RchiOBHm_Chr4g0417021

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
42216343 .. 42219746
3404 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38711

Sequence Viewer

Length: 2163 bp
ATGGAAACACTTCCTAGGTGCGATCTAGAGACTCTATCGGATTATGAATGTTGGTCCATAATAAAGGATAGAGCATTTGCAGATCCTAATGCTCCGATTCCTTCAGATCTAGAGGGAATCGGAAGGGACATTACCAAAAAGTGTGCTGGTCTTCCATTGGCGGCAAAGGTTTTGGGAAGCTTGATGCGTTCTAAGAACGGTAGCAATGAATGGTTGTTAATTCTGCAAAGTAAAATATGGCAGGTATCATCAGACAAAGAGGATAGCAGGATCATGTCGGTTCTGGGGTTGAGTTTTGACAATTTGGAATCACCATTGAAACAATGTTTTGCATATTGCTCCATGCTCGAGAGAGGTTCCTCAATTGAAAGATATAACTTGATCCAACTATGGATGGCTCAAGGTTTTCTCCATCCTTCCCATGGTCACCAAACCGAGCAAGAGATTGAAATGGAGGATATAGGCAATAAGTATTTTGGGACTCTACTAGAGAACTCCTTGTTTCAAGATGTTACGGAGGATGAGGATGACTATGGTGTTATCATCACCCGATGCAAGATGCATGATCTTGTGCATGATCTTGCAAACGAAGTATCCAAGTGTGAGAGCTGGACATCAGACTTCAATCATGACATGGAAGATCATGCGATTCGACAAGTTGCACGGGTTCCTACTGCAATACTAGAAAAGATGCCAAAATCAAGTATATCAAGACTGCGCTCATTCTTTTCAAATATCGGGGAGGTCTCTAATACCATTTTTCCAAAATTTAGAGCTTTACGTGTCTTAAGTTTTTGTGAGACTGAGAATCAGGAGTTGCCATATTCACTTAGCAAGCTGAAGCACTTGAGATATCTAGATCTCTCTGATGCAAAAATCAAAGCACTCCCAGAGTCTATTGGCAAGCTCTATAACCTCCAAACATTGAGATTACCTTGGAATCTTAAAAAGTGTCCGAAGAGAGGTCCTGCAATTAAGGAGTTGGGTGGGTTGAACCAATTGAGAGGCCACTTGATTATTATTGGGCTAGAACATGTGAGGGATGGAGAAGAAGCAAAGAAGGCTGGCTTGGTGCACAAGAGTCACTTAAGTCGGTTAACATTTGCATGGACAGACAATGAGGTACCTAATGAAAACCAGATGGAGGTACTAGATGGCTTGGAACCTCATGGTAACTTGCAAAGCTTGAACATTTACCATTTCATGGGTGCTAGATTTCCGTCATGGATATCAGCTGAAGGAGGAGAGGTCGTGAAGGTATTTCCTTGCCTCAAACAGTTGATGATAGATGGTTGTCCCAGCCTAGAGTCGATTCGGATCACACAGGGCATGCCGTCTCTCCGGAAATTGAATATTGAAAGTTGTGACAAATTGTCAAGCCTAGGAAGTGGGCTCAACTACTGCACCTCTCTTCAGGAATTGAAGATAAAGGATTGTTACAATCTAACATCAATTCCAATCACACAGGGCATCACATCTCTCCGAGAATTGAAGATTGATAGTTGTTGGAGTTTATTAAGCCTACCGAGTGGGCTCCAATTCTGCACCTCTCTTGAGGATCTGTATATAACTGATTGCTCTAGTCTACTATCCTTGTCAGTATCTATCCTTGAGGAGGAGGAAATTTCTCATGGTGTTGATGCGTATTTGTCTGTATCGGAGGAGCATTACCGTACTATAGAATCTATTCTTGGTCGGTCGTTGAAATTAAAATATGTGCGCACAATAGGATTTCACCACCTCACTCATTTGAAGACGCTCCGAATTGGTGCGTTTTGGGAGGAGCTGGACGCCTTCCCTCATTTTCATCTTCCTCCTAATTCACAACTTGTTGAGTTATGCTTGTTTGGGTGGCCTAAGCTCGAGTCTCTGCCCCAACAAATTCAGCACTTGACTTGTTTAAAAGAACTCTGGATAAGTGATTTTAAGGGACTAGAGGCTCTTCCTGAGTGGTTGGGAAATCTTACATCTCTTGAGTCTCTAAGAATCTGGTTCTGTGAGAATCTCAAGTATCTGCCTACACAAAATGCTATGAAAGGCCTAACCAAATTAAACAAGCTCCGCAGTGACGGATGTCCCCTGCTCAAAGAAAGATGCACCAAGGAGACTAGCCCAGAATGGCCCAAGATTTGTCACATCCCAGATCTTCAGTGTCTGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

