Rorug07G0176400

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
14605287 .. 14606855
1569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0176400.1

Sequence Viewer

Length: 1569 bp
ATGACCACTTGGTGGAACTCAGTTACGCAGCTTCGTTTGGATAGGGCGGTGTGTACGCCGTCTTGGTGGGATATTTTTGGGCACTCTAAGCTGCGTCATCTTCCTCCTAGTGATTCTGACCATGTTCCCATTTTGTTGCAAGCTAGTGCGGCGCCATTGGTTTCGCGCCCAAGACATCATCGGTTCAAGTTTGAAGCTTACTGGCTACAGCATACAAATTGTGATAGTATGGTGAAGGAGGCCTGGGACACTGATGTATCTGGGACACCTATGTTCTGTGTCACCAAGAAGATCGCGTTTACGCGTATGCATCTTGATAAATGGCAGAAACAAGTCTTTCGGGGAAGGCAGCAGCAAATGCTTGGTATTCGGGCGAGACTGGAAGAATTAATGGATGTTTCAATCTCAGAGCCGGTTCAGTATGAGAAGAAATGCTTGATGGATCGTCTCCAAATATTGTTATCTCAGGAAGAAGCTTTTTGGAAACAACGATCTCGAGTGACTTGGCTTAAGGAGGGAGACAGAAATACTGGTTACTTTCATAGGAAGGCATCCAATAGGAAACGCAAGAATCTGATTCACGGTCTTTTTGATGAAAATGGGGTATGGTGTGAGGATGATGCTGGACTGGAAAGGATCGTGACTTCATACTTCACTAAGATGTTCTCTGCCTCTGATATTGACAATGTAGCGGTGGATACTACGCTTGAAGCAATTCATCCTCGTGTTACCCAGAATATGAATTCTCAATTGTGTGTGCCGTATACTCAAGAGGAGGTGAAAAGTGCGCTATTTCAAATGTATCCTACTAAGTCGCCTGGCCCGGATGGAATGCCTCCATTATTTTTCCAACATTATTGGGAAACCATAGGGACTGATGTGACAGAGGCAGTTCAGAGTTTTCTTCAGTCAGGTCAGCTACTTCGACAAATTAATTTCACTCACATATGCCTTATTCCAAAGGTCAATAGTCCTGAACAGATGTCTGATTTGAGACCAATTGCACTTTGTAATGTTATTTACAAATTATGCTCGAAAGTCATCGCAAACCGGTTGAAACTGATTCTGCCAGATCTGATTTCACCTTTCCAAAGTGCCTTTGTGCCGGGGAGGCTGATTACAGACAACATTTTAGTGGCTAATGAGATAGCTCATTTTGTACATAATAAGAGAGCAGGAAGTGAGGGTTTTATGGCCTTGAAATTGGATTTGAGTAAGGCATATGATAGAATGGAATGGTCTTTTCTCAGGAAAGTTATGAACAGGTTTGGCTTTGCTCATGATTGGATTGAGACGGTGATGCAATGTGTTTGCTCGGTGAAATATTCTTTTCTTTTGCGTAGAGGATTGAGACAGGGGGATCATTTATCACCTTACTTGTTTCTTATTGGTGCTGAAGGATTTTCTGCCTTGCTTCAAGAGAAACAGGAGCTTGGTTTGTTACCAGGGATCGAGGTTTGTGACAATGCCCCCGCAGTTAATCATTTACTATTTGCGGATGATAGTATGATTTATGCTCATGCTTCGTTGGAGGCTTGTTATGAGTTGCAGGATGTTATTGAGACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

522

Amino Acids

60.14

Weight (kDa)

7.0

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 319 - 508 1.2e-25 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 151
AccB7I CCANNNNNTGG 1 cut(s) 12
AccI GTMKAC 1 cut(s) 764
AccII CGCG 3 cut(s) 166, 296, 304
AciI CCGC 5 cut(s) 47, 149, 692, 1473, 1496
