disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 14 - 97 | 4.5e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 175 - 349 | 1.8e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 429 - 502 | 1.5e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 545 - 800 | 4.8e-30 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 673 - 800 | 1.8e-34 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 983 - 1149 | 1.4e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 1113 - 1202 | 2.2e-07 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1135 - 1194 | 1.6e-06 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 714 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2659 |
| AccBSI | CCGCTC | 1 cut(s) | 2356 |
| AccII | CGCG | 2 cut(s) | 358, 1704 |
| AccIII | TCCGGA | 1 cut(s) | 3014 |
| AciI | CCGC | 7 cut(s) | 32, 584, 1127, 1639, 2354, 2394, 3639 |
| AclWI | GGATC | 5 cut(s) | 399, 912, 925, 1061, 3349 |
| AcoI | YGGCCR | 4 cut(s) | 591, 630, 2359, 3315 |
| AcsI | RAATTY | 9 cut(s) | 245, 363, 1305, 1410, 1711, 1937, 2696, 3226, 3408 |
| AcuI | CTGAAG | 3 cut(s) | 240, 1122, 1823 |
| AcyI | GRCGYC | 1 cut(s) | 711 |
| AdeI | CACNNNGTG | 1 cut(s) | 3648 |
| AfaI | GTAC | 8 cut(s) | 254, 797, 827, 837, 1933, 2199, 2904, 3002 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 456, 1364, 2357, 2659, 2710, 3029, 3214 |
| AflII | CTTAAG | 3 cut(s) | 2236, 2384, 2996 |
| AflIII | ACRYGT | 3 cut(s) | 1576, 1702, 2955 |
| AhlI | ACTAGT | 1 cut(s) | 421 |
| AjnI | CCWGG | 5 cut(s) | 431, 1363, 2632, 3181, 3585 |
| Alw21I | GWGCWC | 3 cut(s) | 1157, 1497, 2079 |
| Alw26I | GTCTC | 4 cut(s) | 1533, 2468, 3272, 3458 |
| Alw44I | GTGCAC | 1 cut(s) | 1493 |
| AlwI | GGATC | 5 cut(s) | 399, 912, 925, 1061, 3349 |
| Ama87I | CYCGRG | 2 cut(s) | 2588, 3137 |
| Aor13HI | TCCGGA | 1 cut(s) | 3014 |
| AoxI | GGCC | 7 cut(s) | 591, 610, 630, 2206, 2359, 3315, 3380 |
| ApaLI | GTGCAC | 1 cut(s) | 1493 |
| ApeKI | GCWGC | 2 cut(s) | 29, 3114 |
| ApoI | RAATTY | 9 cut(s) | 245, 363, 1305, 1410, 1711, 1937, 2696, 3226, 3408 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 915, 947 |
| AseI | ATTAAT | 2 cut(s) | 2528, 3081 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 74, 1000, 1611, 1737, 1875, 2611, 3408 |
| AspLEI | GCGC | 2 cut(s) | 358, 2464 |
| AspS9I | GGNCC | 1 cut(s) | 1020 |
| AsuHPI | GGTGA | 9 cut(s) | 64, 121, 208, 413, 1242, 1353, 2674, 2725, 3562 |
| AsuII | TTCGAA | 3 cut(s) | 109, 672, 1972 |
| AvaI | CYCGRG | 2 cut(s) | 2588, 3137 |
| AvaII | GGWCC | 1 cut(s) | 1020 |
| AxyI | CCTNAGG | 1 cut(s) | 1907 |
| BaeGI | GKGCMC | 1 cut(s) | 1497 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 650, 683 |
