Rmu_ssc0000340.1_g000002

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000340.1
OG0000029
Physical Location & Seq
Reverse (-)
27076 .. 31118
4043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000340.1_g000002.1.cds

Sequence Viewer

Length: 3855 bp
atgtttgtactctctctccttgaatccgctgccggcgaagtagtgagtaaggtgacttcacttgctactgatcaattgagactcgatatcgtctgggggttccgcgaagagataaataagctcaaagaatcctcaactctgattggaaatataatacatgatgctgctcatgaacctgaagatcggaaactgcgggcaagggccgattggatgaagaggcttataagcgtagcttataatgcaaacgatattctggatgaaatagaatatgaagttcagcgtatcgttataaaggagaccagcctggataagaagatactcggcttcttctgcaacaatcctgttgtatttcgtctcaagatggcacgtaagatttacaacatcaacacatccttggatgatctctacaagcaagcagccagtgtgggactcggcatgacaaggagatcaaatggaggtgcagcagcaagtaaagataagcgggaaacaacctcattcgttgagaaaaatgaattcaccttgaaagatgcaaccattgttggaagggatcaggttgtgtcagatataattgcaaccttgacaaactccaacaatcaagaaaatattctttcggtgatggccattgtgggattgggaggcctaggtaaaacaactttggctcgctcagttaccaagcaactgaaagaaggtgaaatgaaaaggtactttgatgcaacattttgggtgtatgtatctaatacttttgatgtcaattcaattttacatcgaatgctggaatcatatgacgacgcgactggagcaaatctttcaagtcgggaagcattgattggaagcctccagcagaagttgaaagagagaaggtattttcttgtacttgatgacgtttggaatgaggatgctaataattgggatgatttgaagcgttgtctattgcaactaaattctgctaaaggaagctctgtgattgtcaccacccgtagtccattgccggcaaaggttttgggtagcttgatgcgttctaagaacagtagtaaggaatggttgtcaattttggaaagtaaaatatggcaagtatcatcagacaaagaggatagcaggatcatgtcggttttgaggttgagttttgactttttggaatcaccattgaaacaatgttttgcatattgctccatgctcgagaaaggttcctcaattaaaagagataacttgatccaactatggatggctcaaggttttctctatccttctcatgatcaccagagcaagcaagggattgaaatggaggatataggcaataagtattttgatactctactggagaactccttgtttcaagatgctacaaaggatgaggatggcgttatcactaaatgcaagatgcacgatcttttgcatgattgtgcaatagaagtatccgtgtgtgagagttggacaccagagttcgataatgagatggctgatggtgcgattcgacatgtcgcacggattcctactcaaaagctagaaagtatgccaaaaacaagtatttcaagactgcgatcactcttttcaaatggccctgtctctaataccattttccaaaagcttacaagtttacgtgtcttaagattctcttggcaagctgaagcacttgaggagttgccatattcacttggcaagctgaagcacctgaggtatctagatctttcacatacaaaaattgaagcactcccaaagtctattggcaagctctataacctccaaacattgagattaccgtggaatgtcagagagtgtccaaaggagattcaaaatttgatcaacttgaggcatttttactttgatgagggaatgaaatttgaggctgggattttggggcgattaactaatctccgaagattgcctttctttgaggtgggtgaggagagaggtcctgcaattaaggagttgggtgggttgaaccaattgagaggccacttaaatattcagaatctagaacatgtaagggacggagaagaagcaaagaaggctttcttagtggagaaaagtcacttaagtgagttgatttttgactggtcactcaggccaactaataacaatgagacggatgtactggatggcttggaacctcatggtaacttgcaaagcttgaagattcacaatttcatgggtgctagatttccgtcatggataacgagtctccaaaatttgaagacgagtctccaaaatttgaagaagattcagttatggggatgcggcaattttgaaggagtccaaacactcggtcacctgcctaatctaagatctcttaagattgaatggatggaaaagctgaaacgtgtgggagctgaggtttatggttatagtgatactagcacaactttatttccagctctgaaaacactatccatctcttggtgcctacagctcattgaatggatatcagctgaaggagaaatcgtggtatttccttgcctcgaagagttgagcatagataattgtcgcagactagagtcgattcggatcacacagggcatcgcatctctccgtgaattgaagatcagcaattgtttgagattatcaagcctagaggttgggctcgattactgcacctctcttcaggagttggagatacatgtttgccctgttctggtttcaattccaatcccacagggcatgccgtctctccggaaattgaatctcttcgcgtgtaatggattgtcaagcctaggaagtgggctcagctactgcacctctcttcaggagttggagataagggattgccatcatctggtttcaattccaatcccacagggcatgccgtctctccggaaattgacgattgaatggtgtaatggattgtcaagcctaggaagtgtgctcaactactgcacctctcttcaggaattggagataaagggttgttacaatctaacatcaattccaatcacacagggcatgccatctctccagatattgaggatctgcttttgtgcgggattatcaagcctaggaggtgggttcaactactgcacctctcttcaggaattggagataagggattgtgataatctaacatcaattccaatcacacagggcatcacatctctccggaggttgacgattctttgttgtgagagattattaagcctaccgagtgggctccaattctgcacctctcttaagtatctgacaataactcattgctctagtctagtatccatgtcagtatcatatgtgaagtgcgaccacccggactcaacgaatcaaccggaggaggaaatttctcaaggtgttgatgcgtatttgtctttaccggaggattgccgtactgtagaatctattccacctaatctccgtcacttgttgatatgtcattgtgggaaaataaaatatgtgcccacaggatttcaccacctcactcgtttgaagacgctccgaatgggtcccttctggaaagagctggacgccttccctgattttcagcttcctcctaattcacaacttgaagtgttacacttgacggggtggcctaagctcaagtctctgccccaacaaattcagcacttcacttgtctaagggttcttgagatgtattcatttaagggactagaggcttttcctgagtggttgggaaatcttacatctcttgagtctctgagtatctgcttctgtgagaatctcaagtatctgcctacacaaaatgctatgaaaaacctcaccaaattgaagcagctcgacattatagaatgtcccctgctcgaagaaagatgcaccaaggagattggcccagaatggcccaagatttctcacatcccagatcttcactttggcaattatatggtgaagaagcacatggctgccttactgaactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 ko04014 map03460 map04014
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1284

Amino Acids

145.35

Weight (kDa)

6.55

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 224, 237, 290
AarI CACCTGC 1 cut(s) 2277
Acc36I ACCTGC 1 cut(s) 2277
