Rmu_ssc0000010.1_g000025

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000010.1
Physical Location & Seq
Forward (+)
110412 .. 115405
4994 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000010.1_g000025.1.cds

Sequence Viewer

Length: 3633 bp
atgtttgtactctctctccttgaatcctctgccggcgaagtagtgagtaaggtgacttcactcgctactgatcaattgagactcgatatcgtctgggggttccgcgaagagataaataagctcaaaaaatcctcaactctgattggaaatataatccatgatgctgctcatgaacctgaagatcggaaactgcgggcaaggggcgattggatgaagaggcttataagcgtagcttataatgctgacgatattctggatgaaatagaatatgaagttcagcgtatcgttataaaggagaccagcctggataagaagatactcggcttcttctgcaacaatcctgttgtatttcgtctcaagatggcacgtaagatttacaacatcaacacatccttggatgatctctacaagcaagcagccagtgtgggactcggcatgacaaggagatcaaatggaggtgcagcagcaagtaaagataagcgggaaacaacctcattcgttgagaaaaatgaattcaccttgaaagatgcaaccattgttggaagggatcaggttgtgtcagatataattgcaaccttgaccaactccaacaatcaagaaaatattctttcggtgatggccattgtgggattgggaggcctaggtaaaactactttggctcgctcagttaccaagcaactgaaagaaggtgaaatgaaaaggtactttgatgcaacattatgggtgtatgtatctaatacttttgatgtcaattcaattttacatcgaatgctggaatcatatgacgacgtgactggagcaaatctttcaagtctggaagcattgattggaagcctccagcagaagttgaaagagagaaggtattttcttgtacttgatgacgtttggaatgaggatgctaataattgggatgttttgaagcgttgtctattgcaactaaattctgctaaaggaagctctgtgattgtcaccacccgtagtgccaaggttgcatcaatcatggaaacacttcctaggtgcgatctagagactctatcggatgatgaatgttggtccataataaaggatagagcatttgcagatcctaatgctccgattccttcagatctagagggaatcggaagggacattgccaaaaagtgtgttggtcttccattggcggcaaaggttttgggaagtttgatgcgttctaagaatggtagcaatgaatggaagtcaattaaggaaagtaaagtgtggcaggtatcatcagacaaagaggatagcaggatcatgtcggttctgaggttgagttttgacaatttggaatcaccattgaaacaatgttttgcatattgcgccatgctcaagagaggttcctcaattgaaagagataacttgatccaactatggatggctcaaggttttctccatccttctcatggtcaccaaaccgagcaagagattgaaatggaggatataggcaataagtattttgagactctactagagaactccttgtttcaagatgctacaaaggatgaggatgactatggtgttatcatcacccgatgcaagatgcatgatcttgtgcatgatcttgcaaacgaagtatccaagtgtgaaagctggacatcagacctcaatcatgagatggaagatcatgagattcgacatgttgcacgggttcctactgcaatactagaaaagatgccaaaatcaagtatatcaagactgcgctcattcttttcaaatatcggggaggtctctaataccatttttccgaaatttagagctttacgtgtcttaagtttttgtgagactgagaatcaggagttgccatattcacttagcaagctgaagcacttgagatatctagaactttctgatgcaaaaatcaaagcactcccagagtctattggcaagctctataacctccaaacattgagattaccttggaatcttaaaaagtgtccgaaggtgattcaaaatttgatcaacttgaggcatttttactttggtgaggaaatgaaatttgaggctgggattttggggcgattgactaatctccgaagattgcccttctttaatgtgggtgaggagagaggtcccgcaattaaggagttgggtgggttgaaccaattgagaggccacttgattactattgggctagaacatgtaagggatggagaagaagcaaagaaggctggcttggtgcacaagagtcacttaagtcggttaacatttgcatggacagacaatgaggtacctaatgaaaaccagacggaggtactagatggcttggaacctcatggtaacttgcaaagcttgaacatttaccatttcatgggtgctagatttccgtcatggatatcagctgaaggaggagaggtcctgaaggtatttccttgcctcgaacagttgaggatatctagatgtcacagcctagagtcgattcggatcacactgggcatcgcatctctccgtcaattgaacatctggggctgtgagggattatcaaggctagaggttgggctcgattactgcacctctcttcttcaggagttgaatataagttgttgccctaatctggtttcaattccaaccacacagggcatgccgtctctccggaaattgaatattgaaagttgtgacggattgtcaagcctagggagtgggctcaactactgcacctctcttcaggaattggagatgagggattgtgatgaattgacatcaattccaatcacacagggcatcacatctctccgagaattgaagattgagagttgtgggagtttatttagcctaccgagtgggctccaattctgcacctctcttgaggatctggttataactgattgctctcatctagtatccttgtcagtatcatatgtgaagtgcaaccacccggaggaaatttctcaaggtgttgatgcgtatttgtctgtacccgaggaggattgccgttctgtagaatctattcttgctcggttgttggaattaaaatatgtgcccacagtaggatttcaccacctcactcgtttgaagacgctccgaattggtgcgttctgggaggagctggacgccttccctcattttcatcttcctcctaattcacaacttgaagagttatggttgtttgggtggcctaagctcgagtctctgccccaacaaattcagcacttgacttgtttaaaacagctctggataagtgattttaagggactagaggctcttcctgagtggttgggaaatcttacatctcttgagtctctgagaatctggttctgtgagaatctcaagtatctgcctacacaaaatgctatgaaaagcctcaccaaattaaacaagctccgcagtgacggatgtcccctgctcaaagaaagatgcaccaaggatactggcccagaatggcccaagatttctcacatcccagatcttcagtgtagagatgttcaatggcaattcttgttagtaaagtacctgccagacaatttcaaaccctcgtcgattcatttgtggttgtcagacaattgtgatccctccaacaatgatgtgaagaattacttaccgctgaatctagcaggaacctcaccatattactgcatctggaaattattggttttcaccatctatgtgaagttatgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1210

Amino Acids

137.12

Weight (kDa)

5.97

Isoelectric Point (pI)

46.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 224, 237, 290, 2834
Acc36I ACCTGC 2 cut(s) 1231, 3474
Acc65I GGTACC 1 cut(s) 2245
AccB1I GGYRCC 1 cut(s) 2245
AccB7I CCANNNNNTGG 1 cut(s) 2326
AccII CGCG 1 cut(s) 105
AccIII TCCGGA 1 cut(s) 2607
AciI CCGC 7 cut(s) 103, 193, 481, 1160, 2091, 3337, 3554
AclWI GGATC 7 cut(s) 555, 1076, 1277, 1375, 2447, 2832, 3515
AcoI YGGCCR 1 cut(s) 618
