disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 12 - 94 | 7.6e-11 | Rx N-terminal domain |
| NB-ARC | PF00931 | 183 - 361 | 4.4e-33 | NB-ARC domain |
| AAA_22 | PF13401 | 205 - 322 | 3.1e-07 | AAA domain |
| NACHT | PF05729 | 205 - 340 | 5.9e-06 | NACHT domain |
| WHD_DRP | PF23559 | 451 - 528 | 2.4e-21 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 572 - 828 | 1.8e-28 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 699 - 829 | 4.1e-30 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 984 - 1075 | 1.3e-07 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1001 - 1065 | 2.1e-07 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 224, 237, 290 |
| Acc16I | TGCGCA | 1 cut(s) | 2843 |
| Acc36I | ACCTGC | 1 cut(s) | 1231 |
| Acc65I | GGTACC | 1 cut(s) | 2245 |
| AccB1I | GGYRCC | 1 cut(s) | 2245 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2326 |
| AccI | GTMKAC | 1 cut(s) | 2707 |
| AccII | CGCG | 1 cut(s) | 105 |
| AccIII | TCCGGA | 2 cut(s) | 2463, 3191 |
| AciI | CCGC | 5 cut(s) | 27, 103, 193, 481, 1160 |
| AclWI | GGATC | 6 cut(s) | 555, 1076, 1277, 1375, 2447, 2688 |
| AcoI | YGGCCR | 1 cut(s) | 618 |
| AcsI | RAATTY | 7 cut(s) | 512, 940, 1766, 1969, 2012, 2745, 3003 |
| AcuI | CTGAAG | 5 cut(s) | 198, 1086, 1859, 2379, 2519 |
| AfaI | GTAC | 8 cut(s) | 9, 704, 873, 2247, 2271, 2778, 2797, 3179 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1421, 2266, 2326, 2737 |
| AflII | CTTAAG | 3 cut(s) | 1786, 2209, 2959 |
| AflIII | ACRYGT | 3 cut(s) | 1654, 1780, 2155 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2494 |
| AjnI | CCWGG | 1 cut(s) | 303 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 810, 842, 2174, 2206, 2796, 2828 |
| Alw21I | GWGCWC | 1 cut(s) | 2199 |
| Alw44I | GTGCAC | 1 cut(s) | 2195 |
| AlwI | GGATC | 6 cut(s) | 555, 1076, 1277, 1375, 2447, 2688 |
| Ama87I | CYCGRG | 1 cut(s) | 1346 |
| Aor13HI | TCCGGA | 2 cut(s) | 2463, 3191 |
| AoxI | GGCC | 7 cut(s) | 201, 618, 637, 2128, 2975, 3232, 3242 |
| ApaLI | GTGCAC | 1 cut(s) | 2195 |
| ApeKI | GCWGC | 5 cut(s) | 29, 164, 416, 461, 464 |
| ApoI | RAATTY | 7 cut(s) | 512, 940, 1766, 1969, 2012, 2745, 3003 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 512, 603, 1008, 2808 |
| Asp718I | GGTACC | 1 cut(s) | 2245 |
| AspA2I | CCTAGG | 3 cut(s) | 640, 1013, 2503 |
| AspLEI | GCGC | 2 cut(s) | 1719, 2844 |
| AspS9I | GGNCC | 5 cut(s) | 201, 1053, 2087, 3233, 3243 |
| AvaI | CYCGRG | 1 cut(s) | 1346 |
| AvaII | GGWCC | 2 cut(s) | 1053, 2087 |
| AvrII | CCTAGG | 3 cut(s) | 640, 1013, 2503 |
| BaeGI | GKGCMC | 1 cut(s) | 2199 |
| BalI | TGGCCA | 1 cut(s) | 620 |
| BanI | GGYRCC | 1 cut(s) | 2245 |
| BanII | GRGCYC | 2 cut(s) | 2517, 2658 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3167, 3199 |
| BbsI | GAAGAC | 2 cut(s) | 1142, 2882 |
| Bbv12I | GWGCWC | 1 cut(s) | 2199 |
