disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 14 - 96 | 9.5e-16 | Rx N-terminal domain |
| NB-ARC | PF00931 | 173 - 350 | 9.9e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 506 | 3e-26 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 550 - 770 | 2.6e-30 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 677 - 796 | 8.6e-33 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 951 - 1067 | 4.4e-12 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1007 - 1061 | 5.2e-06 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2756 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2207 |
| Acc16I | TGCGCA | 1 cut(s) | 2723 |
| Acc36I | ACCTGC | 1 cut(s) | 2593 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 867 |
| AccBSI | CCGCTC | 2 cut(s) | 2311, 2371 |
| AccI | GTMKAC | 1 cut(s) | 2701 |
| AccII | CGCG | 1 cut(s) | 1716 |
| AccIII | TCCGGA | 1 cut(s) | 1001 |
| AciI | CCGC | 7 cut(s) | 5, 581, 1651, 2309, 2369, 2532, 3240 |
| AclWI | GGATC | 6 cut(s) | 399, 909, 922, 1049, 2900, 2950 |
| AcoI | YGGCCR | 4 cut(s) | 179, 588, 627, 1166 |
| AcsI | RAATTY | 7 cut(s) | 363, 678, 1317, 1723, 1949, 3009, 3139 |
| AcuI | CTGAAG | 8 cut(s) | 30, 65, 1835, 2525, 2597, 2697, 3155, 3352 |
| AfaI | GTAC | 3 cut(s) | 254, 834, 2618 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 453, 867, 2372, 2887 |
| AflII | CTTAAG | 2 cut(s) | 1780, 2248 |
| AflIII | ACRYGT | 2 cut(s) | 1588, 1714 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2818 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 492, 524 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 842, 874 |
| Alw21I | GWGCWC | 3 cut(s) | 108, 1509, 2916 |
| Alw26I | GTCTC | 4 cut(s) | 1545, 1915, 3000, 3059 |
| Alw44I | GTGCAC | 1 cut(s) | 1505 |
| AlwI | GGATC | 6 cut(s) | 399, 909, 922, 1049, 2900, 2950 |
| Ama87I | CYCGRG | 3 cut(s) | 248, 395, 1596 |
| Aor13HI | TCCGGA | 1 cut(s) | 1001 |
| ApaLI | GTGCAC | 1 cut(s) | 1505 |
| ApeKI | GCWGC | 2 cut(s) | 65, 2787 |
| ApoI | RAATTY | 7 cut(s) | 363, 678, 1317, 1723, 1949, 3009, 3139 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 650, 682, 912, 933, 944, 965 |
| AseI | ATTAAT | 2 cut(s) | 2069, 2948 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 997, 1623, 1749, 1887 |
| AspLEI | GCGC | 1 cut(s) | 2724 |
| AspS9I | GGNCC | 6 cut(s) | 355, 1017, 2375, 2391, 2454, 2523 |
| AsuHPI | GGTGA | 8 cut(s) | 208, 922, 1254, 1685, 2075, 2521, 2794, 3163 |
| AsuII | TTCGAA | 1 cut(s) | 1984 |
| AsuNHI | GCTAGC | 1 cut(s) | 2042 |
