FvH4_4g18270

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
22217190 .. 22222978
5789 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g18270.t1

Sequence Viewer

Length: 2895 bp
ATGGAAACTCTTCCTAGATGTGATTTGGGAAAATTATCAGATGATGAATGCTGGCTCATAATGAAGGATAAAGCCATTCCAGTTGGGAGTCCTCCTATATCTAAAGAGCAGGAGACTATTGGTAGAGAGATCGCTAAAAGATGTGGAGGTGTACCACTAGTGGCAAAGGTTTTGGGAGGTGTGATGCGCTCCAATACAATTGATAATTGGCGATCAATTTTAAAAAGTAAAACCTGGGATTCAGAAGGAGAAAAGAGAATAGTTTCGATTTTGAAGCTGAGTTTTGATGAATTGAAGCCTCCTTCATTAAAACAATGTTTTGCATATTGTTCGATGTTCCCCAAAGATTTTGATTTTGAAAAGAATGACTTGATCCAACTTTGGATGGCTCAGGGATGGCTTCACCCTTGTTCTGAGAAAATCCTAGAGATGGAGCAGAGAGGTAATGAATATTTCAATATCCTCTTGGCTAAGTCTTTTTTTCAAGACGTTACAAAGGATTATGGTGGTAATGTTACCAAATGTAAGATGCATGATCTTGTGCATGATCTCGCAGAACATGTATCAAAATCAAGGAACTTACGCTCACTTTTTTCACACGGAGAAGCCCTTGAGAGCAACTTACTTAACTTTAAATTGCTACGTGTGTTAAATTTATACAAAGCAGACATTGTAGAGTTGCCAATATCAATTGGGAAGTTGAAACACTTGAGGTATTTAAATGTTTTGAAAACAAGAATCAAAACATTTCCCAAATCAATTGGTCAGCTTTATAATCTGCAAACCTTGAAAATTCCTTATCAGCTTGAAGAATTTCCAACGGAAGTTGCAAATTTGATCAACCTGCGGCACATTTATTTTGGTAGATATATGAAAGTTCCTGGTGGGATATTGGGACAGCTGACCAATCTCCGGTCATTACCCTTTCTCAAGGTGGGTAACGAGACAGGTCCTGGAATTGAGGAATTGGGTTGTTTGAACCAGTTGCATGACACCTTGTCTATATATGGACTGGAAAATGTGGTAGATGGAGAAAAAGCCCTGAAAGCAAACTTATCGGAGAAGAAACATATACGCAAGTTAATCCTTGGTTGGAAGCTTATTAGGCCAAGCCACAATGTCGCGAATGATGTTGATGTACTAGAAGGCCTCCGGCCACATTCTACTTTGGAATATCTACAGATTCAGGGATTCATGGGTGGTAAACATCCATCATGGTTATTGCTAGCCCACAATTTGAAAGAGATTGAATTTTTGGGCTGCAACAAATGTGAAGCACTCCCAACACTCGGTCATTTGCCCAATCTTAGTTGTCTTAAGATAAGTGGAATGGAGAACCTAACTCGTATAGGATCTGAGTTCTATGGTGATGACCATGTCAATTGGGGAAATGGAACAATTGAGCAGGCGCGGCCTTTGTTCCCAGCTCTGAAAAAATTGCATATTGAGGAGTCCCCGAACCTGATTGAATGGATGGAAGCGCCAATTGAGAGAGCAAATTGGGTGTTTCCTTGCCTTGAGGAGCTGACCTTGATTAAATGTAACAGACTGACAAGTGCTCCTAGTCATTTCCCATCCCTCAAGAAGTTAGATATACAATGCATGGATAGCGGAGGCATGCCAATAGCAAGTATTCTAAGCAATAAACTCACCACTCTCACTGATCTCAACTTATTTAAAGTGGGGAGACTTACTTGTCTGCCGGAAGGAATGTTAGAAAGCAACAAGAATCTTGCACATTTAAACATAGTGCAGTGTCGAGAGTTAACTTGTATTTCTCCCCAATCACAAGGATTTGCTTACTGCTGTGCATCTCTTTCATATTTGCGGCTATATATTTGTGACAATCTCAGATATTTACCTGATGGGATACTCACTCCTTCTCTTAAAGAGATGACGTTGTATGCTTGTGAGAATCTAGAGTACATCCCAGATGCTACACACGGTGGTCTCACATCCCTGGAAAGGTTGTCTTTGTCAATGTGCTATAAAATAACTTCCATTCCATTCTCACAAGGCCTGCCATCTCTTCGTAAATTGGACATAGACCAGTGTCCGGAACTATCAAGCCTACCGGGTGGACTAGAATACTGTACCTCTCTTCGGAGTTTGAAAATAGCAGCTTGCCCCAAGGTACCATCCGTTTTAATCGGAAGTCTGAGTGCATCCCTCAAATACTTGTGTGTAAGTAATGTAGACGCTCTTCCAATTTCACGAGGAGGCTTCACATCACTCCGTGAATTGAAAATCCTATATTGCGAAAGTTCCCAAATTGGGCCAGAATTTAGTGCCTTTCTTCAAAACCTTGTCTCGCTTCAAACATTGACGATTATGTGTTGCGAAAATCTAGAGAGTATTCCAAGTTCAGACAAGCTCACATCCCTCCGCAGTTTGGTGATTATGCGGTGTTATAAATTAACAAGTCTGCCAAAGGGGTTAGCAGCATCGTCACAGCCCTGCAGCCTCACCCATTTGAAGGAATTGAGAATTGGTGGTTTCTGCGAGGAGCTCGATGCATTCCCAGCTTTTCAGGCAATACCACAACTTGAAACATTAGAACTGGAAGGGTGGAATAAGCTCAAGTCTCTCCCTGAACAAACTCAACACTTGCCTTCTTTAAGACATTTGGAGATAGAATCCTTTAACGGAGTGGATGCAATTCCAGAGTGGTTGGGAAACCTTGCGTCTCTCGAGGACCTGTCTGTTTGGGGTTGCGAGAGTCTAAAGTATCTGCCTTCTGTGGAAGCAATGCAACGCCTCACCAAATTGAAAGAGATAAAGATCTCCTTCTGTCCCCTTCTAGAAGAAAGATGCACGGAGGAGACTGGCCCTGAGTGGCCTAAGATTCGTCATCTTCCATTCATCACGATTGATGATAAAACTATCAAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

965

Amino Acids

108.37

Weight (kDa)

6.66

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 112 - 185 2.8e-25 Disease resistance protein Winged helix domain
LRR_14 PF23598 194 - 483 5.1e-31 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 320 - 444 1.7e-33 R13L1/DRL21 LRRs
LRR_14 PF23598 637 - 830 2.1e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 792 - 931 8.9e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 821 - 940 1.2e-10 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 868 - 924 2.7e-07 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 774, 2412
AasI GACNNNNNNGTC 1 cut(s) 1695
Acc36I ACCTGC 1 cut(s) 852
Acc65I GGTACC 1 cut(s) 2134
AccB1I GGYRCC 1 cut(s) 2134
AccI GTMKAC 1 cut(s) 2196
AccII CGCG 2 cut(s) 1124, 1411
AccIII TCCGGA 1 cut(s) 2056
AciI CCGC 6 cut(s) 847, 1411, 1611, 1828, 2386, 2404
AclWI GGATC 2 cut(s) 367, 1360
AcoI YGGCCR 1 cut(s) 1154
AcsI RAATTY 6 cut(s) 652, 792, 812, 832, 1250, 2282
AdeI CACNNNGTG 2 cut(s) 1946, 2237
AfaI GTAC 5 cut(s) 153, 1140, 1925, 2095, 2136
AfiI CCNNNNNNNGG 9 cut(s) 430, 912, 1289, 1965, 2056, 2103, 2274, 2392, 2476
AflII CTTAAG 1 cut(s) 1316
AflIII ACRYGT 2 cut(s) 559, 643
AhdI GACNNNNNGTC 1 cut(s) 997
AhlI ACTAGT 1 cut(s) 157
AjnI CCWGG 4 cut(s) 233, 880, 952, 1959