| BbvI | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| BccI | CCATC | 7 cut(s) | 355, 610, 1387, 1419, 1627, 2159, 2405 |
| BceAI | ACGGC | 2 cut(s) | 2440, 2778 |
| BciT130I | CCWGG | 1 cut(s) | 305 |
| BciVI | GTATCC | 1 cut(s) | 1603 |
| BclI | TGATCA | 2 cut(s) | 70, 1974 |
| BfmI | CTRYAG | 2 cut(s) | 1512, 2799 |
| BfrI | CTTAAG | 3 cut(s) | 1786, 2209, 2959 |
| BfuAI | ACCTGC | 1 cut(s) | 1231 |
| BfuI | GTATCC | 1 cut(s) | 1603 |
| BglII | AGATCT | 3 cut(s) | 1105, 1858, 3265 |
| BisI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| BlnI | CCTAGG | 3 cut(s) | 640, 1013, 2503 |
| BlsI | GCNGC | 6 cut(s) | 31, 166, 418, 463, 466, 1162 |
| Bme1390I | CCNGG | 1 cut(s) | 305 |
| Bme18I | GGWCC | 2 cut(s) | 1053, 2087 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2494 |
| BmeT110I | CYCGRG | 1 cut(s) | 1346 |
| BmgT120I | GGNCC | 5 cut(s) | 201, 1053, 2087, 3233, 3243 |
| BmiI | GGNNCC | 6 cut(s) | 101, 1357, 1668, 2247, 2286, 2657 |
| BmrFI | CCNGG | 1 cut(s) | 305 |
| BpiI | GAAGAC | 2 cut(s) | 1142, 2882 |
| BpmI | CTGGAG | 2 cut(s) | 816, 821 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2979 |
| BsaAI | YACGTR | 1 cut(s) | 1781 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2438 |
| BsaI | GGTCTC | 2 cut(s) | 290, 1750 |
| BsaJI | CCNNGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| BsaWI | WCCGGW | 3 cut(s) | 2463, 2779, 3191 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 30, 2355, 2358, 2385, 2388 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1421, 2266, 2326, 2737 |
| Bse118I | RCCGGY | 1 cut(s) | 32 |
| Bse1I | ACTGG | 3 cut(s) | 420, 799, 3235 |
| Bse3DI | GCAATG | 3 cut(s) | 1128, 1210, 2788 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2438 |
| BseAI | TCCGGA | 2 cut(s) | 2463, 3191 |
| BseBI | CCWGG | 1 cut(s) | 305 |
| BseDI | CCNNGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| BseJI | GATNNNNATC | 1 cut(s) | 2438 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1421, 2266, 2326, 2737 |
| BseMI | GCAATG | 3 cut(s) | 1128, 1210, 2788 |
| BseMII | CTCAG | 4 cut(s) | 678, 1794, 3060, 3095 |
| BseNI | ACTGG | 3 cut(s) | 420, 799, 3235 |
| BseRI | GAGGAG | 6 cut(s) | 2093, 2379, 2750, 2753, 2798, 2918 |
| BseSI | GKGCMC | 1 cut(s) | 2199 |
| BseXI | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| BseYI | CCCAGC | 2 cut(s) | 2021, 2420 |
| BsgI | GTGCAG | 3 cut(s) | 480, 2509, 2650 |
| Bsh1236I | CGCG | 1 cut(s) | 105 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2822 |
| BshFI | GGCC | 7 cut(s) | 203, 620, 639, 2130, 2977, 3234, 3244 |
| BshNI | GGYRCC | 1 cut(s) | 2245 |
| BsiEI | CGRYCG | 1 cut(s) | 2822 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2199 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1346 |
| BsiSI | CCGG | 4 cut(s) | 33, 2464, 2780, 3192 |
| BslFI | GGGAC | 5 cut(s) | 441, 1139, 2403, 3066, 3183 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1421, 2266, 2326, 2737 |
