disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 15 - 103 | 1.7e-16 | Rx N-terminal domain |
| nSTAND6 | PF25201 | 176 - 278 | 2.8e-06 | Novel STAND NTPase 6 |
| NB-ARC | PF00931 | 180 - 354 | 1.2e-35 | NB-ARC domain |
| AAA_22 | PF13401 | 201 - 291 | 1.2e-06 | AAA domain |
| WHD_DRP | PF23559 | 494 - 563 | 1.3e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 610 - 854 | 1.4e-27 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 726 - 852 | 2.6e-32 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1628, 2595 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 792, 2791 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 705, 2845 |
| AccBSI | CCGCTC | 1 cut(s) | 2906 |
| AciI | CCGC | 4 cut(s) | 407, 1245, 1294, 2904 |
| AclI | AACGTT | 1 cut(s) | 2859 |
| AclWI | GGATC | 2 cut(s) | 195, 417 |
| AcoI | YGGCCR | 2 cut(s) | 1246, 1295 |
| AcsI | RAATTY | 9 cut(s) | 83, 457, 702, 1012, 1728, 2050, 2269, 2420, 2458 |
| AcuI | CTGAAG | 1 cut(s) | 1404 |
| AdeI | CACNNNGTG | 1 cut(s) | 1814 |
| AfaI | GTAC | 6 cut(s) | 324, 855, 1137, 1271, 2355, 2416 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 44, 705, 2513, 2845 |
| AflII | CTTAAG | 1 cut(s) | 2392 |
| AflIII | ACRYGT | 4 cut(s) | 1215, 1855, 2068, 2536 |
| AhlI | ACTAGT | 1 cut(s) | 1693 |
| AjnI | CCWGG | 2 cut(s) | 2818, 2934 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1934, 1966 |
| Alw21I | GWGCWC | 2 cut(s) | 1075, 1960 |
| Alw26I | GTCTC | 8 cut(s) | 201, 505, 742, 1758, 2059, 2128, 2369, 2630 |
| AlwI | GGATC | 2 cut(s) | 195, 417 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 210 |
| Ama87I | CYCGRG | 1 cut(s) | 1252 |
| AoxI | GGCC | 3 cut(s) | 1204, 1246, 1295 |
| ApeKI | GCWGC | 3 cut(s) | 74, 1082, 3070 |
| ApoI | RAATTY | 9 cut(s) | 83, 457, 702, 1012, 1728, 2050, 2269, 2420, 2458 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 239, 271, 674, 706, 2411, 2443 |
| AseI | ATTAAT | 1 cut(s) | 267 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 457, 990, 1056, 2097 |
| AspA2I | CCTAGG | 1 cut(s) | 1964 |
| AspS9I | GGNCC | 2 cut(s) | 1035, 1204 |
| AsuC2I | CCSGG | 2 cut(s) | 98, 1824 |
| AsuHPI | GGTGA | 6 cut(s) | 622, 1021, 1061, 1431, 2662, 3024 |
| AsuII | TTCGAA | 2 cut(s) | 21, 2026 |
| AvaI | CYCGRG | 1 cut(s) | 1252 |
| AvaII | GGWCC | 1 cut(s) | 1035 |
| AvrII | CCTAGG | 1 cut(s) | 1964 |
| BanII | GRGCYC | 1 cut(s) | 633 |
| BauI | CACGAG | 3 cut(s) | 237, 2169, 2789 |
| BbsI | GAAGAC | 1 cut(s) | 247 |
| Bbv12I | GWGCWC | 2 cut(s) | 1075, 1960 |
| BbvI | GCAGC | 3 cut(s) | 61, 1094, 3057 |
| BccI | CCATC | 7 cut(s) | 826, 1519, 1558, 1628, 1634, 1703, 2839 |
| BceAI | ACGGC | 2 cut(s) | 1179, 3083 |
