 728
BmrFI CCNGG 2 cut(s) 417, 993
BmrI ACTGGG 3 cut(s) 270, 858, 1191
BmsI GCATC 2 cut(s) 1223, 1451
BmuI ACTGGG 3 cut(s) 270, 858, 1191
BoxI GACNNNNGTC 1 cut(s) 1548
BplI GAGNNNNNCTC 2 cut(s) 256, 288
BpmI CTGGAG 1 cut(s) 607
Bpu10I CCTNAGC 4 cut(s) 561, 566, 651, 918
Bpu14I TTCGAA 1 cut(s) 1126
BpuEI CTTGAG 5 cut(s) 365, 617, 1103, 1223, 1322
BsaAI YACGTR 1 cut(s) 1225
BsaBI GATNNNNATC 1 cut(s) 1538
BsaHI GRCGYC 1 cut(s) 1370
BsaI GGTCTC 1 cut(s) 668
BsaJI CCNNGG 1 cut(s) 63
Bsc4I CCNNNNNNNGG 8 cut(s) 23, 584, 656, 803, 822, 941, 1027, 1386
Bse1I ACTGG 5 cut(s) 276, 624, 711, 864, 1197
Bse3DI GCAATG 2 cut(s) 397, 1215
Bse8I GATNNNNATC 1 cut(s) 1538
BseBI CCWGG 2 cut(s) 417, 993
BseDI CCNNGG 1 cut(s) 63
BseJI GATNNNNATC 1 cut(s) 1538
BseLI CCNNNNNNNGG 8 cut(s) 23, 584, 656, 803, 822, 941, 1027, 1386
BseMI GCAATG 2 cut(s) 397, 1215
BseMII CTCAG 5 cut(s) 254, 557, 642, 693, 792
BseNI ACTGG 5 cut(s) 276, 624, 711, 864, 1197
BseRI GAGGAG 2 cut(s) 483, 488
BseSI GKGCMC 1 cut(s) 917
BseXI GCAGC 5 cut(s) 18, 509, 755, 863, 866
BseYI CCCAGC 1 cut(s) 16
BsgI GTGCAG 2 cut(s) 721, 865
Bsh1236I CGCG 2 cut(s) 527, 678
BshFI GGCC 3 cut(s) 242, 807, 1330
BsiHKAI GWGCWC 2 cut(s) 274, 657
BslFI GGGAC 2 cut(s) 414, 1536
BslI CCNNNNNNNGG 8 cut(s) 23, 584, 656, 803, 822, 941, 1027, 1386
BsmAI GTCTC 7 cut(s) 534, 668, 834, 990, 1112, 1241, 1347
BsmBI CGTCTC 2 cut(s) 534, 1241
BsmFI GGGAC 2 cut(s) 414, 1536
BsnI GGCC 3 cut(s) 242, 807, 1330
Bso31I GGTCTC 1 cut(s) 668
Bsp119I TTCGAA 1 cut(s) 1126
Bsp1286I GDGCHC 5 cut(s) 274, 591, 657, 729, 917
Bsp1407I TGTACA 1 cut(s) 43
Bsp143I GATC 5 cut(s) 106, 687, 1060, 1528, 1539
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 5 cut(s) 324, 685, 942, 1005, 1513
BspANI GGCC 3 cut(s) 242, 807, 1330
BspCNI CTCAG 5 cut(s) 255, 558, 643, 694, 793
BspFNI CGCG 2 cut(s) 527, 678
BspLI GGNNCC 2 cut(s) 689, 728
BspPI GGATC 3 cut(s) 682, 695, 1547
BspT104I TTCGAA 1 cut(s) 1126
BspTI CTTAAG 1 cut(s) 1456
BspTNI GGTCTC 1 cut(s) 668
BsrDI GCAATG 2 cut(s) 397, 1215
BsrGI TGTACA 1 cut(s) 43
BsrI ACTGG 5 cut(s) 276, 624, 711, 864, 1197
BssECI CCNNGG 1 cut(s) 63
BssMI GATC 5 cut(s) 106, 687, 1060, 1528, 1539
BssNI GRCGYC 1 cut(s) 1370
BssT1I CCWWGG 1 cut(s) 63
Bst2UI CCWGG 2 cut(s) 417, 993
Bst4CI ACNGT 4 cut(s) 217, 659, 1106, 1123