| BalI | TGGCCA | 3 cut(s) | 593, 632, 3317 |
| BamHI | GGATCC | 1 cut(s) | 917 |
| BauI | CACGAG | 1 cut(s) | 1584 |
| BbsI | GAAGAC | 2 cut(s) | 338, 1110 |
| Bbv12I | GWGCWC | 3 cut(s) | 1157, 1497, 2079 |
| BbvCI | CCTCAGC | 1 cut(s) | 228 |
| BbvI | GCAGC | 2 cut(s) | 16, 3126 |
| BccI | CCATC | 6 cut(s) | 186, 1031, 1261, 1330, 2278, 2370 |
| BceAI | ACGGC | 1 cut(s) | 2742 |
| BciT130I | CCWGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| BciVI | GTATCC | 1 cut(s) | 706 |
| BclI | TGATCA | 1 cut(s) | 1899 |
| BcoDI | GTCTC | 4 cut(s) | 1533, 2468, 3272, 3458 |
| BcuI | ACTAGT | 1 cut(s) | 421 |
| BfaI | CTAG | 8 cut(s) | 422, 1604, 2673, 2724, 2978, 3024, 3029, 3273 |
| BfmI | CTRYAG | 2 cut(s) | 2518, 3260 |
| BfrI | CTTAAG | 3 cut(s) | 2236, 2384, 2996 |
| BfuI | GTATCC | 1 cut(s) | 706 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2974, 3256 |
| BisI | GCNGC | 4 cut(s) | 30, 1128, 3115, 3640 |
| BlsI | GCNGC | 4 cut(s) | 31, 1129, 3116, 3641 |
| Bme1390I | CCNGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| Bme18I | GGWCC | 1 cut(s) | 1020 |
| BmeT110I | CYCGRG | 2 cut(s) | 2588, 3137 |
| BmgT120I | GGNCC | 1 cut(s) | 1020 |
| BmiI | GGNNCC | 1 cut(s) | 919 |
| BmrFI | CCNGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| BpiI | GAAGAC | 2 cut(s) | 338, 1110 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2614, 2646 |
| BpmI | CTGGAG | 2 cut(s) | 1386, 2616 |
| Bpu10I | CCTNAGC | 2 cut(s) | 228, 3384 |
| Bpu14I | TTCGAA | 3 cut(s) | 109, 672, 1972 |
| BpuEI | CTTGAG | 8 cut(s) | 380, 812, 1326, 1789, 2805, 2945, 3374, 3599 |
| Bsa29I | ATCGAT | 1 cut(s) | 3448 |
| BsaAI | YACGTR | 1 cut(s) | 3674 |
| BsaHI | GRCGYC | 1 cut(s) | 711 |
| BsaJI | CCNNGG | 4 cut(s) | 384, 613, 1685, 3585 |
| BsaWI | WCCGGW | 1 cut(s) | 3014 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2976, 3006 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 456, 1364, 2357, 2659, 2710, 3029, 3214 |
| Bse1I | ACTGG | 3 cut(s) | 48, 1742, 2205 |
| Bse21I | CCTNAGG | 1 cut(s) | 1907 |
| Bse3DI | GCAATG | 4 cut(s) | 1271, 1402, 2143, 3520 |
| BseAI | TCCGGA | 1 cut(s) | 3014 |
| BseBI | CCWGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| BseCI | ATCGAT | 1 cut(s) | 3448 |
| BseDI | CCNNGG | 4 cut(s) | 384, 613, 1685, 3585 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 456, 1364, 2357, 2659, 2710, 3029, 3214 |
| BseMI | GCAATG | 4 cut(s) | 1271, 1402, 2143, 3520 |
| BseMII | CTCAG | 9 cut(s) | 57, 219, 467, 978, 1296, 1557, 1898, 2415, 3500 |
| BseNI | ACTGG | 3 cut(s) | 48, 1742, 2205 |
| BseRI | GAGGAG | 5 cut(s) | 402, 2204, 2486, 2842, 3323 |