| BciT130I | CCWGG | 2 cut(s) | 2820, 2936 |
| BclI | TGATCA | 1 cut(s) | 511 |
| BcnI | CCSGG | 2 cut(s) | 98, 1824 |
| BcoDI | GTCTC | 8 cut(s) | 201, 505, 742, 1758, 2059, 2128, 2369, 2630 |
| BcuI | ACTAGT | 1 cut(s) | 1693 |
| BfmI | CTRYAG | 2 cut(s) | 1991, 2129 |
| BfrI | CTTAAG | 1 cut(s) | 2392 |
| BglII | AGATCT | 1 cut(s) | 525 |
| BisI | GCNGC | 5 cut(s) | 75, 1083, 1246, 1295, 3071 |
| BlnI | CCTAGG | 1 cut(s) | 1964 |
| BlsI | GCNGC | 5 cut(s) | 76, 1084, 1247, 1296, 3072 |
| Bme1390I | CCNGG | 4 cut(s) | 98, 1824, 2820, 2936 |
| Bme18I | GGWCC | 1 cut(s) | 1035 |
| BmeT110I | CYCGRG | 1 cut(s) | 1252 |
| BmgT120I | GGNCC | 2 cut(s) | 1035, 1204 |
| BmiI | GGNNCC | 1 cut(s) | 2578 |
| BmrFI | CCNGG | 4 cut(s) | 98, 1824, 2820, 2936 |
| BmrI | ACTGGG | 1 cut(s) | 1890 |
| BmsI | GCATC | 7 cut(s) | 434, 983, 1164, 1308, 1646, 1653, 2721 |
| BmuI | ACTGGG | 1 cut(s) | 1890 |
| BpiI | GAAGAC | 1 cut(s) | 247 |
| BpmI | CTGGAG | 4 cut(s) | 304, 2802, 2918, 3069 |
| Bpu14I | TTCGAA | 2 cut(s) | 21, 2026 |
| BpuEI | CTTGAG | 6 cut(s) | 63, 398, 487, 1515, 2083, 2795 |
| BpuMI | CCSGG | 2 cut(s) | 98, 1824 |
| BsaAI | YACGTR | 2 cut(s) | 140, 1856 |
| BsaI | GGTCTC | 1 cut(s) | 2369 |
| BsaJI | CCNNGG | 5 cut(s) | 97, 995, 1822, 1964, 2036 |
| BsaWI | WCCGGW | 1 cut(s) | 2695 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 533, 563, 3042, 3072 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 44, 705, 2513, 2845 |
| Bse1I | ACTGG | 6 cut(s) | 215, 787, 1896, 2361, 2954, 3052 |
| Bse3DI | GCAATG | 1 cut(s) | 803 |
| BseBI | CCWGG | 2 cut(s) | 2820, 2936 |
| BseDI | CCNNGG | 5 cut(s) | 97, 995, 1822, 1964, 2036 |
| BseGI | GGATG | 8 cut(s) | 1073, 1179, 1530, 1639, 2439, 2854, 3011, 3075 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 44, 705, 2513, 2845 |
| BseMI | GCAATG | 1 cut(s) | 803 |
| BseMII | CTCAG | 2 cut(s) | 1776, 1913 |
| BseNI | ACTGG | 6 cut(s) | 215, 787, 1896, 2361, 2954, 3052 |
| BseRI | GAGGAG | 3 cut(s) | 554, 2659, 3066 |
| BseXI | GCAGC | 3 cut(s) | 61, 1094, 3057 |
| BseYI | CCCAGC | 1 cut(s) | 1177 |
| BsgI | GTGCAG | 2 cut(s) | 2357, 3056 |
| BshFI | GGCC | 3 cut(s) | 1206, 1248, 1297 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1075, 1960 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1252 |
| BsiSI | CCGG | 3 cut(s) | 97, 1824, 2696 |
| BslFI | GGGAC | 3 cut(s) | 2258, 2489, 3022 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 44, 705, 2513, 2845 |
| BsmAI | GTCTC | 8 cut(s) | 201, 505, 742, 1758, 2059, 2128, 2369, 2630 |
| BsmBI | CGTCTC | 3 cut(s) | 505, 742, 1758 |
| BsmFI | GGGAC | 3 cut(s) | 2258, 2489, 3022 |
| BsnI | GGCC | 3 cut(s) | 1206, 1248, 1297 |
| Bso31I | GGTCTC | 1 cut(s) | 2369 |