AclWI GGATC 4 cut(s) 450, 644, 1368, 1457
AcsI RAATTY 1 cut(s) 742
AcuI CTGAAG 2 cut(s) 890, 1416
AcyI GRCGYC 1 cut(s) 152
AdeI CACNNNGTG 1 cut(s) 12
AfaI GTAC 2 cut(s) 55, 1161
AfiI CCNNNNNNNGG 1 cut(s) 12
AflII CTTAAG 1 cut(s) 509
AflIII ACRYGT 1 cut(s) 302
AgeI ACCGGT 1 cut(s) 1050
AgsI TTSAA 8 cut(s) 187, 194, 402, 710, 797, 1057, 1201, 1418
AjnI CCWGG 3 cut(s) 242, 817, 1444
AluBI AGCT 8 cut(s) 31, 91, 143, 197, 476, 919, 1151, 1432
AluI AGCT 8 cut(s) 31, 91, 143, 197, 476, 919, 1151, 1432
Alw26I GTCTC 7 cut(s) 370, 452, 513, 988, 1286, 1345, 1556
AlwI GGATC 4 cut(s) 450, 644, 1368, 1457
Ama87I CYCGRG 1 cut(s) 495
AoxI GGCC 3 cut(s) 240, 820, 1194
ApeKI GCWGC 4 cut(s) 28, 91, 349, 352
ApoI RAATTY 1 cut(s) 742
AseI ATTAAT 2 cut(s) 389, 933
AsiGI ACCGGT 1 cut(s) 1050
Asp700I GAANNNNTTC 1 cut(s) 714
AspLEI GCGC 3 cut(s) 154, 168, 790
AspS9I GGNCC 1 cut(s) 821
AsuC2I CCSGG 2 cut(s) 824, 1107
AsuHPI GGTGA 7 cut(s) 244, 274, 790, 1074, 1309, 1330, 1362
AvaI CYCGRG 1 cut(s) 495
BaeGI GKGCMC 1 cut(s) 84
BaeI ACNNNNGTAYC 2 cut(s) 240, 273
BanI GGYRCC 1 cut(s) 151
BauI CACGAG 1 cut(s) 723
BbvI GCAGC 4 cut(s) 40, 78, 361, 364
BccI CCATC 2 cut(s) 433, 821
BceAI ACGGC 2 cut(s) 43, 745
BciT130I CCWGG 3 cut(s) 244, 819, 1446
BciVI GTATCC 2 cut(s) 691, 813
BcnI CCSGG 2 cut(s) 824, 1107
BcoDI GTCTC 7 cut(s) 370, 452, 513, 988, 1286, 1345, 1556
BfaI CTAG 2 cut(s) 108, 144
BfmI CTRYAG 1 cut(s) 206
BfoI RGCGCY 1 cut(s) 155
BfrI CTTAAG 1 cut(s) 509
BfuI GTATCC 2 cut(s) 691, 813
BglI GCCNNNNNGGC 1 cut(s) 1111
BglII AGATCT 1 cut(s) 1072
BisI GCNGC 5 cut(s) 29, 92, 150, 350, 353
BlsI GCNGC 5 cut(s) 30, 93, 151, 351, 354
Bme1390I CCNGG 5 cut(s) 244, 819, 824, 1107, 1446
BmeT110I CYCGRG 1 cut(s) 495
BmgT120I GGNCC 1 cut(s) 821
BmiI GGNNCC 1 cut(s) 153
BmrFI CCNGG 5 cut(s) 244, 819, 824, 1107, 1446
BmsI GCATC 4 cut(s) 319, 560, 610, 1290
BpuEI CTTGAG 1 cut(s) 753
BpuMI CCSGG 2 cut(s) 824, 1107
BsaHI GRCGYC 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 988
BsaJI CCNNGG 3 cut(s) 243, 1106, 1445
BsaWI WCCGGW 1 cut(s) 1050
Bsc4I CCNNNNNNNGG 1 cut(s) 12
Bse118I RCCGGY 2 cut(s) 412, 1050
Bse1I ACTGG 4 cut(s) 206, 384, 535, 633
