Rmu_ssc0000477.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000477.1
Physical Location & Seq
Forward (+)
10277 .. 15076
4800 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000477.1_g000001.1.cds

Sequence Viewer

Length: 3870 bp
atggcagattttctgctcacttttgctgctgagggaatactgaccaaggtgacttcgctcgctgctcaagaattcagtcttgtattgggtttcaaagaagatctggcacagctgcgtgactcattcctcaagattcaagctatgctaagagatgtcgaccattcacaagttcgaggggaggctgtggaaatgtgggtgaaggatcttgaagacatagctaacgaagccgatgatgtcttggatgaaattgggtatgaagttctccgacgcaaagtagaactccgagaccagatgaagaaaaaggtgaaaaatttcttctcccactccaatcccattgcctttcgcttacaaatggcacataaaatcaagaaaatcaacacatctttggtgaaattattcaatcaggcagctggccctattgggttagttgctaggacattagcagatgcaacctctcaggatattgaagtacttgatagggagaccgtctccacctttgatagtgatgagaagctcataattggaagagaggaggtcgcgtcagagatggtcaaaaccttactcaagtcacactataatgaagaaaatgatctcccagttttggctatcgttggaatgccaggtctaggcaagacaactttggctaaatcaatatataatgaatctaagattgatagccacttccatgaaaaaatatgggtgtgtgtatccaccccttttgatgtcaagacgatcttaagggggatcttggaagctctgaaaccagagaaagcagcagtacaaagcaaggacgcgatttgtaaattcattcgagaagaggtaaaagggaaaagataccttctcatactggatgatgtttggaacgaagattctgaaaaatggaaggagttgaggagttgtttgttaacaattaaagatactcaaggaagtagcatcattgtcactacccgtagtgaccgagttgcaaaagtcatggaaactcttcccagatgtgatttaagaaaactatcagatgatgaatgctggctcataatgaaggataaagccattccagttgggagtcctcctatgtctaaagagcaggagacaattggtagagagatcgctaaaagatgtggaggtgtacctctagtgtcaaaggttttgggagatgtgatgcgatctaaaacaagtgatgaatggcgattaattttaaaaagtaaaacatgggattcaccagaaggagaaaagagaattttttcaattttgaagttgagttttgatgaattgaaacctccatccttgaaacaatgttttgcatattgctcgatattcttcaaagattttgatattgaaaaggatgacttgatccaactttggatggctcagggatggcttcacccttgttctgacaaaagcctagagatggaggagagaggtaatgaatattttaaaatcctattggcgaagtctttttttcaagatgttacaaaggattatagtggtaatgttaccaaatgtaagatgcacgatcttgtgcatgatcttgcagagcatgtatcaaaatcaaggaacttacgctcacttttttcaaatggagaagtccttgggagcaacttacttagcttcaaatctttacgtgtgttaaatttatacaaagcagatattgtggagttgccaatttcaattgggaagttgaaacacttgaggtatttgaatgttttgaaaacaagaatcaaaacatttcccaaatcaattggtcagctttataacttgcaaacattgaaaatatcttatcaacttgaagaatttccaggggaagttgcaaatttgatcaacttgcggcacatttattttggtagatatatgaaagttccaggtgggatattgagacggttgactaatcttcggtcattaccttttctcaaggtgggtaacaagacaggtcctggaattgaggaattgggttgtttaaaccagttacacaacaccttgtctatatatggattggaaaatgtaggagatggagaagaagcttcgaaagcaaacttggtcgagaagaaacatataagcaagttaatccttgattggaagcctagtaggccaagccacaatgtggagaatgacgatgatgtactagaaggcctccgaccacattctagtttggaatttttggagattcagggattcatgggtgttaaacttccatcatggttattgctggcccacaatttgaaagagattgaattattgggctgcaacaaatgtgaaggcgtcccagtacttggccatttacccaatcttagttgtgttaagattatgagaatggagaacctaactcgtataggatctgagttctatggtgatgaccatgttaactgtggaaatggatcaagtaaggaggcgcggcctttgttccctactttgaaaacattgcatattgaggaggcccggaacctgattgaatggatggaagcgccaacagaaagagcaactacagtgtttccatgtctcgaggagctgaccttgatttgctgtaacaaactgacaagtgctcccagtcattttccatctctcaagaagttggtgataaaatggatggatagcggaggcatgccaatagcaagtattctaagcaataaactcaccaccctcacttatctcagcttatcggaagtggggggacttacttgtctgccggaagggatgttagaaaacaacaagaatcttgcaaatttagaaataactcggtgttcagagttgacttgtatttctccccaatcacaaggatttgagtactgctgtgcatctctttcgtatttgcggatatggatttgtcacaatctcagatatttacctgatgggctactcactccttctcttaaaaagatgacgttgtattcttgtcgcaatctagagtacatcccagatgctacacacggtggtctcacatcccttgaaacattgactttgtcaatgtgctataaaataacttccattccattttcacaaggcctgctatctcttgctgaattacatatagaccagtgtccggaattatcaagcctaccgggtggactagtatactgtacctctattcggagtttaacaatagcgatgtgccctaaggtaccctctatttcaatcgaaagtctgagtgcatccctcgaagagttgtgtgtaagtgatctagactctcttccaatttcacgaggaggcttcacatcactccgtgaattgtcaatcttatattgcgagagtgccgaaattgggctagaatttagtgcctgtcttcaaaccctcgtctctcttcaaaaattgacggtgaggttttgcgaaaatctggagactattccaagttcagacaagctcacatccctccgcagcttggagattagagggtgtaataaattaacatgtctaccgaatgggttagcagcatcgtcacagtcctgcagcctcacccgtttgaaggaattgacaattggtgatttatgcgaggagctcgatgaattcccagcttttcaggcgataccacaacttgaatcattaaccatctgggggtggcctaagctcaagtctctccctgaacaaattcaacacttgccttctttaaggcatttggaaataacatggtttcacggagtggaggctattccagagtggttgggaaaccttgcatctcttgaggacctgactattgagtgtttcccgagtctaaagtatctaccttctgtggaagcaatgcaacgcctcaccaaattgaaagagatagacatctcccgctgtccccttctagaagaaagatgcacggaggagagcggcccagagtggccaaagattcgtcatcttccattcatccgatttggggctacaagaatcgagaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1289

Amino Acids

145.18

Weight (kDa)

6.05

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1749
AasI GACNNNNNNGTC 1 cut(s) 2670
Acc65I GGTACC 1 cut(s) 3109
AccB1I GGYRCC 1 cut(s) 3109
AccB7I CCANNNNNTGG 2 cut(s) 2095, 2264
AccBSI CCGCTC 1 cut(s) 3801
AccI GTMKAC 3 cut(s) 156, 3063, 3400
AccII CGCG 3 cut(s) 539, 794, 2386
AccIII TCCGGA 1 cut(s) 3031
AciI CCGC 7 cut(s) 1822, 2386, 2586, 2803, 3361, 3763, 3801
AclWI GGATC 5 cut(s) 210, 752, 1342, 2335, 2377
AcoI YGGCCR 2 cut(s) 2266, 3812
AcyI GRCGYC 1 cut(s) 2253
AdeI CACNNNGTG 4 cut(s) 2095, 2921, 3212, 3625
AfaI GTAC 9 cut(s) 471, 780, 1125, 2115, 2262, 2777, 2900, 3070, 3111