Bst6I CTCTTC 5 cut(s) 202, 537, 750, 993, 1452
BstACI GRCGYC 1 cut(s) 1370
BstAFI CTTAAG 1 cut(s) 1456
BstAUI TGTACA 1 cut(s) 43
BstBAI YACGTR 1 cut(s) 1225
BstBI TTCGAA 1 cut(s) 1126
BstC8I GCNNGC 1 cut(s) 856
BstDEI CTNAG 8 cut(s) 263, 350, 561, 566, 651, 702, 801, 918
BstDSI CCRYGG 1 cut(s) 63
BstFNI CGCG 2 cut(s) 527, 678
BstHHI GCGC 1 cut(s) 527
BstKTI GATC 5 cut(s) 109, 690, 1063, 1531, 1542
BstMAI GTCTC 7 cut(s) 534, 668, 834, 990, 1112, 1241, 1347
BstMBI GATC 5 cut(s) 106, 687, 1060, 1528, 1539
BstMWI GCNNNNNNNGC 1 cut(s) 321
BstNI CCWGG 2 cut(s) 417, 993
BstNSI RCATGY 3 cut(s) 50, 699, 1191
BstPAI GACNNNNGTC 1 cut(s) 1548
BstSCI CCNGG 2 cut(s) 415, 991
BstSLI GKGCMC 1 cut(s) 917
BstUI CGCG 2 cut(s) 527, 678
BstV1I GCAGC 5 cut(s) 18, 509, 755, 863, 866
BstX2I RGATCY 1 cut(s) 687
BstYI RGATCY 1 cut(s) 687
BsuI GTATCC 1 cut(s) 1527
BsuRI GGCC 3 cut(s) 242, 807, 1330
BtgI CCRYGG 1 cut(s) 63
BtsIMutI CAGTG 2 cut(s) 871, 1204
Cac8I GCNNGC 1 cut(s) 856
CaiI CAGNNNCTG 1 cut(s) 541
CfoI GCGC 1 cut(s) 527
Cfr13I GGNCC 3 cut(s) 241, 805, 1256
CseI GACGC 1 cut(s) 516
Csp6I GTAC 4 cut(s) 44, 517, 1050, 1243
CviAII CATG 7 cut(s) 47, 64, 288, 316, 450, 696, 1188
CviQI GTAC 4 cut(s) 44, 517, 1050, 1243
DdeI CTNAG 8 cut(s) 263, 350, 561, 566, 651, 702, 801, 918
DpnI GATC 5 cut(s) 108, 689, 1062, 1530, 1541
DpnII GATC 5 cut(s) 106, 687, 1060, 1528, 1539
DraIII CACNNNGTG 1 cut(s) 1386
DrdI GACNNNNNNGTC 1 cut(s) 408
DriI GACNNNNNGTC 1 cut(s) 1254
DseDI GACNNNNNNGTC 1 cut(s) 408
EaeI YGGCCR 1 cut(s) 1328
Eam1104I CTCTTC 5 cut(s) 202, 537, 750, 993, 1452
Eam1105I GACNNNNNGTC 1 cut(s) 1254
EarI CTCTTC 5 cut(s) 202, 537, 750, 993, 1452
Eco130I CCWWGG 1 cut(s) 63
Eco24I GRGCYC 2 cut(s) 591, 729
Eco31I GGTCTC 1 cut(s) 668
Eco47I GGWCC 1 cut(s) 1256
Eco57I CTGAAG 3 cut(s) 95, 251, 518
EcoO109I RGGNCCY 1 cut(s) 805
EcoRII CCWGG 2 cut(s) 415, 991
EcoT14I CCWWGG 1 cut(s) 63
EcoT38I GRGCYC 2 cut(s) 591, 729
ErhI CCWWGG 1 cut(s) 63
Esp3I CGTCTC 2 cut(s) 534, 1241
FaeI CATG 7 cut(s) 50, 67, 291, 319, 453, 699, 1191
FaqI GGGAC 2 cut(s) 414, 1536
FatI CATG 7 cut(s) 46, 63, 287, 315, 449, 695, 1187
FbaI TGATCA 1 cut(s) 106
FblI GTMKAC 2 cut(s) 715, 1192
Fnu4HI GCNGC 7 cut(s) 32, 523, 769, 877, 880, 943, 1006
FriOI GRGCYC 2 cut(s) 591, 729
Fsp4HI GCNGC 7 cut(s) 32, 523, 769, 877, 880, 943, 1006
