FvH4_6g48170

ADP binding

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
36328390 .. 36334905
6516 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g48170.t1

Sequence Viewer

Length: 3150 bp
ATGGTAGTTGAATCAGTGCTCACTTTCGCTGCTGAGGGGATTCTGAGCAAGGTGTCTTCTCTTGCCGCTAACAAAATTGCTCTTGCATGGGGGTTCAAGGCCGAACTGGAGAAGCTCAGACAGTCCTTATCCTACATTCAAGATTTATTAGGCAGTGCTGCGGATCAGAGACTAGATGATCGGGGCAAGGCAGTAGAGGAATGGGTCAAGAAACTTAAACAGGTAGCTGAAGACGCAGATGATGTTTTGGATGAGTTCGAGTATGAACTTCTCCGACAACAAGTGGAGCTGCGAAACGACATGGTGTTTCCGCAGAAGATGTTTTGCAGAAAGGTACTCAACTTCCTTTCTGCCTCCAATCCTCTTTGGTTTCGTTTCAATCTGGCGCATAAGATTAAGAAGATCAATGATTCTCTGGTGGAGCTTAAGAATGAGGCACCTGCAATCATCTTGGTTGCCAAAAAAGGAGATTCAAGGCGACGACCAGATCGAGTGCAAACTGATGCATTTTTTGAGATTGAGAATGGTGAAAAAGAAAAAGTTGTTGGAAGGGAAGACGCTGTGAGAAAGATAGTTACGACGTTGATCAGCTCCGACAATCAGCAGAAGAATCTTTCAGTTATGGCCATTGTGGGAATGGCTGGCCTGGGGAAGACTACTTTGGCTAAATCAGTGTACAATGAACCTGACATAGATAAACACTTCGATAAAAGAATATGGGTGTGTGTGTCTAACACTTTTGAAGTGTTTACGATTTTAAGTCAGATGGTAGACACTGTAGTACCTGAAAAGGCTGGAATGAAATGCCAAAATGCAATTCTTGAAGCTCTGAGAGAGAAGCTAACAGGGAAGAGATATCTTCTGGTGCTCGATGATGTTTGGAATAAAGAGAAGGAAAAGTGGGATAGCTTGATGAGTTGTTTGTCAAAGCTGAATTCTAAACCCGGAAGCTGCATTATCGTCACCACCCGTAGCACCAATGTGTCAACTATTGCTGAAACACTCCCCAGACCTGAGTTGACAAAGCTATCAGAGGAGGATTGTTGGTCCATTATAAAGCAAAGAGCTTTAAAAGACGAAAATGATGCAGAACTAGAAAGAATTGGGAGGGAGATTGCTGAGAAGTGTGGAGGGGTACCCTTGGTTGCAAAGGTTTTGGGAAGCCTACTGCGCTCAAAAGCTAGTGAAGTTGCTGCAAGACCTAGTACAGTTGCTGAATGGTCGTCAATTCGAGACAATAGATTATGGGACCTACGTGAAGGGGAGGACAGGATCATGAAGGTATTGAAGTTGAGTTTTGATAATCTGGAGCCATCGCCATTGAAACAATGTTTTGCATATTGCTCAATGTTGAGAAAAGATTTCGAAATTGAAAGAGATAATTTGATCCAGCTTTGGATGGCTCAAGGATTACTCCAGACTTCAACTGTAGAAAATCATCATGTGATGGAGGATACTGGCAAAGAGTATTTTAACATTCTACTAAACAATTCCTTAATTCAAAAGGTAATTGAAAGAGGCACTATTACGAAGTACACAATGCACGATCTTGTGCATGATCTTGCAGAAAAAGTGTCCAAAAGTGAGCGCTTGACACAGGAGTTGAATGATGATGTTCGACATGTTGCACGTAGTCGACCTCCTTCAACACTAGAAAACATGTCAGAAGTAACTGTTGGGAGATTGCGCTCACTATTTTCAAATGACCAGGTCCCAGATATCGTTTCCTCCAAGTTCAAAGCAATGCGGGTCTTAAGTTTTGATACAGCAGATATAAAAGAGTTGCCAAAGTCATTTGGCAAGCTGAAGCACTTGAGATATCTAGACCTCTCAGATACAGGAATCAAAGCACTTCCCAAGTCAATTGGCAAGCTCTATAACCTTCAAACATTGCGGATGCAGAATTGTGATATGAACGAGCTTCCAAGGGAGATGCAAAACTTGATCAACTTGAGGAATCTCGTCCTAGATCGCTGTAGCGAATGTGAAGAACTCCCGATACTAGGCCATCTACCGTTCCTTAGAGATGTGAAGATAAAGGGTATGCATAACCTAAAACGCATTGGAAGTGAAATTTATGGTTATGACCTTGTTTACGAGGCTACACGAGAGAAGGAGACGATAGTCTTATTTCCAGCACTAAAAACATTAAGCATTTCCTACTGCCTTGAGCTAATTGAATGGATGGAAGCACCCACAACGACGATGACAAAAGTAGAGGTGTTCCCTTGCTTGGAGGAGTTGACGATACTATGTTGTCCAAGAATTGGGTTCATTCCAATTCCCTGCAGCATGGCATCCCTCCGCGAACTGCGGATTGAATGGTGTGATGCATTATCTAGTATTGGCCAACTCGATCATTGCACCTCTCTACAGGAATTGGAGATTAACAGCTGTGAAGCATTATCTAGTATTGGCCTAGAGGGCCTTTCATCCCTCCGCAAACTGCGGATTGAAAGGTGTGATGCATTATCTAGTATTGGCCAACTCGATCATTGCACCTCTCTACAGGAATTGGAGATTAAATACTGTATTGCATTATCTAGTATTGGCCTAGAGGGCCTTTCATCCCTCCGCGAACTGCGGATTTACAGCTGTGATGCATTATTTAGTATTGGCCAACTCGATCATTGCACCTCTCTACAGGAATTGGAGATTAAATACTGTATTGCATTATCTAGTATTGGCCTAGATCGCCTTTCATCCCTCCGCGAACTGCAGATTTACAGCTGTGATGCATTATCTAGTATTGGCCAACTCGATCATTGCACCTCTCTACAGAAACTGTGGATTTTTAGCTGTGATGCATTATCTAGTATTGGCCAACTCGATCATTGCACCTCTCTACAGGAACTGTGGATTTTTAGCTGTGATGCATTATCTAGTATTGGCCAACTCGATCATTGCACCTCTCTACAGGAATTGGAGATTAAATACTGTATTGCATTATCTAGTATTGGCCTAGAGGGCCTTTCATCCCTCCGCGAACTGCAGATTGTCGGCTGTAAGGCATTATCTAGTATTGGCCCAACATCCTCACAGGGCCTTCCATCTCTCCGGGAATTGATTATTGTATTCTGTGATGGATTATCAGCCCTTCCGAGCGGGATTGAAAACTGCTATTACATGTATACAGATGCGATAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1050

Amino Acids

118.22

Weight (kDa)

5.47

Isoelectric Point (pI)

47.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 98 7.7e-20 Rx N-terminal domain
NB-ARC PF00931 185 - 359 2.1e-38 NB-ARC domain
NACHT PF05729 207 - 350 8e-08 NACHT domain
WHD_DRP PF23559 453 - 522 3.4e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 562 - 682 6.2e-20 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 627 - 682 4.1e-08 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1055
AarI CACCTGC 1 cut(s) 448
Acc36I ACCTGC 1 cut(s) 448
Acc65I GGTACC 1 cut(s) 1135
AccB1I GGYRCC 2 cut(s) 436, 1135
AccB7I CCANNNNNTGG 1 cut(s) 2267
AccBSI CCGCTC 1 cut(s) 3105
AccI GTMKAC 3 cut(s) 771, 1636, 3131
AccII CGCG 4 cut(s) 2307, 2577, 2712, 2985
AclWI GGATC 3 cut(s) 171, 1280, 1381
AcoI YGGCCR 7 cut(s) 624, 2347, 2482, 2617, 2752, 2821, 2890
AcsI RAATTY 2 cut(s) 934, 2073
AcuI CTGAAG 2 cut(s) 249, 1826
AfaI GTAC 6 cut(s) 336, 677, 783, 1137, 1207, 1535
AfeI AGCGCT 1 cut(s) 1589
AfiI CCNNNNNNNGG 3 cut(s) 2003, 2233, 2267
AflII CTTAAG 2 cut(s) 425, 1753