720

Amino Acids

81.79

Weight (kDa)

5.83

Isoelectric Point (pI)

50.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 118 - 195 3.4e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 239 - 319 1.4e-13 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 325 - 455 3.5e-30 R13L1/DRL21 LRRs
LRR_14 PF23598 620 - 689 4.8e-07 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 629 - 685 1.4e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1721
Acc36I ACCTGC 1 cut(s) 232
Acc65I GGTACC 1 cut(s) 1123
AccB1I GGYRCC 1 cut(s) 1123
AccB7I CCANNNNNTGG 1 cut(s) 1204
AccI GTMKAC 1 cut(s) 1585
AccIII TCCGGA 1 cut(s) 1341
AciI CCGC 2 cut(s) 161, 2062
AclWI GGATC 5 cut(s) 77, 278, 376, 1325, 1566
AcsI RAATTY 3 cut(s) 767, 1623, 1881
AcuI CTGAAG 5 cut(s) 87, 860, 1257, 1397, 2132
AcyI GRCGYC 1 cut(s) 1791
AfaI GTAC 3 cut(s) 1125, 1149, 1675
AfiI CCNNNNNNNGG 5 cut(s) 422, 962, 1144, 1204, 1615
AflII CTTAAG 2 cut(s) 787, 1087
AflIII ACRYGT 2 cut(s) 781, 1033
AhdI GACNNNNNGTC 1 cut(s) 1372
AjuI GAANNNNNNNTTGG 4 cut(s) 1052, 1084, 1674, 1706
Alw21I GWGCWC 1 cut(s) 1077
Alw26I GTCTC 7 cut(s) 23, 751, 794, 1341, 1872, 1983, 2099
Alw44I GTGCAC 1 cut(s) 1073
AlwI GGATC 5 cut(s) 77, 278, 376, 1325, 1566
AlwNI CAGNNNCTG 1 cut(s) 2155
Ama87I CYCGRG 2 cut(s) 347, 1862
Aor13HI TCCGGA 1 cut(s) 1341
AoxI GGCC 4 cut(s) 1006, 1853, 2038, 2120
ApaLI GTGCAC 1 cut(s) 1073
ApoI RAATTY 3 cut(s) 767, 1623, 1881
Asp700I GAANNNNTTC 2 cut(s) 9, 1686
Asp718I GGTACC 1 cut(s) 1123
AspA2I CCTAGG 2 cut(s) 14, 1381
AspLEI GCGC 2 cut(s) 720, 1722
AspS9I GGNCC 3 cut(s) 54, 965, 2121
AsuHPI GGTGA 4 cut(s) 303, 419, 538, 1727
AvaI CYCGRG 2 cut(s) 347, 1862
AvaII GGWCC 2 cut(s) 54, 965
AvrII CCTAGG 2 cut(s) 14, 1381
BaeGI GKGCMC 1 cut(s) 1077
BanI GGYRCC 1 cut(s) 1123
BanII GRGCYC 2 cut(s) 1395, 1536
BarI GAAGNNNNNNTAC 2 cut(s) 115, 147
BbsI GAAGAC 2 cut(s) 143, 1760
Bbv12I GWGCWC 1 cut(s) 1077
BccI CCATC 6 cut(s) 388, 420, 1037, 1135, 1148, 1283
BceAI ACGGC 1 cut(s) 1318
BciVI GTATCC 1 cut(s) 604
BcoDI GTCTC 7 cut(s) 23, 751, 794, 1341, 1872, 1983, 2099
BfmI CTRYAG 1 cut(s) 1677
BfrI CTTAAG 2 cut(s) 787, 1087
BfuAI ACCTGC 1 cut(s) 232
BfuI GTATCC 1 cut(s) 604