| AvaI | CYCGRG | 3 cut(s) | 248, 395, 1596 |
| AvaII | GGWCC | 2 cut(s) | 1017, 2523 |
| BaeGI | GKGCMC | 2 cut(s) | 1509, 1879 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1955, 1988 |
| BalI | TGGCCA | 2 cut(s) | 590, 629 |
| BamHI | GGATCC | 1 cut(s) | 914 |
| BanII | GRGCYC | 2 cut(s) | 108, 2916 |
| BauI | CACGAG | 2 cut(s) | 2399, 2462 |
| BbsI | GAAGAC | 2 cut(s) | 229, 338 |
| Bbv12I | GWGCWC | 3 cut(s) | 108, 1509, 2916 |
| BbvI | GCAGC | 2 cut(s) | 52, 2799 |
| BccI | CCATC | 6 cut(s) | 599, 725, 1028, 1273, 1342, 2420 |
| BceAI | ACGGC | 2 cut(s) | 1083, 1153 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1882, 1916 |
| BciVI | GTATCC | 2 cut(s) | 703, 1956 |
| BclI | TGATCA | 1 cut(s) | 1911 |
| BcoDI | GTCTC | 4 cut(s) | 1545, 1915, 3000, 3059 |
| BfaI | CTAG | 6 cut(s) | 1047, 1641, 2043, 2213, 3188, 3381 |
| BfmI | CTRYAG | 1 cut(s) | 1830 |
| BfrI | CTTAAG | 2 cut(s) | 1780, 2248 |
| BfuAI | ACCTGC | 1 cut(s) | 2593 |
| BfuI | GTATCC | 2 cut(s) | 703, 1956 |
| BisI | GCNGC | 4 cut(s) | 6, 66, 2788, 3241 |
| BlpI | GCTNAGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 4 cut(s) | 7, 67, 2789, 3242 |
| BmcAI | AGTACT | 1 cut(s) | 2618 |
| Bme18I | GGWCC | 2 cut(s) | 1017, 2523 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2818 |
| BmeT110I | CYCGRG | 3 cut(s) | 248, 395, 1596 |
| BmgT120I | GGNCC | 6 cut(s) | 355, 1017, 2375, 2391, 2454, 2523 |
| BmiI | GGNNCC | 3 cut(s) | 916, 2524, 2525 |
| BmsI | GCATC | 9 cut(s) | 214, 389, 416, 962, 1441, 1482, 2624, 2962, 3215 |
| BmtI | GCTAGC | 1 cut(s) | 2046 |
| BpiI | GAAGAC | 2 cut(s) | 229, 338 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2985 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 102 |
| Bpu14I | TTCGAA | 1 cut(s) | 1984 |
| BpuEI | CTTGAG | 5 cut(s) | 1255, 1338, 1598, 2255, 2975 |
| BsaJI | CCNNGG | 5 cut(s) | 33, 384, 610, 1099, 2285 |
| BsaWI | WCCGGW | 1 cut(s) | 1001 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2675, 2705 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 453, 867, 2372, 2887 |
| Bse1I | ACTGG | 4 cut(s) | 1229, 1620, 1754, 3315 |
| Bse3DI | GCAATG | 2 cut(s) | 1283, 1414 |
| BseAI | TCCGGA | 1 cut(s) | 1001 |
| BseDI | CCNNGG | 5 cut(s) | 33, 384, 610, 1099, 2285 |
| BseGI | GGATG | 9 cut(s) | 238, 380, 717, 1353, 2295, 2348, 2639, 3095, 3205 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 453, 867, 2372, 2887 |
| BseMI | GCAATG | 2 cut(s) | 1283, 1414 |
| BseMII | CTCAG | 5 cut(s) | 93, 464, 913, 975, 1910 |
| BseNI | ACTGG | 4 cut(s) | 1229, 1620, 1754, 3315 |