AflIII ACRYGT 3 cut(s) 1621, 1659, 3126
AjnI CCWGG 2 cut(s) 645, 1707
AjuI GAANNNNNNNTTGG 8 cut(s) 528, 560, 644, 676, 801, 833, 1659, 1691
AleI CACNNNNGTG 1 cut(s) 980
Alw21I GWGCWC 2 cut(s) 21, 870
Alw26I GTCTC 3 cut(s) 163, 1227, 2111
AlwI GGATC 3 cut(s) 171, 1280, 1381
AlwNI CAGNNNCTG 3 cut(s) 1214, 2785, 2854
Aor51HI AGCGCT 1 cut(s) 1589
ApeKI GCWGC 6 cut(s) 29, 158, 289, 951, 1193, 2289
ApoI RAATTY 2 cut(s) 934, 2073
Asp718I GGTACC 1 cut(s) 1135
AspLEI GCGC 4 cut(s) 388, 1173, 1590, 1689
AspS9I GGNCC 8 cut(s) 1047, 1249, 1711, 2425, 2560, 2968, 3026, 3043
AsuC2I CCSGG 2 cut(s) 945, 3059
AsuHPI GGTGA 2 cut(s) 539, 955
AsuII TTCGAA 1 cut(s) 1365
AvaII GGWCC 3 cut(s) 1047, 1249, 1711
BaeI ACNNNNGTAYC 2 cut(s) 765, 798
BalI TGGCCA 7 cut(s) 626, 2349, 2484, 2619, 2754, 2823, 2892
BanI GGYRCC 2 cut(s) 436, 1135
BauI CACGAG 1 cut(s) 2106
BbsI GAAGAC 4 cut(s) 48, 237, 561, 659
Bbv12I GWGCWC 2 cut(s) 21, 870
BbvCI CCTCAGC 1 cut(s) 33
BbvI GCAGC 6 cut(s) 16, 145, 276, 938, 1180, 2301
BccI CCATC 8 cut(s) 760, 1321, 1393, 1441, 2016, 2179, 3058, 3077
BcgI CGANNNNNNTGC 2 cut(s) 1067, 1101
BciT130I CCWGG 2 cut(s) 647, 1709
BciVI GTATCC 1 cut(s) 1447
BclI TGATCA 2 cut(s) 585, 1944
BcnI CCSGG 2 cut(s) 945, 3059
BcoDI GTCTC 3 cut(s) 163, 1227, 2111
BfoI RGCGCY 1 cut(s) 1591
BfrI CTTAAG 2 cut(s) 425, 1753
BfuAI ACCTGC 1 cut(s) 448
BfuI GTATCC 1 cut(s) 1447
BglI GCCNNNNNGGC 3 cut(s) 2424, 2559, 2967
BisI GCNGC 7 cut(s) 30, 66, 159, 290, 952, 1194, 2290
BlsI GCNGC 7 cut(s) 31, 67, 160, 291, 953, 1195, 2291
Bme1390I CCNGG 4 cut(s) 647, 945, 1709, 3059
Bme18I GGWCC 3 cut(s) 1047, 1249, 1711
BmgT120I GGNCC 8 cut(s) 1047, 1249, 1711, 2425, 2560, 2968, 3026, 3043
BmiI GGNNCC 5 cut(s) 438, 1137, 1250, 1311, 1713
BmrFI CCNGG 4 cut(s) 647, 945, 1709, 3059
BoxI GACNNNNGTC 1 cut(s) 2123
BpiI GAAGAC 4 cut(s) 48, 237, 561, 659
BpmI CTGGAG 3 cut(s) 128, 1328, 1400
Bpu10I CCTNAGC 1 cut(s) 33
Bpu14I TTCGAA 1 cut(s) 1365
BpuEI CTTGAG 4 cut(s) 1389, 1834, 1972, 2189
BpuMI CCSGG 2 cut(s) 945, 3059
BsaAI YACGTR 2 cut(s) 1256, 1631
BsaJI CCNNGG 3 cut(s) 646, 1140, 1925
Bsc4I CCNNNNNNNGG 3 cut(s) 2003, 2233, 2267
Bse1I ACTGG 2 cut(s) 111, 1462
Bse3DI GCAATG 8 cut(s) 1749, 1889, 2359, 2494, 2629, 2764, 2833, 2902