| BsmBI | CGTCTC | 2 cut(s) | 359, 2463 |
| BsmFI | GGGAC | 5 cut(s) | 441, 1139, 2403, 3066, 3183 |
| BsmI | GAATGC | 1 cut(s) | 774 |
| BsnI | GGCC | 7 cut(s) | 203, 620, 639, 2130, 2977, 3234, 3244 |
| Bso31I | GGTCTC | 2 cut(s) | 290, 1750 |
| BsoBI | CYCGRG | 1 cut(s) | 1346 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2199, 2517, 2658 |
| Bsp13I | TCCGGA | 2 cut(s) | 2463, 3191 |
| BspACI | CCGC | 5 cut(s) | 27, 103, 193, 481, 1160 |
| BspANI | GGCC | 7 cut(s) | 203, 620, 639, 2130, 2977, 3234, 3244 |
| BspCNI | CTCAG | 4 cut(s) | 677, 1795, 3061, 3096 |
| BspEI | TCCGGA | 2 cut(s) | 2463, 3191 |
| BspFNI | CGCG | 1 cut(s) | 105 |
| BspHI | TCATGA | 3 cut(s) | 169, 1627, 1642 |
| BspLI | GGNNCC | 6 cut(s) | 101, 1357, 1668, 2247, 2286, 2657 |
| BspMI | ACCTGC | 1 cut(s) | 1231 |
| BspPI | GGATC | 6 cut(s) | 555, 1076, 1277, 1375, 2447, 2688 |
| BspQI | GCTCTTC | 1 cut(s) | 3069 |
| BspT107I | GGYRCC | 1 cut(s) | 2245 |
| BspTI | CTTAAG | 3 cut(s) | 1786, 2209, 2959 |
| BspTNI | GGTCTC | 2 cut(s) | 290, 1750 |
| BsrDI | GCAATG | 3 cut(s) | 1128, 1210, 2788 |
| BsrFI | RCCGGY | 1 cut(s) | 32 |
| BsrI | ACTGG | 3 cut(s) | 420, 799, 3235 |
| BssAI | RCCGGY | 1 cut(s) | 32 |
| BssECI | CCNNGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| BssT1I | CCWWGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| Bst2UI | CCWGG | 1 cut(s) | 305 |
| Bst4CI | ACNGT | 3 cut(s) | 1199, 2400, 2848 |
| Bst6I | CTCTTC | 4 cut(s) | 102, 209, 2538, 3069 |
| BstAFI | CTTAAG | 3 cut(s) | 1786, 2209, 2959 |
| BstBAI | YACGTR | 1 cut(s) | 1781 |
| BstC8I | GCNNGC | 9 cut(s) | 34, 195, 367, 414, 661, 1835, 1904, 2188, 2453 |
| BstDEI | CTNAG | 7 cut(s) | 664, 1191, 1803, 1829, 2979, 3069, 3104 |
| BstEII | GGTNACC | 1 cut(s) | 1424 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2735 |
| BstFNI | CGCG | 1 cut(s) | 105 |
| BstHHI | GCGC | 2 cut(s) | 1719, 2844 |
| BstMCI | CGRYCG | 1 cut(s) | 2822 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 239, 330, 989, 2183 |
| BstNI | CCWGG | 1 cut(s) | 305 |
| BstNSI | RCATGY | 4 cut(s) | 416, 1658, 2159, 2455 |
| BstPI | GGTNACC | 1 cut(s) | 1424 |
| BstSCI | CCNGG | 1 cut(s) | 303 |
| BstSFI | CTRYAG | 2 cut(s) | 1512, 2799 |
| BstSLI | GKGCMC | 1 cut(s) | 2199 |
| BstUI | CGCG | 1 cut(s) | 105 |
| BstV1I | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| BstV2I | GAAGAC | 2 cut(s) | 1142, 2882 |
| BstX2I | RGATCY | 5 cut(s) | 1081, 1105, 1858, 2680, 3265 |
| BstYI | RGATCY | 5 cut(s) | 1081, 1105, 1858, 2680, 3265 |
| BsuI | GTATCC | 1 cut(s) | 1603 |
| BsuRI | GGCC | 7 cut(s) | 203, 620, 639, 2130, 2977, 3234, 3244 |
| BtsIMutI | CAGTG | 1 cut(s) | 427 |
| BveI | ACCTGC | 1 cut(s) | 1231 |
| Cac8I | GCNNGC | 9 cut(s) | 34, 195, 367, 414, 661, 1835, 1904, 2188, 2453 |
| CciI | TCATGA | 3 cut(s) | 169, 1627, 1642 |
| CfoI | GCGC | 2 cut(s) | 1719, 2844 |
| Cfr10I | RCCGGY | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 5 cut(s) | 201, 1053, 2087, 3233, 3243 |