AcsI RAATTY 7 cut(s) 512, 940, 1766, 1969, 2012, 2898, 3156
AcuI CTGAAG 8 cut(s) 198, 1086, 1859, 2379, 2396, 2522, 2663, 3407
AcyI GRCGYC 1 cut(s) 3066
AfaI GTAC 7 cut(s) 9, 704, 873, 2247, 2271, 2931, 3464
AfiI CCNNNNNNNGG 6 cut(s) 1421, 2266, 2326, 2569, 2893, 3002
AflII CTTAAG 2 cut(s) 1786, 2209
AflIII ACRYGT 3 cut(s) 1654, 1780, 2155
AhdI GACNNNNNGTC 1 cut(s) 2638
AjiI CACGTC 1 cut(s) 790
AjnI CCWGG 1 cut(s) 303
AjuI GAANNNNNNNTTGG 4 cut(s) 810, 842, 2174, 2206
Alw21I GWGCWC 1 cut(s) 2199
Alw44I GTGCAC 1 cut(s) 2195
AlwI GGATC 7 cut(s) 555, 1076, 1277, 1375, 2447, 2832, 3515
Ama87I CYCGRG 2 cut(s) 2933, 3137
Aor13HI TCCGGA 1 cut(s) 2607
AoxI GGCC 6 cut(s) 618, 637, 2128, 3128, 3385, 3395
ApaLI GTGCAC 1 cut(s) 2195
ApeKI GCWGC 4 cut(s) 164, 416, 461, 464
ApoI RAATTY 7 cut(s) 512, 940, 1766, 1969, 2012, 2898, 3156
Asp700I GAANNNNTTC 3 cut(s) 603, 1008, 2961
Asp718I GGTACC 1 cut(s) 2245
AspA2I CCTAGG 3 cut(s) 640, 1013, 2647
AspLEI GCGC 2 cut(s) 1340, 1719
AspS9I GGNCC 5 cut(s) 1053, 2087, 2371, 3386, 3396
AsuC2I CCSGG 1 cut(s) 2891
AvaI CYCGRG 2 cut(s) 2933, 3137
AvaII GGWCC 3 cut(s) 1053, 2087, 2371
AvrII CCTAGG 3 cut(s) 640, 1013, 2647
BaeGI GKGCMC 2 cut(s) 2199, 2997
BalI TGGCCA 1 cut(s) 620
BanI GGYRCC 1 cut(s) 2245
BanII GRGCYC 3 cut(s) 2517, 2661, 2802
BarI GAAGNNNNNNTAC 2 cut(s) 40, 72
BbsI GAAGAC 2 cut(s) 1142, 3035
Bbv12I GWGCWC 1 cut(s) 2199
BbvI GCAGC 4 cut(s) 151, 428, 473, 476
BccI CCATC 8 cut(s) 355, 610, 1387, 1419, 1627, 2159, 2270, 3620
BceAI ACGGC 2 cut(s) 2584, 2931
BciT130I CCWGG 1 cut(s) 305
BciVI GTATCC 3 cut(s) 1603, 2866, 3373
BclI TGATCA 2 cut(s) 70, 1974
BcnI CCSGG 1 cut(s) 2891
BfmI CTRYAG 1 cut(s) 2952
BfrI CTTAAG 2 cut(s) 1786, 2209
BfuAI ACCTGC 2 cut(s) 1231, 3474
BfuI GTATCC 3 cut(s) 1603, 2866, 3373
BglII AGATCT 2 cut(s) 1105, 3418
BisI GCNGC 5 cut(s) 165, 417, 462, 465, 1161
BlnI CCTAGG 3 cut(s) 640, 1013, 2647
BlsI GCNGC 5 cut(s) 166, 418, 463, 466, 1162
Bme1390I CCNGG 2 cut(s) 305, 2891
Bme18I GGWCC 3 cut(s) 1053, 2087, 2371
BmeRI GACNNNNNGTC 1 cut(s) 2638
BmeT110I CYCGRG 2 cut(s) 2933, 3137
BmgBI CACGTC 1 cut(s) 790
BmgT120I GGNCC 5 cut(s) 1053, 2087, 2371, 3386, 3396
BmiI GGNNCC 8 cut(s) 101, 1357, 1668, 2089, 2247, 2286, 2801, 3571
