Rw4G020720

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
44742566 .. 44746646
4081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G020720.1

Sequence Viewer

Length: 2811 bp
ATGGAAACTCTTCCTAGATGTGATTTAAGAAAACTATCAGATGATGAATGCTGGCTCATTTTGAAGGATAAAGCCATTCCAATTGGGAGTCCTCCTATGTCTAAAGAGCAGGAGATAATTGGTAAAGAGATCGCTAAAAGATGTGGAGGTCTACCACTAGTGTCAAAGAATTTTTCAATTTTGAAGCTAAGTTTCGATGAATTGAAACCTCCTTCCTTGAAACAATGTTTTGCATATTGCTCGATGTTCTTCAAAGATTTTGATATTGAAAAGGATGACTTGATCCAACTTTGGATGGCTCAGGGATGGCTTGACCCATGTTCTAACAAAATCTTAGAGATGGAGGAGAGAGGTAATGATTATTTTAGAATCCTATTGGCTAAGTCTTTTTTTCAAGACGTTACAAAGGATTATGGTGGTAATGTTACCAAATGTAAGATGCACGATCTTGTGCATGATCTTGCACAACGTGTTTCAAAGTCAAGGGACTTACGCTCACTTTTTTCAAATGGAGAAGTTCTTGAGAGCAACGTACTTAACTTTAAAACTTTACGTGTCTTAAATTTATACAAAGCAGACATTATGGAGTTGCCAATTTCAATTGGGAAGTTGAAACATTTGAGGTATTTGAATGTTTTGAAAACAAGAATTAAAACATTTCCCAAAACAATAGGCCAGCTTTATAACCTGCAAACTTTGAAAATACCTTATCAGCTTGAAGAGTTTCCAAAGGAAATTGCAAATTTGATCAACTTGCGGCACATTTATTTTGGTAGATATATGAAAGTTCCAAGTGGGATATTGGGACGGTTCACCAATCTCCGATCATTACCTTTTCTCAAGGTGGGTAAAGAGACGGGTCCTAGAATTGACGAATTGGGTTGTTTAAACCAGTTGCACGACACCTTGTCTATATATGGACTGGAAAATGTAGGAGATGGAGAAGAAGCTCTGAAAGCAAACTTGGTCGAGAAGAAACATATACGCAAGTTAATCCTTGATTGGAAGCTTAGTAGGCCAAGCCACAACGTGGAGAATGACGACAATGTACTAGAAGGCCTCCAACCACATTCTAGTTTGGAATTTTTAGAGATTCAGGGATTTATGGGTGTTAAATTTCCATCATGGTTACTCCTAGGCAACCATTTGAAGGAGATTGAATTATCGGGCTGCAAAAAATGTGACGGAGTCCCAGTACTTGGGCATTTACCTAATCTTAGTTGTGTTAAGATTAAGAGAATGGAGAACCTAGCTCGTATGGGATCTGAGTTCTATGGTGATGACCATGTTAATAACTATGGAAATGGATCAAGTAACGAGGCGCGACCTTTGTTCCCTGCTTTGAAAACATTGCATATTGAGTGGGCCCAAAACCTACTCGAGTGGATGGAAGCGCCAACAGAAAGAGCAAGTGTGGTGTTTCCATGTCTCGAGGAGCTGACCTTGATTAAATGTGACAGACTGACAAGTGCTCCCAGTCATTTCCCATCTCTCAAGAAGTTGGTCATAGAATGGATGGATAGCGGAGGCATGCCAATAGCAAGTATTCTCAGCAATCAACTCACAACACTCACTTATCTCAGATTATTGCGTGTGGGGGGACTTGCTTGTCTGCCGGAAGGGCTGTTAGAAAACAACAAGGATCTTGCACATTTAGACATAAGTCAGTGTTCAGATTTAACTTGTATTTCTCCTCGATCGCAAGGATTAGAGTACTGTTGCGCATCTCTTTCATACTTGGGGCTAAGTTATTGTGAGAATCTCAGATATTTACCTGATGGGCTACTCACTCCTTCTCTTAAAGAGATGACGTTGTATGCTTGTGACAATCTGGAGTACATCCCAGATGCTACACATGGTGGTCTCACATCCCTTGAAACATTGTCTTTGACAATGTGCTATAAAATAACTTCCATTCCATTTTCACAAGGCCTGCCATCTCTTGGTGAATTACATATAGACGAGTGTCCGGAATTATCAAGCCTACCGAGTGGACTAGAGTACTGTACCTCTATTCGGAGTTTGTCAATAACAGCTTGCCCCAAGGTACCATCCATTTCAATCGAAAGTCTGAGTGCATCCCTCGAAGATTTGTGTGTAAGTAATCTACACTCTCTTCCAATTTCACGAGGAGGCTTCACATCACTCCGTCATTTGAGAATTGAGCGCGGAGAAAGTGCCCAAATTGGGCCAGAATTTAGTGCCTTTCTTCAAACCCTCGTCTCTCTTGAAAAATTGACTATGAGGTTTTGTAAAATTCTAGAGAGTATTCCAAGTTTAGACAAGCTCACATCCCTCCGCAGCTTGGAGATTAGTCGGTGTAATAAATTAACATGTCTACCGAATGGGTTAGCAGCATCGTCACAGTCCTGCAGCCTCACCCGTTTGAAGGAATTGACAATTGGTGAGTTCAGCGAGGATCTCGATGCATTCCCAGCTTTTCAGGCTATACCACAGCTTGAATCATTAACCATCTGGGGGTGGGATAAGCTCAAGTCTCTCCCTGAACAAATTCAACACTTGCCTTCTTTAAGGCATTTGGAAATAAATTGGTTTCGTGGAGTGGAGGCTATTCCAGAGTGGTTGGGAAACCTTGCATCTCTTGAGGACCTGACTATTTGGTTTTGCGAGACTCTGAAGTATCTTCCTTCTGTGGAAGCAATGCAACGCCTCACCAAATTGAAAGAGATAAACATCTACGACTGCCCCCTCCTAGAAGAAAGATGCAGGGAGGAGAGCGGCTCAGAGTGGCCAAAGATTCGTCATATTCCATTCATCACGATTGAGGATACAAAAATCGAGAATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

936

Amino Acids

105.79

Weight (kDa)

5.83

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 82 - 155 6.8e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 165 - 417 4.8e-28 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 290 - 414 4e-35 R13L1/DRL21 LRRs
LRR_14 PF23598 695 - 850 2.4e-11 Leucine-rich repeat region
LRR_RPS2 PF23247 764 - 902 6.9e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 832 - 901 2.8e-06 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 836 - 895 6.8e-08 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 684
AasI GACNNNNNNGTC 1 cut(s) 1608
Acc16I TGCGCA 1 cut(s) 1723
Acc36I ACCTGC 1 cut(s) 696
Acc65I GGTACC 1 cut(s) 2047
AccB1I GGYRCC 1 cut(s) 2047
AccB7I CCANNNNNTGG 3 cut(s) 1030, 1199, 1943
AccBSI CCGCTC 1 cut(s) 2739
AccI GTMKAC 2 cut(s) 151, 2338
AccII CGCG 2 cut(s) 1324, 2169
AccIII TCCGGA 1 cut(s) 1969
AciI CCGC 5 cut(s) 757, 1524, 2169, 2299, 2739
AclWI GGATC 5 cut(s) 277, 1270, 1315, 1650, 2427
AcoI YGGCCR 1 cut(s) 2750
AcsI RAATTY 8 cut(s) 169, 562, 742, 1082, 1115, 2195, 2256, 2511
AcuI CTGAAG 1 cut(s) 2657
AdeI CACNNNGTG 3 cut(s) 470, 1030, 1859
AfaI GTAC 8 cut(s) 534, 1050, 1197, 1715, 1838, 2003, 2008, 2049
AfiI CCNNNNNNNGG 9 cut(s) 1030, 1150, 1199, 1943, 2016, 2187, 2305, 2389, 2478
AflIII ACRYGT 3 cut(s) 469, 553, 2333
AhdI GACNNNNNGTC 1 cut(s) 907
AhlI ACTAGT 1 cut(s) 157
AjuI GAANNNNNNNTTGG 4 cut(s) 947, 979, 2385, 2417
Alw21I GWGCWC 1 cut(s) 1474
Alw26I GTCTC 6 cut(s) 848, 1433, 1868, 2227, 2502, 2624
AlwI GGATC 5 cut(s) 277, 1270, 1315, 1650, 2427
Ama87I CYCGRG 2 cut(s) 1379, 1430