AjuI GAANNNNNNNTTGG 2 cut(s) 2472, 2504
Alw21I GWGCWC 2 cut(s) 1561, 2511
Alw26I GTCTC 8 cut(s) 107, 938, 1681, 1955, 2314, 2589, 2691, 2816
AlwI GGATC 2 cut(s) 367, 1360
AlwNI CAGNNNCTG 1 cut(s) 953
Ama87I CYCGRG 1 cut(s) 2690
Aor13HI TCCGGA 1 cut(s) 2056
AoxI GGCC 8 cut(s) 1106, 1147, 1154, 1412, 2017, 2276, 2827, 2837
ApeKI GCWGC 4 cut(s) 1260, 2120, 2441, 2460
ApoI RAATTY 6 cut(s) 652, 792, 812, 832, 1250, 2282
Asp700I GAANNNNTTC 3 cut(s) 9, 262, 813
Asp718I GGTACC 1 cut(s) 2134
AspLEI GCGC 3 cut(s) 189, 1411, 1483
AspS9I GGNCC 4 cut(s) 950, 2276, 2695, 2828
AsuC2I CCSGG 1 cut(s) 2076
AsuHPI GGTGA 6 cut(s) 395, 1379, 1642, 2407, 2458, 2752
AsuNHI GCTAGC 1 cut(s) 1225
AvaI CYCGRG 1 cut(s) 2690
AvaII GGWCC 2 cut(s) 950, 2695
BanI GGYRCC 1 cut(s) 2134
BanII GRGCYC 1 cut(s) 2511
BarI GAAGNNNNNNTAC 2 cut(s) 2187, 2219
BauI CACGAG 1 cut(s) 2214
Bbv12I GWGCWC 2 cut(s) 1561, 2511
BbvI GCAGC 4 cut(s) 1247, 2132, 2453, 2472
BcgI CGANNNNNNTGC 4 cut(s) 312, 346, 1038, 1072
BciT130I CCWGG 4 cut(s) 235, 882, 954, 1961
BciVI GTATCC 1 cut(s) 1863
BclI TGATCA 1 cut(s) 837
BcnI CCSGG 1 cut(s) 2076
BcoDI GTCTC 8 cut(s) 107, 938, 1681, 1955, 2314, 2589, 2691, 2816
BcuI ACTAGT 1 cut(s) 157
BfmI CTRYAG 2 cut(s) 1178, 2458
BfoI RGCGCY 1 cut(s) 1484
BfrI CTTAAG 1 cut(s) 1316
BfuAI ACCTGC 1 cut(s) 852
BfuI GTATCC 1 cut(s) 1863
BglII AGATCT 1 cut(s) 2781
BisI GCNGC 7 cut(s) 848, 1261, 1412, 1829, 2121, 2442, 2461
BlsI GCNGC 7 cut(s) 849, 1262, 1413, 1830, 2122, 2443, 2462
Bme1390I CCNGG 5 cut(s) 235, 882, 954, 1961, 2076
Bme18I GGWCC 2 cut(s) 950, 2695
BmeRI GACNNNNNGTC 1 cut(s) 997
BmeT110I CYCGRG 1 cut(s) 2690
BmgT120I GGNCC 4 cut(s) 950, 2276, 2695, 2828
BmiI GGNNCC 1 cut(s) 2136
BmrFI CCNGG 5 cut(s) 235, 882, 954, 1961, 2076
BmsI GCATC 9 cut(s) 174, 519, 1820, 1924, 2174, 2453, 2503, 2644, 2801
BmtI GCTAGC 1 cut(s) 1229
BoxI GACNNNNGTC 1 cut(s) 2052
Bpu10I CCTNAGC 1 cut(s) 390
BpuEI CTTGAG 6 cut(s) 632, 730, 914, 1538, 1565, 2564
BpuMI CCSGG 1 cut(s) 2076
BsaAI YACGTR 1 cut(s) 644
BsaBI GATNNNNATC 1 cut(s) 2780
BsaI GGTCTC 1 cut(s) 1955
BsaJI CCNNGG 4 cut(s) 234, 1087, 1959, 2130
BsaWI WCCGGW 2 cut(s) 912, 2056
BsaXI ACNNNNNCTCC 2 cut(s) 1543, 1573
Bsc4I CCNNNNNNNGG 9 cut(s) 430, 912, 1289, 1965, 2056, 2103, 2274, 2392, 2476
