Rmu_sc0001729.1_g000007

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001729.1
Physical Location & Seq
Reverse (-)
36404 .. 39416
3013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001729.1_g000007.1.cds

Sequence Viewer

Length: 2916 bp
atgcacgatcttgtgcatgaatttgcaataaaagtatccaggtgtgagagctggacacaagacttcagtcatgggatggatgatagtgagattcgacatgatgcacggattcctactccagaagaaagtatgccaaacttcaatcatgagatgggtgattgtgagattcgacatgttgcacggatttctactccaaaactagaaagtatgtcagaaacaagtattgcaagactgcgttcactcttttcaatccatgtctctaatatcatttttccaaagttaagagctttacgtgtcttaagtttctatgaggctgagactcaagaattgccaaattcacttgacaagctgaaacacttgaggtatctagatctttcccatacagcaatcagaacactcccagagtttattggcaagctctacaacctccaaacattgagattaccatatctcgaaaagtgttcaaaggagattcaaaatttgatcaacttgaggcatctttatgttgataagagaatgaaatttgaggctgggattttggggcgattaactaatctccgaacattacgttacttcaacgtgtgtaaggagataggtcctgcaattgaggagttgggtgggttgaatcaattgagaggccacttaattattgatgggctagaaaatgtaagggatggagaagaagcgaagaatgcttgcttagtgaagaagagtcacttacatgagctgaaatttaaatggacacacggcggggtagctaatgaaaatcaaactgatgtactagatggcttggaacctcatggtgagctgcaaaggttaaacattgtaaatttcatgggtgctaaatttccgtcatggatactgagtctccaaaatttgaaggagattcgattagatggctgcaacaattgtgaaggagtgccgacactcggccatctacctaaactaagatctcttaaaattagtaagatgcacaagctgaaacgtgtgggagctgagttttatggtactggtacaaatttatttccagcactgaaaacattagacatctctaagtgcgaagagctcgttgaatggatggaagcaccagctgaaggagaagtcgtggtattcccttgcctcaaaaagttaaatatcagccgctgtcccaatttgggaaatgctccgagtcgttttccatgtcttaagacgttgagcatagttgatacgggcaacaatgtgacaatagaaaatgtaagcagtcaacttacccagcggaagagactcacttgcctaccggaagggatgttgaagaacaagtgtctcacctatttgatgataagtaattgtgatgagttgatcactcgtattgctcctgatgtatttggctgttgcgaatctcttcgatcacttgttgttcatagctgtaaaaaactaagtcatttacctgatgggctagacaaactccctcttcttaagcggttgttcatagctgattgtcccagcctcaagtcgattcggatcacacggggcatcgcatctctccgtgaattgaacatccagagttgtaagggattatcaagcctagaggttgggctccagtactgcacctctcttcagaacttgaatttccggggatgccccaatctgatgtcaattccaatcacacagtgcatgccgtctctccggacattgagtatcgtatcgtgtgagagattatcaagcctcggtgtgctcaactactgcacctctcttcagaaattggtgattgaagattgtaacaatctaacatcaattccaatcacacagggcatcacatctctccagaggttgaggatcgatggttgtgagagattatcaagcctaccgagtgggctccagtactgcacctctcttcaggaattgaaattcgggagctgccccaatctgatgtcaattccaatcacacagtgcatgccgtctctccggacattggatatcacatcgtgtaagagattatcaagcctaggtgtgctcgactactgcacctctcttcagcatctgaaaataaggcattgctctagtctagtaattccaatcacacagggcatcacatctctccagaggttgaggattgatggttgtgagagattatcaagcctaccgagtgggctccaattctgcacctctcttcagcatctgaaaataaggcattgctctagtctagtatcgatttcagtatcatatcatgtgtgcgaccaccaagactcaacgaatcaaccggaggaagtctttacaggtcttgttcagtatttgtctatacaggaagactgtcgtagtccagaatctattccagctgatctccgtcagtcgttgatatgtaattgtgggaaattgaaatatgagcccacaggatttcacagcctcactcgtttgaagaagctgagaattggtcccttctggaaggagctggacgccttccctgattttcagcttccaccaccacatgattcacaacttgaagagttacatttgtgggggtggcgtaagctcaagtctctgccccaacaaattcagcactacacttgtttaaaaactctctggataggtaagtttaagggactagaggctcttcctgagtggttgggaaatcttacatctcttgaggctctaagtatctcgttctgtgggaatctcacgtctctgcctacacaagatgctatgaaaagcctcaccaaattgaagaagctcaccatttctgcatgccccctgctcgaggaaagatgcaccaaggagactggccccgaatggcccaagatttctcacatcccagaacttgagtgtggggaaagctccgaaagtactgagaattcaacatcttctccaagaaatgctgggaatttaacatcttttccaagaaatgctgtgttggattgtttgccatgttgcattctttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

971

Amino Acids

109.21

Weight (kDa)

8.35

Isoelectric Point (pI)

52.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 2 cut(s) 1665, 1944
AciI CCGC 4 cut(s) 750, 1141, 1255, 1459
AclWI GGATC 2 cut(s) 1508, 1823
AcoI YGGCCR 1 cut(s) 931
AcuI CTGAAG 7 cut(s) 49, 1113, 1580, 1718, 1859, 1997, 2135
AcyI GRCGYC 1 cut(s) 2433
AdeI CACNNNGTG 3 cut(s) 1650, 1929, 1965
AfaI GTAC 6 cut(s) 780, 1009, 1015, 1583, 1862, 2821
AfiI CCNNNNNNNGG 5 cut(s) 929, 1094, 1154, 1951, 2734
AflII CTTAAG 3 cut(s) 298, 1184, 1454
AflIII ACRYGT 4 cut(s) 172, 292, 579, 985
AjiI CACGTC 1 cut(s) 2658
AjnI CCWGG 1 cut(s) 38
Alw21I GWGCWC 3 cut(s) 1068, 1716, 1995
AlwI GGATC 2 cut(s) 1508, 1823
AlwNI CAGNNNCTG 3 cut(s) 1143, 2020, 2158
Ama87I CYCGRG 1 cut(s) 2732
Aor13HI TCCGGA 2 cut(s) 1665, 1944
AoxI GGCC 4 cut(s) 637, 931, 2758, 2768
ApeKI GCWGC 3 cut(s) 808, 900, 1896
Asp700I GAANNNNTTC 2 cut(s) 1380, 2307
AspA2I CCTAGG 1 cut(s) 1984
AspS9I GGNCC 4 cut(s) 596, 2411, 2759, 2769
AsuC2I CCSGG 1 cut(s) 1613
AsuHPI GGTGA 6 cut(s) 167, 815, 1297, 1756, 2683, 2701
AvaI CYCGRG 1 cut(s) 2732
AvaII GGWCC 2 cut(s) 596, 2411
AvrII CCTAGG 1 cut(s) 1984
BanII GRGCYC 5 cut(s) 1068, 1578, 1857, 2133, 2367
BbsI GAAGAC 1 cut(s) 2292
Bbv12I GWGCWC 3 cut(s) 1068, 1716, 1995
BbvI GCAGC 3 cut(s) 795, 887, 1883
BceAI ACGGC 3 cut(s) 763, 1642, 1921
BciT130I CCWGG 1 cut(s) 40
BciVI GTATCC 2 cut(s) 46, 852
BclI TGATCA 2 cut(s) 483, 1338
BcnI CCSGG 1 cut(s) 1613
BfrI CTTAAG 3 cut(s) 298, 1184, 1454
BfuI GTATCC 2 cut(s) 46, 852
BglII AGATCT 2 cut(s) 370, 950
BisI GCNGC 4 cut(s) 809, 901, 1141, 1897
BlnI CCTAGG 1 cut(s) 1984
BlsI GCNGC 4 cut(s) 810, 902, 1142, 1898
BmcAI AGTACT 3 cut(s) 1583, 1862, 2821
Bme1390I CCNGG 2 cut(s) 40, 1613