Bse3DI GCAATG 1 cut(s) 1310
BseBI CCWGG 3 cut(s) 244, 819, 1446
BseDI CCNNGG 3 cut(s) 243, 1106, 1445
BseGI GGATG 7 cut(s) 400, 551, 622, 718, 832, 1504, 1558
BseLI CCNNNNNNNGG 1 cut(s) 12
BseMI GCAATG 1 cut(s) 1310
BseMII CTCAG 4 cut(s) 33, 420, 479, 1261
BseNI ACTGG 4 cut(s) 206, 384, 535, 633
BseRI GAGGAG 1 cut(s) 788
BseSI GKGCMC 1 cut(s) 84
BseXI GCAGC 4 cut(s) 40, 78, 361, 364
Bsh1236I CGCG 3 cut(s) 166, 296, 304
BshFI GGCC 3 cut(s) 242, 822, 1196
BshNI GGYRCC 1 cut(s) 151
BshTI ACCGGT 1 cut(s) 1050
BsiHKCI CYCGRG 1 cut(s) 495
BsiSI CCGG 4 cut(s) 413, 824, 1051, 1106
BslFI GGGAC 3 cut(s) 260, 277, 886
BslI CCNNNNNNNGG 1 cut(s) 12
BsmAI GTCTC 7 cut(s) 370, 452, 513, 988, 1286, 1345, 1556
BsmBI CGTCTC 2 cut(s) 452, 1286
BsmFI GGGAC 3 cut(s) 260, 277, 886
BsmI GAATGC 1 cut(s) 837
BsnI GGCC 3 cut(s) 242, 822, 1196
Bso31I GGTCTC 1 cut(s) 988
BsoBI CYCGRG 1 cut(s) 495
Bsp1286I GDGCHC 1 cut(s) 84
Bsp1407I TGTACA 1 cut(s) 1159
Bsp143I GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
BspACI CCGC 5 cut(s) 47, 149, 692, 1473, 1496
BspANI GGCC 3 cut(s) 242, 822, 1196
BspCNI CTCAG 4 cut(s) 32, 419, 478, 1260
BspFNI CGCG 3 cut(s) 166, 296, 304
BspHI TCATGA 1 cut(s) 1279
BspLI GGNNCC 1 cut(s) 153
BspPI GGATC 4 cut(s) 450, 644, 1368, 1457
BspT107I GGYRCC 1 cut(s) 151
BspTI CTTAAG 1 cut(s) 509
BspTNI GGTCTC 1 cut(s) 988
BsrDI GCAATG 1 cut(s) 1310
BsrFI RCCGGY 2 cut(s) 412, 1050
BsrGI TGTACA 1 cut(s) 1159
BsrI ACTGG 4 cut(s) 206, 384, 535, 633
BssAI RCCGGY 2 cut(s) 412, 1050
BssECI CCNNGG 3 cut(s) 243, 1106, 1445
BssMI GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
BssNAI GTATAC 1 cut(s) 765
BssNI GRCGYC 1 cut(s) 152
BssSI CACGAG 1 cut(s) 723
Bst1107I GTATAC 1 cut(s) 765
Bst2BI CACGAG 1 cut(s) 723
Bst2UI CCWGG 3 cut(s) 244, 819, 1446
Bst4CI ACNGT 2 cut(s) 584, 1297
BstACI GRCGYC 1 cut(s) 152
BstAFI CTTAAG 1 cut(s) 509
BstAPI GCANNNNNTGC 1 cut(s) 358
BstAUI TGTACA 1 cut(s) 1159
BstC8I GCNNGC 1 cut(s) 141
BstDEI CTNAG 7 cut(s) 19, 87, 406, 465, 657, 810, 1247
BstF5I GGATG 7 cut(s) 400, 551, 622, 718, 832, 1504, 1558
BstFNI CGCG 3 cut(s) 166, 296, 304
BstH2I RGCGCY 1 cut(s) 155