| BseSI | GKGCMC | 1 cut(s) | 1497 |
| BseXI | GCAGC | 2 cut(s) | 16, 3126 |
| BseYI | CCCAGC | 1 cut(s) | 911 |
| Bsh1236I | CGCG | 2 cut(s) | 358, 1704 |
| BshFI | GGCC | 7 cut(s) | 593, 612, 632, 2208, 2361, 3317, 3382 |
| BshVI | ATCGAT | 1 cut(s) | 3448 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1157, 1497, 2079 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2588, 3137 |
| BsiSI | CCGG | 3 cut(s) | 179, 752, 3015 |
| BslFI | GGGAC | 3 cut(s) | 482, 2333, 3647 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 456, 1364, 2357, 2659, 2710, 3029, 3214 |
| BsmAI | GTCTC | 4 cut(s) | 1533, 2468, 3272, 3458 |
| BsmFI | GGGAC | 3 cut(s) | 482, 2333, 3647 |
| BsmI | GAATGC | 1 cut(s) | 2144 |
| BsnI | GGCC | 7 cut(s) | 593, 612, 632, 2208, 2361, 3317, 3382 |
| BsoBI | CYCGRG | 2 cut(s) | 2588, 3137 |
| Bsp119I | TTCGAA | 3 cut(s) | 109, 672, 1972 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1157, 1497, 2079 |
| Bsp13I | TCCGGA | 1 cut(s) | 3014 |
| Bsp1407I | TGTACA | 1 cut(s) | 2902 |
| Bsp143I | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| BspACI | CCGC | 7 cut(s) | 32, 584, 1127, 1639, 2354, 2394, 3639 |
| BspANI | GGCC | 7 cut(s) | 593, 612, 632, 2208, 2361, 3317, 3382 |
| BspCNI | CTCAG | 9 cut(s) | 58, 220, 466, 977, 1295, 1558, 1899, 2416, 3501 |
| BspDI | ATCGAT | 1 cut(s) | 3448 |
| BspEI | TCCGGA | 1 cut(s) | 3014 |
| BspFNI | CGCG | 2 cut(s) | 358, 1704 |
| BspHI | TCATGA | 1 cut(s) | 1026 |
| BspLI | GGNNCC | 1 cut(s) | 919 |
| BspPI | GGATC | 5 cut(s) | 399, 912, 925, 1061, 3349 |
| BspQI | GCTCTTC | 1 cut(s) | 792 |
| BspT104I | TTCGAA | 3 cut(s) | 109, 672, 1972 |
| BspTI | CTTAAG | 3 cut(s) | 2236, 2384, 2996 |
| BsrBI | CCGCTC | 1 cut(s) | 2356 |
| BsrDI | GCAATG | 4 cut(s) | 1271, 1402, 2143, 3520 |
| BsrGI | TGTACA | 1 cut(s) | 2902 |
| BsrI | ACTGG | 3 cut(s) | 48, 1742, 2205 |
| BssECI | CCNNGG | 4 cut(s) | 384, 613, 1685, 3585 |
| BssMI | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| BssNI | GRCGYC | 1 cut(s) | 711 |
| BssSI | CACGAG | 1 cut(s) | 1584 |
| BssT1I | CCWWGG | 2 cut(s) | 384, 1685 |
| Bst2BI | CACGAG | 1 cut(s) | 1584 |
| Bst2UI | CCWGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| Bst4CI | ACNGT | 5 cut(s) | 1109, 2453, 2569, 2948, 3264 |
| Bst6I | CTCTTC | 5 cut(s) | 792, 801, 1866, 2016, 2484 |
| BstACI | GRCGYC | 1 cut(s) | 711 |
| BstAFI | CTTAAG | 3 cut(s) | 2236, 2384, 2996 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3559 |
| BstAUI | TGTACA | 1 cut(s) | 2902 |
| BstBAI | YACGTR | 1 cut(s) | 3674 |
| BstBI | TTCGAA | 3 cut(s) | 109, 672, 1972 |