AccB1I GGYRCC 1 cut(s) 2397
AccB7I CCANNNNNTGG 2 cut(s) 2394, 2770
AccII CGCG 3 cut(s) 105, 791, 2687
AccIII TCCGGA 3 cut(s) 2667, 2808, 3090
AciI CCGC 6 cut(s) 27, 103, 193, 481, 2235, 2975
AclWI GGATC 5 cut(s) 555, 1106, 1204, 2510, 2969
AcoI YGGCCR 1 cut(s) 618
AcsI RAATTY 8 cut(s) 512, 940, 1792, 1835, 2185, 2206, 3261, 3537
AcuI CTGAAG 8 cut(s) 198, 1644, 1682, 2448, 2582, 2723, 2864, 3005
AcyI GRCGYC 1 cut(s) 3447
AfaI GTAC 5 cut(s) 9, 704, 873, 2091, 3310
AfiI CCNNNNNNNGG 3 cut(s) 2394, 2629, 2770
AflII CTTAAG 4 cut(s) 1603, 2032, 2288, 3161
AflIII ACRYGT 5 cut(s) 1474, 1597, 1978, 2317, 2614
AjnI CCWGG 1 cut(s) 303
AjuI GAANNNNNNNTTGG 2 cut(s) 810, 842
AleI CACNNNNGTG 1 cut(s) 2034
Alw21I GWGCWC 1 cut(s) 2862
AlwI GGATC 5 cut(s) 555, 1106, 1204, 2510, 2969
AlwNI CAGNNNCTG 1 cut(s) 2727
Ama87I CYCGRG 1 cut(s) 1175
Aor13HI TCCGGA 3 cut(s) 2667, 2808, 3090
AoxI GGCC 9 cut(s) 201, 618, 637, 1555, 1951, 2063, 3509, 3766, 3776
ApeKI GCWGC 7 cut(s) 29, 164, 416, 461, 464, 3712, 3839
ApoI RAATTY 8 cut(s) 512, 940, 1792, 1835, 2185, 2206, 3261, 3537
ArsI GACNNNNNNTTYG 2 cut(s) 2248, 2280
Asp700I GAANNNNTTC 4 cut(s) 603, 2009, 2681, 3321
AspA2I CCTAGG 4 cut(s) 640, 2707, 2848, 2989
AspS9I GGNCC 6 cut(s) 201, 1556, 1910, 3425, 3767, 3777
AsuC2I CCSGG 1 cut(s) 3233
AvaI CYCGRG 1 cut(s) 1175
AvaII GGWCC 2 cut(s) 1910, 3425
AvrII CCTAGG 4 cut(s) 640, 2707, 2848, 2989
AxyI CCTNAGG 1 cut(s) 1670
BaeGI GKGCMC 1 cut(s) 3381
BalI TGGCCA 1 cut(s) 620
BanI GGYRCC 1 cut(s) 2397
BanII GRGCYC 3 cut(s) 2580, 2721, 3144
BarI GAAGNNNNNNTAC 2 cut(s) 40, 72
BbsI GAAGAC 2 cut(s) 2198, 3416
Bbv12I GWGCWC 1 cut(s) 2862
BbvCI CCTCAGC 1 cut(s) 2328
BbvI GCAGC 7 cut(s) 16, 151, 428, 473, 476, 3724, 3826
BceAI ACGGC 3 cut(s) 2644, 2785, 3291
BciT130I CCWGG 1 cut(s) 305
BciVI GTATCC 2 cut(s) 1423, 3208
BclI TGATCA 3 cut(s) 70, 1252, 1797
BcnI CCSGG 1 cut(s) 3233
BfmI CTRYAG 2 cut(s) 2402, 3312
BfrI CTTAAG 4 cut(s) 1603, 2032, 2288, 3161
BfuAI ACCTGC 1 cut(s) 2277
BfuI GTATCC 2 cut(s) 1423, 3208
BglII AGATCT 3 cut(s) 1681, 2282, 3799
BisI GCNGC 8 cut(s) 30, 165, 417, 462, 465, 2236, 3713, 3840
BlnI CCTAGG 4 cut(s) 640, 2707, 2848, 2989
BlpI GCTNAGC 1 cut(s) 2720