AflII CTTAAG 1 cut(s) 736
AflIII ACRYGT 2 cut(s) 1618, 3395
AhlI ACTAGT 1 cut(s) 3058
AjnI CCWGG 4 cut(s) 619, 1792, 1855, 1927
AjuI GAANNNNNNNTTGG 4 cut(s) 2012, 2044, 3447, 3479
Alw21I GWGCWC 2 cut(s) 2536, 3486
AlwI GGATC 5 cut(s) 210, 752, 1342, 2335, 2377
AlwNI CAGNNNCTG 1 cut(s) 1928
Ama87I CYCGRG 2 cut(s) 2492, 3691
Aor13HI TCCGGA 1 cut(s) 3031
ApeKI GCWGC 9 cut(s) 26, 62, 112, 407, 773, 2235, 3363, 3416, 3435
AseI ATTAAT 1 cut(s) 1187
Asp700I GAANNNNTTC 6 cut(s) 311, 395, 981, 1237, 1788, 3573
Asp718I GGTACC 1 cut(s) 3109
AspLEI GCGC 2 cut(s) 2386, 2458
AspS9I GGNCC 6 cut(s) 413, 1925, 2203, 2428, 3670, 3803
AsuC2I CCSGG 2 cut(s) 2431, 3051
AsuII TTCGAA 1 cut(s) 2018
AvaI CYCGRG 2 cut(s) 2492, 3691
AvaII GGWCC 2 cut(s) 1925, 3670
AxyI CCTNAGG 1 cut(s) 3105
BaeGI GKGCMC 1 cut(s) 3104
BalI TGGCCA 2 cut(s) 2268, 3814
BanI GGYRCC 1 cut(s) 3109
BanII GRGCYC 1 cut(s) 3486
BauI CACGAG 1 cut(s) 3189
BbsI GAAGAC 2 cut(s) 216, 3263
Bbv12I GWGCWC 2 cut(s) 2536, 3486
BbvCI CCTCAGC 1 cut(s) 30
BbvI GCAGC 9 cut(s) 13, 49, 99, 419, 785, 2222, 3375, 3428, 3447
BcgI CGANNNNNNTGC 4 cut(s) 1287, 1321, 2775, 2809
BciT130I CCWGG 4 cut(s) 621, 1794, 1857, 1929
BciVI GTATCC 1 cut(s) 718
BclI TGATCA 1 cut(s) 1812
BcnI CCSGG 2 cut(s) 2431, 3051
BcuI ACTAGT 1 cut(s) 3058
BfmI CTRYAG 2 cut(s) 2475, 3433
BfoI RGCGCY 1 cut(s) 2459
BfrI CTTAAG 1 cut(s) 736
BfuI GTATCC 1 cut(s) 718
BglI GCCNNNNNGGC 1 cut(s) 2080
BglII AGATCT 1 cut(s) 100
BmcAI AGTACT 3 cut(s) 471, 2262, 2777
Bme1390I CCNGG 6 cut(s) 621, 1794, 1857, 1929, 2431, 3051
Bme18I GGWCC 2 cut(s) 1925, 3670
BmeT110I CYCGRG 2 cut(s) 2492, 3691
BmgT120I GGNCC 6 cut(s) 413, 1925, 2203, 2428, 3670, 3803
BmiI GGNNCC 2 cut(s) 2435, 3111
BmrFI CCNGG 6 cut(s) 621, 1794, 1857, 1929, 2431, 3051
BmrI ACTGGG 3 cut(s) 590, 2252, 2532
BmuI ACTGGG 3 cut(s) 590, 2252, 2532
BoxI GACNNNNGTC 1 cut(s) 3027
BpiI GAAGAC 2 cut(s) 216, 3263
BplI GAGNNNNNCTC 2 cut(s) 473, 505
BpmI CTGGAG 1 cut(s) 3344
Bpu10I CCTNAGC 3 cut(s) 30, 1365, 3549
Bpu14I TTCGAA 1 cut(s) 2018
BpuEI CTTGAG 9 cut(s) 51, 113, 548, 906, 1705, 1889, 2540, 3539, 3686
BpuMI CCSGG 2 cut(s) 2431, 3051
BsaAI YACGTR 1 cut(s) 1619
BsaBI GATNNNNATC 1 cut(s) 3755
BsaHI GRCGYC 1 cut(s) 2253
BsaI GGTCTC 3 cut(s) 279, 476, 2930
BsaJI CCNNGG 3 cut(s) 45, 1585, 1793
BsaWI WCCGGW 1 cut(s) 3031
BsaXI ACNNNNNCTCC 4 cut(s) 524, 554, 2518, 2548
Bse1I ACTGG 7 cut(s) 596, 852, 1052, 1957, 2258, 2538, 3025