BmrFI CCNGG 2 cut(s) 305, 2891
BmrI ACTGGG 1 cut(s) 2456
BmuI ACTGGG 1 cut(s) 2456
BoxI GACNNNNGTC 1 cut(s) 3348
BpiI GAAGAC 2 cut(s) 1142, 3035
BpmI CTGGAG 2 cut(s) 816, 821
Bpu10I CCTNAGC 1 cut(s) 3132
BpuEI CTTGAG 9 cut(s) 341, 1331, 1383, 1867, 2002, 2840, 2889, 3266, 3269
BpuMI CCSGG 1 cut(s) 2891
BsaAI YACGTR 2 cut(s) 368, 1781
BsaBI GATNNNNATC 1 cut(s) 2438
BsaHI GRCGYC 1 cut(s) 3066
BsaI GGTCTC 2 cut(s) 290, 1750
BsaJI CCNNGG 8 cut(s) 393, 640, 984, 1013, 1934, 2647, 2934, 3375
BsaWI WCCGGW 1 cut(s) 2607
BsaXI ACNNNNNCTCC 3 cut(s) 30, 2355, 2385
Bsc4I CCNNNNNNNGG 6 cut(s) 1421, 2266, 2326, 2569, 2893, 3002
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 4 cut(s) 420, 799, 2451, 3388
Bse3DI GCAATG 2 cut(s) 1128, 1210
Bse8I GATNNNNATC 1 cut(s) 2438
BseAI TCCGGA 1 cut(s) 2607
BseBI CCWGG 1 cut(s) 305
BseDI CCNNGG 8 cut(s) 393, 640, 984, 1013, 1934, 2647, 2934, 3375
BseJI GATNNNNATC 1 cut(s) 2438
BseLI CCNNNNNNNGG 6 cut(s) 1421, 2266, 2326, 2569, 2893, 3002
BseMI GCAATG 2 cut(s) 1128, 1210
BseMII CTCAG 5 cut(s) 678, 1274, 1794, 3213, 3248
BseNI ACTGG 4 cut(s) 420, 799, 2451, 3388
BseRI GAGGAG 4 cut(s) 2093, 2379, 2951, 3071
BseSI GKGCMC 2 cut(s) 2199, 2997
BseXI GCAGC 4 cut(s) 151, 428, 473, 476
BseYI CCCAGC 1 cut(s) 2021
BsgI GTGCAG 4 cut(s) 480, 2509, 2653, 2794
Bsh1236I CGCG 1 cut(s) 105
BshFI GGCC 6 cut(s) 620, 639, 2130, 3130, 3387, 3397
BshNI GGYRCC 1 cut(s) 2245
BsiHKAI GWGCWC 1 cut(s) 2199
BsiHKCI CYCGRG 2 cut(s) 2933, 3137
BsiSI CCGG 3 cut(s) 33, 2608, 2891
BslFI GGGAC 5 cut(s) 441, 1139, 2073, 3219, 3336
BslI CCNNNNNNNGG 6 cut(s) 1421, 2266, 2326, 2569, 2893, 3002
BsmBI CGTCTC 2 cut(s) 359, 2607
BsmFI GGGAC 5 cut(s) 441, 1139, 2073, 3219, 3336
BsmI GAATGC 1 cut(s) 774
BsnI GGCC 6 cut(s) 620, 639, 2130, 3130, 3387, 3397
Bso31I GGTCTC 2 cut(s) 290, 1750
BsoBI CYCGRG 2 cut(s) 2933, 3137
Bsp1286I GDGCHC 5 cut(s) 2199, 2517, 2661, 2802, 2997
Bsp13I TCCGGA 1 cut(s) 2607
BspACI CCGC 7 cut(s) 103, 193, 481, 1160, 2091, 3337, 3554
BspANI GGCC 6 cut(s) 620, 639, 2130, 3130, 3387, 3397
BspCNI CTCAG 5 cut(s) 677, 1275, 1795, 3214, 3249
BspEI TCCGGA 1 cut(s) 2607
BspFNI CGCG 1 cut(s) 105
BspHI TCATGA 3 cut(s) 169, 1627, 1642