| BsoBI | CYCGRG | 1 cut(s) | 1252 |
| Bsp119I | TTCGAA | 2 cut(s) | 21, 2026 |
| Bsp1286I | GDGCHC | 3 cut(s) | 633, 1075, 1960 |
| Bsp143I | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| BspACI | CCGC | 4 cut(s) | 407, 1245, 1294, 2904 |
| BspANI | GGCC | 3 cut(s) | 1206, 1248, 1297 |
| BspCNI | CTCAG | 2 cut(s) | 1777, 1914 |
| BspHI | TCATGA | 3 cut(s) | 514, 942, 1093 |
| BspLI | GGNNCC | 1 cut(s) | 2578 |
| BspMAI | CTGCAG | 1 cut(s) | 2133 |
| BspPI | GGATC | 2 cut(s) | 195, 417 |
| BspT104I | TTCGAA | 2 cut(s) | 21, 2026 |
| BspTI | CTTAAG | 1 cut(s) | 2392 |
| BspTNI | GGTCTC | 1 cut(s) | 2369 |
| BsrBI | CCGCTC | 1 cut(s) | 2906 |
| BsrDI | GCAATG | 1 cut(s) | 803 |
| BsrI | ACTGG | 6 cut(s) | 215, 787, 1896, 2361, 2954, 3052 |
| BssECI | CCNNGG | 5 cut(s) | 97, 995, 1822, 1964, 2036 |
| BssMI | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| BssSI | CACGAG | 3 cut(s) | 237, 2169, 2789 |
| BssT1I | CCWWGG | 2 cut(s) | 1964, 2036 |
| Bst2BI | CACGAG | 3 cut(s) | 237, 2169, 2789 |
| Bst2UI | CCWGG | 2 cut(s) | 2820, 2936 |
| Bst4CI | ACNGT | 9 cut(s) | 499, 674, 1193, 1430, 1814, 2552, 2641, 3030, 3036 |
| Bst6I | CTCTTC | 2 cut(s) | 222, 833 |
| BstAFI | CTTAAG | 1 cut(s) | 2392 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2726 |
| BstBAI | YACGTR | 2 cut(s) | 140, 1856 |
| BstBI | TTCGAA | 2 cut(s) | 21, 2026 |
| BstDEI | CTNAG | 8 cut(s) | 157, 439, 1785, 1913, 1922, 2222, 2531, 2918 |
| BstEII | GGTNACC | 1 cut(s) | 3030 |
| BstF5I | GGATG | 8 cut(s) | 1073, 1179, 1530, 1639, 2439, 2854, 3011, 3075 |
| BstKTI | GATC | 7 cut(s) | 190, 412, 514, 528, 1325, 1672, 1684 |
| BstMAI | GTCTC | 8 cut(s) | 201, 505, 742, 1758, 2059, 2128, 2369, 2630 |
| BstMBI | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 14, 71, 242, 404, 1079, 2726 |
| BstNI | CCWGG | 2 cut(s) | 2820, 2936 |
| BstNSI | RCATGY | 3 cut(s) | 1219, 2072, 2540 |
| BstPI | GGTNACC | 1 cut(s) | 3030 |
| BstSCI | CCNGG | 4 cut(s) | 96, 1822, 2818, 2934 |
| BstSFI | CTRYAG | 2 cut(s) | 1991, 2129 |
| BstV1I | GCAGC | 3 cut(s) | 61, 1094, 3057 |
| BstV2I | GAAGAC | 1 cut(s) | 247 |
| BstX2I | RGATCY | 2 cut(s) | 409, 525 |
| BstYI | RGATCY | 2 cut(s) | 409, 525 |
| BsuRI | GGCC | 3 cut(s) | 1206, 1248, 1297 |
| BtgZI | GCGATG | 3 cut(s) | 177, 1653, 2744 |
| BtsCI | GGATG | 8 cut(s) | 1073, 1179, 1530, 1639, 2439, 2854, 3011, 3075 |
| BtsI | GCAGTG | 2 cut(s) | 967, 1173 |
| BtsIMutI | CAGTG | 4 cut(s) | 967, 1173, 1819, 2646 |
| CaiI | CAGNNNCTG | 1 cut(s) | 210 |
| CciI | TCATGA | 3 cut(s) | 514, 942, 1093 |
| Cfr13I | GGNCC | 2 cut(s) | 1035, 1204 |
| CseI | GACGC | 2 cut(s) | 251, 2415 |