Bse21I CCTNAGG 1 cut(s) 3105
Bse3DI GCAATG 3 cut(s) 333, 2411, 3729
Bse8I GATNNNNATC 1 cut(s) 3755
BseAI TCCGGA 1 cut(s) 3031
BseBI CCWGG 4 cut(s) 621, 1794, 1857, 1929
BseDI CCNNGG 3 cut(s) 45, 1585, 1793
BseJI GATNNNNATC 1 cut(s) 3755
BseMI GCAATG 3 cut(s) 333, 2411, 3729
BseMII CTCAG 7 cut(s) 21, 470, 1379, 2322, 2656, 2839, 3125
BseNI ACTGG 7 cut(s) 596, 852, 1052, 1957, 2258, 2538, 3025
BseRI GAGGAG 8 cut(s) 545, 907, 1424, 2438, 2510, 3207, 3494, 3809
BseSI GKGCMC 1 cut(s) 3104
BseXI GCAGC 9 cut(s) 13, 49, 99, 419, 785, 2222, 3375, 3428, 3447
BseYI CCCAGC 1 cut(s) 3496
Bsh1236I CGCG 3 cut(s) 539, 794, 2386
BshNI GGYRCC 1 cut(s) 3109
BsiHKAI GWGCWC 2 cut(s) 2536, 3486
BsiHKCI CYCGRG 2 cut(s) 2492, 3691
BsiSI CCGG 4 cut(s) 2431, 2678, 3032, 3050
BslFI GGGAC 3 cut(s) 2240, 2676, 3753
BsmBI CGTCTC 3 cut(s) 493, 1864, 3289
BsmFI GGGAC 3 cut(s) 2240, 2676, 3753
BsmI GAATGC 2 cut(s) 621, 1025
Bso31I GGTCTC 3 cut(s) 279, 476, 2930
BsoBI CYCGRG 2 cut(s) 2492, 3691
Bsp119I TTCGAA 1 cut(s) 2018
Bsp1286I GDGCHC 3 cut(s) 2536, 3104, 3486
Bsp13I TCCGGA 1 cut(s) 3031
BspACI CCGC 7 cut(s) 1822, 2386, 2586, 2803, 3361, 3763, 3801
BspCNI CTCAG 7 cut(s) 22, 469, 1378, 2323, 2655, 2838, 3126
BspEI TCCGGA 1 cut(s) 3031
BspFNI CGCG 3 cut(s) 539, 794, 2386
BspLI GGNNCC 2 cut(s) 2435, 3111
BspMAI CTGCAG 1 cut(s) 3437
BspPI GGATC 5 cut(s) 210, 752, 1342, 2335, 2377
BspT104I TTCGAA 1 cut(s) 2018
BspT107I GGYRCC 1 cut(s) 3109
BspTI CTTAAG 1 cut(s) 736
BspTNI GGTCTC 3 cut(s) 279, 476, 2930
BsrBI CCGCTC 1 cut(s) 3801
BsrDI GCAATG 3 cut(s) 333, 2411, 3729
BsrI ACTGG 7 cut(s) 596, 852, 1052, 1957, 2258, 2538, 3025
BssECI CCNNGG 3 cut(s) 45, 1585, 1793
BssNAI GTATAC 1 cut(s) 3064
BssNI GRCGYC 1 cut(s) 2253
BssSI CACGAG 1 cut(s) 3189
BssT1I CCWWGG 2 cut(s) 45, 1585
Bst1107I GTATAC 1 cut(s) 3064
Bst2BI CACGAG 1 cut(s) 3189
Bst2UI CCWGG 4 cut(s) 621, 1794, 1857, 1929
Bst4CI ACNGT 8 cut(s) 487, 1875, 2360, 2479, 2921, 3068, 3304, 3429
Bst6I CTCTTC 6 cut(s) 520, 810, 987, 3144, 3183, 3294
BstACI GRCGYC 1 cut(s) 2253
BstAFI CTTAAG 1 cut(s) 736
BstBAI YACGTR 1 cut(s) 1619
BstBI TTCGAA 1 cut(s) 2018
BstC8I GCNNGC 6 cut(s) 60, 412, 1025, 2202, 2594, 2996
BstFNI CGCG 3 cut(s) 539, 794, 2386
BstH2I RGCGCY 1 cut(s) 2459
BstHHI GCGC 2 cut(s) 2386, 2458
BstMWI GCNNNNNNNGC 4 cut(s) 224, 2021, 2080, 3506
BstNI CCWGG 4 cut(s) 621, 1794, 1857, 1929
BstNSI RCATGY 3 cut(s) 1538, 2596, 3399