| BseRI | GAGGAG | 3 cut(s) | 402, 2699, 2924 |
| BseSI | GKGCMC | 2 cut(s) | 1509, 1879 |
| BseXI | GCAGC | 2 cut(s) | 52, 2799 |
| BsgI | GTGCAG | 1 cut(s) | 3345 |
| Bsh1236I | CGCG | 1 cut(s) | 1716 |
| BsiHKAI | GWGCWC | 3 cut(s) | 108, 1509, 2916 |
| BsiHKCI | CYCGRG | 3 cut(s) | 248, 395, 1596 |
| BsiSI | CCGG | 1 cut(s) | 1002 |
| BslFI | GGGAC | 5 cut(s) | 778, 1208, 2348, 2509, 2589 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 453, 867, 2372, 2887 |
| BsmAI | GTCTC | 4 cut(s) | 1545, 1915, 3000, 3059 |
| BsmFI | GGGAC | 5 cut(s) | 778, 1208, 2348, 2509, 2589 |
| BsmI | GAATGC | 2 cut(s) | 482, 1738 |
| BsoBI | CYCGRG | 3 cut(s) | 248, 395, 1596 |
| Bsp119I | TTCGAA | 1 cut(s) | 1984 |
| Bsp1286I | GDGCHC | 4 cut(s) | 108, 1509, 1879, 2916 |
| Bsp13I | TCCGGA | 1 cut(s) | 1001 |
| Bsp143I | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 102 |
| BspACI | CCGC | 7 cut(s) | 5, 581, 1651, 2309, 2369, 2532, 3240 |
| BspCNI | CTCAG | 5 cut(s) | 94, 463, 912, 974, 1911 |
| BspEI | TCCGGA | 1 cut(s) | 1001 |
| BspFNI | CGCG | 1 cut(s) | 1716 |
| BspHI | TCATGA | 2 cut(s) | 220, 1023 |
| BspLI | GGNNCC | 3 cut(s) | 916, 2524, 2525 |
| BspMI | ACCTGC | 1 cut(s) | 2593 |
| BspOI | GCTAGC | 1 cut(s) | 2046 |
| BspPI | GGATC | 6 cut(s) | 399, 909, 922, 1049, 2900, 2950 |
| BspQI | GCTCTTC | 1 cut(s) | 2595 |
| BspT104I | TTCGAA | 1 cut(s) | 1984 |
| BspTI | CTTAAG | 2 cut(s) | 1780, 2248 |
| BsrBI | CCGCTC | 2 cut(s) | 2311, 2371 |
| BsrDI | GCAATG | 2 cut(s) | 1283, 1414 |
| BsrI | ACTGG | 4 cut(s) | 1229, 1620, 1754, 3315 |
| BssECI | CCNNGG | 5 cut(s) | 33, 384, 610, 1099, 2285 |
| BssMI | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| BssSI | CACGAG | 2 cut(s) | 2399, 2462 |
| BssT1I | CCWWGG | 2 cut(s) | 384, 2285 |
| Bst2BI | CACGAG | 2 cut(s) | 2399, 2462 |
| Bst4CI | ACNGT | 6 cut(s) | 508, 1477, 1659, 1673, 1701, 2748 |
| Bst6I | CTCTTC | 7 cut(s) | 798, 1878, 2028, 2318, 2544, 2595, 2616 |
| BstAFI | CTTAAG | 2 cut(s) | 1780, 2248 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1637, 3332 |
| BstBI | TTCGAA | 1 cut(s) | 1984 |
| BstC8I | GCNNGC | 4 cut(s) | 1838, 2044, 2792, 3337 |
| BstDEI | CTNAG | 9 cut(s) | 102, 450, 899, 961, 1059, 1919, 2957, 2985, 3255 |
| BstDSI | CCRYGG | 1 cut(s) | 1099 |
| BstF5I | GGATG | 9 cut(s) | 238, 380, 717, 1353, 2295, 2348, 2639, 3095, 3205 |
| BstFNI | CGCG | 1 cut(s) | 1716 |
| BstHHI | GCGC | 1 cut(s) | 2724 |
| BstKTI | GATC | 9 cut(s) | 375, 394, 917, 1057, 1501, 1914, 2895, 2945, 2963 |