BseBI CCWGG 2 cut(s) 647, 1709
BseDI CCNNGG 3 cut(s) 646, 1140, 1925
BseLI CCNNNNNNNGG 3 cut(s) 2003, 2233, 2267
BseMI GCAATG 8 cut(s) 1749, 1889, 2359, 2494, 2629, 2764, 2833, 2902
BseMII CTCAG 7 cut(s) 24, 35, 130, 821, 1005, 1110, 1845
BseNI ACTGG 2 cut(s) 111, 1462
BseRI GAGGAG 2 cut(s) 1049, 2252
BseXI GCAGC 6 cut(s) 16, 145, 276, 938, 1180, 2301
Bsh1236I CGCG 4 cut(s) 2307, 2577, 2712, 2985
BshNI GGYRCC 2 cut(s) 436, 1135
BsiHKAI GWGCWC 2 cut(s) 21, 870
BsiSI CCGG 2 cut(s) 945, 3058
BslFI GGGAC 2 cut(s) 1262, 1697
BslI CCNNNNNNNGG 3 cut(s) 2003, 2233, 2267
BsmAI GTCTC 3 cut(s) 163, 1227, 2111
BsmBI CGTCTC 1 cut(s) 2111
BsmFI GGGAC 2 cut(s) 1262, 1697
Bsp119I TTCGAA 1 cut(s) 1365
Bsp1286I GDGCHC 2 cut(s) 21, 870
Bsp1407I TGTACA 1 cut(s) 675
BspCNI CTCAG 7 cut(s) 25, 36, 129, 822, 1006, 1111, 1844
BspFNI CGCG 4 cut(s) 2307, 2577, 2712, 2985
BspHI TCATGA 1 cut(s) 1275
BspLI GGNNCC 5 cut(s) 438, 1137, 1250, 1311, 1713
BspMAI CTGCAG 3 cut(s) 2291, 2721, 2994
BspMI ACCTGC 1 cut(s) 448
BspPI GGATC 3 cut(s) 171, 1280, 1381
BspT104I TTCGAA 1 cut(s) 1365
BspT107I GGYRCC 2 cut(s) 436, 1135
BspTI CTTAAG 2 cut(s) 425, 1753
BsrBI CCGCTC 1 cut(s) 3105
BsrDI GCAATG 8 cut(s) 1749, 1889, 2359, 2494, 2629, 2764, 2833, 2902
BsrGI TGTACA 1 cut(s) 675
BsrI ACTGG 2 cut(s) 111, 1462
BssECI CCNNGG 3 cut(s) 646, 1140, 1925
BssNAI GTATAC 1 cut(s) 3132
BssSI CACGAG 1 cut(s) 2106
BssT1I CCWWGG 2 cut(s) 1140, 1925
Bst1107I GTATAC 1 cut(s) 3132
Bst2BI CACGAG 1 cut(s) 2106
Bst2UI CCWGG 2 cut(s) 647, 1709
Bst6I CTCTTC 1 cut(s) 845
BstAFI CTTAAG 2 cut(s) 425, 1753
BstAUI TGTACA 1 cut(s) 675
BstBAI YACGTR 2 cut(s) 1256, 1631
BstBI TTCGAA 1 cut(s) 1365
BstC8I GCNNGC 3 cut(s) 643, 1802, 1871
BstDEI CTNAG 8 cut(s) 33, 44, 116, 830, 1014, 1119, 1831, 2021
BstFNI CGCG 4 cut(s) 2307, 2577, 2712, 2985
BstH2I RGCGCY 1 cut(s) 1591
BstHHI GCGC 4 cut(s) 388, 1173, 1590, 1689
BstMAI GTCTC 3 cut(s) 163, 1227, 2111
BstMWI GCNNNNNNNGC 6 cut(s) 233, 1170, 2424, 2559, 2694, 2967
BstNI CCWGG 2 cut(s) 647, 1709
BstNSI RCATGY 3 cut(s) 1625, 1663, 3130
BstPAI GACNNNNGTC 1 cut(s) 2123
BstSCI CCNGG 4 cut(s) 645, 943, 1707, 3057
BstUI CGCG 4 cut(s) 2307, 2577, 2712, 2985
BstV1I GCAGC 6 cut(s) 16, 145, 276, 938, 1180, 2301