| CseI | GACGC | 1 cut(s) | 2887 |
| Csp6I | GTAC | 8 cut(s) | 8, 703, 872, 2246, 2270, 2777, 2796, 3178 |
| CviQI | GTAC | 8 cut(s) | 8, 703, 872, 2246, 2270, 2777, 2796, 3178 |
| DdeI | CTNAG | 7 cut(s) | 664, 1191, 1803, 1829, 2979, 3069, 3104 |
| DraI | TTTAAA | 1 cut(s) | 3024 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2494 |
| EaeI | YGGCCR | 1 cut(s) | 618 |
| Eam1104I | CTCTTC | 4 cut(s) | 102, 209, 2538, 3069 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2494 |
| EarI | CTCTTC | 4 cut(s) | 102, 209, 2538, 3069 |
| Eco130I | CCWWGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| Eco147I | AGGCCT | 1 cut(s) | 639 |
| Eco24I | GRGCYC | 2 cut(s) | 2517, 2658 |
| Eco31I | GGTCTC | 2 cut(s) | 290, 1750 |
| Eco32I | GATATC | 3 cut(s) | 88, 1853, 2352 |
| Eco47I | GGWCC | 2 cut(s) | 1053, 2087 |
| Eco57I | CTGAAG | 5 cut(s) | 198, 1086, 1859, 2379, 2519 |
| Eco88I | CYCGRG | 1 cut(s) | 1346 |
| Eco91I | GGTNACC | 1 cut(s) | 1424 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2735 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2087 |
| EcoO65I | GGTNACC | 1 cut(s) | 1424 |
| EcoRI | GAATTC | 1 cut(s) | 512 |
| EcoRII | CCWGG | 1 cut(s) | 303 |
| EcoRV | GATATC | 3 cut(s) | 88, 1853, 2352 |
| EcoT14I | CCWWGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| EcoT22I | ATGCAT | 1 cut(s) | 1563 |
| EcoT38I | GRGCYC | 2 cut(s) | 2517, 2658 |
| ErhI | CCWWGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| Esp3I | CGTCTC | 2 cut(s) | 359, 2463 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 217, 249, 2174, 2206, 2192, 2224 |
| FaqI | GGGAC | 5 cut(s) | 441, 1139, 2403, 3066, 3183 |
| FauI | CCCGC | 2 cut(s) | 186, 474 |
| FauNDI | CATATG | 1 cut(s) | 781 |
| FbaI | TGATCA | 2 cut(s) | 70, 1974 |
| FblI | GTMKAC | 1 cut(s) | 2707 |
| Fnu4HI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| FriOI | GRGCYC | 2 cut(s) | 2517, 2658 |
| Fsp4HI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| FspAI | RTGCGCAY | 1 cut(s) | 2843 |
| FspI | TGCGCA | 1 cut(s) | 2843 |
| GlaI | GCGC | 2 cut(s) | 1718, 2843 |
| GluI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| GsaI | CCCAGC | 2 cut(s) | 2025, 2424 |
| GsuI | CTGGAG | 2 cut(s) | 816, 821 |
| HaeIII | GGCC | 7 cut(s) | 203, 620, 639, 2130, 2977, 3234, 3244 |
| HapII | CCGG | 4 cut(s) | 33, 2464, 2780, 3192 |
| HgaI | GACGC | 1 cut(s) | 2887 |
| HhaI | GCGC | 2 cut(s) | 1719, 2844 |
| Hin6I | GCGC | 2 cut(s) | 1717, 2842 |
| HinP1I | GCGC | 2 cut(s) | 1717, 2842 |
| HincII | GTYRAC | 2 cut(s) | 502, 2220 |
| HindII | GTYRAC | 2 cut(s) | 502, 2220 |
| HindIII | AAGCTT | 2 cut(s) | 1177, 2962 |
| HpaI | GTTAAC | 1 cut(s) | 2220 |
| HpaII | CCGG | 4 cut(s) | 33, 2464, 2780, 3192 |
| Hpy166II | GTNNAC | 4 cut(s) | 502, 2197, 2220, 2708 |
| Hpy8I | GTNNAC | 4 cut(s) | 502, 2197, 2220, 2708 |
| HpyCH4III | ACNGT | 3 cut(s) | 1199, 2400, 2848 |