BlsI GCNGC 8 cut(s) 31, 166, 418, 463, 466, 2237, 3714, 3841
Bme1390I CCNGG 2 cut(s) 305, 3233
Bme18I GGWCC 2 cut(s) 1910, 3425
BmeT110I CYCGRG 1 cut(s) 1175
BmgT120I GGNCC 6 cut(s) 201, 1556, 1910, 3425, 3767, 3777
BmiI GGNNCC 7 cut(s) 101, 1186, 2106, 2399, 3143, 3426, 3427
BmrFI CCNGG 2 cut(s) 305, 3233
BoxI GACNNNNGTC 1 cut(s) 2491
BpiI GAAGAC 2 cut(s) 2198, 3416
BpmI CTGGAG 4 cut(s) 816, 821, 1337, 2933
Bpu10I CCTNAGC 2 cut(s) 2328, 3513
Bpu1102I GCTNAGC 1 cut(s) 2720
BpuEI CTTGAG 9 cut(s) 341, 1212, 1652, 1825, 3252, 3503, 3587, 3647, 3650
BpuMI CCSGG 1 cut(s) 3233
BsaAI YACGTR 2 cut(s) 368, 1598
BsaBI GATNNNNATC 2 cut(s) 2501, 2763
BsaHI GRCGYC 1 cut(s) 3447
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 7 cut(s) 393, 640, 1757, 2707, 2848, 2989, 3756
BsaWI WCCGGW 5 cut(s) 2667, 2808, 3090, 3250, 3295
BsaXI ACNNNNNCTCC 7 cut(s) 30, 2316, 2346, 2424, 2454, 3318, 3348
Bsc4I CCNNNNNNNGG 3 cut(s) 2394, 2629, 2770
Bse118I RCCGGY 2 cut(s) 32, 988
Bse1I ACTGG 5 cut(s) 420, 799, 1320, 2057, 2097
Bse21I CCTNAGG 1 cut(s) 1670
Bse3DI GCAATG 2 cut(s) 983, 3181
Bse8I GATNNNNATC 2 cut(s) 2501, 2763
BseAI TCCGGA 3 cut(s) 2667, 2808, 3090
BseBI CCWGG 1 cut(s) 305
BseDI CCNNGG 7 cut(s) 393, 640, 1757, 2707, 2848, 2989, 3756
BseJI GATNNNNATC 2 cut(s) 2501, 2763
BseLI CCNNNNNNNGG 3 cut(s) 2394, 2629, 2770
BseMI GCAATG 2 cut(s) 983, 3181
BseMII CTCAG 7 cut(s) 678, 1661, 2074, 2319, 2734, 3594, 3629
BseNI ACTGG 5 cut(s) 420, 799, 1320, 2057, 2097
BseRI GAGGAG 3 cut(s) 1649, 1916, 3269
BseSI GKGCMC 1 cut(s) 3381
BseXI GCAGC 7 cut(s) 16, 151, 428, 473, 476, 3724, 3826
BseYI CCCAGC 1 cut(s) 1844
BsgI GTGCAG 6 cut(s) 480, 2572, 2713, 2854, 2995, 3136
Bsh1236I CGCG 3 cut(s) 105, 791, 2687
BshFI GGCC 9 cut(s) 203, 620, 639, 1557, 1953, 2065, 3511, 3768, 3778
BshNI GGYRCC 1 cut(s) 2397
BsiHKAI GWGCWC 1 cut(s) 2862
BsiHKCI CYCGRG 1 cut(s) 1175
BsiSI CCGG 8 cut(s) 33, 989, 2668, 2809, 3091, 3233, 3251, 3296
BslFI GGGAC 5 cut(s) 441, 2000, 3411, 3600, 3717
BslI CCNNNNNNNGG 3 cut(s) 2394, 2629, 2770
BsmBI CGTCTC 4 cut(s) 359, 2075, 2667, 2808
BsmFI GGGAC 5 cut(s) 441, 2000, 3411, 3600, 3717
BsmI GAATGC 1 cut(s) 774
BsnI GGCC 9 cut(s) 203, 620, 639, 1557, 1953, 2065, 3511, 3768, 3778
Bso31I GGTCTC 1 cut(s) 290