Aor13HI TCCGGA 1 cut(s) 1969
AoxI GGCC 7 cut(s) 673, 1016, 1057, 1365, 1930, 2189, 2750
ApaI GGGCCC 1 cut(s) 1369
ApeKI GCWGC 4 cut(s) 1170, 2301, 2354, 2373
ApoI RAATTY 8 cut(s) 169, 562, 742, 1082, 1115, 2195, 2256, 2511
Asp700I GAANNNNTTC 3 cut(s) 9, 723, 2511
Asp718I GGTACC 1 cut(s) 2047
AspA2I CCTAGG 1 cut(s) 1135
AspLEI GCGC 4 cut(s) 1324, 1396, 1724, 2169
AspS9I GGNCC 5 cut(s) 860, 1365, 1366, 2189, 2608
AsuHPI GGTGA 6 cut(s) 805, 1289, 1958, 2371, 2417, 2665
AvaI CYCGRG 2 cut(s) 1379, 1430
AvaII GGWCC 2 cut(s) 860, 2608
AvrII CCTAGG 1 cut(s) 1135
BaeGI GKGCMC 2 cut(s) 1369, 2182
BalI TGGCCA 1 cut(s) 2752
BanI GGYRCC 1 cut(s) 2047
BanII GRGCYC 1 cut(s) 1369
BauI CACGAG 1 cut(s) 2127
Bbv12I GWGCWC 1 cut(s) 1474
BbvI GCAGC 4 cut(s) 1157, 2313, 2366, 2385
BcgI CGANNNNNNTGC 2 cut(s) 222, 256
BciVI GTATCC 1 cut(s) 2782
BclI TGATCA 1 cut(s) 747
BcoDI GTCTC 6 cut(s) 848, 1433, 1868, 2227, 2502, 2624
BcuI ACTAGT 1 cut(s) 157
BfmI CTRYAG 1 cut(s) 2371
BfoI RGCGCY 1 cut(s) 1397
BfuAI ACCTGC 1 cut(s) 696
BfuI GTATCC 1 cut(s) 2782
BglI GCCNNNNNGGC 1 cut(s) 1621
BisI GCNGC 6 cut(s) 758, 1171, 2302, 2355, 2374, 2740
BlnI CCTAGG 1 cut(s) 1135
BlsI GCNGC 6 cut(s) 759, 1172, 2303, 2356, 2375, 2741
BmcAI AGTACT 3 cut(s) 1197, 1715, 2003
Bme18I GGWCC 2 cut(s) 860, 2608
BmeRI GACNNNNNGTC 1 cut(s) 907
BmeT110I CYCGRG 2 cut(s) 1379, 1430
BmgT120I GGNCC 5 cut(s) 860, 1365, 1366, 2189, 2608
BmiI GGNNCC 3 cut(s) 861, 1367, 2049
BmrI ACTGGG 2 cut(s) 1187, 1470
BmsI GCATC 8 cut(s) 429, 1733, 1837, 2087, 2366, 2416, 2606, 2714
BmuI ACTGGG 2 cut(s) 1187, 1470
BoxI GACNNNNGTC 2 cut(s) 1662, 1965
BplI GAGNNNNNCTC 2 cut(s) 2726, 2758
BpmI CTGGAG 1 cut(s) 1853
Bpu10I CCTNAGC 1 cut(s) 300
BpuEI CTTGAG 5 cut(s) 542, 824, 1478, 2477, 2624
BsaAI YACGTR 1 cut(s) 554
BsaBI GATNNNNATC 1 cut(s) 2693
BsaI GGTCTC 1 cut(s) 1868
BsaJI CCNNGG 2 cut(s) 1135, 2043
BsaWI WCCGGW 1 cut(s) 1969
BsaXI ACNNNNNCTCC 4 cut(s) 1179, 1209, 1456, 1486
Bsc4I CCNNNNNNNGG 9 cut(s) 1030, 1150, 1199, 1943, 2016, 2187, 2305, 2389, 2478
Bse1I ACTGG 4 cut(s) 892, 927, 1193, 1476
Bse3DI GCAATG 2 cut(s) 1349, 2667
Bse8I GATNNNNATC 1 cut(s) 2693
BseAI TCCGGA 1 cut(s) 1969
BseDI CCNNGG 2 cut(s) 1135, 2043
BseJI GATNNNNATC 1 cut(s) 2693
BseLI CCNNNNNNNGG 9 cut(s) 1030, 1150, 1199, 1943, 2016, 2187, 2305, 2389, 2478
BseMI GCAATG 2 cut(s) 1349, 2667