BspLI GGNNCC 8 cut(s) 101, 1357, 1668, 2089, 2247, 2286, 2801, 3571
BspMI ACCTGC 2 cut(s) 1231, 3474
BspPI GGATC 7 cut(s) 555, 1076, 1277, 1375, 2447, 2832, 3515
BspQI GCTCTTC 1 cut(s) 3222
BspT107I GGYRCC 1 cut(s) 2245
BspTI CTTAAG 2 cut(s) 1786, 2209
BspTNI GGTCTC 2 cut(s) 290, 1750
BsrDI GCAATG 2 cut(s) 1128, 1210
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 4 cut(s) 420, 799, 2451, 3388
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 8 cut(s) 393, 640, 984, 1013, 1934, 2647, 2934, 3375
BssNI GRCGYC 1 cut(s) 3066
BssT1I CCWWGG 7 cut(s) 393, 640, 984, 1013, 1934, 2647, 3375
Bst2UI CCWGG 1 cut(s) 305
Bst4CI ACNGT 2 cut(s) 2400, 3001
Bst6I CTCTTC 6 cut(s) 102, 209, 2538, 2682, 3102, 3222
BstACI GRCGYC 1 cut(s) 3066
BstAFI CTTAAG 2 cut(s) 1786, 2209
BstBAI YACGTR 2 cut(s) 368, 1781
BstC8I GCNNGC 8 cut(s) 34, 195, 414, 661, 1835, 1904, 2188, 2597
BstDEI CTNAG 8 cut(s) 664, 1191, 1283, 1803, 1829, 3132, 3222, 3257
BstEII GGTNACC 1 cut(s) 1424
BstFNI CGCG 1 cut(s) 105
BstHHI GCGC 2 cut(s) 1340, 1719
BstMWI GCNNNNNNNGC 5 cut(s) 239, 330, 989, 1337, 2183
BstNI CCWGG 1 cut(s) 305
BstNSI RCATGY 3 cut(s) 1658, 2159, 2599
BstPAI GACNNNNGTC 1 cut(s) 3348
BstPI GGTNACC 1 cut(s) 1424
BstSCI CCNGG 2 cut(s) 303, 2889
BstSFI CTRYAG 1 cut(s) 2952
BstSLI GKGCMC 2 cut(s) 2199, 2997
BstUI CGCG 1 cut(s) 105
BstV1I GCAGC 4 cut(s) 151, 428, 473, 476
BstV2I GAAGAC 2 cut(s) 1142, 3035
BstX2I RGATCY 4 cut(s) 1081, 1105, 2824, 3418
BstYI RGATCY 4 cut(s) 1081, 1105, 2824, 3418
BsuI GTATCC 3 cut(s) 1603, 2866, 3373
BsuRI GGCC 6 cut(s) 620, 639, 2130, 3130, 3387, 3397
BtgZI GCGATG 1 cut(s) 2437
BtrI CACGTC 1 cut(s) 790
BtsI GCAGTG 1 cut(s) 3346
BtsIMutI CAGTG 4 cut(s) 427, 2444, 3346, 3431
BveI ACCTGC 2 cut(s) 1231, 3474
Cac8I GCNNGC 8 cut(s) 34, 195, 414, 661, 1835, 1904, 2188, 2597
CciI TCATGA 3 cut(s) 169, 1627, 1642
CfoI GCGC 2 cut(s) 1340, 1719
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 5 cut(s) 1053, 2087, 2371, 3386, 3396
CseI GACGC 2 cut(s) 3040, 3074
Csp6I GTAC 7 cut(s) 8, 703, 872, 2246, 2270, 2930, 3463
CviQI GTAC 7 cut(s) 8, 703, 872, 2246, 2270, 2930, 3463
DdeI CTNAG 8 cut(s) 664, 1191, 1283, 1803, 1829, 3132, 3222, 3257
DraI TTTAAA 1 cut(s) 3177
DriI GACNNNNNGTC 1 cut(s) 2638