BsoBI CYCGRG 1 cut(s) 1175
Bsp1286I GDGCHC 5 cut(s) 2580, 2721, 2862, 3144, 3381
Bsp13I TCCGGA 3 cut(s) 2667, 2808, 3090
Bsp1720I GCTNAGC 1 cut(s) 2720
BspACI CCGC 6 cut(s) 27, 103, 193, 481, 2235, 2975
BspANI GGCC 9 cut(s) 203, 620, 639, 1557, 1953, 2065, 3511, 3768, 3778
BspCNI CTCAG 7 cut(s) 677, 1662, 2073, 2320, 2733, 3595, 3630
BspEI TCCGGA 3 cut(s) 2667, 2808, 3090
BspFNI CGCG 3 cut(s) 105, 791, 2687
BspHI TCATGA 2 cut(s) 169, 1249
BspLI GGNNCC 7 cut(s) 101, 1186, 2106, 2399, 3143, 3426, 3427
BspMI ACCTGC 1 cut(s) 2277
BspPI GGATC 5 cut(s) 555, 1106, 1204, 2510, 2969
BspT107I GGYRCC 1 cut(s) 2397
BspTI CTTAAG 4 cut(s) 1603, 2032, 2288, 3161
BspTNI GGTCTC 1 cut(s) 290
BsrDI GCAATG 2 cut(s) 983, 3181
BsrFI RCCGGY 2 cut(s) 32, 988
BsrI ACTGG 5 cut(s) 420, 799, 1320, 2057, 2097
BssAI RCCGGY 2 cut(s) 32, 988
BssECI CCNNGG 7 cut(s) 393, 640, 1757, 2707, 2848, 2989, 3756
BssNI GRCGYC 1 cut(s) 3447
BssT1I CCWWGG 6 cut(s) 393, 640, 2707, 2848, 2989, 3756
Bst2UI CCWGG 1 cut(s) 305
Bst4CI ACNGT 3 cut(s) 1028, 1758, 3313
Bst6I CTCTTC 8 cut(s) 102, 209, 2454, 2601, 2687, 2742, 2883, 3024
BstACI GRCGYC 1 cut(s) 3447
BstAFI CTTAAG 4 cut(s) 1603, 2032, 2288, 3161
BstBAI YACGTR 2 cut(s) 368, 1598
BstDSI CCRYGG 1 cut(s) 1757
BstEII GGTNACC 1 cut(s) 2264
BstFNI CGCG 3 cut(s) 105, 791, 2687
BstMWI GCNNNNNNNGC 5 cut(s) 239, 330, 797, 1463, 2006
BstNI CCWGG 1 cut(s) 305
BstNSI RCATGY 6 cut(s) 1478, 1982, 2618, 2659, 2800, 2941
BstPAI GACNNNNGTC 1 cut(s) 2491
BstPI GGTNACC 1 cut(s) 2264
BstSCI CCNGG 2 cut(s) 303, 3231
BstSFI CTRYAG 2 cut(s) 2402, 3312
BstSLI GKGCMC 1 cut(s) 3381
BstUI CGCG 3 cut(s) 105, 791, 2687
BstV1I GCAGC 7 cut(s) 16, 151, 428, 473, 476, 3724, 3826
BstV2I GAAGAC 2 cut(s) 2198, 3416
BstX2I RGATCY 4 cut(s) 1681, 2282, 2961, 3799
BstYI RGATCY 4 cut(s) 1681, 2282, 2961, 3799
Bsu36I CCTNAGG 1 cut(s) 1670
BsuI GTATCC 2 cut(s) 1423, 3208
BsuRI GGCC 9 cut(s) 203, 620, 639, 1557, 1953, 2065, 3511, 3768, 3778
BtgI CCRYGG 1 cut(s) 1757
BtgZI GCGATG 1 cut(s) 2500
BtsIMutI CAGTG 1 cut(s) 427
BveI ACCTGC 1 cut(s) 2277
CaiI CAGNNNCTG 1 cut(s) 2727
CciI TCATGA 2 cut(s) 169, 1249
Cfr10I RCCGGY 2 cut(s) 32, 988
Cfr13I GGNCC 6 cut(s) 201, 1556, 1910, 3425, 3767, 3777