BseMII CTCAG 7 cut(s) 314, 1257, 1564, 1594, 1777, 2063, 2757
BseNI ACTGG 4 cut(s) 892, 927, 1193, 1476
BseRI GAGGAG 5 cut(s) 359, 1448, 1683, 2145, 2747
BseSI GKGCMC 2 cut(s) 1369, 2182
BseXI GCAGC 4 cut(s) 1157, 2313, 2366, 2385
BseYI CCCAGC 1 cut(s) 2434
Bsh1236I CGCG 2 cut(s) 1324, 2169
Bsh1285I CGRYCG 1 cut(s) 1700
BshFI GGCC 7 cut(s) 675, 1018, 1059, 1367, 1932, 2191, 2752
BshNI GGYRCC 1 cut(s) 2047
BsiEI CGRYCG 1 cut(s) 1700
BsiHKAI GWGCWC 1 cut(s) 1474
BsiHKCI CYCGRG 2 cut(s) 1379, 1430
BsiSI CCGG 2 cut(s) 1616, 1970
BslFI GGGAC 4 cut(s) 500, 819, 1175, 1614
BslI CCNNNNNNNGG 9 cut(s) 1030, 1150, 1199, 1943, 2016, 2187, 2305, 2389, 2478
BsmAI GTCTC 6 cut(s) 848, 1433, 1868, 2227, 2502, 2624
BsmBI CGTCTC 2 cut(s) 848, 2227
BsmFI GGGAC 4 cut(s) 500, 819, 1175, 1614
BsmI GAATGC 2 cut(s) 53, 2429
BsnI GGCC 7 cut(s) 675, 1018, 1059, 1367, 1932, 2191, 2752
Bso31I GGTCTC 1 cut(s) 1868
BsoBI CYCGRG 2 cut(s) 1379, 1430
Bsp120I GGGCCC 1 cut(s) 1365
Bsp1286I GDGCHC 3 cut(s) 1369, 1474, 2182
Bsp13I TCCGGA 1 cut(s) 1969
BspACI CCGC 5 cut(s) 757, 1524, 2169, 2299, 2739
BspANI GGCC 7 cut(s) 675, 1018, 1059, 1367, 1932, 2191, 2752
BspCNI CTCAG 7 cut(s) 313, 1258, 1563, 1593, 1776, 2064, 2756
BspEI TCCGGA 1 cut(s) 1969
BspFNI CGCG 2 cut(s) 1324, 2169
BspLI GGNNCC 3 cut(s) 861, 1367, 2049
BspMAI CTGCAG 1 cut(s) 2375
BspMI ACCTGC 1 cut(s) 696
BspPI GGATC 5 cut(s) 277, 1270, 1315, 1650, 2427
BspT107I GGYRCC 1 cut(s) 2047
BspTNI GGTCTC 1 cut(s) 1868
BsrBI CCGCTC 1 cut(s) 2739
BsrDI GCAATG 2 cut(s) 1349, 2667
BsrI ACTGG 4 cut(s) 892, 927, 1193, 1476
BssECI CCNNGG 2 cut(s) 1135, 2043
BssSI CACGAG 1 cut(s) 2127
BssT1I CCWWGG 2 cut(s) 1135, 2043
Bst2BI CACGAG 1 cut(s) 2127
Bst4CI ACNGT 4 cut(s) 810, 1718, 2006, 2367
Bst6I CTCTTC 3 cut(s) 15, 714, 2121
BstBAI YACGTR 1 cut(s) 554
BstC8I GCNNGC 5 cut(s) 53, 677, 1532, 1934, 2038
BstFNI CGCG 2 cut(s) 1324, 2169
BstH2I RGCGCY 1 cut(s) 1397
BstHHI GCGC 4 cut(s) 1324, 1396, 1724, 2169
BstMAI GTCTC 6 cut(s) 848, 1433, 1868, 2227, 2502, 2624
BstMCI CGRYCG 1 cut(s) 1700
BstMWI GCNNNNNNNGC 5 cut(s) 956, 1015, 1621, 2435, 2444
BstNSI RCATGY 2 cut(s) 1534, 2337
BstPAI GACNNNNGTC 2 cut(s) 1662, 1965
BstSFI CTRYAG 1 cut(s) 2371
BstSLI GKGCMC 2 cut(s) 1369, 2182
BstUI CGCG 2 cut(s) 1324, 2169
BstV1I GCAGC 4 cut(s) 1157, 2313, 2366, 2385