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 6 cut(s) 102, 209, 2538, 2682, 3102, 3222
Eam1105I GACNNNNNGTC 1 cut(s) 2638
EarI CTCTTC 6 cut(s) 102, 209, 2538, 2682, 3102, 3222
Eco130I CCWWGG 7 cut(s) 393, 640, 984, 1013, 1934, 2647, 3375
Eco147I AGGCCT 1 cut(s) 639
Eco24I GRGCYC 3 cut(s) 2517, 2661, 2802
Eco31I GGTCTC 2 cut(s) 290, 1750
Eco32I GATATC 4 cut(s) 88, 1853, 2352, 2409
Eco47I GGWCC 3 cut(s) 1053, 2087, 2371
Eco57I CTGAAG 8 cut(s) 198, 1086, 1859, 2379, 2396, 2522, 2663, 3407
Eco88I CYCGRG 2 cut(s) 2933, 3137
Eco91I GGTNACC 1 cut(s) 1424
EcoO109I RGGNCCY 2 cut(s) 2087, 2371
EcoO65I GGTNACC 1 cut(s) 1424
EcoRI GAATTC 1 cut(s) 512
EcoRII CCWGG 1 cut(s) 303
EcoRV GATATC 4 cut(s) 88, 1853, 2352, 2409
EcoT14I CCWWGG 7 cut(s) 393, 640, 984, 1013, 1934, 2647, 3375
EcoT22I ATGCAT 1 cut(s) 1563
EcoT38I GRGCYC 3 cut(s) 2517, 2661, 2802
ErhI CCWWGG 7 cut(s) 393, 640, 984, 1013, 1934, 2647, 3375
Esp3I CGTCTC 2 cut(s) 359, 2607
FalI AAGNNNNNCTT 8 cut(s) 217, 249, 2174, 2206, 2192, 2224, 3533, 3565
FaqI GGGAC 5 cut(s) 441, 1139, 2073, 3219, 3336
FauI CCCGC 3 cut(s) 186, 474, 2098
FauNDI CATATG 2 cut(s) 781, 2872
FbaI TGATCA 2 cut(s) 70, 1974
Fnu4HI GCNGC 5 cut(s) 165, 417, 462, 465, 1161
FriOI GRGCYC 3 cut(s) 2517, 2661, 2802
Fsp4HI GCNGC 5 cut(s) 165, 417, 462, 465, 1161
GlaI GCGC 2 cut(s) 1339, 1718
GluI GCNGC 5 cut(s) 165, 417, 462, 465, 1161
GsaI CCCAGC 1 cut(s) 2025
GsuI CTGGAG 2 cut(s) 816, 821
HaeIII GGCC 6 cut(s) 620, 639, 2130, 3130, 3387, 3397
HapII CCGG 3 cut(s) 33, 2608, 2891
HgaI GACGC 2 cut(s) 3040, 3074
HhaI GCGC 2 cut(s) 1340, 1719
Hin1I GRCGYC 1 cut(s) 3066
Hin6I GCGC 2 cut(s) 1338, 1717
HinP1I GCGC 2 cut(s) 1338, 1717
HincII GTYRAC 1 cut(s) 2220
HindII GTYRAC 1 cut(s) 2220
HindIII AAGCTT 1 cut(s) 2305
HpaI GTTAAC 1 cut(s) 2220
HpaII CCGG 3 cut(s) 33, 2608, 2891
Hpy166II GTNNAC 2 cut(s) 2197, 2220
Hpy8I GTNNAC 2 cut(s) 2197, 2220
Hpy99I CGWCG 2 cut(s) 791, 3493
HpyCH4III ACNGT 2 cut(s) 2400, 3001
HpyCH4IV ACGT 4 cut(s) 367, 789, 882, 1780
HpyF10VI GCNNNNNNNGC 5 cut(s) 239, 330, 989, 1337, 2183
HpyF3I CTNAG 8 cut(s) 664, 1191, 1283, 1803, 1829, 3132, 3222, 3257
HpySE526I ACGT 4 cut(s) 367, 789, 882, 1780
Hsp92I GRCGYC 1 cut(s) 3066
HspAI GCGC 2 cut(s) 1338, 1717