Bse1I ACTGG 6 cut(s) 80, 982, 1017, 2050, 2565, 2830
Bse3DI GCAATG 1 cut(s) 2754
Bse8I GATNNNNATC 1 cut(s) 2780
BseAI TCCGGA 1 cut(s) 2056
BseBI CCWGG 4 cut(s) 235, 882, 954, 1961
BseDI CCNNGG 4 cut(s) 234, 1087, 1959, 2130
BseJI GATNNNNATC 1 cut(s) 2780
BseLI CCNNNNNNNGG 9 cut(s) 430, 912, 1289, 1965, 2056, 2103, 2274, 2392, 2476
BseMI GCAATG 1 cut(s) 2754
BseMII CTCAG 7 cut(s) 269, 404, 405, 1347, 1864, 2150, 2823
BseNI ACTGG 6 cut(s) 80, 982, 1017, 2050, 2565, 2830
BseRI GAGGAG 5 cut(s) 1463, 1535, 2232, 2519, 2834
BseXI GCAGC 4 cut(s) 1247, 2132, 2453, 2472
BseYI CCCAGC 2 cut(s) 1423, 2521
BsgI GTGCAG 1 cut(s) 1772
Bsh1236I CGCG 2 cut(s) 1124, 1411
BshFI GGCC 8 cut(s) 1108, 1149, 1156, 1414, 2019, 2278, 2829, 2839
BshNI GGYRCC 1 cut(s) 2134
BsiHKAI GWGCWC 2 cut(s) 1561, 2511
BsiHKCI CYCGRG 1 cut(s) 2690
BsiSI CCGG 5 cut(s) 913, 1153, 1703, 2057, 2075
BslFI GGGAC 3 cut(s) 909, 1438, 2778
BslI CCNNNNNNNGG 9 cut(s) 430, 912, 1289, 1965, 2056, 2103, 2274, 2392, 2476
BsmAI GTCTC 8 cut(s) 107, 938, 1681, 1955, 2314, 2589, 2691, 2816
BsmBI CGTCTC 1 cut(s) 2691
BsmFI GGGAC 3 cut(s) 909, 1438, 2778
BsmI GAATGC 2 cut(s) 53, 2516
BsnI GGCC 8 cut(s) 1108, 1149, 1156, 1414, 2019, 2278, 2829, 2839
Bso31I GGTCTC 1 cut(s) 1955
BsoBI CYCGRG 1 cut(s) 2690
Bsp1286I GDGCHC 2 cut(s) 1561, 2511
Bsp13I TCCGGA 1 cut(s) 2056
Bsp143I GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
Bsp68I TCGCGA 1 cut(s) 1124
BspACI CCGC 6 cut(s) 847, 1411, 1611, 1828, 2386, 2404
BspANI GGCC 8 cut(s) 1108, 1149, 1156, 1414, 2019, 2278, 2829, 2839
BspCNI CTCAG 7 cut(s) 270, 403, 406, 1348, 1863, 2151, 2824
BspEI TCCGGA 1 cut(s) 2056
BspFNI CGCG 2 cut(s) 1124, 1411
BspLI GGNNCC 1 cut(s) 2136
BspMAI CTGCAG 1 cut(s) 2462
BspMI ACCTGC 1 cut(s) 852
BspOI GCTAGC 1 cut(s) 1229
BspPI GGATC 2 cut(s) 367, 1360
BspQI GCTCTTC 1 cut(s) 2208
BspT107I GGYRCC 1 cut(s) 2134
BspTI CTTAAG 1 cut(s) 1316
BspTNI GGTCTC 1 cut(s) 1955
BsrDI GCAATG 1 cut(s) 2754
BsrI ACTGG 6 cut(s) 80, 982, 1017, 2050, 2565, 2830
BssECI CCNNGG 4 cut(s) 234, 1087, 1959, 2130
BssMI GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
BssSI CACGAG 1 cut(s) 2214
BssT1I CCWWGG 2 cut(s) 1087, 2130
Bst2BI CACGAG 1 cut(s) 2214