| Csp6I | GTAC | 6 cut(s) | 323, 854, 1136, 1270, 2354, 2415 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1287, 1322, 2256, 2291 |
| CviQI | GTAC | 6 cut(s) | 323, 854, 1136, 1270, 2354, 2415 |
| DdeI | CTNAG | 8 cut(s) | 157, 439, 1785, 1913, 1922, 2222, 2531, 2918 |
| DpnI | GATC | 7 cut(s) | 189, 411, 513, 527, 1324, 1671, 1683 |
| DpnII | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| DraI | TTTAAA | 1 cut(s) | 1284 |
| DraIII | CACNNNGTG | 1 cut(s) | 1814 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 792, 2791 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 792, 2791 |
| EaeI | YGGCCR | 2 cut(s) | 1246, 1295 |
| Eam1104I | CTCTTC | 2 cut(s) | 222, 833 |
| EarI | CTCTTC | 2 cut(s) | 222, 833 |
| Eco130I | CCWWGG | 2 cut(s) | 1964, 2036 |
| Eco24I | GRGCYC | 1 cut(s) | 633 |
| Eco31I | GGTCTC | 1 cut(s) | 2369 |
| Eco32I | GATATC | 2 cut(s) | 1749, 1928 |
| Eco47I | GGWCC | 1 cut(s) | 1035 |
| Eco57I | CTGAAG | 1 cut(s) | 1404 |
| Eco88I | CYCGRG | 1 cut(s) | 1252 |
| Eco91I | GGTNACC | 1 cut(s) | 3030 |
| EcoO65I | GGTNACC | 1 cut(s) | 3030 |
| EcoRI | GAATTC | 1 cut(s) | 83 |
| EcoRII | CCWGG | 2 cut(s) | 2818, 2934 |
| EcoRV | GATATC | 2 cut(s) | 1749, 1928 |
| EcoT14I | CCWWGG | 2 cut(s) | 1964, 2036 |
| EcoT22I | ATGCAT | 2 cut(s) | 1668, 2559 |
| EcoT38I | GRGCYC | 1 cut(s) | 633 |
| ErhI | CCWWGG | 2 cut(s) | 1964, 2036 |
| Esp3I | CGTCTC | 3 cut(s) | 505, 742, 1758 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1707, 1739 |
| FaqI | GGGAC | 3 cut(s) | 2258, 2489, 3022 |
| FbaI | TGATCA | 1 cut(s) | 511 |
| Fnu4HI | GCNGC | 5 cut(s) | 75, 1083, 1246, 1295, 3071 |
| FokI | GGATG | 8 cut(s) | 1080, 1186, 1537, 1646, 2446, 2861, 2998, 3062 |
| FriOI | GRGCYC | 1 cut(s) | 633 |
| Fsp4HI | GCNGC | 5 cut(s) | 75, 1083, 1246, 1295, 3071 |
| GluI | GCNGC | 5 cut(s) | 75, 1083, 1246, 1295, 3071 |
| GsaI | CCCAGC | 1 cut(s) | 1181 |
| GsuI | CTGGAG | 4 cut(s) | 304, 2802, 2918, 3069 |
| HaeIII | GGCC | 3 cut(s) | 1206, 1248, 1297 |
| HapII | CCGG | 3 cut(s) | 97, 1824, 2696 |
| HgaI | GACGC | 2 cut(s) | 251, 2415 |
| HincII | GTYRAC | 5 cut(s) | 365, 2301, 2784, 2863, 2897 |
| HindII | GTYRAC | 5 cut(s) | 365, 2301, 2784, 2863, 2897 |
| HindIII | AAGCTT | 4 cut(s) | 505, 1053, 2116, 2561 |
| HinfI | GANTC | 6 cut(s) | 102, 145, 575, 1398, 1818, 2785 |
| HpaII | CCGG | 3 cut(s) | 97, 1824, 2696 |
| HphI | GGTGA | 6 cut(s) | 622, 1021, 1061, 1431, 2662, 3024 |
| Hpy166II | GTNNAC | 9 cut(s) | 365, 1136, 1853, 2301, 2498, 2784, 2863, 2897, 3045 |
| Hpy188I | TCNGA | 6 cut(s) | 107, 206, 635, 996, 1655, 1955 |
| Hpy8I | GTNNAC | 9 cut(s) | 365, 1136, 1853, 2301, 2498, 2784, 2863, 2897, 3045 |
| Hpy99I | CGWCG | 4 cut(s) | 263, 734, 2348, 2626 |