BglII AGATCT 3 cut(s) 106, 859, 2143
BisI GCNGC 1 cut(s) 162
BlnI CCTAGG 2 cut(s) 14, 1381
BlsI GCNGC 1 cut(s) 163
Bme18I GGWCC 2 cut(s) 54, 965
BmeRI GACNNNNNGTC 1 cut(s) 1372
BmeT110I CYCGRG 2 cut(s) 347, 1862
BmgT120I GGNCC 3 cut(s) 54, 965, 2121
BmiI GGNNCC 5 cut(s) 358, 669, 1125, 1164, 1535
BmsI GCATC 8 cut(s) 174, 542, 549, 681, 859, 1479, 1630, 2084
BoxI GACNNNNGTC 1 cut(s) 2073
BpiI GAAGAC 2 cut(s) 143, 1760
Bpu10I CCTNAGC 1 cut(s) 1857
BpuEI CTTGAG 6 cut(s) 384, 868, 1574, 1631, 1991, 1994
BsaAI YACGTR 1 cut(s) 782
BsaBI GATNNNNATC 1 cut(s) 1316
BsaHI GRCGYC 1 cut(s) 1791
BsaI GGTCTC 1 cut(s) 751
BsaJI CCNNGG 5 cut(s) 14, 421, 935, 1381, 2100
BsaWI WCCGGW 1 cut(s) 1341
BsaXI ACNNNNNCTCC 4 cut(s) 1233, 1236, 1263, 1266
Bsc4I CCNNNNNNNGG 5 cut(s) 422, 962, 1144, 1204, 1615
Bse3DI GCAATG 1 cut(s) 211
Bse8I GATNNNNATC 1 cut(s) 1316
BseAI TCCGGA 1 cut(s) 1341
BseDI CCNNGG 5 cut(s) 14, 421, 935, 1381, 2100
BseGI GGATG 7 cut(s) 399, 412, 526, 532, 1048, 2078, 2136
BseJI GATNNNNATC 1 cut(s) 1316
BseLI CCNNNNNNNGG 5 cut(s) 422, 962, 1144, 1204, 1615
BseMI GCAATG 1 cut(s) 211
BseMII CTCAG 2 cut(s) 795, 1938
BseRI GAGGAG 5 cut(s) 1257, 1628, 1631, 1676, 1796
BseSI GKGCMC 1 cut(s) 1077
BseYI CCCAGC 1 cut(s) 1298
BsgI GTGCAG 2 cut(s) 1387, 1528
Bsh1285I CGRYCG 1 cut(s) 1700
BshFI GGCC 4 cut(s) 1008, 1855, 2040, 2122
BshNI GGYRCC 1 cut(s) 1123
BsiEI CGRYCG 1 cut(s) 1700
BsiHKAI GWGCWC 1 cut(s) 1077
BsiHKCI CYCGRG 2 cut(s) 347, 1862
BsiSI CCGG 1 cut(s) 1342
BslFI GGGAC 5 cut(s) 140, 493, 1281, 1944, 2061
BslI CCNNNNNNNGG 5 cut(s) 422, 962, 1144, 1204, 1615
BsmAI GTCTC 7 cut(s) 23, 751, 794, 1341, 1872, 1983, 2099
BsmBI CGTCTC 1 cut(s) 1341
BsmFI GGGAC 5 cut(s) 140, 493, 1281, 1944, 2061
BsnI GGCC 4 cut(s) 1008, 1855, 2040, 2122
Bso31I GGTCTC 1 cut(s) 751
BsoBI CYCGRG 2 cut(s) 347, 1862
Bsp1286I GDGCHC 3 cut(s) 1077, 1395, 1536
Bsp13I TCCGGA 1 cut(s) 1341
Bsp19I CCATGG 1 cut(s) 421
BspACI CCGC 2 cut(s) 161, 2062
BspANI GGCC 4 cut(s) 1008, 1855, 2040, 2122
BspCNI CTCAG 2 cut(s) 796, 1939
BspEI TCCGGA 1 cut(s) 1341
BspHI TCATGA 1 cut(s) 628
BspLI GGNNCC 5 cut(s) 358, 669, 1125, 1164, 1535
BspMI ACCTGC 1 cut(s) 232
BspPI GGATC 5 cut(s) 77, 278, 376, 1325, 1566
BspQI GCTCTTC 1 cut(s) 1947
BspT107I GGYRCC 1 cut(s) 1123
BspTI CTTAAG 2 cut(s) 787, 1087
BspTNI GGTCTC 1 cut(s) 751