BstPAI GACNNNNGTC 1 cut(s) 3027
BstSCI CCNGG 6 cut(s) 619, 1792, 1855, 1927, 2429, 3049
BstSFI CTRYAG 2 cut(s) 2475, 3433
BstSLI GKGCMC 1 cut(s) 3104
BstUI CGCG 3 cut(s) 539, 794, 2386
BstV1I GCAGC 9 cut(s) 13, 49, 99, 419, 785, 2222, 3375, 3428, 3447
BstV2I GAAGAC 2 cut(s) 216, 3263
BstX2I RGATCY 4 cut(s) 100, 202, 744, 2327
BstYI RGATCY 4 cut(s) 100, 202, 744, 2327
BstZ17I GTATAC 1 cut(s) 3064
Bsu36I CCTNAGG 1 cut(s) 3105
BsuI GTATCC 1 cut(s) 718
BtgZI GCGATG 1 cut(s) 3110
BtsIMutI CAGTG 2 cut(s) 2484, 3032
Cac8I GCNNGC 6 cut(s) 60, 412, 1025, 2202, 2594, 2996
CaiI CAGNNNCTG 1 cut(s) 1928
CfoI GCGC 2 cut(s) 2386, 2458
Cfr13I GGNCC 6 cut(s) 413, 1925, 2203, 2428, 3670, 3803
CseI GACGC 4 cut(s) 276, 528, 800, 2242
Csp6I GTAC 9 cut(s) 470, 779, 1124, 2114, 2261, 2776, 2899, 3069, 3110
CspCI CAANNNNNGTGG 2 cut(s) 700, 735
CviQI GTAC 9 cut(s) 470, 779, 1124, 2114, 2261, 2776, 2899, 3069, 3110
DraI TTTAAA 3 cut(s) 1194, 1432, 1953
DraIII CACNNNGTG 4 cut(s) 2095, 2921, 3212, 3625
DrdI GACNNNNNNGTC 1 cut(s) 2670
DseDI GACNNNNNNGTC 1 cut(s) 2670
EaeI YGGCCR 2 cut(s) 2266, 3812
Eam1104I CTCTTC 6 cut(s) 520, 810, 987, 3144, 3183, 3294
EarI CTCTTC 6 cut(s) 520, 810, 987, 3144, 3183, 3294
Ecl136II GAGCTC 1 cut(s) 3484
Eco130I CCWWGG 2 cut(s) 45, 1585
Eco147I AGGCCT 2 cut(s) 2124, 2994
Eco24I GRGCYC 1 cut(s) 3486
Eco31I GGTCTC 3 cut(s) 279, 476, 2930
Eco47I GGWCC 2 cut(s) 1925, 3670
Eco53kI GAGCTC 1 cut(s) 3484
Eco81I CCTNAGG 1 cut(s) 3105
Eco88I CYCGRG 2 cut(s) 2492, 3691
EcoICRI GAGCTC 1 cut(s) 3484
EcoO109I RGGNCCY 2 cut(s) 1925, 3670
EcoRI GAATTC 2 cut(s) 71, 3491
EcoRII CCWGG 4 cut(s) 619, 1792, 1855, 1927
EcoT14I CCWWGG 2 cut(s) 45, 1585
EcoT38I GRGCYC 1 cut(s) 3486
ErhI CCWWGG 2 cut(s) 45, 1585
Esp3I CGTCTC 3 cut(s) 493, 1864, 3289
FalI AAGNNNNNCTT 4 cut(s) 719, 751, 1328, 1360
FaqI GGGAC 3 cut(s) 2240, 2676, 3753
FauI CCCGC 1 cut(s) 3770
FbaI TGATCA 1 cut(s) 1812
FblI GTMKAC 3 cut(s) 156, 3063, 3400
FriOI GRGCYC 1 cut(s) 3486
GlaI GCGC 2 cut(s) 2385, 2457
GsaI CCCAGC 1 cut(s) 3500
GsuI CTGGAG 1 cut(s) 3344
HaeII RGCGCY 1 cut(s) 2459
HapII CCGG 4 cut(s) 2431, 2678, 3032, 3050
HgaI GACGC 4 cut(s) 276, 528, 800, 2242
HhaI GCGC 2 cut(s) 2386, 2458
Hin1I GRCGYC 1 cut(s) 2253
Hin6I GCGC 2 cut(s) 2384, 2456
HinP1I GCGC 2 cut(s) 2384, 2456
HincII GTYRAC 5 cut(s) 157, 906, 1878, 2356, 2742
HindII GTYRAC 5 cut(s) 157, 906, 1878, 2356, 2742
HindIII AAGCTT 1 cut(s) 2013