BstHHI GCGC 3 cut(s) 154, 168, 790
BstKTI GATC 7 cut(s) 294, 445, 494, 639, 1075, 1363, 1452
BstMAI GTCTC 7 cut(s) 370, 452, 513, 988, 1286, 1345, 1556
BstMBI GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
BstMWI GCNNNNNNNGC 4 cut(s) 88, 149, 358, 1111
BstNI CCWGG 3 cut(s) 244, 819, 1446
BstSCI CCNGG 5 cut(s) 242, 817, 822, 1105, 1444
BstSFI CTRYAG 1 cut(s) 206
BstSLI GKGCMC 1 cut(s) 84
BstUI CGCG 3 cut(s) 166, 296, 304
BstV1I GCAGC 4 cut(s) 40, 78, 361, 364
BstX2I RGATCY 1 cut(s) 1072
BstYI RGATCY 1 cut(s) 1072
BstZ17I GTATAC 1 cut(s) 765
BsuI GTATCC 2 cut(s) 691, 813
BsuRI GGCC 3 cut(s) 242, 822, 1196
BtgZI GCGATG 1 cut(s) 1027
BtsCI GGATG 7 cut(s) 400, 551, 622, 718, 832, 1504, 1558
BtsIMutI CAGTG 1 cut(s) 249
Cac8I GCNNGC 1 cut(s) 141
CciI TCATGA 1 cut(s) 1279
CfoI GCGC 3 cut(s) 154, 168, 790
Cfr10I RCCGGY 2 cut(s) 412, 1050
Cfr13I GGNCC 1 cut(s) 821
CseI GACGC 1 cut(s) 83
Csp6I GTAC 2 cut(s) 54, 1160
CspAI ACCGGT 1 cut(s) 1050
CviAII CATG 3 cut(s) 122, 1280, 1520
CviQI GTAC 2 cut(s) 54, 1160
DdeI CTNAG 7 cut(s) 19, 87, 406, 465, 657, 810, 1247
DinI GGCGCC 1 cut(s) 153
DpnI GATC 7 cut(s) 293, 444, 493, 638, 1074, 1362, 1451
DpnII GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
DraIII CACNNNGTG 1 cut(s) 12
Eco147I AGGCCT 1 cut(s) 242
Eco31I GGTCTC 1 cut(s) 988
Eco57I CTGAAG 2 cut(s) 890, 1416
Eco88I CYCGRG 1 cut(s) 495
EcoRI GAATTC 1 cut(s) 742
EcoRII CCWGG 3 cut(s) 242, 817, 1444
EcoT22I ATGCAT 1 cut(s) 312
EgeI GGCGCC 1 cut(s) 153
EheI GGCGCC 1 cut(s) 153
Esp3I CGTCTC 2 cut(s) 452, 1286
FaeI CATG 3 cut(s) 125, 1283, 1523
FalI AAGNNNNNCTT 2 cut(s) 419, 451
FaqI GGGAC 3 cut(s) 260, 277, 886
FatI CATG 3 cut(s) 121, 1279, 1519
FauI CCCGC 1 cut(s) 1480
FauNDI CATATG 2 cut(s) 947, 1222
FblI GTMKAC 1 cut(s) 764
Fnu4HI GCNGC 5 cut(s) 29, 92, 150, 350, 353
FokI GGATG 7 cut(s) 407, 538, 629, 705, 839, 1511, 1565
Fsp4HI GCNGC 5 cut(s) 29, 92, 150, 350, 353
FspBI CTAG 2 cut(s) 108, 144
GlaI GCGC 3 cut(s) 153, 167, 789
GluI GCNGC 5 cut(s) 29, 92, 150, 350, 353
HaeII RGCGCY 1 cut(s) 155
HaeIII GGCC 3 cut(s) 242, 822, 1196
HapII CCGG 4 cut(s) 413, 824, 1051, 1106
HgaI GACGC 1 cut(s) 83
HhaI GCGC 3 cut(s) 154, 168, 790