Bme18I GGWCC 2 cut(s) 596, 2411
BmeT110I CYCGRG 1 cut(s) 2732
BmgBI CACGTC 1 cut(s) 2658
BmgT120I GGNCC 4 cut(s) 596, 2411, 2759, 2769
BmiI GGNNCC 6 cut(s) 795, 1577, 1856, 2132, 2413, 2761
BmrFI CCNGG 2 cut(s) 40, 1613
BoxI GACNNNNGTC 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 2292
BpmI CTGGAG 5 cut(s) 102, 1562, 1787, 1841, 2063
BpuEI CTTGAG 7 cut(s) 306, 379, 511, 1472, 2495, 2642, 2816
BpuMI CCSGG 1 cut(s) 1613
Bsa29I ATCGAT 2 cut(s) 1818, 2189
BsaAI YACGTR 1 cut(s) 293
BsaBI GATNNNNATC 1 cut(s) 1499
BsaHI GRCGYC 1 cut(s) 2433
BsaJI CCNNGG 4 cut(s) 1612, 1705, 1984, 2748
BsaWI WCCGGW 4 cut(s) 1276, 1665, 1944, 2239
BsaXI ACNNNNNCTCC 6 cut(s) 852, 882, 1089, 1119, 2824, 2854
Bsc4I CCNNNNNNNGG 5 cut(s) 929, 1094, 1154, 1951, 2734
Bse1I ACTGG 4 cut(s) 1015, 1579, 1858, 2761
Bse3DI GCAATG 2 cut(s) 2032, 2170
Bse8I GATNNNNATC 1 cut(s) 1499
BseAI TCCGGA 2 cut(s) 1665, 1944
BseBI CCWGG 1 cut(s) 40
BseCI ATCGAT 2 cut(s) 1818, 2189
BseDI CCNNGG 4 cut(s) 1612, 1705, 1984, 2748
BseGI GGATG 8 cut(s) 81, 85, 679, 1083, 1290, 1536, 1622, 2784
BseJI GATNNNNATC 1 cut(s) 1499
BseLI CCNNNNNNNGG 5 cut(s) 929, 1094, 1154, 1951, 2734
BseMI GCAATG 2 cut(s) 2032, 2170
BseMII CTCAG 6 cut(s) 306, 854, 987, 2393, 2586, 2814
BseNI ACTGG 4 cut(s) 1015, 1579, 1858, 2761
BseRI GAGGAG 1 cut(s) 623
BseXI GCAGC 3 cut(s) 795, 887, 1883
BseYI CCCAGC 4 cut(s) 530, 1251, 1481, 2852
BsgI GTGCAG 5 cut(s) 1570, 1708, 1849, 1987, 2125
BshFI GGCC 4 cut(s) 639, 933, 2760, 2770
BshVI ATCGAT 2 cut(s) 1818, 2189
BsiHKAI GWGCWC 3 cut(s) 1068, 1716, 1995
BsiHKCI CYCGRG 1 cut(s) 2732
BsiSI CCGG 5 cut(s) 1277, 1612, 1666, 1945, 2240
BslFI GGGAC 4 cut(s) 1131, 1464, 2397, 2592
BslI CCNNNNNNNGG 5 cut(s) 929, 1094, 1154, 1951, 2734
BsmBI CGTCTC 3 cut(s) 1665, 1944, 2664
BsmFI GGGAC 4 cut(s) 1131, 1464, 2397, 2592
BsmI GAATGC 2 cut(s) 697, 2907
BsnI GGCC 4 cut(s) 639, 933, 2760, 2770
BsoBI CYCGRG 1 cut(s) 2732
Bsp1286I GDGCHC 7 cut(s) 1068, 1578, 1716, 1857, 1995, 2133, 2367
Bsp13I TCCGGA 2 cut(s) 1665, 1944
Bsp143I GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
BspACI CCGC 4 cut(s) 750, 1141, 1255, 1459
BspANI GGCC 4 cut(s) 639, 933, 2760, 2770
BspCNI CTCAG 6 cut(s) 307, 855, 988, 2394, 2587, 2815
BspDI ATCGAT 2 cut(s) 1818, 2189
BspEI TCCGGA 2 cut(s) 1665, 1944
BspHI TCATGA 1 cut(s) 145
BspLI GGNNCC 6 cut(s) 795, 1577, 1856, 2132, 2413, 2761
BspPI GGATC 2 cut(s) 1508, 1823
BspQI GCTCTTC 2 cut(s) 1056, 2595
BspTI CTTAAG 3 cut(s) 298, 1184, 1454