BstV2I GAAGAC 4 cut(s) 48, 237, 561, 659
BstZ17I GTATAC 1 cut(s) 3132
BsuI GTATCC 1 cut(s) 1447
BtgZI GCGATG 1 cut(s) 1299
BtsI GCAGTG 1 cut(s) 160
BtsIMutI CAGTG 4 cut(s) 21, 160, 678, 774
BveI ACCTGC 1 cut(s) 448
Cac8I GCNNGC 3 cut(s) 643, 1802, 1871
CaiI CAGNNNCTG 3 cut(s) 1214, 2785, 2854
CciI TCATGA 1 cut(s) 1275
CfoI GCGC 4 cut(s) 388, 1173, 1590, 1689
Cfr13I GGNCC 8 cut(s) 1047, 1249, 1711, 2425, 2560, 2968, 3026, 3043
CseI GACGC 2 cut(s) 242, 566
CsiI ACCWGGT 1 cut(s) 1707
Csp6I GTAC 6 cut(s) 335, 676, 782, 1136, 1206, 1534
CviAII CATG 9 cut(s) 87, 301, 1276, 1442, 1556, 1622, 1660, 2293, 3127
CviQI GTAC 6 cut(s) 335, 676, 782, 1136, 1206, 1534
DdeI CTNAG 8 cut(s) 33, 44, 116, 830, 1014, 1119, 1831, 2021
DraI TTTAAA 1 cut(s) 1071
EaeI YGGCCR 7 cut(s) 624, 2347, 2482, 2617, 2752, 2821, 2890
Eam1104I CTCTTC 1 cut(s) 845
EarI CTCTTC 1 cut(s) 845
Eco130I CCWWGG 2 cut(s) 1140, 1925
Eco32I GATATC 3 cut(s) 857, 1720, 1820
Eco47I GGWCC 3 cut(s) 1047, 1249, 1711
Eco47III AGCGCT 1 cut(s) 1589
Eco57I CTGAAG 2 cut(s) 249, 1826
EcoO109I RGGNCCY 6 cut(s) 1249, 1711, 2425, 2560, 2968, 3043
EcoRI GAATTC 1 cut(s) 934
EcoRII CCWGG 2 cut(s) 645, 1707
EcoRV GATATC 3 cut(s) 857, 1720, 1820
EcoT14I CCWWGG 2 cut(s) 1140, 1925
EcoT22I ATGCAT 8 cut(s) 508, 2049, 2335, 2470, 2605, 2740, 2809, 2878
ErhI CCWWGG 2 cut(s) 1140, 1925
Esp3I CGTCTC 1 cut(s) 2111
FaeI CATG 9 cut(s) 90, 304, 1279, 1445, 1559, 1625, 1663, 2296, 3130
FaqI GGGAC 2 cut(s) 1262, 1697
FatI CATG 9 cut(s) 86, 300, 1275, 1441, 1555, 1621, 1659, 2292, 3126
FauI CCCGC 2 cut(s) 1740, 3098
FbaI TGATCA 2 cut(s) 585, 1944
FblI GTMKAC 3 cut(s) 771, 1636, 3131
Fnu4HI GCNGC 7 cut(s) 30, 66, 159, 290, 952, 1194, 2290
Fsp4HI GCNGC 7 cut(s) 30, 66, 159, 290, 952, 1194, 2290
GlaI GCGC 4 cut(s) 387, 1172, 1589, 1688
GluI GCNGC 7 cut(s) 30, 66, 159, 290, 952, 1194, 2290
GsuI CTGGAG 3 cut(s) 128, 1328, 1400
HaeII RGCGCY 1 cut(s) 1591
HapII CCGG 2 cut(s) 945, 3058
HgaI GACGC 2 cut(s) 242, 566
HhaI GCGC 4 cut(s) 388, 1173, 1590, 1689
Hin1II CATG 9 cut(s) 90, 304, 1279, 1445, 1559, 1625, 1663, 2296, 3130
Hin6I GCGC 4 cut(s) 386, 1171, 1588, 1687
HinP1I GCGC 4 cut(s) 386, 1171, 1588, 1687
HincII GTYRAC 4 cut(s) 987, 1020, 1637, 2244
HindII GTYRAC 4 cut(s) 987, 1020, 1637, 2244