| BstMAI | GTCTC | 4 cut(s) | 1545, 1915, 3000, 3059 |
| BstMBI | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 11, 112, 224, 587, 1479, 1637, 2117, 2154, 3332 |
| BstNSI | RCATGY | 1 cut(s) | 1592 |
| BstSFI | CTRYAG | 1 cut(s) | 1830 |
| BstSLI | GKGCMC | 2 cut(s) | 1509, 1879 |
| BstUI | CGCG | 1 cut(s) | 1716 |
| BstV1I | GCAGC | 2 cut(s) | 52, 2799 |
| BstV2I | GAAGAC | 2 cut(s) | 229, 338 |
| BstX2I | RGATCY | 2 cut(s) | 391, 914 |
| BstYI | RGATCY | 2 cut(s) | 391, 914 |
| BsuI | GTATCC | 2 cut(s) | 703, 1956 |
| BtgI | CCRYGG | 1 cut(s) | 1099 |
| BtgZI | GCGATG | 1 cut(s) | 2439 |
| BtsCI | GGATG | 9 cut(s) | 238, 380, 717, 1353, 2295, 2348, 2639, 3095, 3205 |
| BtsI | GCAGTG | 2 cut(s) | 1057, 1872 |
| BtsIMutI | CAGTG | 5 cut(s) | 1057, 1473, 1613, 1655, 1872 |
| BveI | ACCTGC | 1 cut(s) | 2593 |
| Cac8I | GCNNGC | 4 cut(s) | 1838, 2044, 2792, 3337 |
| CciI | TCATGA | 2 cut(s) | 220, 1023 |
| CfoI | GCGC | 1 cut(s) | 2724 |
| Cfr13I | GGNCC | 6 cut(s) | 355, 1017, 2375, 2391, 2454, 2523 |
| CseI | GACGC | 1 cut(s) | 1705 |
| Csp6I | GTAC | 3 cut(s) | 253, 833, 2617 |
| CviQI | GTAC | 3 cut(s) | 253, 833, 2617 |
| DdeI | CTNAG | 9 cut(s) | 102, 450, 899, 961, 1059, 1919, 2957, 2985, 3255 |
| DpnI | GATC | 9 cut(s) | 374, 393, 916, 1056, 1500, 1913, 2894, 2944, 2962 |
| DpnII | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| DraI | TTTAAA | 1 cut(s) | 1177 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2207 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2818 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2207 |
| EaeI | YGGCCR | 4 cut(s) | 179, 588, 627, 1166 |
| Eam1104I | CTCTTC | 7 cut(s) | 798, 1878, 2028, 2318, 2544, 2595, 2616 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2818 |
| EarI | CTCTTC | 7 cut(s) | 798, 1878, 2028, 2318, 2544, 2595, 2616 |
| Ecl136II | GAGCTC | 2 cut(s) | 106, 2914 |
| Eco130I | CCWWGG | 2 cut(s) | 384, 2285 |
| Eco147I | AGGCCT | 2 cut(s) | 609, 2220 |
| Eco24I | GRGCYC | 2 cut(s) | 108, 2916 |
| Eco32I | GATATC | 2 cut(s) | 1945, 3277 |
| Eco47I | GGWCC | 2 cut(s) | 1017, 2523 |
| Eco53kI | GAGCTC | 2 cut(s) | 106, 2914 |
| Eco57I | CTGAAG | 8 cut(s) | 30, 65, 1835, 2525, 2597, 2697, 3155, 3352 |
| Eco88I | CYCGRG | 3 cut(s) | 248, 395, 1596 |
| EcoICRI | GAGCTC | 2 cut(s) | 106, 2914 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2523 |
| EcoRV | GATATC | 2 cut(s) | 1945, 3277 |
| EcoT14I | CCWWGG | 2 cut(s) | 384, 2285 |
| EcoT22I | ATGCAT | 3 cut(s) | 382, 1497, 2955 |
| EcoT38I | GRGCYC | 2 cut(s) | 108, 2916 |