CseI GACGC 3 cut(s) 797, 3421, 3455
Csp6I GTAC 5 cut(s) 8, 703, 872, 2090, 3309
CviQI GTAC 5 cut(s) 8, 703, 872, 2090, 3309
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 8 cut(s) 102, 209, 2454, 2601, 2687, 2742, 2883, 3024
EarI CTCTTC 8 cut(s) 102, 209, 2454, 2601, 2687, 2742, 2883, 3024
Eco130I CCWWGG 6 cut(s) 393, 640, 2707, 2848, 2989, 3756
Eco147I AGGCCT 1 cut(s) 639
Eco24I GRGCYC 3 cut(s) 2580, 2721, 3144
Eco31I GGTCTC 1 cut(s) 290
Eco32I GATATC 2 cut(s) 88, 2421
Eco47I GGWCC 2 cut(s) 1910, 3425
Eco57I CTGAAG 8 cut(s) 198, 1644, 1682, 2448, 2582, 2723, 2864, 3005
Eco81I CCTNAGG 1 cut(s) 1670
Eco88I CYCGRG 1 cut(s) 1175
Eco91I GGTNACC 1 cut(s) 2264
EcoO109I RGGNCCY 2 cut(s) 1910, 3425
EcoO65I GGTNACC 1 cut(s) 2264
EcoRI GAATTC 1 cut(s) 512
EcoRII CCWGG 1 cut(s) 303
EcoRV GATATC 2 cut(s) 88, 2421
EcoT14I CCWWGG 6 cut(s) 393, 640, 2707, 2848, 2989, 3756
EcoT38I GRGCYC 3 cut(s) 2580, 2721, 3144
ErhI CCWWGG 6 cut(s) 393, 640, 2707, 2848, 2989, 3756
Esp3I CGTCTC 4 cut(s) 359, 2075, 2667, 2808
FalI AAGNNNNNCTT 8 cut(s) 217, 249, 1597, 1629, 1867, 1899, 1997, 2029
FaqI GGGAC 5 cut(s) 441, 2000, 3411, 3600, 3717
FauI CCCGC 3 cut(s) 186, 474, 2968
FauNDI CATATG 2 cut(s) 781, 3214
FbaI TGATCA 3 cut(s) 70, 1252, 1797
Fnu4HI GCNGC 8 cut(s) 30, 165, 417, 462, 465, 2236, 3713, 3840
FriOI GRGCYC 3 cut(s) 2580, 2721, 3144
Fsp4HI GCNGC 8 cut(s) 30, 165, 417, 462, 465, 2236, 3713, 3840
GluI GCNGC 8 cut(s) 30, 165, 417, 462, 465, 2236, 3713, 3840
GsaI CCCAGC 1 cut(s) 1848
GsuI CTGGAG 4 cut(s) 816, 821, 1337, 2933
HaeIII GGCC 9 cut(s) 203, 620, 639, 1557, 1953, 2065, 3511, 3768, 3778
HapII CCGG 8 cut(s) 33, 989, 2668, 2809, 3091, 3233, 3251, 3296
HgaI GACGC 3 cut(s) 797, 3421, 3455
Hin1I GRCGYC 1 cut(s) 3447
HincII GTYRAC 1 cut(s) 3099
HindII GTYRAC 1 cut(s) 3099
HindIII AAGCTT 2 cut(s) 1583, 2125
HpaII CCGG 8 cut(s) 33, 989, 2668, 2809, 3091, 3233, 3251, 3296
Hpy166II GTNNAC 2 cut(s) 1595, 3099
Hpy8I GTNNAC 2 cut(s) 1595, 3099
Hpy99I CGWCG 1 cut(s) 791
HpyAV CCTTC 9 cut(s) 537, 680, 852, 1254, 1999, 2240, 2423, 3439, 3460
HpyCH4III ACNGT 3 cut(s) 1028, 1758, 3313
HpyCH4IV ACGT 4 cut(s) 367, 882, 1597, 2317
HpyF10VI GCNNNNNNNGC 5 cut(s) 239, 330, 797, 1463, 2006