| BstC8I | GCNNGC | 6 cut(s) | 1826, 2032, 3119, 3147, 3315, 3555 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3027 |
| BstFNI | CGCG | 2 cut(s) | 358, 1704 |
| BstHHI | GCGC | 2 cut(s) | 358, 2464 |
| BstKTI | GATC | 8 cut(s) | 375, 394, 920, 1069, 1427, 1902, 3344, 3613 |
| BstMAI | GTCTC | 4 cut(s) | 1533, 2468, 3272, 3458 |
| BstMBI | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 11, 224, 590, 1152, 1467, 2105, 2974, 3256, 3559 |
| BstNI | CCWGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| BstNSI | RCATGY | 2 cut(s) | 1476, 1580 |
| BstSCI | CCNGG | 5 cut(s) | 431, 1363, 2632, 3181, 3585 |
| BstSFI | CTRYAG | 2 cut(s) | 2518, 3260 |
| BstSLI | GKGCMC | 1 cut(s) | 1497 |
| BstUI | CGCG | 2 cut(s) | 358, 1704 |
| BstV1I | GCAGC | 2 cut(s) | 16, 3126 |
| BstV2I | GAAGAC | 2 cut(s) | 338, 1110 |
| BstX2I | RGATCY | 2 cut(s) | 391, 917 |
| BstYI | RGATCY | 2 cut(s) | 391, 917 |
| Bsu15I | ATCGAT | 1 cut(s) | 3448 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1907 |
| BsuI | GTATCC | 1 cut(s) | 706 |
| BsuRI | GGCC | 7 cut(s) | 593, 612, 632, 2208, 2361, 3317, 3382 |
| BsuTUI | ATCGAT | 1 cut(s) | 3448 |
| BtgZI | GCGATG | 2 cut(s) | 1039, 2889 |
| BtsIMutI | CAGTG | 5 cut(s) | 1290, 1998, 2458, 2492, 3269 |
| Cac8I | GCNNGC | 6 cut(s) | 1826, 2032, 3119, 3147, 3315, 3555 |
| CciI | TCATGA | 1 cut(s) | 1026 |
| CfoI | GCGC | 2 cut(s) | 358, 2464 |
| Cfr13I | GGNCC | 1 cut(s) | 1020 |
| ClaI | ATCGAT | 1 cut(s) | 3448 |
| CseI | GACGC | 1 cut(s) | 1693 |
| Csp6I | GTAC | 8 cut(s) | 253, 796, 826, 836, 1932, 2198, 2903, 3001 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1119, 1154 |
| CviAII | CATG | 9 cut(s) | 87, 465, 1027, 1473, 1577, 2254, 2906, 3004, 3055 |
| CviQI | GTAC | 8 cut(s) | 253, 796, 826, 836, 1932, 2198, 2903, 3001 |
| DpnI | GATC | 8 cut(s) | 374, 393, 919, 1068, 1426, 1901, 3343, 3612 |
| DpnII | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| DraI | TTTAAA | 1 cut(s) | 1189 |
| DraIII | CACNNNGTG | 1 cut(s) | 3648 |
| EaeI | YGGCCR | 4 cut(s) | 591, 630, 2359, 3315 |
| Eam1104I | CTCTTC | 5 cut(s) | 792, 801, 1866, 2016, 2484 |
| EarI | CTCTTC | 5 cut(s) | 792, 801, 1866, 2016, 2484 |
| Eco130I | CCWWGG | 2 cut(s) | 384, 1685 |
| Eco147I | AGGCCT | 2 cut(s) | 612, 2208 |
| Eco32I | GATATC | 2 cut(s) | 2602, 3160 |
| Eco47I | GGWCC | 1 cut(s) | 1020 |
| Eco57I | CTGAAG | 3 cut(s) | 240, 1122, 1823 |
| Eco81I | CCTNAGG | 1 cut(s) | 1907 |
| Eco88I | CYCGRG | 2 cut(s) | 2588, 3137 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3027 |
| EcoRII | CCWGG | 5 cut(s) | 431, 1363, 2632, 3181, 3585 |
| EcoRV | GATATC | 2 cut(s) | 2602, 3160 |
| EcoT14I | CCWWGG | 2 cut(s) | 384, 1685 |