| HpyAV | CCTTC | 4 cut(s) | 1101, 1379, 2151, 2354 |
| HpyCH4III | ACNGT | 9 cut(s) | 499, 674, 1193, 1430, 1814, 2552, 2641, 3030, 3036 |
| HpyCH4IV | ACGT | 5 cut(s) | 139, 732, 1855, 1997, 2859 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 14, 71, 242, 404, 1079, 2726 |
| HpyF3I | CTNAG | 8 cut(s) | 157, 439, 1785, 1913, 1922, 2222, 2531, 2918 |
| HpySE526I | ACGT | 5 cut(s) | 139, 732, 1855, 1997, 2859 |
| Ksp22I | TGATCA | 1 cut(s) | 511 |
| Kzo9I | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| Lsp1109I | GCAGC | 3 cut(s) | 61, 1094, 3057 |
| LweI | GCATC | 7 cut(s) | 434, 983, 1164, 1308, 1646, 1653, 2721 |
| MaeII | ACGT | 5 cut(s) | 139, 732, 1855, 1997, 2859 |
| MaeIII | GTNAC | 7 cut(s) | 166, 239, 674, 949, 1001, 1826, 3030 |
| MalI | GATC | 7 cut(s) | 189, 411, 513, 527, 1324, 1671, 1683 |
| MbiI | CCGCTC | 1 cut(s) | 2906 |
| MboI | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| MfeI | CAATTG | 2 cut(s) | 1902, 2201 |
| MflI | RGATCY | 2 cut(s) | 409, 525 |
| MhlI | GDGCHC | 3 cut(s) | 633, 1075, 1960 |
| MlyI | GAGTC | 2 cut(s) | 569, 2779 |
| MmeI | TCCRAC | 5 cut(s) | 603, 1458, 1581, 2392, 2826 |
| Mph1103I | ATGCAT | 2 cut(s) | 1668, 2559 |
| MroXI | GAANNNNTTC | 4 cut(s) | 457, 990, 1056, 2097 |
| MslI | CAYNNNNRTG | 6 cut(s) | 936, 1066, 1548, 2224, 2308, 2346 |
| MspCI | CTTAAG | 1 cut(s) | 2392 |
| MspI | CCGG | 3 cut(s) | 97, 1824, 2696 |
| MspR9I | CCNGG | 4 cut(s) | 98, 1824, 2820, 2936 |
| MunI | CAATTG | 2 cut(s) | 1902, 2201 |
| MvaI | CCWGG | 2 cut(s) | 2820, 2936 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 14, 71, 242, 404, 1079, 2726 |
| NciI | CCSGG | 2 cut(s) | 98, 1824 |
| NdeII | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| NlaIV | GGNNCC | 1 cut(s) | 2578 |
| NmeAIII | GCCGAG | 1 cut(s) | 2605 |
| NmuCI | GTSAC | 4 cut(s) | 166, 239, 1001, 3030 |
| NsiI | ATGCAT | 2 cut(s) | 1668, 2559 |
| NspI | RCATGY | 3 cut(s) | 1219, 2072, 2540 |
| NspV | TTCGAA | 2 cut(s) | 21, 2026 |
| PagI | TCATGA | 3 cut(s) | 514, 942, 1093 |
| PciI | ACATGT | 3 cut(s) | 1215, 2068, 2536 |
| PdmI | GAANNNNTTC | 4 cut(s) | 457, 990, 1056, 2097 |
| PfeI | GAWTC | 4 cut(s) | 102, 145, 1398, 1818 |
| PflFI | GACNNNGTC | 1 cut(s) | 251 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 705, 2845 |
| PfoI | TCCNGGA | 2 cut(s) | 2818, 2934 |
| PkrI | GCNGC | 5 cut(s) | 76, 1084, 1247, 1296, 3072 |
| PleI | GAGTC | 2 cut(s) | 569, 2779 |
| PpsI | GAGTC | 2 cut(s) | 569, 2779 |
| Ppu21I | YACGTR | 2 cut(s) | 140, 1856 |
| PscI | ACATGT | 3 cut(s) | 1215, 2068, 2536 |
| PshBI | ATTAAT | 1 cut(s) | 267 |
| PsiI | TTATAA | 2 cut(s) | 1628, 2595 |
| Psp1406I | AACGTT | 1 cut(s) | 2859 |
| Psp6I | CCWGG | 2 cut(s) | 2818, 2934 |