HpySE526I ACGT 4 cut(s) 367, 882, 1597, 2317
Hsp92I GRCGYC 1 cut(s) 3447
KflI GGGWCCC 1 cut(s) 3425
Kpn2I TCCGGA 3 cut(s) 2667, 2808, 3090
KroI GCCGGC 2 cut(s) 32, 988
KroNI GCCGGC 2 cut(s) 34, 990
Ksp22I TGATCA 3 cut(s) 70, 1252, 1797
LmnI GCTCC 5 cut(s) 797, 1172, 2324, 3147, 3420
Lsp1109I GCAGC 7 cut(s) 16, 151, 428, 473, 476, 3724, 3826
MaeII ACGT 4 cut(s) 367, 882, 1597, 2317
MfeI CAATTG 3 cut(s) 74, 1943, 2545
MflI RGATCY 4 cut(s) 1681, 2282, 2961, 3799
MhlI GDGCHC 5 cut(s) 2580, 2721, 2862, 3144, 3381
MlsI TGGCCA 1 cut(s) 620
MluNI TGGCCA 1 cut(s) 620
MlyI GAGTC 8 cut(s) 75, 423, 2185, 2206, 2259, 2501, 3230, 3641
MmeI TCCRAC 6 cut(s) 520, 612, 1237, 1409, 2586, 2727
Mox20I TGGCCA 1 cut(s) 620
MroI TCCGGA 3 cut(s) 2667, 2808, 3090
MroNI GCCGGC 2 cut(s) 32, 988
MroXI GAANNNNTTC 4 cut(s) 603, 2009, 2681, 3321
MscI TGGCCA 1 cut(s) 620
MslI CAYNNNNRTG 2 cut(s) 1398, 2034
Msp20I TGGCCA 1 cut(s) 620
MspA1I CMGCKG 2 cut(s) 29, 2426
MspCI CTTAAG 4 cut(s) 1603, 2032, 2288, 3161
MspI CCGG 8 cut(s) 33, 989, 2668, 2809, 3091, 3233, 3251, 3296
MspR9I CCNGG 2 cut(s) 305, 3233
MunI CAATTG 3 cut(s) 74, 1943, 2545
Mva1269I GAATGC 1 cut(s) 774
MvaI CCWGG 1 cut(s) 305
MvnI CGCG 3 cut(s) 105, 791, 2687
MwoI GCNNNNNNNGC 5 cut(s) 239, 330, 797, 1463, 2006
NaeI GCCGGC 2 cut(s) 34, 990
NciI CCSGG 1 cut(s) 3233
NdeI CATATG 2 cut(s) 781, 3214
NgoMIV GCCGGC 2 cut(s) 32, 988
NlaIV GGNNCC 7 cut(s) 101, 1186, 2106, 2399, 3143, 3426, 3427
NmeAIII GCCGAG 2 cut(s) 300, 411
NmuCI GTSAC 6 cut(s) 52, 967, 2027, 2055, 2264, 3338
NspI RCATGY 6 cut(s) 1478, 1982, 2618, 2659, 2800, 2941
OliI CACNNNNGTG 1 cut(s) 2034
PaeI GCATGC 3 cut(s) 2659, 2800, 2941
PaeR7I CTCGAG 1 cut(s) 1175
PagI TCATGA 2 cut(s) 169, 1249
PaqCI CACCTGC 1 cut(s) 2277
PceI AGGCCT 1 cut(s) 639
PciI ACATGT 3 cut(s) 1474, 1978, 2614
PctI GAATGC 1 cut(s) 774
PdiI GCCGGC 2 cut(s) 34, 990
PdmI GAANNNNTTC 4 cut(s) 603, 2009, 2681, 3321
PflMI CCANNNNNTGG 2 cut(s) 2394, 2770
PkrI GCNGC 8 cut(s) 31, 166, 418, 463, 466, 2237, 3714, 3841
PleI GAGTC 8 cut(s) 75, 423, 2184, 2205, 2258, 2500, 3230, 3640
PpsI GAGTC 8 cut(s) 75, 423, 2184, 2205, 2258, 2500, 3230, 3640
Ppu21I YACGTR 2 cut(s) 368, 1598
PpuMI RGGWCCY 2 cut(s) 1910, 3425
PscI ACATGT 3 cut(s) 1474, 1978, 2614