Hin1I GRCGYC 1 cut(s) 152
Hin1II CATG 3 cut(s) 125, 1283, 1523
Hin6I GCGC 3 cut(s) 152, 166, 788
HinP1I GCGC 3 cut(s) 152, 166, 788
HindIII AAGCTT 2 cut(s) 195, 474
HinfI GANTC 4 cut(s) 113, 571, 577, 1063
HpaII CCGG 4 cut(s) 413, 824, 1051, 1106
HphI GGTGA 7 cut(s) 244, 274, 790, 1074, 1309, 1330, 1362
Hpy166II GTNNAC 3 cut(s) 54, 300, 765
Hpy188I TCNGA 7 cut(s) 118, 409, 576, 676, 897, 988, 1077
Hpy188III TCNNGA 9 cut(s) 314, 467, 495, 640, 770, 974, 1249, 1280, 1418
Hpy8I GTNNAC 3 cut(s) 54, 300, 765
HpyAV CCTTC 4 cut(s) 229, 339, 541, 1391
HpyCH4III ACNGT 2 cut(s) 584, 1297
HpyCH4V TGCA 5 cut(s) 139, 310, 1004, 1303, 1549
HpyF10VI GCNNNNNNNGC 4 cut(s) 88, 149, 358, 1111
HpyF3I CTNAG 7 cut(s) 19, 87, 406, 465, 657, 810, 1247
Hsp92I GRCGYC 1 cut(s) 152
Hsp92II CATG 3 cut(s) 125, 1283, 1523
HspAI GCGC 3 cut(s) 152, 166, 788
KasI GGCGCC 1 cut(s) 151
Kzo9I GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
LmnI GCTCC 1 cut(s) 1429
Lsp1109I GCAGC 4 cut(s) 40, 78, 361, 364
LweI GCATC 4 cut(s) 319, 560, 610, 1290
MaeI CTAG 2 cut(s) 108, 144
MaeIII GTNAC 9 cut(s) 22, 280, 499, 533, 640, 727, 880, 1440, 1460
MalI GATC 7 cut(s) 293, 444, 493, 638, 1074, 1362, 1451
MboI GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
MboII GAAGA 6 cut(s) 92, 301, 395, 439, 482, 896
MfeI CAATTG 2 cut(s) 749, 999
MflI RGATCY 1 cut(s) 1072
MhlI GDGCHC 1 cut(s) 84
MluI ACGCGT 1 cut(s) 302
Mly113I GGCGCC 1 cut(s) 152
MmeI TCCRAC 2 cut(s) 874, 1509
Mph1103I ATGCAT 1 cut(s) 312
MroXI GAANNNNTTC 1 cut(s) 714
MseI TTAA 5 cut(s) 389, 510, 933, 1479, 1567
MslI CAYNNNNRTG 3 cut(s) 659, 723, 1133
MspCI CTTAAG 1 cut(s) 509
MspI CCGG 4 cut(s) 413, 824, 1051, 1106
MspR9I CCNGG 5 cut(s) 244, 819, 824, 1107, 1446
MunI CAATTG 2 cut(s) 749, 999
Mva1269I GAATGC 1 cut(s) 837
MvaI CCWGG 3 cut(s) 244, 819, 1446
MvnI CGCG 3 cut(s) 166, 296, 304
MwoI GCNNNNNNNGC 4 cut(s) 88, 149, 358, 1111
NarI GGCGCC 1 cut(s) 152
NciI CCSGG 2 cut(s) 824, 1107
NdeI CATATG 2 cut(s) 947, 1222
NdeII GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
NlaIII CATG 3 cut(s) 125, 1283, 1523
NlaIV GGNNCC 1 cut(s) 153