BsrDI GCAATG 1 cut(s) 211
BssECI CCNNGG 5 cut(s) 14, 421, 935, 1381, 2100
BssNI GRCGYC 1 cut(s) 1791
BssT1I CCWWGG 5 cut(s) 14, 421, 935, 1381, 2100
Bst4CI ACNGT 3 cut(s) 200, 1278, 1673
Bst6I CTCTTC 3 cut(s) 953, 1416, 1947
BstACI GRCGYC 1 cut(s) 1791
BstAFI CTTAAG 2 cut(s) 787, 1087
BstBAI YACGTR 1 cut(s) 782
BstC8I GCNNGC 4 cut(s) 836, 905, 1066, 1331
BstDEI CTNAG 6 cut(s) 192, 804, 830, 1857, 1947, 1982
BstDSI CCRYGG 1 cut(s) 421
BstEII GGTNACC 1 cut(s) 425
BstENI CCTNNNNNAGG 1 cut(s) 1613
BstF5I GGATG 7 cut(s) 399, 412, 526, 532, 1048, 2078, 2136
BstHHI GCGC 2 cut(s) 720, 1722
BstMAI GTCTC 7 cut(s) 23, 751, 794, 1341, 1872, 1983, 2099
BstMCI CGRYCG 1 cut(s) 1700
BstMWI GCNNNNNNNGC 1 cut(s) 1061
BstNSI RCATGY 2 cut(s) 1037, 1333
BstPAI GACNNNNGTC 1 cut(s) 2073
BstPI GGTNACC 1 cut(s) 425
BstSFI CTRYAG 1 cut(s) 1677
BstSLI GKGCMC 1 cut(s) 1077
BstV2I GAAGAC 2 cut(s) 143, 1760
BstX2I RGATCY 5 cut(s) 82, 106, 859, 1558, 2143
BstYI RGATCY 5 cut(s) 82, 106, 859, 1558, 2143
BsuI GTATCC 1 cut(s) 604
BsuRI GGCC 4 cut(s) 1008, 1855, 2040, 2122
BtgI CCRYGG 1 cut(s) 421
BtsCI GGATG 7 cut(s) 399, 412, 526, 532, 1048, 2078, 2136
BtsI GCAGTG 1 cut(s) 2071
BtsIMutI CAGTG 2 cut(s) 2071, 2156
BveI ACCTGC 1 cut(s) 232
Cac8I GCNNGC 4 cut(s) 836, 905, 1066, 1331
CaiI CAGNNNCTG 1 cut(s) 2155
CciI TCATGA 1 cut(s) 628
CfoI GCGC 2 cut(s) 720, 1722
Cfr13I GGNCC 3 cut(s) 54, 965, 2121
CseI GACGC 2 cut(s) 1765, 1799
Csp6I GTAC 3 cut(s) 1124, 1148, 1674
CviQI GTAC 3 cut(s) 1124, 1148, 1674
DdeI CTNAG 6 cut(s) 192, 804, 830, 1857, 1947, 1982
DraI TTTAAA 1 cut(s) 1902
DriI GACNNNNNGTC 1 cut(s) 1372
Eam1104I CTCTTC 3 cut(s) 953, 1416, 1947
Eam1105I GACNNNNNGTC 1 cut(s) 1372
EarI CTCTTC 3 cut(s) 953, 1416, 1947
Eco130I CCWWGG 5 cut(s) 14, 421, 935, 1381, 2100
Eco147I AGGCCT 1 cut(s) 2040
Eco24I GRGCYC 2 cut(s) 1395, 1536
Eco31I GGTCTC 1 cut(s) 751
Eco32I GATATC 2 cut(s) 854, 1230
Eco47I GGWCC 2 cut(s) 54, 965
Eco57I CTGAAG 5 cut(s) 87, 860, 1257, 1397, 2132
Eco88I CYCGRG 2 cut(s) 347, 1862
Eco91I GGTNACC 1 cut(s) 425
EcoNI CCTNNNNNAGG 1 cut(s) 1613
EcoO109I RGGNCCY 1 cut(s) 965
EcoO65I GGTNACC 1 cut(s) 425
EcoRV GATATC 2 cut(s) 854, 1230
EcoT14I CCWWGG 5 cut(s) 14, 421, 935, 1381, 2100
EcoT22I ATGCAT 1 cut(s) 564
EcoT38I GRGCYC 2 cut(s) 1395, 1536
ErhI CCWWGG 5 cut(s) 14, 421, 935, 1381, 2100