HpaI GTTAAC 2 cut(s) 906, 2356
HpaII CCGG 4 cut(s) 2431, 2678, 3032, 3050
Hpy166II GTNNAC 9 cut(s) 157, 906, 1124, 1878, 2356, 2742, 3056, 3064, 3401
Hpy8I GTNNAC 9 cut(s) 157, 906, 1124, 1878, 2356, 2742, 3056, 3064, 3401
Hpy99I CGWCG 1 cut(s) 270
HpyCH4III ACNGT 8 cut(s) 487, 1875, 2360, 2479, 2921, 3068, 3304, 3429
HpyCH4IV ACGT 2 cut(s) 1618, 2873
HpyF10VI GCNNNNNNNGC 4 cut(s) 224, 2021, 2080, 3506
HpySE526I ACGT 2 cut(s) 1618, 2873
Hsp92I GRCGYC 1 cut(s) 2253
HspAI GCGC 2 cut(s) 2384, 2456
Kpn2I TCCGGA 1 cut(s) 3031
KpnI GGTACC 1 cut(s) 3113
Ksp22I TGATCA 1 cut(s) 1812
KspAI GTTAAC 2 cut(s) 906, 2356
LmnI GCTCC 4 cut(s) 1590, 2497, 2539, 3481
Lsp1109I GCAGC 9 cut(s) 13, 49, 99, 419, 785, 2222, 3375, 3428, 3447
MaeII ACGT 2 cut(s) 1618, 2873
MbiI CCGCTC 1 cut(s) 3801
MfeI CAATTG 4 cut(s) 1089, 1665, 1734, 3462
MflI RGATCY 4 cut(s) 100, 202, 744, 2327
MhlI GDGCHC 3 cut(s) 2536, 3104, 3486
MlsI TGGCCA 2 cut(s) 2268, 3814
MluNI TGGCCA 2 cut(s) 2268, 3814
MlyI GAGTC 4 cut(s) 113, 1069, 3167, 3703
MmeI TCCRAC 4 cut(s) 289, 592, 1375, 2152
Mox20I TGGCCA 2 cut(s) 2268, 3814
MroI TCCGGA 1 cut(s) 3031
MroXI GAANNNNTTC 6 cut(s) 311, 395, 981, 1237, 1788, 3573
MscI TGGCCA 2 cut(s) 2268, 3814
MslI CAYNNNNRTG 2 cut(s) 576, 684
Msp20I TGGCCA 2 cut(s) 2268, 3814
MspA1I CMGCKG 3 cut(s) 112, 410, 3765
MspCI CTTAAG 1 cut(s) 736
MspI CCGG 4 cut(s) 2431, 2678, 3032, 3050
MspR9I CCNGG 6 cut(s) 621, 1794, 1857, 1929, 2431, 3051
MssI GTTTAAAC 1 cut(s) 1953
MunI CAATTG 4 cut(s) 1089, 1665, 1734, 3462
Mva1269I GAATGC 2 cut(s) 621, 1025
MvaI CCWGG 4 cut(s) 621, 1794, 1857, 1929
MvnI CGCG 3 cut(s) 539, 794, 2386
MwoI GCNNNNNNNGC 4 cut(s) 224, 2021, 2080, 3506
NciI CCSGG 2 cut(s) 2431, 3051
NlaIV GGNNCC 2 cut(s) 2435, 3111
NmuCI GTSAC 7 cut(s) 49, 116, 567, 940, 953, 2816, 3423
NspI RCATGY 3 cut(s) 1538, 2596, 3399
NspV TTCGAA 1 cut(s) 2018
PaeI GCATGC 1 cut(s) 2596
PaeR7I CTCGAG 1 cut(s) 2492
PceI AGGCCT 2 cut(s) 2124, 2994
PciI ACATGT 1 cut(s) 3395
PctI GAATGC 2 cut(s) 621, 1025
PdmI GAANNNNTTC 6 cut(s) 311, 395, 981, 1237, 1788, 3573
PflFI GACNNNGTC 1 cut(s) 2950
PflMI CCANNNNNTGG 2 cut(s) 2095, 2264
PfoI TCCNGGA 1 cut(s) 1927
PleI GAGTC 4 cut(s) 113, 1068, 3167, 3702
PmeI GTTTAAAC 1 cut(s) 1953
PpsI GAGTC 4 cut(s) 113, 1068, 3167, 3702
Ppu21I YACGTR 1 cut(s) 1619
PpuMI RGGWCCY 2 cut(s) 1925, 3670
PscI ACATGT 1 cut(s) 3395
PshAI GACNNNNGTC 1 cut(s) 3027
PshBI ATTAAT 1 cut(s) 1187
PsiI TTATAA 1 cut(s) 1749