Kpn2I TCCGGA 1 cut(s) 2607
KpnI GGTACC 1 cut(s) 2249
KroI GCCGGC 1 cut(s) 32
KroNI GCCGGC 1 cut(s) 34
Ksp22I TGATCA 2 cut(s) 70, 1974
KspAI GTTAAC 1 cut(s) 2220
LguI GCTCTTC 1 cut(s) 3222
LmnI GCTCC 6 cut(s) 797, 1096, 2805, 3039, 3058, 3339
Lsp1109I GCAGC 4 cut(s) 151, 428, 473, 476
MaeII ACGT 4 cut(s) 367, 789, 882, 1780
MfeI CAATTG 5 cut(s) 74, 1362, 2120, 2468, 3514
MflI RGATCY 4 cut(s) 1081, 1105, 2824, 3418
MhlI GDGCHC 5 cut(s) 2199, 2517, 2661, 2802, 2997
MlsI TGGCCA 1 cut(s) 620
MluNI TGGCCA 1 cut(s) 620
MlyI GAGTC 9 cut(s) 75, 423, 1024, 1474, 1901, 2212, 2438, 3149, 3260
MmeI TCCRAC 6 cut(s) 520, 612, 1408, 2606, 2958, 3552
Mox20I TGGCCA 1 cut(s) 620
Mph1103I ATGCAT 1 cut(s) 1563
MroI TCCGGA 1 cut(s) 2607
MroNI GCCGGC 1 cut(s) 32
MroXI GAANNNNTTC 3 cut(s) 603, 1008, 2961
MscI TGGCCA 1 cut(s) 620
MslI CAYNNNNRTG 2 cut(s) 2227, 3617
Msp20I TGGCCA 1 cut(s) 620
MspA1I CMGCKG 2 cut(s) 2357, 3556
MspCI CTTAAG 2 cut(s) 1786, 2209
MspI CCGG 3 cut(s) 33, 2608, 2891
MspR9I CCNGG 2 cut(s) 305, 2891
MunI CAATTG 5 cut(s) 74, 1362, 2120, 2468, 3514
Mva1269I GAATGC 1 cut(s) 774
MvaI CCWGG 1 cut(s) 305
MvnI CGCG 1 cut(s) 105
MwoI GCNNNNNNNGC 5 cut(s) 239, 330, 989, 1337, 2183
NaeI GCCGGC 1 cut(s) 34
NciI CCSGG 1 cut(s) 2891
NdeI CATATG 2 cut(s) 781, 2872
NgoMIV GCCGGC 1 cut(s) 32
NlaIV GGNNCC 8 cut(s) 101, 1357, 1668, 2089, 2247, 2286, 2801, 3571
NmeAIII GCCGAG 2 cut(s) 300, 411
NmuCI GTSAC 8 cut(s) 52, 790, 967, 1424, 2204, 2417, 2630, 3341
NsiI ATGCAT 1 cut(s) 1563
NspI RCATGY 3 cut(s) 1658, 2159, 2599
PaeI GCATGC 1 cut(s) 2599
PaeR7I CTCGAG 1 cut(s) 3137
PagI TCATGA 3 cut(s) 169, 1627, 1642
PceI AGGCCT 1 cut(s) 639
PciI ACATGT 2 cut(s) 1654, 2155
PciSI GCTCTTC 1 cut(s) 3222
PctI GAATGC 1 cut(s) 774
PdiI GCCGGC 1 cut(s) 34
PdmI GAANNNNTTC 3 cut(s) 603, 1008, 2961
PflMI CCANNNNNTGG 1 cut(s) 2326
PkrI GCNGC 5 cut(s) 166, 418, 463, 466, 1162
PleI GAGTC 9 cut(s) 75, 423, 1024, 1474, 1900, 2211, 2437, 3148, 3259
PpsI GAGTC 9 cut(s) 75, 423, 1024, 1474, 1900, 2211, 2437, 3148, 3259
Ppu21I YACGTR 2 cut(s) 368, 1781
PpuMI RGGWCCY 2 cut(s) 2087, 2371
PscI ACATGT 2 cut(s) 1654, 2155
PshAI GACNNNNGTC 1 cut(s) 3348
PsiI TTATAA 4 cut(s) 224, 237, 290, 2834