HinfI GANTC 7 cut(s) 11, 40, 410, 470, 610, 1842, 1957
HpaII CCGG 2 cut(s) 945, 3058
HphI GGTGA 2 cut(s) 539, 955
Hpy188III TCNNGA 9 cut(s) 140, 208, 821, 1232, 1276, 1307, 1417, 1823, 1996
Hpy99I CGWCG 3 cut(s) 483, 583, 2206
HpyAV CCTTC 9 cut(s) 543, 886, 1253, 1273, 1653, 1892, 2107, 3056, 3107
HpyCH4IV ACGT 3 cut(s) 581, 1255, 1630
HpyF10VI GCNNNNNNNGC 6 cut(s) 233, 1170, 2424, 2559, 2694, 2967
HpyF3I CTNAG 8 cut(s) 33, 44, 116, 830, 1014, 1119, 1831, 2021
HpySE526I ACGT 3 cut(s) 581, 1255, 1630
Hsp92II CATG 9 cut(s) 90, 304, 1279, 1445, 1559, 1625, 1663, 2296, 3130
HspAI GCGC 4 cut(s) 386, 1171, 1588, 1687
KpnI GGTACC 1 cut(s) 1139
Ksp22I TGATCA 2 cut(s) 585, 1944
LmnI GCTCC 4 cut(s) 286, 421, 596, 1309
Lsp1109I GCAGC 6 cut(s) 16, 145, 276, 938, 1180, 2301
MabI ACCWGGT 1 cut(s) 1707
MaeII ACGT 3 cut(s) 581, 1255, 1630
MaeIII GTNAC 3 cut(s) 574, 961, 1669
MbiI CCGCTC 1 cut(s) 3105
MfeI CAATTG 1 cut(s) 1863
MhlI GDGCHC 2 cut(s) 21, 870
MlsI TGGCCA 7 cut(s) 626, 2349, 2484, 2619, 2754, 2823, 2892
MluNI TGGCCA 7 cut(s) 626, 2349, 2484, 2619, 2754, 2823, 2892
MmeI TCCRAC 3 cut(s) 298, 526, 618
Mox20I TGGCCA 7 cut(s) 626, 2349, 2484, 2619, 2754, 2823, 2892
Mph1103I ATGCAT 8 cut(s) 508, 2049, 2335, 2470, 2605, 2740, 2809, 2878
MscI TGGCCA 7 cut(s) 626, 2349, 2484, 2619, 2754, 2823, 2892
MslI CAYNNNNRTG 1 cut(s) 980
Msp20I TGGCCA 7 cut(s) 626, 2349, 2484, 2619, 2754, 2823, 2892
MspA1I CMGCKG 3 cut(s) 2394, 2595, 2730
MspCI CTTAAG 2 cut(s) 425, 1753
MspI CCGG 2 cut(s) 945, 3058
MspR9I CCNGG 4 cut(s) 647, 945, 1709, 3059
MunI CAATTG 1 cut(s) 1863
MvaI CCWGG 2 cut(s) 647, 1709
MvnI CGCG 4 cut(s) 2307, 2577, 2712, 2985
MwoI GCNNNNNNNGC 6 cut(s) 233, 1170, 2424, 2559, 2694, 2967
NciI CCSGG 2 cut(s) 945, 3059
NlaIII CATG 9 cut(s) 90, 304, 1279, 1445, 1559, 1625, 1663, 2296, 3130
NlaIV GGNNCC 5 cut(s) 438, 1137, 1250, 1311, 1713
NmuCI GTSAC 1 cut(s) 961
NsiI ATGCAT 8 cut(s) 508, 2049, 2335, 2470, 2605, 2740, 2809, 2878
NspI RCATGY 3 cut(s) 1625, 1663, 3130
NspV TTCGAA 1 cut(s) 1365
OliI CACNNNNGTG 1 cut(s) 980
PagI TCATGA 1 cut(s) 1275
PaqCI CACCTGC 1 cut(s) 448
PciI ACATGT 3 cut(s) 1621, 1659, 3126
PcsI WCGNNNNNNNCGW 1 cut(s) 487
PfeI GAWTC 7 cut(s) 11, 40, 410, 470, 610, 1842, 1957