Psp124BI GAGCTC 1 cut(s) 3486
Psp5II RGGWCCY 2 cut(s) 1925, 3670
Psp6I CCWGG 4 cut(s) 619, 1792, 1855, 1927
PspFI CCCAGC 1 cut(s) 3496
PspGI CCWGG 4 cut(s) 619, 1792, 1855, 1927
PspN4I GGNNCC 2 cut(s) 2435, 3111
PspPI GGNCC 6 cut(s) 413, 1925, 2203, 2428, 3670, 3803
PspPPI RGGWCCY 2 cut(s) 1925, 3670
PstI CTGCAG 1 cut(s) 3437
PstNI CAGNNNCTG 1 cut(s) 1928
PsuI RGATCY 4 cut(s) 100, 202, 744, 2327
PsyI GACNNNGTC 1 cut(s) 2950
PvuII CAGCTG 2 cut(s) 112, 410
RsaI GTAC 9 cut(s) 471, 780, 1125, 2115, 2262, 2777, 2900, 3070, 3111
RsaNI GTAC 9 cut(s) 470, 779, 1124, 2114, 2261, 2776, 2899, 3069, 3110
RseI CAYNNNNRTG 2 cut(s) 576, 684
SacI GAGCTC 1 cut(s) 3486
SalI GTCGAC 1 cut(s) 155
Sau96I GGNCC 6 cut(s) 413, 1925, 2203, 2428, 3670, 3803
ScaI AGTACT 3 cut(s) 471, 2262, 2777
SchI GAGTC 4 cut(s) 113, 1069, 3167, 3703
ScrFI CCNGG 6 cut(s) 621, 1794, 1857, 1929, 2431, 3051
SduI GDGCHC 3 cut(s) 2536, 3104, 3486
SfcI CTRYAG 2 cut(s) 2475, 3433
Sfr274I CTCGAG 1 cut(s) 2492
SfuI TTCGAA 1 cut(s) 2018
SinI GGWCC 2 cut(s) 1925, 3670
SlaI CTCGAG 1 cut(s) 2492
SmiMI CAYNNNNRTG 2 cut(s) 576, 684
SpeI ACTAGT 1 cut(s) 3058
SphI GCATGC 1 cut(s) 2596
SseBI AGGCCT 2 cut(s) 2124, 2994
SsiI CCGC 7 cut(s) 1822, 2386, 2586, 2803, 3361, 3763, 3801
SspI AATATT 1 cut(s) 1427
SstI GAGCTC 1 cut(s) 3486
StuI AGGCCT 2 cut(s) 2124, 2994
StyD4I CCNGG 6 cut(s) 619, 1792, 1855, 1927, 2429, 3049
StyI CCWWGG 2 cut(s) 45, 1585
TaaI ACNGT 8 cut(s) 487, 1875, 2360, 2479, 2921, 3068, 3304, 3429
TaiI ACGT 2 cut(s) 1621, 2876
TaqII GACCGA 2 cut(s) 972, 1878
TatI WGTACW 6 cut(s) 469, 778, 2113, 2260, 2775, 2898
TauI GCSGC 3 cut(s) 1825, 2389, 3804
TscAI CASTG 2 cut(s) 2484, 3032
TseFI GTSAC 7 cut(s) 49, 116, 567, 940, 953, 2816, 3423
TseI GCWGC 9 cut(s) 26, 62, 112, 407, 773, 2235, 3363, 3416, 3435
Tsp45I GTSAC 7 cut(s) 49, 116, 567, 940, 953, 2816, 3423
TspGWI ACGGA 3 cut(s) 3200, 3636, 3806
TspRI CASTG 2 cut(s) 2484, 3032
Tth111I GACNNNGTC 1 cut(s) 2950
Van91I CCANNNNNTGG 2 cut(s) 2095, 2264
Vha464I CTTAAG 1 cut(s) 736
VpaK11BI GGWCC 2 cut(s) 1925, 3670
VspI ATTAAT 1 cut(s) 1187
XbaI TCTAGA 3 cut(s) 2893, 3169, 3775
XceI RCATGY 3 cut(s) 1538, 2596, 3399
XcmI CCANNNNNNNNNTGG 1 cut(s) 2357
XhoI CTCGAG 1 cut(s) 2492
XmiI GTMKAC 3 cut(s) 156, 3063, 3400
XmnI GAANNNNTTC 6 cut(s) 311, 395, 981, 1237, 1788, 3573
ZrmI AGTACT 3 cut(s) 471, 2262, 2777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.