Psp5II RGGWCCY 2 cut(s) 2087, 2371
Psp6I CCWGG 1 cut(s) 303
PspEI GGTNACC 1 cut(s) 1424
PspFI CCCAGC 1 cut(s) 2021
PspGI CCWGG 1 cut(s) 303
PspN4I GGNNCC 8 cut(s) 101, 1357, 1668, 2089, 2247, 2286, 2801, 3571
PspPI GGNCC 5 cut(s) 1053, 2087, 2371, 3386, 3396
PspPPI RGGWCCY 2 cut(s) 2087, 2371
PspXI VCTCGAGB 1 cut(s) 3137
PsuI RGATCY 4 cut(s) 1081, 1105, 2824, 3418
PvuII CAGCTG 1 cut(s) 2357
RsaI GTAC 7 cut(s) 9, 704, 873, 2247, 2271, 2931, 3464
RsaNI GTAC 7 cut(s) 8, 703, 872, 2246, 2270, 2930, 3463
RseI CAYNNNNRTG 2 cut(s) 2227, 3617
SapI GCTCTTC 1 cut(s) 3222
SatI GCNGC 5 cut(s) 165, 417, 462, 465, 1161
Sau96I GGNCC 5 cut(s) 1053, 2087, 2371, 3386, 3396
SchI GAGTC 9 cut(s) 75, 423, 1024, 1474, 1901, 2212, 2438, 3149, 3260
ScrFI CCNGG 2 cut(s) 305, 2891
SduI GDGCHC 5 cut(s) 2199, 2517, 2661, 2802, 2997
SfcI CTRYAG 1 cut(s) 2952
Sfr274I CTCGAG 1 cut(s) 3137
SinI GGWCC 3 cut(s) 1053, 2087, 2371
SlaI CTCGAG 1 cut(s) 3137
SmiMI CAYNNNNRTG 2 cut(s) 2227, 3617
SphI GCATGC 1 cut(s) 2599
SseBI AGGCCT 1 cut(s) 639
SsiI CCGC 7 cut(s) 103, 193, 481, 1160, 2091, 3337, 3554
SspI AATATT 2 cut(s) 604, 2620
StuI AGGCCT 1 cut(s) 639
StyD4I CCNGG 2 cut(s) 303, 2889
StyI CCWWGG 7 cut(s) 393, 640, 984, 1013, 1934, 2647, 3375
TaaI ACNGT 2 cut(s) 2400, 3001
TaiI ACGT 4 cut(s) 370, 792, 885, 1783
TaqI TCGA 8 cut(s) 84, 766, 1651, 2394, 2432, 2517, 3138, 3491
TatI WGTACW 2 cut(s) 7, 871
TauI GCSGC 1 cut(s) 1163
TscAI CASTG 4 cut(s) 427, 2451, 3346, 3431
TseFI GTSAC 8 cut(s) 52, 790, 967, 1424, 2204, 2417, 2630, 3341
TseI GCWGC 4 cut(s) 164, 416, 461, 464
Tsp45I GTSAC 8 cut(s) 52, 790, 967, 1424, 2204, 2417, 2630, 3341
TspGWI ACGGA 5 cut(s) 2279, 2331, 2453, 2649, 3360
TspRI CASTG 4 cut(s) 427, 2451, 3346, 3431
Van91I CCANNNNNTGG 1 cut(s) 2326
Vha464I CTTAAG 2 cut(s) 1786, 2209
VneI GTGCAC 1 cut(s) 2195
VpaK11BI GGWCC 3 cut(s) 1053, 2087, 2371
XapI RAATTY 7 cut(s) 512, 940, 1766, 1969, 2012, 2898, 3156
XbaI TCTAGA 4 cut(s) 1024, 1108, 1855, 2411
XceI RCATGY 3 cut(s) 1658, 2159, 2599
XcmI CCANNNNNNNNNTGG 2 cut(s) 628, 1418
XhoI CTCGAG 1 cut(s) 3137
XmaJI CCTAGG 3 cut(s) 640, 1013, 2647
XmnI GAANNNNTTC 3 cut(s) 603, 1008, 2961
Zsp2I ATGCAT 1 cut(s) 1563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.