FspBI CTAG 5 cut(s) 629, 692, 872, 980, 1115
GlaI GCGC 1 cut(s) 526
GluI GCNGC 7 cut(s) 32, 523, 769, 877, 880, 943, 1006
GsaI CCCAGC 1 cut(s) 20
GsuI CTGGAG 1 cut(s) 607
HaeIII GGCC 3 cut(s) 242, 807, 1330
HgaI GACGC 1 cut(s) 516
HhaI GCGC 1 cut(s) 527
Hin1I GRCGYC 1 cut(s) 1370
Hin1II CATG 7 cut(s) 50, 67, 291, 319, 453, 699, 1191
Hin6I GCGC 1 cut(s) 525
HinP1I GCGC 1 cut(s) 525
HinfI GANTC 9 cut(s) 70, 113, 385, 442, 632, 960, 983, 1032, 1477
HphI GGTGA 4 cut(s) 181, 316, 1222, 1510
Hpy166II GTNNAC 7 cut(s) 480, 575, 716, 869, 998, 1052, 1193
Hpy188I TCNGA 8 cut(s) 75, 118, 294, 802, 838, 959, 1102, 1533
Hpy8I GTNNAC 7 cut(s) 480, 575, 716, 869, 998, 1052, 1193
Hpy99I CGWCG 1 cut(s) 1026
HpyAV CCTTC 3 cut(s) 226, 414, 1503
HpyCH4III ACNGT 4 cut(s) 217, 659, 1106, 1123
HpyCH4IV ACGT 4 cut(s) 782, 911, 1224, 1370
HpyCH4V TGCA 7 cut(s) 143, 738, 882, 1066, 1442, 1473, 1510
HpyF10VI GCNNNNNNNGC 1 cut(s) 321
HpyF3I CTNAG 8 cut(s) 263, 350, 561, 566, 651, 702, 801, 918
HpySE526I ACGT 4 cut(s) 782, 911, 1224, 1370
Hsp92I GRCGYC 1 cut(s) 1370
Hsp92II CATG 7 cut(s) 50, 67, 291, 319, 453, 699, 1191
HspAI GCGC 1 cut(s) 525
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 5 cut(s) 106, 687, 1060, 1528, 1539
LmnI GCTCC 5 cut(s) 277, 496, 626, 732, 765
Lsp1109I GCAGC 5 cut(s) 18, 509, 755, 863, 866
LweI GCATC 2 cut(s) 1223, 1451
MaeI CTAG 5 cut(s) 629, 692, 872, 980, 1115
MaeII ACGT 4 cut(s) 782, 911, 1224, 1370
MaeIII GTNAC 3 cut(s) 211, 892, 1394
MalI GATC 5 cut(s) 108, 689, 1062, 1530, 1541
MboI GATC 5 cut(s) 106, 687, 1060, 1528, 1539
MboII GAAGA 8 cut(s) 20, 64, 219, 524, 737, 980, 1319, 1439
MfeI CAATTG 1 cut(s) 1546
MflI RGATCY 1 cut(s) 687
MhlI GDGCHC 5 cut(s) 274, 591, 657, 729, 917
MlyI GAGTC 3 cut(s) 641, 954, 992
MmeI TCCRAC 2 cut(s) 585, 982
MseI TTAA 4 cut(s) 309, 1313, 1457, 1464
MspA1I CMGCKG 1 cut(s) 31
MspCI CTTAAG 1 cut(s) 1456
MspR9I CCNGG 2 cut(s) 417, 993
MunI CAATTG 1 cut(s) 1546
MvaI CCWGG 2 cut(s) 417, 993
MvnI CGCG 2 cut(s) 527, 678
MwoI GCNNNNNNNGC 1 cut(s) 321
NcoI CCATGG 1 cut(s) 63
NdeII GATC 5 cut(s) 106, 687, 1060, 1528, 1539
NlaIII CATG 7 cut(s) 50, 67, 291, 319, 453, 699, 1191
NlaIV GGNNCC 2 cut(s) 689, 728
NmuCI GTSAC 2 cut(s) 211, 1394
NspI RCATGY 3 cut(s) 50, 699, 1191
NspV TTCGAA 1 cut(s) 1126