| HpyCH4IV | ACGT | 2 cut(s) | 882, 1780 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 239, 330, 989, 2183 |
| HpyF3I | CTNAG | 7 cut(s) | 664, 1191, 1803, 1829, 2979, 3069, 3104 |
| HpySE526I | ACGT | 2 cut(s) | 882, 1780 |
| HspAI | GCGC | 2 cut(s) | 1717, 2842 |
| Kpn2I | TCCGGA | 2 cut(s) | 2463, 3191 |
| KpnI | GGTACC | 1 cut(s) | 2249 |
| KroI | GCCGGC | 1 cut(s) | 32 |
| KroNI | GCCGGC | 1 cut(s) | 34 |
| Ksp22I | TGATCA | 2 cut(s) | 70, 1974 |
| KspAI | GTTAAC | 1 cut(s) | 2220 |
| LguI | GCTCTTC | 1 cut(s) | 3069 |
| LmnI | GCTCC | 7 cut(s) | 797, 1096, 1343, 2661, 2785, 2886, 2905 |
| Lsp1109I | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| MaeII | ACGT | 2 cut(s) | 882, 1780 |
| MaeIII | GTNAC | 7 cut(s) | 667, 967, 1424, 2204, 2294, 2486, 2558 |
| MfeI | CAATTG | 4 cut(s) | 74, 1362, 2120, 3280 |
| MflI | RGATCY | 5 cut(s) | 1081, 1105, 1858, 2680, 3265 |
| MhlI | GDGCHC | 3 cut(s) | 2199, 2517, 2658 |
| MlsI | TGGCCA | 1 cut(s) | 620 |
| MluNI | TGGCCA | 1 cut(s) | 620 |
| MlyI | GAGTC | 8 cut(s) | 75, 423, 1024, 1474, 1901, 2212, 2438, 3107 |
| MmeI | TCCRAC | 4 cut(s) | 520, 612, 1408, 2609 |
| Mox20I | TGGCCA | 1 cut(s) | 620 |
| Mph1103I | ATGCAT | 1 cut(s) | 1563 |
| MroI | TCCGGA | 2 cut(s) | 2463, 3191 |
| MroNI | GCCGGC | 1 cut(s) | 32 |
| MroXI | GAANNNNTTC | 4 cut(s) | 512, 603, 1008, 2808 |
| MscI | TGGCCA | 1 cut(s) | 620 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2227 |
| Msp20I | TGGCCA | 1 cut(s) | 620 |
| MspA1I | CMGCKG | 2 cut(s) | 29, 2357 |
| MspCI | CTTAAG | 3 cut(s) | 1786, 2209, 2959 |
| MspI | CCGG | 4 cut(s) | 33, 2464, 2780, 3192 |
| MspR9I | CCNGG | 1 cut(s) | 305 |
| MunI | CAATTG | 4 cut(s) | 74, 1362, 2120, 3280 |
| Mva1269I | GAATGC | 1 cut(s) | 774 |
| MvaI | CCWGG | 1 cut(s) | 305 |
| MvnI | CGCG | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 239, 330, 989, 2183 |
| NaeI | GCCGGC | 1 cut(s) | 34 |
| NdeI | CATATG | 1 cut(s) | 781 |
| NgoMIV | GCCGGC | 1 cut(s) | 32 |
| NlaIV | GGNNCC | 6 cut(s) | 101, 1357, 1668, 2247, 2286, 2657 |
| NmeAIII | GCCGAG | 2 cut(s) | 300, 411 |
| NmuCI | GTSAC | 4 cut(s) | 967, 1424, 2204, 2486 |
| NsbI | TGCGCA | 1 cut(s) | 2843 |
| NsiI | ATGCAT | 1 cut(s) | 1563 |
| NspI | RCATGY | 4 cut(s) | 416, 1658, 2159, 2455 |
| PaeI | GCATGC | 2 cut(s) | 416, 2455 |
| PaeR7I | CTCGAG | 1 cut(s) | 1346 |
| PagI | TCATGA | 3 cut(s) | 169, 1627, 1642 |
| PceI | AGGCCT | 1 cut(s) | 639 |
| PciI | ACATGT | 2 cut(s) | 1654, 2155 |
| PciSI | GCTCTTC | 1 cut(s) | 3069 |
| PctI | GAATGC | 1 cut(s) | 774 |
| PdiI | GCCGGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 4 cut(s) | 512, 603, 1008, 2808 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2326 |
| PkrI | GCNGC | 6 cut(s) | 31, 166, 418, 463, 466, 1162 |
| PleI | GAGTC | 8 cut(s) | 75, 423, 1024, 1474, 1900, 2211, 2437, 3106 |
| PpsI | GAGTC | 8 cut(s) | 75, 423, 1024, 1474, 1900, 2211, 2437, 3106 |