Esp3I CGTCTC 1 cut(s) 1341
FalI AAGNNNNNCTT 4 cut(s) 1052, 1084, 1070, 1102
FaqI GGGAC 5 cut(s) 140, 493, 1281, 1944, 2061
FblI GTMKAC 1 cut(s) 1585
Fnu4HI GCNGC 1 cut(s) 162
FokI GGATG 7 cut(s) 399, 406, 533, 539, 1055, 2085, 2123
FriOI GRGCYC 2 cut(s) 1395, 1536
Fsp4HI GCNGC 1 cut(s) 162
FspAI RTGCGCAY 1 cut(s) 1721
FspI TGCGCA 1 cut(s) 1721
GlaI GCGC 2 cut(s) 719, 1721
GluI GCNGC 1 cut(s) 162
GsaI CCCAGC 1 cut(s) 1302
HaeIII GGCC 4 cut(s) 1008, 1855, 2040, 2122
HapII CCGG 1 cut(s) 1342
HgaI GACGC 2 cut(s) 1765, 1799
HhaI GCGC 2 cut(s) 720, 1722
Hin1I GRCGYC 1 cut(s) 1791
Hin6I GCGC 2 cut(s) 718, 1720
HinP1I GCGC 2 cut(s) 718, 1720
HincII GTYRAC 1 cut(s) 1098
HindII GTYRAC 1 cut(s) 1098
HindIII AAGCTT 2 cut(s) 178, 1183
HpaI GTTAAC 1 cut(s) 1098
HpaII CCGG 1 cut(s) 1342
HphI GGTGA 4 cut(s) 303, 419, 538, 1727
Hpy166II GTNNAC 3 cut(s) 1075, 1098, 1586
Hpy8I GTNNAC 3 cut(s) 1075, 1098, 1586
HpyAV CCTTC 7 cut(s) 111, 117, 426, 1054, 1232, 1249, 1804
HpyCH4III ACNGT 3 cut(s) 200, 1278, 1673
HpyCH4IV ACGT 1 cut(s) 781
HpyF10VI GCNNNNNNNGC 1 cut(s) 1061
HpyF3I CTNAG 6 cut(s) 192, 804, 830, 1857, 1947, 1982
HpySE526I ACGT 1 cut(s) 781
Hsp92I GRCGYC 1 cut(s) 1791
HspAI GCGC 2 cut(s) 718, 1720
Kpn2I TCCGGA 1 cut(s) 1341
KpnI GGTACC 1 cut(s) 1127
KspAI GTTAAC 1 cut(s) 1098
LguI GCTCTTC 1 cut(s) 1947
LmnI GCTCC 7 cut(s) 97, 344, 1539, 1663, 1764, 1783, 2064
LweI GCATC 8 cut(s) 174, 542, 549, 681, 859, 1479, 1630, 2084
MaeII ACGT 1 cut(s) 781
MaeIII GTNAC 8 cut(s) 425, 511, 1082, 1172, 1364, 1436, 2066, 2132
MfeI CAATTG 2 cut(s) 363, 998
MflI RGATCY 5 cut(s) 82, 106, 859, 1558, 2143
MhlI GDGCHC 3 cut(s) 1077, 1395, 1536
MlyI GAGTC 7 cut(s) 25, 475, 902, 1090, 1316, 1874, 1985
MmeI TCCRAC 2 cut(s) 409, 1487
Mph1103I ATGCAT 1 cut(s) 564
MroI TCCGGA 1 cut(s) 1341
MroXI GAANNNNTTC 2 cut(s) 9, 1686
MslI CAYNNNNRTG 1 cut(s) 1105
MspA1I CMGCKG 1 cut(s) 1235
MspCI CTTAAG 2 cut(s) 787, 1087
MspI CCGG 1 cut(s) 1342
MunI CAATTG 2 cut(s) 363, 998
MwoI GCNNNNNNNGC 1 cut(s) 1061
NcoI CCATGG 1 cut(s) 421
NlaIV GGNNCC 5 cut(s) 358, 669, 1125, 1164, 1535
NmuCI GTSAC 5 cut(s) 425, 1082, 1364, 2066, 2132
NsbI TGCGCA 1 cut(s) 1721
NsiI ATGCAT 1 cut(s) 564
NspI RCATGY 2 cut(s) 1037, 1333
PaeI GCATGC 1 cut(s) 1333
PaeR7I CTCGAG 2 cut(s) 347, 1862
PagI TCATGA 1 cut(s) 628