Bst2UI CCWGG 4 cut(s) 235, 882, 954, 1961
Bst4CI ACNGT 2 cut(s) 1946, 2093
Bst6I CTCTTC 4 cut(s) 15, 2034, 2106, 2208
BstAFI CTTAAG 1 cut(s) 1316
BstBAI YACGTR 1 cut(s) 644
BstC8I GCNNGC 6 cut(s) 53, 1227, 1407, 1619, 2021, 2125
BstFNI CGCG 2 cut(s) 1124, 1411
BstH2I RGCGCY 1 cut(s) 1484
BstHHI GCGC 3 cut(s) 189, 1411, 1483
BstKTI GATC 9 cut(s) 132, 215, 375, 538, 550, 840, 1355, 1666, 2784
BstMAI GTCTC 8 cut(s) 107, 938, 1681, 1955, 2314, 2589, 2691, 2816
BstMBI GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
BstMWI GCNNNNNNNGC 6 cut(s) 1046, 1105, 1411, 1608, 2522, 2531
BstNI CCWGG 4 cut(s) 235, 882, 954, 1961
BstNSI RCATGY 2 cut(s) 563, 1621
BstPAI GACNNNNGTC 1 cut(s) 2052
BstSCI CCNGG 5 cut(s) 233, 880, 952, 1959, 2074
BstSFI CTRYAG 2 cut(s) 1178, 2458
BstUI CGCG 2 cut(s) 1124, 1411
BstV1I GCAGC 4 cut(s) 1247, 2132, 2453, 2472
BstX2I RGATCY 2 cut(s) 1352, 2781
BstYI RGATCY 2 cut(s) 1352, 2781
BsuI GTATCC 1 cut(s) 1863
BsuRI GGCC 8 cut(s) 1108, 1149, 1156, 1414, 2019, 2278, 2829, 2839
BtsI GCAGTG 1 cut(s) 1760
BtsIMutI CAGTG 3 cut(s) 1659, 1760, 2057
BtuMI TCGCGA 1 cut(s) 1124
BveI ACCTGC 1 cut(s) 852
Cac8I GCNNGC 6 cut(s) 53, 1227, 1407, 1619, 2021, 2125
CaiI CAGNNNCTG 1 cut(s) 953
CfoI GCGC 3 cut(s) 189, 1411, 1483
Cfr13I GGNCC 4 cut(s) 950, 2276, 2695, 2828
CseI GACGC 2 cut(s) 2207, 2673
Csp6I GTAC 5 cut(s) 152, 1139, 1924, 2094, 2135
CviAII CATG 9 cut(s) 533, 545, 560, 989, 1195, 1215, 1376, 1603, 1618
CviQI GTAC 5 cut(s) 152, 1139, 1924, 2094, 2135
DpnI GATC 9 cut(s) 131, 214, 374, 537, 549, 839, 1354, 1665, 2783
DpnII GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
DraI TTTAAA 5 cut(s) 222, 634, 720, 1678, 1743
DraIII CACNNNGTG 2 cut(s) 1946, 2237
DrdI GACNNNNNNGTC 1 cut(s) 1695
DriI GACNNNNNGTC 1 cut(s) 997
DseDI GACNNNNNNGTC 1 cut(s) 1695
EaeI YGGCCR 1 cut(s) 1154
Eam1104I CTCTTC 4 cut(s) 15, 2034, 2106, 2208
Eam1105I GACNNNNNGTC 1 cut(s) 997
EarI CTCTTC 4 cut(s) 15, 2034, 2106, 2208
Ecl136II GAGCTC 1 cut(s) 2509
Eco130I CCWWGG 2 cut(s) 1087, 2130
Eco147I AGGCCT 2 cut(s) 1149, 2019
Eco24I GRGCYC 1 cut(s) 2511
Eco31I GGTCTC 1 cut(s) 1955
Eco47I GGWCC 2 cut(s) 950, 2695
Eco53kI GAGCTC 1 cut(s) 2509
Eco88I CYCGRG 1 cut(s) 2690