| Ppu21I | YACGTR | 1 cut(s) | 1781 |
| PpuMI | RGGWCCY | 1 cut(s) | 2087 |
| PscI | ACATGT | 2 cut(s) | 1654, 2155 |
| PsiI | TTATAA | 3 cut(s) | 224, 237, 290 |
| Psp5II | RGGWCCY | 1 cut(s) | 2087 |
| Psp6I | CCWGG | 1 cut(s) | 303 |
| PspEI | GGTNACC | 1 cut(s) | 1424 |
| PspFI | CCCAGC | 2 cut(s) | 2021, 2420 |
| PspGI | CCWGG | 1 cut(s) | 303 |
| PspN4I | GGNNCC | 6 cut(s) | 101, 1357, 1668, 2247, 2286, 2657 |
| PspPI | GGNCC | 5 cut(s) | 201, 1053, 2087, 3233, 3243 |
| PspPPI | RGGWCCY | 1 cut(s) | 2087 |
| PsuI | RGATCY | 5 cut(s) | 1081, 1105, 1858, 2680, 3265 |
| PvuII | CAGCTG | 1 cut(s) | 2357 |
| RsaI | GTAC | 8 cut(s) | 9, 704, 873, 2247, 2271, 2778, 2797, 3179 |
| RsaNI | GTAC | 8 cut(s) | 8, 703, 872, 2246, 2270, 2777, 2796, 3178 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2227 |
| SapI | GCTCTTC | 1 cut(s) | 3069 |
| SatI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| Sau96I | GGNCC | 5 cut(s) | 201, 1053, 2087, 3233, 3243 |
| SchI | GAGTC | 8 cut(s) | 75, 423, 1024, 1474, 1901, 2212, 2438, 3107 |
| ScrFI | CCNGG | 1 cut(s) | 305 |
| SduI | GDGCHC | 3 cut(s) | 2199, 2517, 2658 |
| SfcI | CTRYAG | 2 cut(s) | 1512, 2799 |
| Sfr274I | CTCGAG | 1 cut(s) | 1346 |
| SinI | GGWCC | 2 cut(s) | 1053, 2087 |
| SlaI | CTCGAG | 1 cut(s) | 1346 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2227 |
| SphI | GCATGC | 2 cut(s) | 416, 2455 |
| SseBI | AGGCCT | 1 cut(s) | 639 |
| SsiI | CCGC | 5 cut(s) | 27, 103, 193, 481, 1160 |
| SspI | AATATT | 2 cut(s) | 604, 2476 |
| StuI | AGGCCT | 1 cut(s) | 639 |
| StyD4I | CCNGG | 1 cut(s) | 303 |
| StyI | CCWWGG | 8 cut(s) | 393, 640, 984, 1013, 1934, 2280, 2503, 3222 |
| TaaI | ACNGT | 3 cut(s) | 1199, 2400, 2848 |
| TaiI | ACGT | 2 cut(s) | 885, 1783 |
| TaqI | TCGA | 6 cut(s) | 84, 766, 1347, 1651, 2394, 2432 |
| TaqII | GACCGA | 1 cut(s) | 2808 |
| TatI | WGTACW | 2 cut(s) | 7, 871 |
| TauI | GCSGC | 1 cut(s) | 1163 |
| TscAI | CASTG | 1 cut(s) | 427 |
| TseFI | GTSAC | 4 cut(s) | 967, 1424, 2204, 2486 |
| TseI | GCWGC | 5 cut(s) | 29, 164, 416, 461, 464 |
| Tsp45I | GTSAC | 4 cut(s) | 967, 1424, 2204, 2486 |
| TspGWI | ACGGA | 2 cut(s) | 2279, 2331 |
| TspRI | CASTG | 1 cut(s) | 427 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2326 |
| Vha464I | CTTAAG | 3 cut(s) | 1786, 2209, 2959 |
| VneI | GTGCAC | 1 cut(s) | 2195 |
| VpaK11BI | GGWCC | 2 cut(s) | 1053, 2087 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2735 |
| XapI | RAATTY | 7 cut(s) | 512, 940, 1766, 1969, 2012, 2745, 3003 |
| XbaI | TCTAGA | 3 cut(s) | 1024, 1108, 1855 |
| XceI | RCATGY | 4 cut(s) | 416, 1658, 2159, 2455 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 628, 1418 |
| XhoI | CTCGAG | 1 cut(s) | 1346 |
| XmaJI | CCTAGG | 3 cut(s) | 640, 1013, 2503 |
| XmiI | GTMKAC | 1 cut(s) | 2707 |
| XmnI | GAANNNNTTC | 4 cut(s) | 512, 603, 1008, 2808 |
| Zsp2I | ATGCAT | 1 cut(s) | 1563 |