| EcoT22I | ATGCAT | 1 cut(s) | 382 |
| ErhI | CCWWGG | 2 cut(s) | 384, 1685 |
| FaeI | CATG | 9 cut(s) | 90, 468, 1030, 1476, 1580, 2257, 2909, 3007, 3058 |
| FalI | AAGNNNNNCTT | 7 cut(s) | 35, 90, 122, 564, 596, 1526, 1558 |
| FaqI | GGGAC | 3 cut(s) | 482, 2333, 3647 |
| FatI | CATG | 9 cut(s) | 86, 464, 1026, 1472, 1576, 2253, 2905, 3003, 3054 |
| FauNDI | CATATG | 3 cut(s) | 291, 732, 2150 |
| FbaI | TGATCA | 1 cut(s) | 1899 |
| Fnu4HI | GCNGC | 4 cut(s) | 30, 1128, 3115, 3640 |
| Fsp4HI | GCNGC | 4 cut(s) | 30, 1128, 3115, 3640 |
| FspBI | CTAG | 8 cut(s) | 422, 1604, 2673, 2724, 2978, 3024, 3029, 3273 |
| GlaI | GCGC | 2 cut(s) | 357, 2463 |
| GluI | GCNGC | 4 cut(s) | 30, 1128, 3115, 3640 |
| GsaI | CCCAGC | 1 cut(s) | 915 |
| GsuI | CTGGAG | 2 cut(s) | 1386, 2616 |
| HaeIII | GGCC | 7 cut(s) | 593, 612, 632, 2208, 2361, 3317, 3382 |
| HapII | CCGG | 3 cut(s) | 179, 752, 3015 |
| HgaI | GACGC | 1 cut(s) | 1693 |
| HhaI | GCGC | 2 cut(s) | 358, 2464 |
| Hin1I | GRCGYC | 1 cut(s) | 711 |
| Hin1II | CATG | 9 cut(s) | 90, 468, 1030, 1476, 1580, 2257, 2909, 3007, 3058 |
| Hin6I | GCGC | 2 cut(s) | 356, 2462 |
| HinP1I | GCGC | 2 cut(s) | 356, 2462 |
| HincII | GTYRAC | 3 cut(s) | 2169, 2559, 3372 |
| HindII | GTYRAC | 3 cut(s) | 2169, 2559, 3372 |
| HindIII | AAGCTT | 5 cut(s) | 113, 899, 1133, 1528, 1695 |
| HpaI | GTTAAC | 1 cut(s) | 2169 |
| HpaII | CCGG | 3 cut(s) | 179, 752, 3015 |
| HphI | GGTGA | 9 cut(s) | 64, 121, 208, 413, 1242, 1353, 2674, 2725, 3562 |
| Hpy166II | GTNNAC | 6 cut(s) | 643, 1495, 2169, 2449, 2559, 3372 |
| Hpy8I | GTNNAC | 6 cut(s) | 643, 1495, 2169, 2449, 2559, 3372 |
| Hpy99I | CGWCG | 3 cut(s) | 713, 1661, 3256 |
| HpyCH4III | ACNGT | 5 cut(s) | 1109, 2453, 2569, 2948, 3264 |
| HpyCH4IV | ACGT | 6 cut(s) | 711, 846, 1844, 2955, 3071, 3673 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 11, 224, 590, 1152, 1467, 2105, 2974, 3256, 3559 |
| HpySE526I | ACGT | 6 cut(s) | 711, 846, 1844, 2955, 3071, 3673 |
| Hsp92I | GRCGYC | 1 cut(s) | 711 |
| Hsp92II | CATG | 9 cut(s) | 90, 468, 1030, 1476, 1580, 2257, 2909, 3007, 3058 |
| HspAI | GCGC | 2 cut(s) | 356, 2462 |
| Kpn2I | TCCGGA | 1 cut(s) | 3014 |
| Ksp22I | TGATCA | 1 cut(s) | 1899 |
| KspAI | GTTAAC | 1 cut(s) | 2169 |
| Kzo9I | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| LguI | GCTCTTC | 1 cut(s) | 792 |
| LmnI | GCTCC | 7 cut(s) | 181, 2074, 2420, 2635, 2803, 3111, 3310 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 3126 |
| MaeI | CTAG | 8 cut(s) | 422, 1604, 2673, 2724, 2978, 3024, 3029, 3273 |
| MaeII | ACGT | 6 cut(s) | 711, 846, 1844, 2955, 3071, 3673 |