BsrDI GCAATG 2 cut(s) 2032, 2170
BsrI ACTGG 4 cut(s) 1015, 1579, 1858, 2761
BssECI CCNNGG 4 cut(s) 1612, 1705, 1984, 2748
BssMI GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
BssNI GRCGYC 1 cut(s) 2433
BssT1I CCWWGG 2 cut(s) 1984, 2748
Bst2UI CCWGG 1 cut(s) 40
Bst4CI ACNGT 3 cut(s) 1650, 1929, 2291
BstACI GRCGYC 1 cut(s) 2433
BstAFI CTTAAG 3 cut(s) 298, 1184, 1454
BstBAI YACGTR 1 cut(s) 293
BstC8I GCNNGC 5 cut(s) 416, 697, 1655, 1934, 2722
BstENI CCTNNNNNAGG 1 cut(s) 2732
BstF5I GGATG 8 cut(s) 81, 85, 679, 1083, 1290, 1536, 1622, 2784
BstKTI GATC 9 cut(s) 10, 373, 486, 953, 1341, 1388, 1503, 1818, 2320
BstMBI GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
BstMWI GCNNNNNNNGC 1 cut(s) 692
BstNI CCWGG 1 cut(s) 40
BstNSI RCATGY 4 cut(s) 176, 1657, 1936, 2724
BstPAI GACNNNNGTC 1 cut(s) 66
BstSCI CCNGG 2 cut(s) 38, 1611
BstV1I GCAGC 3 cut(s) 795, 887, 1883
BstV2I GAAGAC 1 cut(s) 2292
BstX2I RGATCY 2 cut(s) 370, 950
BstYI RGATCY 2 cut(s) 370, 950
Bsu15I ATCGAT 2 cut(s) 1818, 2189
BsuI GTATCC 2 cut(s) 46, 852
BsuRI GGCC 4 cut(s) 639, 933, 2760, 2770
BsuTUI ATCGAT 2 cut(s) 1818, 2189
BtgZI GCGATG 1 cut(s) 1498
BtrI CACGTC 1 cut(s) 2658
BtsCI GGATG 8 cut(s) 81, 85, 679, 1083, 1290, 1536, 1622, 2784
BtsIMutI CAGTG 3 cut(s) 1031, 1655, 1934
Cac8I GCNNGC 5 cut(s) 416, 697, 1655, 1934, 2722
CaiI CAGNNNCTG 3 cut(s) 1143, 2020, 2158
CciI TCATGA 1 cut(s) 145
Cfr13I GGNCC 4 cut(s) 596, 2411, 2759, 2769
ClaI ATCGAT 2 cut(s) 1818, 2189
CseI GACGC 1 cut(s) 2441
Csp6I GTAC 6 cut(s) 779, 1008, 1014, 1582, 1861, 2820
CviQI GTAC 6 cut(s) 779, 1008, 1014, 1582, 1861, 2820
DpnI GATC 9 cut(s) 9, 372, 485, 952, 1340, 1387, 1502, 1817, 2319
DpnII GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
DraI TTTAAA 2 cut(s) 736, 2550
DraIII CACNNNGTG 3 cut(s) 1650, 1929, 1965
EaeI YGGCCR 1 cut(s) 931
Ecl136II GAGCTC 1 cut(s) 1066
Eco130I CCWWGG 2 cut(s) 1984, 2748
Eco24I GRGCYC 5 cut(s) 1068, 1578, 1857, 2133, 2367
Eco32I GATATC 1 cut(s) 1957
Eco47I GGWCC 2 cut(s) 596, 2411
Eco53kI GAGCTC 1 cut(s) 1066
Eco57I CTGAAG 7 cut(s) 49, 1113, 1580, 1718, 1859, 1997, 2135
Eco88I CYCGRG 1 cut(s) 2732
EcoICRI GAGCTC 1 cut(s) 1066
EcoNI CCTNNNNNAGG 1 cut(s) 2732
EcoO109I RGGNCCY 1 cut(s) 596
EcoRI GAATTC 1 cut(s) 2827
EcoRII CCWGG 1 cut(s) 38
EcoRV GATATC 1 cut(s) 1957
EcoT14I CCWWGG 2 cut(s) 1984, 2748
EcoT38I GRGCYC 5 cut(s) 1068, 1578, 1857, 2133, 2367
ErhI CCWWGG 2 cut(s) 1984, 2748
Esp3I CGTCTC 3 cut(s) 1665, 1944, 2664
FalI AAGNNNNNCTT 2 cut(s) 701, 733