EcoICRI GAGCTC 1 cut(s) 2509
EcoO109I RGGNCCY 2 cut(s) 950, 2695
EcoRII CCWGG 4 cut(s) 233, 880, 952, 1959
EcoT14I CCWWGG 2 cut(s) 1087, 2130
EcoT22I ATGCAT 3 cut(s) 534, 1604, 2518
EcoT38I GRGCYC 1 cut(s) 2511
ErhI CCWWGG 2 cut(s) 1087, 2130
Esp3I CGTCTC 1 cut(s) 2691
FaeI CATG 9 cut(s) 536, 548, 563, 992, 1198, 1218, 1379, 1606, 1621
FalI AAGNNNNNCTT 6 cut(s) 353, 385, 1957, 1989, 2771, 2803
FaqI GGGAC 3 cut(s) 909, 1438, 2778
FatI CATG 9 cut(s) 532, 544, 559, 988, 1194, 1214, 1375, 1602, 1617
FbaI TGATCA 1 cut(s) 837
FblI GTMKAC 1 cut(s) 2196
Fnu4HI GCNGC 7 cut(s) 848, 1261, 1412, 1829, 2121, 2442, 2461
FriOI GRGCYC 1 cut(s) 2511
Fsp4HI GCNGC 7 cut(s) 848, 1261, 1412, 1829, 2121, 2442, 2461
GlaI GCGC 3 cut(s) 188, 1410, 1482
GluI GCNGC 7 cut(s) 848, 1261, 1412, 1829, 2121, 2442, 2461
GsaI CCCAGC 2 cut(s) 1427, 2525
HaeII RGCGCY 1 cut(s) 1484
HaeIII GGCC 8 cut(s) 1108, 1149, 1156, 1414, 2019, 2278, 2829, 2839
HapII CCGG 5 cut(s) 913, 1153, 1703, 2057, 2075
HgaI GACGC 2 cut(s) 2207, 2673
HhaI GCGC 3 cut(s) 189, 1411, 1483
Hin1II CATG 9 cut(s) 536, 548, 563, 992, 1198, 1218, 1379, 1606, 1621
Hin6I GCGC 3 cut(s) 187, 1409, 1481
HinP1I GCGC 3 cut(s) 187, 1409, 1481
HincII GTYRAC 1 cut(s) 1767
HindII GTYRAC 1 cut(s) 1767
HindIII AAGCTT 1 cut(s) 1097
HpaI GTTAAC 1 cut(s) 1767
HpaII CCGG 5 cut(s) 913, 1153, 1703, 2057, 2075
HphI GGTGA 6 cut(s) 395, 1379, 1642, 2407, 2458, 2752
Hpy166II GTNNAC 5 cut(s) 152, 1205, 1767, 2081, 2197
Hpy8I GTNNAC 5 cut(s) 152, 1205, 1767, 2081, 2197
HpyCH4III ACNGT 2 cut(s) 1946, 2093
HpyCH4IV ACGT 3 cut(s) 489, 643, 1898
HpyF10VI GCNNNNNNNGC 6 cut(s) 1046, 1105, 1411, 1608, 2522, 2531
HpySE526I ACGT 3 cut(s) 489, 643, 1898
Hsp92II CATG 9 cut(s) 536, 548, 563, 992, 1198, 1218, 1379, 1606, 1621
HspAI GCGC 3 cut(s) 187, 1409, 1481
Kpn2I TCCGGA 1 cut(s) 2056
KpnI GGTACC 1 cut(s) 2138
Ksp22I TGATCA 1 cut(s) 837
KspAI GTTAAC 1 cut(s) 1767
Kzo9I GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
LguI GCTCTTC 1 cut(s) 2208
LmnI GCTCC 5 cut(s) 194, 433, 1522, 1564, 2506
Lsp1109I GCAGC 4 cut(s) 1247, 2132, 2453, 2472
LweI GCATC 9 cut(s) 174, 519, 1820, 1924, 2174, 2453, 2503, 2644, 2801
MaeII ACGT 3 cut(s) 489, 643, 1898
MaeIII GTNAC 6 cut(s) 490, 514, 938, 1541, 1841, 2448
MalI GATC 9 cut(s) 131, 214, 374, 537, 549, 839, 1354, 1665, 2783
MboI GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
MboII GAAGA 8 cut(s) 821, 1075, 2021, 2093, 2195, 2288, 2816, 2846
MfeI CAATTG 6 cut(s) 198, 690, 759, 1381, 1398, 1485
MflI RGATCY 2 cut(s) 1352, 2781
MhlI GDGCHC 2 cut(s) 1561, 2511
MlyI GAGTC 3 cut(s) 97, 1460, 2728
MmeI TCCRAC 3 cut(s) 400, 842, 1073
Mph1103I ATGCAT 3 cut(s) 534, 1604, 2518
MroI TCCGGA 1 cut(s) 2056
MroXI GAANNNNTTC 3 cut(s) 9, 262, 813
MspA1I CMGCKG 1 cut(s) 901
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 5 cut(s) 913, 1153, 1703, 2057, 2075
MspR9I CCNGG 5 cut(s) 235, 882, 954, 1961, 2076
MunI CAATTG 6 cut(s) 198, 690, 759, 1381, 1398, 1485
Mva1269I GAATGC 2 cut(s) 53, 2516
MvaI CCWGG 4 cut(s) 235, 882, 954, 1961
MvnI CGCG 2 cut(s) 1124, 1411
MwoI GCNNNNNNNGC 6 cut(s) 1046, 1105, 1411, 1608, 2522, 2531
NciI CCSGG 1 cut(s) 2076
NdeII GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
NheI GCTAGC 1 cut(s) 1225
NlaIII CATG 9 cut(s) 536, 548, 563, 992, 1198, 1218, 1379, 1606, 1621
NlaIV GGNNCC 1 cut(s) 2136
NmuCI GTSAC 2 cut(s) 1841, 2448
NruI TCGCGA 1 cut(s) 1124
NsiI ATGCAT 3 cut(s) 534, 1604, 2518
NspI RCATGY 2 cut(s) 563, 1621
PaeI GCATGC 1 cut(s) 1621
PaeR7I CTCGAG 1 cut(s) 2690
PceI AGGCCT 2 cut(s) 1149, 2019
PciI ACATGT 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 2208
PctI GAATGC 2 cut(s) 53, 2516
PdmI GAANNNNTTC 3 cut(s) 9, 262, 813
PfeI GAWTC 8 cut(s) 239, 738, 1183, 1191, 1729, 1915, 2636, 2845
PflFI GACNNNGTC 1 cut(s) 1376
PfoI TCCNGGA 1 cut(s) 952
PkrI GCNGC 7 cut(s) 849, 1262, 1413, 1830, 2122, 2443, 2462
PleI GAGTC 3 cut(s) 96, 1459, 2727
PpsI GAGTC 3 cut(s) 96, 1459, 2727
Ppu21I YACGTR 1 cut(s) 644
PpuMI RGGWCCY 2 cut(s) 950, 2695
PscI ACATGT 1 cut(s) 559
PshAI GACNNNNGTC 1 cut(s) 2052
PsiI TTATAA 2 cut(s) 774, 2412
Psp124BI GAGCTC 1 cut(s) 2511
Psp5II RGGWCCY 2 cut(s) 950, 2695
Psp6I CCWGG 4 cut(s) 233, 880, 952, 1959
PspFI CCCAGC 2 cut(s) 1423, 2521
PspGI CCWGG 4 cut(s) 233, 880, 952, 1959
PspN4I GGNNCC 1 cut(s) 2136
PspPI GGNCC 4 cut(s) 950, 2276, 2695, 2828
PspPPI RGGWCCY 2 cut(s) 950, 2695
PsrI GAACNNNNNNTAC 2 cut(s) 2347, 2379
PstI CTGCAG 1 cut(s) 2462
PstNI CAGNNNCTG 1 cut(s) 953