| MaeIII | GTNAC | 5 cut(s) | 931, 944, 2319, 3540, 3605 |
| MalI | GATC | 8 cut(s) | 374, 393, 919, 1068, 1426, 1901, 3343, 3612 |
| MbiI | CCGCTC | 1 cut(s) | 2356 |
| MboI | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| MfeI | CAATTG | 2 cut(s) | 1749, 2172 |
| MflI | RGATCY | 2 cut(s) | 391, 917 |
| MhlI | GDGCHC | 3 cut(s) | 1157, 1497, 2079 |
| MlsI | TGGCCA | 3 cut(s) | 593, 632, 3317 |
| MluI | ACGCGT | 1 cut(s) | 1702 |
| MluNI | TGGCCA | 3 cut(s) | 593, 632, 3317 |
| MlyI | GAGTC | 6 cut(s) | 131, 476, 551, 2355, 2470, 2764 |
| MmeI | TCCRAC | 6 cut(s) | 723, 792, 2208, 2236, 2577, 3319 |
| Mox20I | TGGCCA | 3 cut(s) | 593, 632, 3317 |
| Mph1103I | ATGCAT | 1 cut(s) | 382 |
| MroI | TCCGGA | 1 cut(s) | 3014 |
| MroXI | GAANNNNTTC | 7 cut(s) | 74, 1000, 1611, 1737, 1875, 2611, 3408 |
| MscI | TGGCCA | 3 cut(s) | 593, 632, 3317 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2149 |
| Msp20I | TGGCCA | 3 cut(s) | 593, 632, 3317 |
| MspA1I | CMGCKG | 1 cut(s) | 3639 |
| MspCI | CTTAAG | 3 cut(s) | 2236, 2384, 2996 |
| MspI | CCGG | 3 cut(s) | 179, 752, 3015 |
| MspR9I | CCNGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| MunI | CAATTG | 2 cut(s) | 1749, 2172 |
| Mva1269I | GAATGC | 1 cut(s) | 2144 |
| MvaI | CCWGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| MvnI | CGCG | 2 cut(s) | 358, 1704 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 11, 224, 590, 1152, 1467, 2105, 2974, 3256, 3559 |
| NdeI | CATATG | 3 cut(s) | 291, 732, 2150 |
| NdeII | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| NlaIII | CATG | 9 cut(s) | 90, 468, 1030, 1476, 1580, 2257, 2909, 3007, 3058 |
| NlaIV | GGNNCC | 1 cut(s) | 919 |
| NmeAIII | GCCGAG | 1 cut(s) | 2337 |
| NmuCI | GTSAC | 2 cut(s) | 931, 3605 |
| NsiI | ATGCAT | 1 cut(s) | 382 |
| NspI | RCATGY | 2 cut(s) | 1476, 1580 |
| NspV | TTCGAA | 3 cut(s) | 109, 672, 1972 |
| PaeR7I | CTCGAG | 2 cut(s) | 2588, 3137 |
| PagI | TCATGA | 1 cut(s) | 1026 |
| PceI | AGGCCT | 2 cut(s) | 612, 2208 |
| PciI | ACATGT | 1 cut(s) | 1576 |
| PciSI | GCTCTTC | 1 cut(s) | 792 |
| PctI | GAATGC | 1 cut(s) | 2144 |
| PdmI | GAANNNNTTC | 7 cut(s) | 74, 1000, 1611, 1737, 1875, 2611, 3408 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2659 |
| PkrI | GCNGC | 4 cut(s) | 31, 1129, 3116, 3641 |
| PleI | GAGTC | 6 cut(s) | 130, 476, 551, 2354, 2470, 2764 |
| PpsI | GAGTC | 6 cut(s) | 130, 476, 551, 2354, 2470, 2764 |
| Ppu21I | YACGTR | 1 cut(s) | 3674 |
| PscI | ACATGT | 1 cut(s) | 1576 |
| PshBI | ATTAAT | 2 cut(s) | 2528, 3081 |
| Psp6I | CCWGG | 5 cut(s) | 431, 1363, 2632, 3181, 3585 |
| PspFI | CCCAGC | 1 cut(s) | 911 |
| PspGI | CCWGG | 5 cut(s) | 431, 1363, 2632, 3181, 3585 |