PshAI GACNNNNGTC 1 cut(s) 2491
PsiI TTATAA 3 cut(s) 224, 237, 290
Psp5II RGGWCCY 2 cut(s) 1910, 3425
Psp6I CCWGG 1 cut(s) 303
PspEI GGTNACC 1 cut(s) 2264
PspFI CCCAGC 1 cut(s) 1844
PspGI CCWGG 1 cut(s) 303
PspN4I GGNNCC 7 cut(s) 101, 1186, 2106, 2399, 3143, 3426, 3427
PspPI GGNCC 6 cut(s) 201, 1556, 1910, 3425, 3767, 3777
PspPPI RGGWCCY 2 cut(s) 1910, 3425
PstNI CAGNNNCTG 1 cut(s) 2727
PsuI RGATCY 4 cut(s) 1681, 2282, 2961, 3799
PvuII CAGCTG 1 cut(s) 2426
RsaI GTAC 5 cut(s) 9, 704, 873, 2091, 3310
RsaNI GTAC 5 cut(s) 8, 703, 872, 2090, 3309
RseI CAYNNNNRTG 2 cut(s) 1398, 2034
SatI GCNGC 8 cut(s) 30, 165, 417, 462, 465, 2236, 3713, 3840
Sau96I GGNCC 6 cut(s) 201, 1556, 1910, 3425, 3767, 3777
SchI GAGTC 8 cut(s) 75, 423, 2185, 2206, 2259, 2501, 3230, 3641
ScrFI CCNGG 2 cut(s) 305, 3233
SduI GDGCHC 5 cut(s) 2580, 2721, 2862, 3144, 3381
SfcI CTRYAG 2 cut(s) 2402, 3312
Sfr274I CTCGAG 1 cut(s) 1175
SinI GGWCC 2 cut(s) 1910, 3425
SlaI CTCGAG 1 cut(s) 1175
SmiMI CAYNNNNRTG 2 cut(s) 1398, 2034
SphI GCATGC 3 cut(s) 2659, 2800, 2941
SseBI AGGCCT 1 cut(s) 639
SsiI CCGC 6 cut(s) 27, 103, 193, 481, 2235, 2975
SspI AATATT 2 cut(s) 604, 1963
StuI AGGCCT 1 cut(s) 639
StyD4I CCNGG 2 cut(s) 303, 3231
StyI CCWWGG 6 cut(s) 393, 640, 2707, 2848, 2989, 3756
TaaI ACNGT 3 cut(s) 1028, 1758, 3313
TaiI ACGT 4 cut(s) 370, 885, 1600, 2320
TaqII GACCGA 1 cut(s) 2252
TatI WGTACW 3 cut(s) 7, 871, 2089
TauI GCSGC 1 cut(s) 2238
TscAI CASTG 1 cut(s) 427
TseFI GTSAC 6 cut(s) 52, 967, 2027, 2055, 2264, 3338
TseI GCWGC 7 cut(s) 29, 164, 416, 461, 464, 3712, 3839
Tsp45I GTSAC 6 cut(s) 52, 967, 2027, 2055, 2264, 3338
TspGWI ACGGA 7 cut(s) 1405, 1498, 2004, 2099, 2151, 2516, 3326
TspRI CASTG 1 cut(s) 427
Van91I CCANNNNNTGG 2 cut(s) 2394, 2770
Vha464I CTTAAG 4 cut(s) 1603, 2032, 2288, 3161
VpaK11BI GGWCC 2 cut(s) 1910, 3425
XapI RAATTY 8 cut(s) 512, 940, 1792, 1835, 2185, 2206, 3261, 3537
XbaI TCTAGA 2 cut(s) 1678, 1972
XceI RCATGY 6 cut(s) 1478, 1982, 2618, 2659, 2800, 2941
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XhoI CTCGAG 1 cut(s) 1175
XmaJI CCTAGG 4 cut(s) 640, 2707, 2848, 2989
XmnI GAANNNNTTC 4 cut(s) 603, 2009, 2681, 3321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.