PsuI RGATCY 2 cut(s) 1352, 2781
PsyI GACNNNGTC 1 cut(s) 1376
PvuII CAGCTG 1 cut(s) 901
RruI TCGCGA 1 cut(s) 1124
RsaI GTAC 5 cut(s) 153, 1140, 1925, 2095, 2136
RsaNI GTAC 5 cut(s) 152, 1139, 1924, 2094, 2135
SacI GAGCTC 1 cut(s) 2511
SapI GCTCTTC 1 cut(s) 2208
SatI GCNGC 7 cut(s) 848, 1261, 1412, 1829, 2121, 2442, 2461
Sau3AI GATC 9 cut(s) 129, 212, 372, 535, 547, 837, 1352, 1663, 2781
Sau96I GGNCC 4 cut(s) 950, 2276, 2695, 2828
SchI GAGTC 3 cut(s) 97, 1460, 2728
ScrFI CCNGG 5 cut(s) 235, 882, 954, 1961, 2076
SduI GDGCHC 2 cut(s) 1561, 2511
SfaNI GCATC 9 cut(s) 174, 519, 1820, 1924, 2174, 2453, 2503, 2644, 2801
SfcI CTRYAG 2 cut(s) 1178, 2458
Sfr274I CTCGAG 1 cut(s) 2690
SinI GGWCC 2 cut(s) 950, 2695
SlaI CTCGAG 1 cut(s) 2690
SmiI ATTTAAAT 1 cut(s) 720
SmlI CTYRAG 8 cut(s) 611, 709, 929, 1316, 1517, 1580, 2579, 2690
SmoI CTYRAG 8 cut(s) 611, 709, 929, 1316, 1517, 1580, 2579, 2690
SpeI ACTAGT 1 cut(s) 157
SphI GCATGC 1 cut(s) 1621
SseBI AGGCCT 2 cut(s) 1149, 2019
SsiI CCGC 6 cut(s) 847, 1411, 1611, 1828, 2386, 2404
SspI AATATT 1 cut(s) 452
SstI GAGCTC 1 cut(s) 2511
StuI AGGCCT 2 cut(s) 1149, 2019
StyD4I CCNGG 5 cut(s) 233, 880, 952, 1959, 2074
StyI CCWWGG 2 cut(s) 1087, 2130
SwaI ATTTAAAT 1 cut(s) 720
TaaI ACNGT 2 cut(s) 1946, 2093
TaiI ACGT 3 cut(s) 492, 646, 1901
TaqI TCGA 5 cut(s) 266, 332, 1759, 2511, 2691
TaqII GACCGA 1 cut(s) 1280
TatI WGTACW 2 cut(s) 1138, 1923
TauI GCSGC 3 cut(s) 850, 1414, 1831
TfiI GAWTC 8 cut(s) 239, 738, 1183, 1191, 1729, 1915, 2636, 2845
TscAI CASTG 3 cut(s) 1666, 1760, 2057
TseFI GTSAC 2 cut(s) 1841, 2448
TseI GCWGC 4 cut(s) 1260, 2120, 2441, 2460
Tsp45I GTSAC 2 cut(s) 1841, 2448
TspDTI ATGAA 9 cut(s) 60, 77, 294, 303, 462, 887, 1183, 1809, 2851
TspGWI ACGGA 6 cut(s) 615, 836, 2131, 2225, 2661, 2831
TspRI CASTG 3 cut(s) 1666, 1760, 2057
Tth111I GACNNNGTC 1 cut(s) 1376
Vha464I CTTAAG 1 cut(s) 1316
VpaK11BI GGWCC 2 cut(s) 950, 2695
XapI RAATTY 6 cut(s) 652, 792, 812, 832, 1250, 2282
XbaI TCTAGA 3 cut(s) 1918, 2347, 2800
XceI RCATGY 2 cut(s) 563, 1621
XhoI CTCGAG 1 cut(s) 2690
XmiI GTMKAC 1 cut(s) 2196
XmnI GAANNNNTTC 3 cut(s) 9, 262, 813
Zsp2I ATGCAT 3 cut(s) 534, 1604, 2518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.