| PspN4I | GGNNCC | 1 cut(s) | 919 |
| PspPI | GGNCC | 1 cut(s) | 1020 |
| PsuI | RGATCY | 2 cut(s) | 391, 917 |
| RsaI | GTAC | 8 cut(s) | 254, 797, 827, 837, 1933, 2199, 2904, 3002 |
| RsaNI | GTAC | 8 cut(s) | 253, 796, 826, 836, 1932, 2198, 2903, 3001 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2149 |
| SapI | GCTCTTC | 1 cut(s) | 792 |
| SatI | GCNGC | 4 cut(s) | 30, 1128, 3115, 3640 |
| Sau3AI | GATC | 8 cut(s) | 372, 391, 917, 1066, 1424, 1899, 3341, 3610 |
| Sau96I | GGNCC | 1 cut(s) | 1020 |
| SchI | GAGTC | 6 cut(s) | 131, 476, 551, 2355, 2470, 2764 |
| ScrFI | CCNGG | 5 cut(s) | 433, 1365, 2634, 3183, 3587 |
| SduI | GDGCHC | 3 cut(s) | 1157, 1497, 2079 |
| SfcI | CTRYAG | 2 cut(s) | 2518, 3260 |
| Sfr274I | CTCGAG | 2 cut(s) | 2588, 3137 |
| SfuI | TTCGAA | 3 cut(s) | 109, 672, 1972 |
| SinI | GGWCC | 1 cut(s) | 1020 |
| SlaI | CTCGAG | 2 cut(s) | 2588, 3137 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2149 |
| SpeI | ACTAGT | 1 cut(s) | 421 |
| SseBI | AGGCCT | 2 cut(s) | 612, 2208 |
| SsiI | CCGC | 7 cut(s) | 32, 584, 1127, 1639, 2354, 2394, 3639 |
| SspI | AATATT | 2 cut(s) | 1403, 1612 |
| SspMI | CTAG | 8 cut(s) | 422, 1604, 2673, 2724, 2978, 3024, 3029, 3273 |
| StuI | AGGCCT | 2 cut(s) | 612, 2208 |
| StyD4I | CCNGG | 5 cut(s) | 431, 1363, 2632, 3181, 3585 |
| StyI | CCWWGG | 2 cut(s) | 384, 1685 |
| TaaI | ACNGT | 5 cut(s) | 1109, 2453, 2569, 2948, 3264 |
| TaiI | ACGT | 6 cut(s) | 714, 849, 1847, 2958, 3074, 3676 |
| TaqII | GACCGA | 1 cut(s) | 569 |
| TatI | WGTACW | 4 cut(s) | 1931, 2197, 2902, 3000 |
| TauI | GCSGC | 2 cut(s) | 1130, 3642 |
| TscAI | CASTG | 5 cut(s) | 1290, 1998, 2458, 2499, 3269 |
| TseFI | GTSAC | 2 cut(s) | 931, 3605 |
| TseI | GCWGC | 2 cut(s) | 29, 3114 |
| Tsp45I | GTSAC | 2 cut(s) | 931, 3605 |
| TspGWI | ACGGA | 2 cut(s) | 3197, 3471 |
| TspRI | CASTG | 5 cut(s) | 1290, 1998, 2458, 2499, 3269 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2659 |
| Vha464I | CTTAAG | 3 cut(s) | 2236, 2384, 2996 |
| VneI | GTGCAC | 1 cut(s) | 1493 |
| VpaK11BI | GGWCC | 1 cut(s) | 1020 |
| VspI | ATTAAT | 2 cut(s) | 2528, 3081 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3027 |
| XapI | RAATTY | 9 cut(s) | 245, 363, 1305, 1410, 1711, 1937, 2696, 3226, 3408 |
| XceI | RCATGY | 2 cut(s) | 1476, 1580 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 601, 1361 |
| XhoI | CTCGAG | 2 cut(s) | 2588, 3137 |
| XmnI | GAANNNNTTC | 7 cut(s) | 74, 1000, 1611, 1737, 1875, 2611, 3408 |
| XspI | CTAG | 8 cut(s) | 422, 1604, 2673, 2724, 2978, 3024, 3029, 3273 |
| ZraI | GACGTC | 1 cut(s) | 712 |
| Zsp2I | ATGCAT | 1 cut(s) | 382 |