NmuCI GTSAC 5 cut(s) 280, 499, 640, 880, 1460
NsiI ATGCAT 1 cut(s) 312
PaeR7I CTCGAG 1 cut(s) 495
PagI TCATGA 1 cut(s) 1279
PceI AGGCCT 1 cut(s) 242
PctI GAATGC 1 cut(s) 837
PdmI GAANNNNTTC 1 cut(s) 714
PfeI GAWTC 4 cut(s) 113, 571, 577, 1063
PflMI CCANNNNNTGG 1 cut(s) 12
PinAI ACCGGT 1 cut(s) 1050
PkrI GCNGC 5 cut(s) 30, 93, 151, 351, 354
PluTI GGCGCC 1 cut(s) 155
PshBI ATTAAT 2 cut(s) 389, 933
Psp6I CCWGG 3 cut(s) 242, 817, 1444
PspGI CCWGG 3 cut(s) 242, 817, 1444
PspN4I GGNNCC 1 cut(s) 153
PspPI GGNCC 1 cut(s) 821
PsuI RGATCY 1 cut(s) 1072
RsaI GTAC 2 cut(s) 55, 1161
RsaNI GTAC 2 cut(s) 54, 1160
RseI CAYNNNNRTG 3 cut(s) 659, 723, 1133
SaqAI TTAA 5 cut(s) 389, 510, 933, 1479, 1567
SatI GCNGC 5 cut(s) 29, 92, 150, 350, 353
Sau3AI GATC 7 cut(s) 291, 442, 491, 636, 1072, 1360, 1449
Sau96I GGNCC 1 cut(s) 821
ScrFI CCNGG 5 cut(s) 244, 819, 824, 1107, 1446
SduI GDGCHC 1 cut(s) 84
SfaNI GCATC 4 cut(s) 319, 560, 610, 1290
SfcI CTRYAG 1 cut(s) 206
SfoI GGCGCC 1 cut(s) 153
Sfr274I CTCGAG 1 cut(s) 495
SlaI CTCGAG 1 cut(s) 495
SmiMI CAYNNNNRTG 3 cut(s) 659, 723, 1133
SmlI CTYRAG 3 cut(s) 495, 509, 768
SmoI CTYRAG 3 cut(s) 495, 509, 768
SseBI AGGCCT 1 cut(s) 242
SsiI CCGC 5 cut(s) 47, 149, 692, 1473, 1496
SspDI GGCGCC 1 cut(s) 151
SspI AATATT 2 cut(s) 456, 1325
SspMI CTAG 2 cut(s) 108, 144
StuI AGGCCT 1 cut(s) 242
StyD4I CCNGG 5 cut(s) 242, 817, 822, 1105, 1444
TaaI ACNGT 2 cut(s) 584, 1297
TaqI TCGA 4 cut(s) 496, 925, 1034, 1452
TatI WGTACW 1 cut(s) 1159
TauI GCSGC 1 cut(s) 152
TfiI GAWTC 4 cut(s) 113, 571, 577, 1063
Tru1I TTAA 5 cut(s) 389, 510, 933, 1479, 1567
Tru9I TTAA 5 cut(s) 389, 510, 933, 1479, 1567
TscAI CASTG 1 cut(s) 256
TseFI GTSAC 5 cut(s) 280, 499, 640, 880, 1460
TseI GCWGC 4 cut(s) 28, 91, 349, 352
Tsp45I GTSAC 5 cut(s) 280, 499, 640, 880, 1460
TspDTI ATGAA 6 cut(s) 530, 609, 636, 707, 755, 1274
TspRI CASTG 1 cut(s) 256
Van91I CCANNNNNTGG 1 cut(s) 12
Vha464I CTTAAG 1 cut(s) 509
VspI ATTAAT 2 cut(s) 389, 933
XapI RAATTY 1 cut(s) 742
XhoI CTCGAG 1 cut(s) 495
XmiI GTMKAC 1 cut(s) 764
XmnI GAANNNNTTC 1 cut(s) 714
XspI CTAG 2 cut(s) 108, 144
Zsp2I ATGCAT 1 cut(s) 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.