| ErhI | CCWWGG | 2 cut(s) | 384, 2285 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 35, 561, 593, 1538, 1570 |
| FaqI | GGGAC | 5 cut(s) | 778, 1208, 2348, 2509, 2589 |
| FauNDI | CATATG | 1 cut(s) | 291 |
| FbaI | TGATCA | 1 cut(s) | 1911 |
| FblI | GTMKAC | 1 cut(s) | 2701 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 66, 2788, 3241 |
| FokI | GGATG | 9 cut(s) | 245, 367, 704, 1360, 2302, 2355, 2646, 3082, 3192 |
| FriOI | GRGCYC | 2 cut(s) | 108, 2916 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 66, 2788, 3241 |
| FspBI | CTAG | 6 cut(s) | 1047, 1641, 2043, 2213, 3188, 3381 |
| FspI | TGCGCA | 1 cut(s) | 2723 |
| GlaI | GCGC | 1 cut(s) | 2723 |
| GluI | GCNGC | 4 cut(s) | 6, 66, 2788, 3241 |
| HapII | CCGG | 1 cut(s) | 1002 |
| HgaI | GACGC | 1 cut(s) | 1705 |
| HhaI | GCGC | 1 cut(s) | 2724 |
| Hin6I | GCGC | 1 cut(s) | 2722 |
| HinP1I | GCGC | 1 cut(s) | 2722 |
| HincII | GTYRAC | 2 cut(s) | 1974, 2181 |
| HindII | GTYRAC | 2 cut(s) | 1974, 2181 |
| HindIII | AAGCTT | 4 cut(s) | 113, 1540, 1707, 2155 |
| HpaII | CCGG | 1 cut(s) | 1002 |
| HphI | GGTGA | 8 cut(s) | 208, 922, 1254, 1685, 2075, 2521, 2794, 3163 |
| Hpy166II | GTNNAC | 5 cut(s) | 640, 1507, 1974, 2181, 2702 |
| Hpy8I | GTNNAC | 5 cut(s) | 640, 1507, 1974, 2181, 2702 |
| Hpy99I | CGWCG | 2 cut(s) | 1971, 2028 |
| HpyCH4III | ACNGT | 6 cut(s) | 508, 1477, 1659, 1673, 1701, 2748 |
| HpyCH4IV | ACGT | 4 cut(s) | 213, 708, 843, 1966 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 11, 112, 224, 587, 1479, 1637, 2117, 2154, 3332 |
| HpyF3I | CTNAG | 9 cut(s) | 102, 450, 899, 961, 1059, 1919, 2957, 2985, 3255 |
| HpySE526I | ACGT | 4 cut(s) | 213, 708, 843, 1966 |
| HspAI | GCGC | 1 cut(s) | 2722 |
| KflI | GGGWCCC | 1 cut(s) | 2523 |
| Kpn2I | TCCGGA | 1 cut(s) | 1001 |
| Ksp22I | TGATCA | 1 cut(s) | 1911 |
| Kzo9I | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| LguI | GCTCTTC | 1 cut(s) | 2595 |
| LmnI | GCTCC | 1 cut(s) | 2911 |
| Lsp1109I | GCAGC | 2 cut(s) | 52, 2799 |
| LweI | GCATC | 9 cut(s) | 214, 389, 416, 962, 1441, 1482, 2624, 2962, 3215 |
| MaeI | CTAG | 6 cut(s) | 1047, 1641, 2043, 2213, 3188, 3381 |
| MaeII | ACGT | 4 cut(s) | 213, 708, 843, 1966 |
| MaeIII | GTNAC | 6 cut(s) | 464, 538, 928, 1463, 1653, 2345 |
| MalI | GATC | 9 cut(s) | 374, 393, 916, 1056, 1500, 1913, 2894, 2944, 2962 |
| MbiI | CCGCTC | 2 cut(s) | 2311, 2371 |
| MboI | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| MfeI | CAATTG | 4 cut(s) | 1071, 2054, 2161, 2502 |