PceI AGGCCT 1 cut(s) 2040
PciI ACATGT 1 cut(s) 1033
PciSI GCTCTTC 1 cut(s) 1947
PdmI GAANNNNTTC 2 cut(s) 9, 1686
PflMI CCANNNNNTGG 1 cut(s) 1204
PkrI GCNGC 1 cut(s) 163
PleI GAGTC 7 cut(s) 25, 475, 901, 1089, 1315, 1873, 1984
PpsI GAGTC 7 cut(s) 25, 475, 901, 1089, 1315, 1873, 1984
Ppu21I YACGTR 1 cut(s) 782
PpuMI RGGWCCY 1 cut(s) 965
PscI ACATGT 1 cut(s) 1033
PshAI GACNNNNGTC 1 cut(s) 2073
Psp5II RGGWCCY 1 cut(s) 965
PspEI GGTNACC 1 cut(s) 425
PspFI CCCAGC 1 cut(s) 1298
PspN4I GGNNCC 5 cut(s) 358, 669, 1125, 1164, 1535
PspPI GGNCC 3 cut(s) 54, 965, 2121
PspPPI RGGWCCY 1 cut(s) 965
PspXI VCTCGAGB 1 cut(s) 1862
PstNI CAGNNNCTG 1 cut(s) 2155
PsuI RGATCY 5 cut(s) 82, 106, 859, 1558, 2143
PvuII CAGCTG 1 cut(s) 1235
RsaI GTAC 3 cut(s) 1125, 1149, 1675
RsaNI GTAC 3 cut(s) 1124, 1148, 1674
RseI CAYNNNNRTG 1 cut(s) 1105
SapI GCTCTTC 1 cut(s) 1947
SatI GCNGC 1 cut(s) 162
Sau96I GGNCC 3 cut(s) 54, 965, 2121
SchI GAGTC 7 cut(s) 25, 475, 902, 1090, 1316, 1874, 1985
SduI GDGCHC 3 cut(s) 1077, 1395, 1536
SfaNI GCATC 8 cut(s) 174, 542, 549, 681, 859, 1479, 1630, 2084
SfcI CTRYAG 1 cut(s) 1677
Sfr274I CTCGAG 2 cut(s) 347, 1862
SinI GGWCC 2 cut(s) 54, 965
SlaI CTCGAG 2 cut(s) 347, 1862
SmiMI CAYNNNNRTG 1 cut(s) 1105
SphI GCATGC 1 cut(s) 1333
SseBI AGGCCT 1 cut(s) 2040
SsiI CCGC 2 cut(s) 161, 2062
SspI AATATT 1 cut(s) 1354
StuI AGGCCT 1 cut(s) 2040
StyI CCWWGG 5 cut(s) 14, 421, 935, 1381, 2100
TaaI ACNGT 3 cut(s) 200, 1278, 1673
TaiI ACGT 1 cut(s) 784
TaqI TCGA 4 cut(s) 348, 652, 1310, 1863
TaqII GACCGA 1 cut(s) 1686
TauI GCSGC 1 cut(s) 164
TscAI CASTG 2 cut(s) 2071, 2156
TseFI GTSAC 5 cut(s) 425, 1082, 1364, 2066, 2132
Tsp45I GTSAC 5 cut(s) 425, 1082, 1364, 2066, 2132
TspDTI ATGAA 6 cut(s) 60, 222, 1146, 1192, 1796, 2048
TspGWI ACGGA 3 cut(s) 530, 1209, 2085
TspRI CASTG 2 cut(s) 2071, 2156
Van91I CCANNNNNTGG 1 cut(s) 1204
Vha464I CTTAAG 2 cut(s) 787, 1087
VneI GTGCAC 1 cut(s) 1073
VpaK11BI GGWCC 2 cut(s) 54, 965
XagI CCTNNNNNAGG 1 cut(s) 1613
XapI RAATTY 3 cut(s) 767, 1623, 1881
XbaI TCTAGA 3 cut(s) 25, 109, 856
XceI RCATGY 2 cut(s) 1037, 1333
XcmI CCANNNNNNNNNTGG 1 cut(s) 419
XhoI CTCGAG 2 cut(s) 347, 1862
XmaJI CCTAGG 2 cut(s) 14, 1381
XmiI GTMKAC 1 cut(s) 1585
XmnI GAANNNNTTC 2 cut(s) 9, 1686
Zsp2I ATGCAT 1 cut(s) 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.