FaqI GGGAC 4 cut(s) 1131, 1464, 2397, 2592
FauI CCCGC 1 cut(s) 743
FbaI TGATCA 2 cut(s) 483, 1338
Fnu4HI GCNGC 4 cut(s) 809, 901, 1141, 1897
FokI GGATG 8 cut(s) 88, 92, 686, 1090, 1297, 1523, 1629, 2771
FriOI GRGCYC 5 cut(s) 1068, 1578, 1857, 2133, 2367
Fsp4HI GCNGC 4 cut(s) 809, 901, 1141, 1897
GluI GCNGC 4 cut(s) 809, 901, 1141, 1897
GsaI CCCAGC 4 cut(s) 534, 1255, 1485, 2856
GsuI CTGGAG 5 cut(s) 102, 1562, 1787, 1841, 2063
HaeIII GGCC 4 cut(s) 639, 933, 2760, 2770
HapII CCGG 5 cut(s) 1277, 1612, 1666, 1945, 2240
HgaI GACGC 1 cut(s) 2441
Hin1I GRCGYC 1 cut(s) 2433
HincII GTYRAC 1 cut(s) 1244
HindII GTYRAC 1 cut(s) 1244
HpaII CCGG 5 cut(s) 1277, 1612, 1666, 1945, 2240
HphI GGTGA 6 cut(s) 167, 815, 1297, 1756, 2683, 2701
Hpy166II GTNNAC 2 cut(s) 239, 1244
Hpy8I GTNNAC 2 cut(s) 239, 1244
HpyAV CCTTC 7 cut(s) 874, 908, 1088, 1274, 2416, 2425, 2446
HpyCH4III ACNGT 3 cut(s) 1650, 1929, 2291
HpyCH4IV ACGT 6 cut(s) 292, 568, 579, 985, 1190, 2657
HpyF10VI GCNNNNNNNGC 1 cut(s) 692
HpySE526I ACGT 6 cut(s) 292, 568, 579, 985, 1190, 2657
Hsp92I GRCGYC 1 cut(s) 2433
Kpn2I TCCGGA 2 cut(s) 1665, 1944
Ksp22I TGATCA 2 cut(s) 483, 1338
Kzo9I GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
LguI GCTCTTC 2 cut(s) 1056, 2595
LmnI GCTCC 9 cut(s) 992, 1168, 1357, 1581, 1860, 1893, 2136, 2425, 2816
Lsp1109I GCAGC 3 cut(s) 795, 887, 1883
MaeII ACGT 6 cut(s) 292, 568, 579, 985, 1190, 2657
MaeIII GTNAC 5 cut(s) 569, 713, 1219, 1757, 2484
MalI GATC 9 cut(s) 9, 372, 485, 952, 1340, 1387, 1502, 1817, 2319
MboI GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
MfeI CAATTG 3 cut(s) 603, 629, 907
MflI RGATCY 2 cut(s) 370, 950
MhlI GDGCHC 7 cut(s) 1068, 1578, 1716, 1857, 1995, 2133, 2367
MlyI GAGTC 6 cut(s) 313, 721, 874, 1177, 1257, 2219
MmeI TCCRAC 1 cut(s) 2868
MroI TCCGGA 2 cut(s) 1665, 1944
MroXI GAANNNNTTC 2 cut(s) 1380, 2307
MslI CAYNNNNRTG 2 cut(s) 501, 720
MspA1I CMGCKG 4 cut(s) 1091, 1143, 1255, 2315
MspCI CTTAAG 3 cut(s) 298, 1184, 1454
MspI CCGG 5 cut(s) 1277, 1612, 1666, 1945, 2240
MspR9I CCNGG 2 cut(s) 40, 1613
MunI CAATTG 3 cut(s) 603, 629, 907
Mva1269I GAATGC 2 cut(s) 697, 2907
MvaI CCWGG 1 cut(s) 40
MwoI GCNNNNNNNGC 1 cut(s) 692
NciI CCSGG 1 cut(s) 1613
NdeII GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
NlaIV GGNNCC 6 cut(s) 795, 1577, 1856, 2132, 2413, 2761
NmeAIII GCCGAG 1 cut(s) 909
NmuCI GTSAC 2 cut(s) 713, 1219
NspI RCATGY 4 cut(s) 176, 1657, 1936, 2724
PaeI GCATGC 3 cut(s) 1657, 1936, 2724
PaeR7I CTCGAG 1 cut(s) 2732