| MflI | RGATCY | 2 cut(s) | 391, 914 |
| MhlI | GDGCHC | 4 cut(s) | 108, 1509, 1879, 2916 |
| MlsI | TGGCCA | 2 cut(s) | 590, 629 |
| MluI | ACGCGT | 1 cut(s) | 1714 |
| MluNI | TGGCCA | 2 cut(s) | 590, 629 |
| MlyI | GAGTC | 3 cut(s) | 131, 548, 2370 |
| MmeI | TCCRAC | 6 cut(s) | 490, 720, 1689, 2220, 2248, 2920 |
| Mox20I | TGGCCA | 2 cut(s) | 590, 629 |
| Mph1103I | ATGCAT | 3 cut(s) | 382, 1497, 2955 |
| MroI | TCCGGA | 1 cut(s) | 1001 |
| MroXI | GAANNNNTTC | 4 cut(s) | 997, 1623, 1749, 1887 |
| MscI | TGGCCA | 2 cut(s) | 590, 629 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2599, 3109 |
| Msp20I | TGGCCA | 2 cut(s) | 590, 629 |
| MspCI | CTTAAG | 2 cut(s) | 1780, 2248 |
| MspI | CCGG | 1 cut(s) | 1002 |
| MunI | CAATTG | 4 cut(s) | 1071, 2054, 2161, 2502 |
| Mva1269I | GAATGC | 2 cut(s) | 482, 1738 |
| MvnI | CGCG | 1 cut(s) | 1716 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 11, 112, 224, 587, 1479, 1637, 2117, 2154, 3332 |
| NdeI | CATATG | 1 cut(s) | 291 |
| NdeII | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| NheI | GCTAGC | 1 cut(s) | 2042 |
| NlaIV | GGNNCC | 3 cut(s) | 916, 2524, 2525 |
| NmeAIII | GCCGAG | 1 cut(s) | 2352 |
| NmuCI | GTSAC | 6 cut(s) | 464, 538, 928, 1463, 1653, 2345 |
| NsbI | TGCGCA | 1 cut(s) | 2723 |
| NsiI | ATGCAT | 3 cut(s) | 382, 1497, 2955 |
| NspI | RCATGY | 1 cut(s) | 1592 |
| NspV | TTCGAA | 1 cut(s) | 1984 |
| PaeR7I | CTCGAG | 2 cut(s) | 248, 395 |
| PagI | TCATGA | 2 cut(s) | 220, 1023 |
| PceI | AGGCCT | 2 cut(s) | 609, 2220 |
| PciI | ACATGT | 1 cut(s) | 1588 |
| PciSI | GCTCTTC | 1 cut(s) | 2595 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 246, 849 |
| PctI | GAATGC | 2 cut(s) | 482, 1738 |
| PdmI | GAANNNNTTC | 4 cut(s) | 997, 1623, 1749, 1887 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 867 |
| PkrI | GCNGC | 4 cut(s) | 7, 67, 2789, 3242 |
| PleI | GAGTC | 3 cut(s) | 130, 548, 2369 |
| PpsI | GAGTC | 3 cut(s) | 130, 548, 2369 |
| PpuMI | RGGWCCY | 1 cut(s) | 2523 |
| PscI | ACATGT | 1 cut(s) | 1588 |
| PshBI | ATTAAT | 2 cut(s) | 2069, 2948 |
| PsiI | TTATAA | 1 cut(s) | 2756 |
| Psp124BI | GAGCTC | 2 cut(s) | 108, 2916 |
| Psp5II | RGGWCCY | 1 cut(s) | 2523 |
| PspN4I | GGNNCC | 3 cut(s) | 916, 2524, 2525 |
| PspPI | GGNCC | 6 cut(s) | 355, 1017, 2375, 2391, 2454, 2523 |
| PspPPI | RGGWCCY | 1 cut(s) | 2523 |
| PspXI | VCTCGAGB | 1 cut(s) | 248 |
| PsuI | RGATCY | 2 cut(s) | 391, 914 |
| RsaI | GTAC | 3 cut(s) | 254, 834, 2618 |
| RsaNI | GTAC | 3 cut(s) | 253, 833, 2617 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2599, 3109 |