BstX2I RGATCY 3 cut(s) 1262, 1642, 2419
BstYI RGATCY 3 cut(s) 1262, 1642, 2419
BsuI GTATCC 1 cut(s) 2782
BsuRI GGCC 7 cut(s) 675, 1018, 1059, 1367, 1932, 2191, 2752
BtsIMutI CAGTG 1 cut(s) 1673
BveI ACCTGC 1 cut(s) 696
Cac8I GCNNGC 5 cut(s) 53, 677, 1532, 1934, 2038
CfoI GCGC 4 cut(s) 1324, 1396, 1724, 2169
Cfr13I GGNCC 5 cut(s) 860, 1365, 1366, 2189, 2608
Csp6I GTAC 8 cut(s) 533, 1049, 1196, 1714, 1837, 2002, 2007, 2048
CviAII CATG 8 cut(s) 318, 455, 1125, 1286, 1425, 1531, 1856, 2334
CviQI GTAC 8 cut(s) 533, 1049, 1196, 1714, 1837, 2002, 2007, 2048
DraI TTTAAA 2 cut(s) 544, 888
DraIII CACNNNGTG 3 cut(s) 470, 1030, 1859
DrdI GACNNNNNNGTC 1 cut(s) 1608
DriI GACNNNNNGTC 1 cut(s) 907
DseDI GACNNNNNNGTC 1 cut(s) 1608
EaeI YGGCCR 1 cut(s) 2750
Eam1104I CTCTTC 3 cut(s) 15, 714, 2121
Eam1105I GACNNNNNGTC 1 cut(s) 907
EarI CTCTTC 3 cut(s) 15, 714, 2121
Eco130I CCWWGG 2 cut(s) 1135, 2043
Eco147I AGGCCT 2 cut(s) 1059, 1932
Eco24I GRGCYC 1 cut(s) 1369
Eco31I GGTCTC 1 cut(s) 1868
Eco47I GGWCC 2 cut(s) 860, 2608
Eco57I CTGAAG 1 cut(s) 2657
Eco88I CYCGRG 2 cut(s) 1379, 1430
EcoO109I RGGNCCY 2 cut(s) 860, 2608
EcoT14I CCWWGG 2 cut(s) 1135, 2043
EcoT22I ATGCAT 1 cut(s) 2431
EcoT38I GRGCYC 1 cut(s) 1369
ErhI CCWWGG 2 cut(s) 1135, 2043
Esp3I CGTCTC 2 cut(s) 848, 2227
FaeI CATG 8 cut(s) 321, 458, 1128, 1289, 1428, 1534, 1859, 2337
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 4 cut(s) 500, 819, 1175, 1614
FatI CATG 8 cut(s) 317, 454, 1124, 1285, 1424, 1530, 1855, 2333
FbaI TGATCA 1 cut(s) 747
FblI GTMKAC 2 cut(s) 151, 2338
Fnu4HI GCNGC 6 cut(s) 758, 1171, 2302, 2355, 2374, 2740
FriOI GRGCYC 1 cut(s) 1369
Fsp4HI GCNGC 6 cut(s) 758, 1171, 2302, 2355, 2374, 2740
FspI TGCGCA 1 cut(s) 1723
GlaI GCGC 4 cut(s) 1323, 1395, 1723, 2168
GluI GCNGC 6 cut(s) 758, 1171, 2302, 2355, 2374, 2740
GsaI CCCAGC 1 cut(s) 2438
GsuI CTGGAG 1 cut(s) 1853
HaeII RGCGCY 1 cut(s) 1397
HaeIII GGCC 7 cut(s) 675, 1018, 1059, 1367, 1932, 2191, 2752
HapII CCGG 2 cut(s) 1616, 1970
HhaI GCGC 4 cut(s) 1324, 1396, 1724, 2169
Hin1II CATG 8 cut(s) 321, 458, 1128, 1289, 1428, 1534, 1859, 2337
Hin6I GCGC 4 cut(s) 1322, 1394, 1722, 2167
HinP1I GCGC 4 cut(s) 1322, 1394, 1722, 2167
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 8 cut(s) 88, 369, 1093, 1188, 1759, 2462, 2632, 2758
HpaII CCGG 2 cut(s) 1616, 1970