PflFI GACNNNGTC 1 cut(s) 1709
PflMI CCANNNNNTGG 1 cut(s) 2267
PfoI TCCNGGA 1 cut(s) 3057
PkrI GCNGC 7 cut(s) 31, 67, 160, 291, 953, 1195, 2291
Ppu21I YACGTR 2 cut(s) 1256, 1631
PpuMI RGGWCCY 2 cut(s) 1249, 1711
PscI ACATGT 3 cut(s) 1621, 1659, 3126
PshAI GACNNNNGTC 1 cut(s) 2123
PsiI TTATAA 1 cut(s) 1055
Psp5II RGGWCCY 2 cut(s) 1249, 1711
Psp6I CCWGG 2 cut(s) 645, 1707
PspGI CCWGG 2 cut(s) 645, 1707
PspN4I GGNNCC 5 cut(s) 438, 1137, 1250, 1311, 1713
PspPI GGNCC 8 cut(s) 1047, 1249, 1711, 2425, 2560, 2968, 3026, 3043
PspPPI RGGWCCY 2 cut(s) 1249, 1711
PsrI GAACNNNNNNTAC 2 cut(s) 1983, 2015
PstI CTGCAG 3 cut(s) 2291, 2721, 2994
PstNI CAGNNNCTG 3 cut(s) 1214, 2785, 2854
PsyI GACNNNGTC 1 cut(s) 1709
PvuII CAGCTG 3 cut(s) 2394, 2595, 2730
RsaI GTAC 6 cut(s) 336, 677, 783, 1137, 1207, 1535
RsaNI GTAC 6 cut(s) 335, 676, 782, 1136, 1206, 1534
RseI CAYNNNNRTG 1 cut(s) 980
SalI GTCGAC 1 cut(s) 1635
SatI GCNGC 7 cut(s) 30, 66, 159, 290, 952, 1194, 2290
Sau96I GGNCC 8 cut(s) 1047, 1249, 1711, 2425, 2560, 2968, 3026, 3043
ScrFI CCNGG 4 cut(s) 647, 945, 1709, 3059
SduI GDGCHC 2 cut(s) 21, 870
SexAI ACCWGGT 1 cut(s) 1707
SfiI GGCCNNNNNGGCC 3 cut(s) 2424, 2559, 2967
SfuI TTCGAA 1 cut(s) 1365
SinI GGWCC 3 cut(s) 1047, 1249, 1711
SmiMI CAYNNNNRTG 1 cut(s) 980
SmlI CTYRAG 6 cut(s) 425, 1404, 1753, 1813, 1951, 2168
SmoI CTYRAG 6 cut(s) 425, 1404, 1753, 1813, 1951, 2168
StyD4I CCNGG 4 cut(s) 645, 943, 1707, 3057
StyI CCWWGG 2 cut(s) 1140, 1925
TaiI ACGT 3 cut(s) 584, 1258, 1633
TatI WGTACW 3 cut(s) 675, 1205, 1533
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 7 cut(s) 11, 40, 410, 470, 610, 1842, 1957
TscAI CASTG 4 cut(s) 21, 160, 678, 781
TseFI GTSAC 1 cut(s) 961
TseI GCWGC 6 cut(s) 29, 158, 289, 951, 1193, 2289
Tsp45I GTSAC 1 cut(s) 961
TspRI CASTG 4 cut(s) 21, 160, 678, 781
Tth111I GACNNNGTC 1 cut(s) 1709
Van91I CCANNNNNTGG 1 cut(s) 2267
Vha464I CTTAAG 2 cut(s) 425, 1753
VpaK11BI GGWCC 3 cut(s) 1047, 1249, 1711
XapI RAATTY 2 cut(s) 934, 2073
XbaI TCTAGA 1 cut(s) 1822
XceI RCATGY 3 cut(s) 1625, 1663, 3130
XcmI CCANNNNNNNNNTGG 1 cut(s) 634
XmiI GTMKAC 3 cut(s) 771, 1636, 3131
Zsp2I ATGCAT 8 cut(s) 508, 2049, 2335, 2470, 2605, 2740, 2809, 2878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.