| SacI | GAGCTC | 2 cut(s) | 108, 2916 |
| SapI | GCTCTTC | 1 cut(s) | 2595 |
| SatI | GCNGC | 4 cut(s) | 6, 66, 2788, 3241 |
| Sau3AI | GATC | 9 cut(s) | 372, 391, 914, 1054, 1498, 1911, 2892, 2942, 2960 |
| Sau96I | GGNCC | 6 cut(s) | 355, 1017, 2375, 2391, 2454, 2523 |
| ScaI | AGTACT | 1 cut(s) | 2618 |
| SchI | GAGTC | 3 cut(s) | 131, 548, 2370 |
| SduI | GDGCHC | 4 cut(s) | 108, 1509, 1879, 2916 |
| SfaNI | GCATC | 9 cut(s) | 214, 389, 416, 962, 1441, 1482, 2624, 2962, 3215 |
| SfcI | CTRYAG | 1 cut(s) | 1830 |
| Sfr274I | CTCGAG | 2 cut(s) | 248, 395 |
| SfuI | TTCGAA | 1 cut(s) | 1984 |
| SinI | GGWCC | 2 cut(s) | 1017, 2523 |
| SlaI | CTCGAG | 2 cut(s) | 248, 395 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2599, 3109 |
| SmlI | CTYRAG | 9 cut(s) | 248, 395, 1234, 1353, 1577, 1780, 2234, 2248, 2990 |
| SmoI | CTYRAG | 9 cut(s) | 248, 395, 1234, 1353, 1577, 1780, 2234, 2248, 2990 |
| SseBI | AGGCCT | 2 cut(s) | 609, 2220 |
| SsiI | CCGC | 7 cut(s) | 5, 581, 1651, 2309, 2369, 2532, 3240 |
| SspI | AATATT | 3 cut(s) | 1299, 1624, 1741 |
| SspMI | CTAG | 6 cut(s) | 1047, 1641, 2043, 2213, 3188, 3381 |
| SstI | GAGCTC | 2 cut(s) | 108, 2916 |
| StuI | AGGCCT | 2 cut(s) | 609, 2220 |
| StyI | CCWWGG | 2 cut(s) | 384, 2285 |
| TaaI | ACNGT | 6 cut(s) | 508, 1477, 1659, 1673, 1701, 2748 |
| TaiI | ACGT | 4 cut(s) | 216, 711, 846, 1969 |
| TaqII | GACCGA | 1 cut(s) | 566 |
| TatI | WGTACW | 1 cut(s) | 2616 |
| TauI | GCSGC | 2 cut(s) | 8, 3243 |
| TscAI | CASTG | 5 cut(s) | 1057, 1480, 1620, 1662, 1872 |
| TseFI | GTSAC | 6 cut(s) | 464, 538, 928, 1463, 1653, 2345 |
| TseI | GCWGC | 2 cut(s) | 65, 2787 |
| Tsp45I | GTSAC | 6 cut(s) | 464, 538, 928, 1463, 1653, 2345 |
| TspGWI | ACGGA | 1 cut(s) | 2870 |
| TspRI | CASTG | 5 cut(s) | 1057, 1480, 1620, 1662, 1872 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 867 |
| Vha464I | CTTAAG | 2 cut(s) | 1780, 2248 |
| VneI | GTGCAC | 1 cut(s) | 1505 |
| VpaK11BI | GGWCC | 2 cut(s) | 1017, 2523 |
| VspI | ATTAAT | 2 cut(s) | 2069, 2948 |
| XapI | RAATTY | 7 cut(s) | 363, 678, 1317, 1723, 1949, 3009, 3139 |
| XceI | RCATGY | 1 cut(s) | 1592 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 189, 598, 2385, 2646 |
| XhoI | CTCGAG | 2 cut(s) | 248, 395 |
| XmiI | GTMKAC | 1 cut(s) | 2701 |
| XmnI | GAANNNNTTC | 4 cut(s) | 997, 1623, 1749, 1887 |
| XspI | CTAG | 6 cut(s) | 1047, 1641, 2043, 2213, 3188, 3381 |
| ZrmI | AGTACT | 1 cut(s) | 2618 |
| Zsp2I | ATGCAT | 3 cut(s) | 382, 1497, 2955 |