HphI GGTGA 6 cut(s) 805, 1289, 1958, 2371, 2417, 2665
Hpy166II GTNNAC 4 cut(s) 152, 813, 1994, 2339
Hpy8I GTNNAC 4 cut(s) 152, 813, 1994, 2339
HpyAV CCTTC 9 cut(s) 58, 222, 1049, 1144, 1613, 1803, 2383, 2535, 2658
HpyCH4III ACNGT 4 cut(s) 810, 1718, 2006, 2367
HpyCH4IV ACGT 6 cut(s) 399, 469, 531, 553, 1029, 1811
HpyF10VI GCNNNNNNNGC 5 cut(s) 956, 1015, 1621, 2435, 2444
HpySE526I ACGT 6 cut(s) 399, 469, 531, 553, 1029, 1811
Hsp92II CATG 8 cut(s) 321, 458, 1128, 1289, 1428, 1534, 1859, 2337
HspAI GCGC 4 cut(s) 1322, 1394, 1722, 2167
Kpn2I TCCGGA 1 cut(s) 1969
KpnI GGTACC 1 cut(s) 2051
Ksp22I TGATCA 1 cut(s) 747
LmnI GCTCC 2 cut(s) 1435, 1477
Lsp1109I GCAGC 4 cut(s) 1157, 2313, 2366, 2385
LweI GCATC 8 cut(s) 429, 1733, 1837, 2087, 2366, 2416, 2606, 2714
MaeII ACGT 6 cut(s) 399, 469, 531, 553, 1029, 1811
MaeIII GTNAC 8 cut(s) 400, 424, 1128, 1181, 1313, 1454, 1823, 2361
MbiI CCGCTC 1 cut(s) 2739
MboII GAAGA 9 cut(s) 241, 731, 956, 985, 2099, 2108, 2201, 2636, 2729
MfeI CAATTG 3 cut(s) 81, 600, 2400
MflI RGATCY 3 cut(s) 1262, 1642, 2419
MhlI GDGCHC 3 cut(s) 1369, 1474, 2182
MlsI TGGCCA 1 cut(s) 2752
MluNI TGGCCA 1 cut(s) 2752
MlyI GAGTC 3 cut(s) 97, 1197, 2626
MmeI TCCRAC 2 cut(s) 310, 1087
Mox20I TGGCCA 1 cut(s) 2752
Mph1103I ATGCAT 1 cut(s) 2431
MroI TCCGGA 1 cut(s) 1969
MroXI GAANNNNTTC 3 cut(s) 9, 723, 2511
MscI TGGCCA 1 cut(s) 2752
Msp20I TGGCCA 1 cut(s) 2752
MspI CCGG 2 cut(s) 1616, 1970
MssI GTTTAAAC 1 cut(s) 888
MunI CAATTG 3 cut(s) 81, 600, 2400
Mva1269I GAATGC 2 cut(s) 53, 2429
MvnI CGCG 2 cut(s) 1324, 2169
MwoI GCNNNNNNNGC 5 cut(s) 956, 1015, 1621, 2435, 2444
NlaIII CATG 8 cut(s) 321, 458, 1128, 1289, 1428, 1534, 1859, 2337
NlaIV GGNNCC 3 cut(s) 861, 1367, 2049
NmuCI GTSAC 4 cut(s) 1181, 1454, 1823, 2361
NsbI TGCGCA 1 cut(s) 1723
NsiI ATGCAT 1 cut(s) 2431
NspI RCATGY 2 cut(s) 1534, 2337
PaeI GCATGC 1 cut(s) 1534
PaeR7I CTCGAG 2 cut(s) 1379, 1430
PceI AGGCCT 2 cut(s) 1059, 1932
PciI ACATGT 1 cut(s) 2333
PctI GAATGC 2 cut(s) 53, 2429
PdmI GAANNNNTTC 3 cut(s) 9, 723, 2511
PfeI GAWTC 5 cut(s) 369, 1093, 1759, 2462, 2758
PflFI GACNNNGTC 1 cut(s) 1187
PflMI CCANNNNNTGG 3 cut(s) 1030, 1199, 1943
PkrI GCNGC 6 cut(s) 759, 1172, 2303, 2356, 2375, 2741
Ple19I CGATCG 1 cut(s) 1700
PleI GAGTC 3 cut(s) 96, 1196, 2626
PmeI GTTTAAAC 1 cut(s) 888
PpsI GAGTC 3 cut(s) 96, 1196, 2626