| PspEI | GGTNACC | 1 cut(s) | 3030 |
| PspFI | CCCAGC | 1 cut(s) | 1177 |
| PspGI | CCWGG | 2 cut(s) | 2818, 2934 |
| PspN4I | GGNNCC | 1 cut(s) | 2578 |
| PspPI | GGNCC | 2 cut(s) | 1035, 1204 |
| PstI | CTGCAG | 1 cut(s) | 2133 |
| PstNI | CAGNNNCTG | 1 cut(s) | 210 |
| PsuI | RGATCY | 2 cut(s) | 409, 525 |
| PsyI | GACNNNGTC | 1 cut(s) | 251 |
| RsaI | GTAC | 6 cut(s) | 324, 855, 1137, 1271, 2355, 2416 |
| RsaNI | GTAC | 6 cut(s) | 323, 854, 1136, 1270, 2354, 2415 |
| RseI | CAYNNNNRTG | 6 cut(s) | 936, 1066, 1548, 2224, 2308, 2346 |
| SatI | GCNGC | 5 cut(s) | 75, 1083, 1246, 1295, 3071 |
| Sau3AI | GATC | 7 cut(s) | 187, 409, 511, 525, 1322, 1669, 1681 |
| Sau96I | GGNCC | 2 cut(s) | 1035, 1204 |
| SchI | GAGTC | 2 cut(s) | 569, 2779 |
| ScrFI | CCNGG | 4 cut(s) | 98, 1824, 2820, 2936 |
| SduI | GDGCHC | 3 cut(s) | 633, 1075, 1960 |
| SfaNI | GCATC | 7 cut(s) | 434, 983, 1164, 1308, 1646, 1653, 2721 |
| SfcI | CTRYAG | 2 cut(s) | 1991, 2129 |
| SfuI | TTCGAA | 2 cut(s) | 21, 2026 |
| SinI | GGWCC | 1 cut(s) | 1035 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 936, 1066, 1548, 2224, 2308, 2346 |
| SmlI | CTYRAG | 7 cut(s) | 78, 413, 502, 1530, 2062, 2392, 2774 |
| SmoI | CTYRAG | 7 cut(s) | 78, 413, 502, 1530, 2062, 2392, 2774 |
| SpeI | ACTAGT | 1 cut(s) | 1693 |
| SsiI | CCGC | 4 cut(s) | 407, 1245, 1294, 2904 |
| SspI | AATATT | 2 cut(s) | 1586, 2031 |
| StyD4I | CCNGG | 4 cut(s) | 96, 1822, 2818, 2934 |
| StyI | CCWWGG | 2 cut(s) | 1964, 2036 |
| TaaI | ACNGT | 9 cut(s) | 499, 674, 1193, 1430, 1814, 2552, 2641, 3030, 3036 |
| TaiI | ACGT | 5 cut(s) | 142, 735, 1858, 2000, 2862 |
| TaqI | TCGA | 5 cut(s) | 21, 258, 729, 2026, 2079 |
| TaqII | GACCGA | 1 cut(s) | 2504 |
| TatI | WGTACW | 2 cut(s) | 1135, 2353 |
| TauI | GCSGC | 2 cut(s) | 1248, 1297 |
| TfiI | GAWTC | 4 cut(s) | 102, 145, 1398, 1818 |
| TscAI | CASTG | 4 cut(s) | 967, 1173, 1819, 2646 |
| TseFI | GTSAC | 4 cut(s) | 166, 239, 1001, 3030 |
| TseI | GCWGC | 3 cut(s) | 74, 1082, 3070 |
| Tsp45I | GTSAC | 4 cut(s) | 166, 239, 1001, 3030 |
| TspGWI | ACGGA | 2 cut(s) | 766, 1080 |
| TspRI | CASTG | 4 cut(s) | 967, 1173, 1819, 2646 |
| Tth111I | GACNNNGTC | 1 cut(s) | 251 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 705, 2845 |
| Vha464I | CTTAAG | 1 cut(s) | 2392 |
| VpaK11BI | GGWCC | 1 cut(s) | 1035 |
| VspI | ATTAAT | 1 cut(s) | 267 |
| XapI | RAATTY | 9 cut(s) | 83, 457, 702, 1012, 1728, 2050, 2269, 2420, 2458 |
| XbaI | TCTAGA | 3 cut(s) | 1325, 1558, 1930 |
| XceI | RCATGY | 3 cut(s) | 1219, 2072, 2540 |
| XmaJI | CCTAGG | 1 cut(s) | 1964 |
| XmnI | GAANNNNTTC | 4 cut(s) | 457, 990, 1056, 2097 |
| Zsp2I | ATGCAT | 2 cut(s) | 1668, 2559 |