PagI TCATGA 1 cut(s) 145
PciI ACATGT 1 cut(s) 172
PciSI GCTCTTC 2 cut(s) 1056, 2595
PctI GAATGC 2 cut(s) 697, 2907
PdmI GAANNNNTTC 2 cut(s) 1380, 2307
PkrI GCNGC 4 cut(s) 810, 902, 1142, 1898
PleI GAGTC 6 cut(s) 313, 720, 873, 1176, 1257, 2219
PpsI GAGTC 6 cut(s) 313, 720, 873, 1176, 1257, 2219
Ppu21I YACGTR 1 cut(s) 293
PpuMI RGGWCCY 1 cut(s) 596
PscI ACATGT 1 cut(s) 172
PshAI GACNNNNGTC 1 cut(s) 66
Psp124BI GAGCTC 1 cut(s) 1068
Psp5II RGGWCCY 1 cut(s) 596
Psp6I CCWGG 1 cut(s) 38
PspFI CCCAGC 4 cut(s) 530, 1251, 1481, 2852
PspGI CCWGG 1 cut(s) 38
PspN4I GGNNCC 6 cut(s) 795, 1577, 1856, 2132, 2413, 2761
PspPI GGNCC 4 cut(s) 596, 2411, 2759, 2769
PspPPI RGGWCCY 1 cut(s) 596
PspXI VCTCGAGB 1 cut(s) 2732
PstNI CAGNNNCTG 3 cut(s) 1143, 2020, 2158
PsuI RGATCY 2 cut(s) 370, 950
PvuII CAGCTG 2 cut(s) 1091, 2315
RsaI GTAC 6 cut(s) 780, 1009, 1015, 1583, 1862, 2821
RsaNI GTAC 6 cut(s) 779, 1008, 1014, 1582, 1861, 2820
RseI CAYNNNNRTG 2 cut(s) 501, 720
SacI GAGCTC 1 cut(s) 1068
SapI GCTCTTC 2 cut(s) 1056, 2595
SatI GCNGC 4 cut(s) 809, 901, 1141, 1897
Sau3AI GATC 9 cut(s) 7, 370, 483, 950, 1338, 1385, 1500, 1815, 2317
Sau96I GGNCC 4 cut(s) 596, 2411, 2759, 2769
ScaI AGTACT 3 cut(s) 1583, 1862, 2821
SchI GAGTC 6 cut(s) 313, 721, 874, 1177, 1257, 2219
ScrFI CCNGG 2 cut(s) 40, 1613
SduI GDGCHC 7 cut(s) 1068, 1578, 1716, 1857, 1995, 2133, 2367
Sfr274I CTCGAG 1 cut(s) 2732
SinI GGWCC 2 cut(s) 596, 2411
SlaI CTCGAG 1 cut(s) 2732
SmiI ATTTAAAT 1 cut(s) 736
SmiMI CAYNNNNRTG 2 cut(s) 501, 720
SphI GCATGC 3 cut(s) 1657, 1936, 2724
SsiI CCGC 4 cut(s) 750, 1141, 1255, 1459
SstI GAGCTC 1 cut(s) 1068
StyD4I CCNGG 2 cut(s) 38, 1611
StyI CCWWGG 2 cut(s) 1984, 2748
SwaI ATTTAAAT 1 cut(s) 736
TaaI ACNGT 3 cut(s) 1650, 1929, 2291
TaiI ACGT 6 cut(s) 295, 571, 582, 988, 1193, 2660
TatI WGTACW 4 cut(s) 778, 1581, 1860, 2819
TauI GCSGC 1 cut(s) 1143
TscAI CASTG 3 cut(s) 1038, 1655, 1934
TseFI GTSAC 2 cut(s) 713, 1219
TseI GCWGC 3 cut(s) 808, 900, 1896
Tsp45I GTSAC 2 cut(s) 713, 1219
TspDTI ATGAA 7 cut(s) 33, 533, 777, 823, 1388, 1456, 2696
TspGWI ACGGA 5 cut(s) 121, 196, 840, 1514, 2312
TspRI CASTG 3 cut(s) 1038, 1655, 1934
Vha464I CTTAAG 3 cut(s) 298, 1184, 1454
VpaK11BI GGWCC 2 cut(s) 596, 2411
XagI CCTNNNNNAGG 1 cut(s) 2732
XbaI TCTAGA 1 cut(s) 367
XceI RCATGY 4 cut(s) 176, 1657, 1936, 2724
XhoI CTCGAG 1 cut(s) 2732
XmaJI CCTAGG 1 cut(s) 1984
XmnI GAANNNNTTC 2 cut(s) 1380, 2307
ZrmI AGTACT 3 cut(s) 1583, 1862, 2821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.