PciI ACATGT 2 cut(s) 46, 1187
PfeI GAWTC 6 cut(s) 70, 113, 385, 442, 1032, 1477
PflMI CCANNNNNTGG 2 cut(s) 23, 1386
PkrI GCNGC 7 cut(s) 33, 524, 770, 878, 881, 944, 1007
PleI GAGTC 3 cut(s) 640, 954, 991
PpsI GAGTC 3 cut(s) 640, 954, 991
Ppu21I YACGTR 1 cut(s) 1225
PscI ACATGT 2 cut(s) 46, 1187
PshAI GACNNNNGTC 1 cut(s) 1548
Psp6I CCWGG 2 cut(s) 415, 991
PspFI CCCAGC 1 cut(s) 16
PspGI CCWGG 2 cut(s) 415, 991
PspN4I GGNNCC 2 cut(s) 689, 728
PspPI GGNCC 3 cut(s) 241, 805, 1256
PstNI CAGNNNCTG 1 cut(s) 541
PsuI RGATCY 1 cut(s) 687
PvuII CAGCTG 1 cut(s) 31
RsaI GTAC 4 cut(s) 45, 518, 1051, 1244
RsaNI GTAC 4 cut(s) 44, 517, 1050, 1243
SaqAI TTAA 4 cut(s) 309, 1313, 1457, 1464
SatI GCNGC 7 cut(s) 32, 523, 769, 877, 880, 943, 1006
Sau3AI GATC 5 cut(s) 106, 687, 1060, 1528, 1539
Sau96I GGNCC 3 cut(s) 241, 805, 1256
ScaI AGTACT 2 cut(s) 518, 1244
SchI GAGTC 3 cut(s) 641, 954, 992
ScrFI CCNGG 2 cut(s) 417, 993
SduI GDGCHC 5 cut(s) 274, 591, 657, 729, 917
SfaNI GCATC 2 cut(s) 1223, 1451
SfuI TTCGAA 1 cut(s) 1126
SinI GGWCC 1 cut(s) 1256
SmlI CTYRAG 6 cut(s) 380, 596, 1082, 1238, 1337, 1456
SmoI CTYRAG 6 cut(s) 380, 596, 1082, 1238, 1337, 1456
SsiI CCGC 5 cut(s) 324, 685, 942, 1005, 1513
SspMI CTAG 5 cut(s) 629, 692, 872, 980, 1115
StyD4I CCNGG 2 cut(s) 415, 991
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 4 cut(s) 217, 659, 1106, 1123
TaiI ACGT 4 cut(s) 785, 914, 1227, 1373
TaqI TCGA 3 cut(s) 1024, 1126, 1542
TatI WGTACW 3 cut(s) 43, 516, 1242
TauI GCSGC 2 cut(s) 945, 1008
TfiI GAWTC 6 cut(s) 70, 113, 385, 442, 1032, 1477
Tru1I TTAA 4 cut(s) 309, 1313, 1457, 1464
Tru9I TTAA 4 cut(s) 309, 1313, 1457, 1464
TscAI CASTG 2 cut(s) 871, 1204
TseFI GTSAC 2 cut(s) 211, 1394
TseI GCWGC 5 cut(s) 31, 522, 768, 876, 879
Tsp45I GTSAC 2 cut(s) 211, 1394
TspDTI ATGAA 3 cut(s) 71, 332, 438
TspGWI ACGGA 6 cut(s) 778, 1010, 1142, 1248, 1486, 1552
TspRI CASTG 2 cut(s) 871, 1204
Van91I CCANNNNNTGG 2 cut(s) 23, 1386
Vha464I CTTAAG 1 cut(s) 1456
VpaK11BI GGWCC 1 cut(s) 1256
XapI RAATTY 1 cut(s) 750
XbaI TCTAGA 3 cut(s) 628, 979, 1114
XceI RCATGY 3 cut(s) 50, 699, 1191
XcmI CCANNNNNNNNNTGG 1 cut(s) 819
XmiI GTMKAC 2 cut(s) 715, 1192
XspI CTAG 5 cut(s) 629, 692, 872, 980, 1115
ZraI GACGTC 1 cut(s) 1371
ZrmI AGTACT 2 cut(s) 518, 1244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.