Ppu21I YACGTR 1 cut(s) 554
PpuMI RGGWCCY 2 cut(s) 860, 2608
PscI ACATGT 1 cut(s) 2333
PshAI GACNNNNGTC 2 cut(s) 1662, 1965
PsiI TTATAA 1 cut(s) 684
Psp5II RGGWCCY 2 cut(s) 860, 2608
PspFI CCCAGC 1 cut(s) 2434
PspN4I GGNNCC 3 cut(s) 861, 1367, 2049
PspOMI GGGCCC 1 cut(s) 1365
PspPI GGNCC 5 cut(s) 860, 1365, 1366, 2189, 2608
PspPPI RGGWCCY 2 cut(s) 860, 2608
PspXI VCTCGAGB 1 cut(s) 1379
PstI CTGCAG 1 cut(s) 2375
PsuI RGATCY 3 cut(s) 1262, 1642, 2419
PsyI GACNNNGTC 1 cut(s) 1187
PvuI CGATCG 1 cut(s) 1700
RsaI GTAC 8 cut(s) 534, 1050, 1197, 1715, 1838, 2003, 2008, 2049
RsaNI GTAC 8 cut(s) 533, 1049, 1196, 1714, 1837, 2002, 2007, 2048
SatI GCNGC 6 cut(s) 758, 1171, 2302, 2355, 2374, 2740
Sau96I GGNCC 5 cut(s) 860, 1365, 1366, 2189, 2608
ScaI AGTACT 3 cut(s) 1197, 1715, 2003
SchI GAGTC 3 cut(s) 97, 1197, 2626
SduI GDGCHC 3 cut(s) 1369, 1474, 2182
SfaNI GCATC 8 cut(s) 429, 1733, 1837, 2087, 2366, 2416, 2606, 2714
SfcI CTRYAG 1 cut(s) 2371
Sfr274I CTCGAG 2 cut(s) 1379, 1430
SinI GGWCC 2 cut(s) 860, 2608
SlaI CTCGAG 2 cut(s) 1379, 1430
SmlI CTYRAG 7 cut(s) 521, 839, 1379, 1430, 1493, 2492, 2603
SmoI CTYRAG 7 cut(s) 521, 839, 1379, 1430, 1493, 2492, 2603
SpeI ACTAGT 1 cut(s) 157
SphI GCATGC 1 cut(s) 1534
SseBI AGGCCT 2 cut(s) 1059, 1932
SsiI CCGC 5 cut(s) 757, 1524, 2169, 2299, 2739
StuI AGGCCT 2 cut(s) 1059, 1932
StyI CCWWGG 2 cut(s) 1135, 2043
TaaI ACNGT 4 cut(s) 810, 1718, 2006, 2367
TaiI ACGT 6 cut(s) 402, 472, 534, 556, 1032, 1814
TatI WGTACW 5 cut(s) 1048, 1195, 1713, 1836, 2001
TauI GCSGC 2 cut(s) 760, 2742
TfiI GAWTC 5 cut(s) 369, 1093, 1759, 2462, 2758
TscAI CASTG 1 cut(s) 1673
TseFI GTSAC 4 cut(s) 1181, 1454, 1823, 2361
TseI GCWGC 4 cut(s) 1170, 2301, 2354, 2373
Tsp45I GTSAC 4 cut(s) 1181, 1454, 1823, 2361
TspDTI ATGAA 5 cut(s) 60, 213, 797, 1722, 2764
TspGWI ACGGA 2 cut(s) 1200, 2138
TspRI CASTG 1 cut(s) 1673
Tth111I GACNNNGTC 1 cut(s) 1187
Van91I CCANNNNNTGG 3 cut(s) 1030, 1199, 1943
VpaK11BI GGWCC 2 cut(s) 860, 2608
XapI RAATTY 8 cut(s) 169, 562, 742, 1082, 1115, 2195, 2256, 2511
XbaI TCTAGA 1 cut(s) 2260
XceI RCATGY 2 cut(s) 1534, 2337
XhoI CTCGAG 2 cut(s) 1379, 1430
XmaJI CCTAGG 1 cut(s) 1135
XmiI GTMKAC 2 cut(s) 151, 2338
XmnI GAANNNNTTC 3 cut(s) 9, 723, 2511
ZrmI AGTACT 3 cut(s) 1197, 1715, 2003
Zsp2I ATGCAT 1 cut(s) 2431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.